View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_448 (Length: 230)
Name: NF10855A_low_448
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_448 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 41256256 - 41256027
Alignment:
| Q |
1 |
tcattcaccaagttaaccttccacagactaaacaatctcttagcttttttcctaacatcaaaactaacataaggagaaaaaaccctcaactgctgaaaca |
100 |
Q |
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| T |
41256256 |
tcattcaccaagttaaccttccacagactaaacaatctcttagctttcttcctaacatcaaaactaacataaggagaaaaaaccctcaactgctgaaaca |
41256157 |
T |
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| Q |
101 |
aaaaattacaaattctcttattcaaacgaggtaattcctttccatcaaccactgcatttgcaccaaaaacaccatcaagtgcatcaagaaccatatctgc |
200 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41256156 |
aaaaattacaacttctcttattcaaacgaggtaattcctttccatcaaccactgcatttgcaccaaaaacaccatcaagtgcatcaagaaccatatctgc |
41256057 |
T |
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| Q |
201 |
aggatttgatgcacatttaaaagcaatctg |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
41256056 |
aggatttgatgcacatttaaaagcaatctg |
41256027 |
T |
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