View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10855A_low_92 (Length: 367)
Name: NF10855A_low_92
Description: NF10855A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10855A_low_92 |
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Alignment Details
Target: chr4 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 361
Target Start/End: Complemental strand, 21832103 - 21831747
Alignment:
| Q |
1 |
aaatatatatttgtcggtgtttgctcatattgattatatgtagtctttggtgtgactaatccaaccatatgttaacatgttccaaatgatactaatagga |
100 |
Q |
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| T |
21832103 |
aaatatatatttgtcggtgtttgctcatatcgattatatgtagtgtttggtgtgactaatccaaccatatgttaacatgttctaaatgatactaatagga |
21832004 |
T |
|
| Q |
101 |
tgcataatttcatgataatcagcattcgtctcttacatcaaatatggtatcaacaaaacaagttcatcttatagagatctcatcaaccacatggagttcg |
200 |
Q |
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| T |
21832003 |
tgcataatttcatgataatcagcattcgtctcttacaccaaatatggtatcaacaaaacaagttcatcttatagagatctcatcaaccacatggagttcg |
21831904 |
T |
|
| Q |
201 |
aacttgaaataacctgaaaatacatttaaaataagcnnnnnnnnnnnnnnnnnctttgtagaccgataaaaacatcaatgaggacattagatctcaaaca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21831903 |
aacttgaaataacctgaaaatacatttaaaataagc----aaaaaaaaaaaaactttgtagaccgataaaaacatcaatgaggacattagatctcaaaca |
21831808 |
T |
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| Q |
301 |
tggtattaatggagtgatcaaataccacgatcgctttcgaggagggcacttggataccaag |
361 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
21831807 |
tggtattaatggagtgatcaaataccacgatggctttcgaggagggcacttggataccaag |
21831747 |
T |
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