View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_455 (Length: 230)
Name: NF10855A_low_455
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_455 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 44826694 - 44826923
Alignment:
| Q |
1 |
aaatgaaaattgatatacccacaatatttttcacagcaataaccattaagacgacatgtacattgctttccacacgccccctcacattcacaaggtgtat |
100 |
Q |
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| T |
44826694 |
aaatgaaaattgacatacccacaatatttttcacagcaaaaaccattaagacgacatggacattgctttccacacgccccctcacattcacaaggtgtat |
44826793 |
T |
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| Q |
101 |
agttcttttccagtttgtttttctcatcggtatttcttcttcttttccatttggatggaagtccacaagattttgaagaatatttgaacttcttagattt |
200 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44826794 |
agtgcttttccagtttgtttttctcatcggtatttcttcttcttttccatttggatggaagtccacaagattttgaagaatatttgaacttcttagattt |
44826893 |
T |
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| Q |
201 |
gctctttcttgacatcgaccttgactttga |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
44826894 |
gctctttcttgacatcgaccttgactttga |
44826923 |
T |
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