View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_582 (Length: 203)
Name: NF10855A_low_582
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_582 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 40225582 - 40225399
Alignment:
| Q |
20 |
tatacccttatcctttcatctctgttcccttcttccattacaaaaattcattgaagcttggttaagaaatagctttgtcttttcaccatcattctctcat |
119 |
Q |
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| T |
40225582 |
tatacccttatcctttcatctctgttcccttcttccattacaaaaattcattgaagcttggttaagaaatagctttgtcttttcaccatcattctctcat |
40225483 |
T |
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| Q |
120 |
taaactcaaaccttacgttacgcccacgttcttggtcaatttttgtaagtaattttttcctccacttatatatttggtgctata |
203 |
Q |
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| T |
40225482 |
taaactcaaaccttacgttacgcccacgttcttggtcaatttttgtaagtaattttttcctccacttatatatttggtgctata |
40225399 |
T |
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