View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_303 (Length: 250)
Name: NF10855A_low_303
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_303 |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 5750390 - 5750171
Alignment:
| Q |
16 |
ctacgttaattgaccaatttaatttagagtcttcaagttcaaattagttgatttttgtgacctcttggttaatttactcatgtaataatcttggttttat |
115 |
Q |
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| T |
5750390 |
ctacgttaattgacaaatttaatttagagtcttcaagttcaaattagttgatttttgtgacctcttggttaatttactcatgtaataatcttggttttat |
5750291 |
T |
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| Q |
116 |
tatcttcgtttgttttggttagctatgttaaatactttattcttcaattttaggtgttgtgtgtatatgcatgtgcaaatggtagtatggtatatattaa |
215 |
Q |
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| T |
5750290 |
tatcttcgtttgttttggttagctatgttaaatactttattcttcaattttaggtgttgtgtgtatatgcatgtgcaaatggtagtatggtatatattaa |
5750191 |
T |
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| Q |
216 |
ttgagtccaccttgatttat |
235 |
Q |
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|||||||||||||||||||| |
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| T |
5750190 |
ttgagtccaccttgatttat |
5750171 |
T |
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