View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10856_low_10 (Length: 218)

Name: NF10856_low_10
Description: NF10856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10856_low_10
NF10856_low_10
[»] chr7 (52 HSPs)
chr7 (1-200)||(14156506-14156705)
chr7 (1-200)||(10500848-10501047)
chr7 (1-116)||(26355686-26355801)
chr7 (1-116)||(26358138-26358253)
chr7 (1-116)||(14269661-14269776)
chr7 (1-116)||(32125833-32125948)
chr7 (1-115)||(23664658-23664772)
chr7 (4-116)||(15081546-15081658)
chr7 (1-116)||(14948827-14948942)
chr7 (1-116)||(15376418-15376533)
chr7 (5-116)||(16214031-16214142)
chr7 (1-116)||(16410401-16410516)
chr7 (1-116)||(20384828-20384943)
chr7 (1-116)||(27217203-27217318)
chr7 (1-116)||(41523260-41523375)
chr7 (1-116)||(41525722-41525837)
chr7 (1-115)||(11303590-11303704)
chr7 (1-116)||(456664-456779)
chr7 (1-116)||(16232863-16232978)
chr7 (4-115)||(29796956-29797067)
chr7 (4-115)||(29800775-29800886)
chr7 (1-111)||(13869691-13869801)
chr7 (13-115)||(14269276-14269378)
chr7 (1-161)||(8469078-8469241)
chr7 (1-116)||(10501098-10501213)
chr7 (5-116)||(14269468-14269579)
chr7 (1-116)||(18431054-18431169)
chr7 (1-116)||(24702571-24702686)
chr7 (1-116)||(24705018-24705133)
chr7 (1-116)||(14156783-14156894)
chr7 (5-115)||(16108394-16108504)
chr7 (5-161)||(16214224-16214383)
chr7 (5-161)||(38897691-38897850)
chr7 (1-116)||(18627908-18628023)
chr7 (1-116)||(18640614-18640729)
chr7 (5-116)||(25926834-25926945)
chr7 (1-116)||(8940622-8940741)
chr7 (1-161)||(11972891-11973054)
chr7 (1-114)||(21189302-21189415)
chr7 (5-116)||(8940823-8940933)
chr7 (17-116)||(8941028-8941127)
chr7 (5-116)||(45847359-45847470)
chr7 (5-116)||(1856934-1857044)
chr7 (5-161)||(15081305-15081464)
chr7 (5-116)||(13918107-13918219)
chr7 (5-116)||(21189107-21189218)
chr7 (1-63)||(11393044-11393106)
chr7 (13-113)||(17985092-17985192)
chr7 (1-46)||(13841397-13841442)
chr7 (36-116)||(11310133-11310212)
chr7 (48-116)||(23461796-23461864)
chr7 (80-116)||(11393004-11393040)
[»] chr3 (60 HSPs)
chr3 (1-158)||(12119313-12119473)
chr3 (1-116)||(20629896-20630011)
chr3 (1-116)||(53301208-53301323)
chr3 (1-116)||(8499863-8499978)
chr3 (1-115)||(54521165-54521279)
chr3 (1-116)||(7781051-7781166)
chr3 (1-116)||(13544366-13544481)
chr3 (1-116)||(17463520-17463635)
chr3 (1-116)||(34159668-34159783)
chr3 (1-116)||(45606611-45606726)
chr3 (5-161)||(8500060-8500219)
chr3 (4-116)||(15977878-15977990)
chr3 (5-116)||(10247428-10247539)
chr3 (5-116)||(12567906-12568017)
chr3 (5-116)||(16453985-16454096)
chr3 (1-116)||(17444468-17444583)
chr3 (5-116)||(27165792-27165903)
chr3 (1-116)||(28848326-28848441)
chr3 (4-115)||(29544547-29544658)
chr3 (1-116)||(41124282-41124397)
chr3 (1-116)||(55476833-55476948)
chr3 (1-111)||(15412774-15412884)
chr3 (1-116)||(10557251-10557366)
chr3 (1-116)||(13153960-13154075)
chr3 (1-112)||(13436642-13436753)
chr3 (1-116)||(16282462-16282577)
chr3 (1-112)||(27165595-27165706)
chr3 (1-112)||(46822604-46822715)
chr3 (5-161)||(24514023-24514182)
chr3 (5-161)||(41124479-41124638)
chr3 (5-114)||(55319010-55319119)
chr3 (4-116)||(6468839-6468951)
chr3 (1-116)||(38961542-38961658)
chr3 (5-116)||(10379674-10379785)
chr3 (1-116)||(13151495-13151610)
chr3 (12-161)||(20629655-20629807)
chr3 (5-161)||(53300967-53301126)
chr3 (5-116)||(5223730-5223841)
chr3 (5-116)||(15465501-15465612)
chr3 (5-161)||(38961301-38961460)
chr3 (5-161)||(46822801-46822960)
chr3 (5-161)||(55318767-55318926)
chr3 (17-116)||(10557460-10557559)
chr3 (1-116)||(25229599-25229714)
chr3 (1-116)||(25237186-25237301)
chr3 (5-116)||(26054969-26055080)
chr3 (5-115)||(13937485-13937595)
chr3 (30-116)||(16358372-16358458)
chr3 (5-95)||(17393255-17393345)
chr3 (36-116)||(36528340-36528420)
chr3 (17-116)||(17444275-17444374)
chr3 (26-161)||(16282221-16282359)
chr3 (27-116)||(15007868-15007960)
chr3 (1-82)||(14567430-14567511)
chr3 (67-115)||(12305531-12305579)
chr3 (1-57)||(16358238-16358294)
chr3 (12-63)||(36528509-36528560)
chr3 (67-116)||(8899434-8899483)
chr3 (75-116)||(14567589-14567630)
chr3 (84-116)||(13937677-13937709)
[»] chr8 (44 HSPs)
chr8 (1-117)||(45290251-45290367)
chr8 (5-116)||(24048957-24049068)
chr8 (5-161)||(15071100-15071259)
chr8 (4-116)||(15202883-15202995)
chr8 (1-116)||(1484744-1484859)
chr8 (1-116)||(5852997-5853112)
chr8 (1-116)||(14409149-14409264)
chr8 (1-116)||(14824117-14824232)
chr8 (5-116)||(16198241-16198352)
chr8 (5-116)||(19896861-19896972)
chr8 (1-116)||(20045900-20046015)
chr8 (5-116)||(24485748-24485859)
chr8 (17-161)||(32122280-32122427)
chr8 (4-116)||(15202690-15202802)
chr8 (4-116)||(18677769-18677881)
chr8 (5-116)||(14397445-14397556)
chr8 (5-116)||(15070907-15071018)
chr8 (5-116)||(15202497-15202608)
chr8 (5-116)||(16413020-16413131)
chr8 (1-116)||(19936612-19936727)
chr8 (1-116)||(20403815-20403930)
chr8 (5-116)||(38549709-38549820)
chr8 (1-111)||(4483623-4483733)
chr8 (5-161)||(27471880-27472039)
chr8 (5-116)||(4542078-4542189)
chr8 (1-116)||(16401629-16401744)
chr8 (17-161)||(19936372-19936518)
chr8 (1-116)||(20403622-20403737)
chr8 (1-112)||(27472125-27472236)
chr8 (5-116)||(38549516-38549627)
chr8 (17-161)||(16412778-16412926)
chr8 (5-161)||(38549276-38549435)
chr8 (4-116)||(22002098-22002210)
chr8 (5-116)||(16401244-16401354)
chr8 (5-116)||(32122075-32122186)
chr8 (5-115)||(16401437-16401547)
chr8 (5-161)||(24049150-24049309)
chr8 (5-116)||(11361056-11361167)
chr8 (5-161)||(19897054-19897213)
chr8 (1-77)||(45290385-45290461)
chr8 (1-116)||(19896664-19896779)
chr8 (5-161)||(1326588-1326747)
chr8 (26-161)||(32810264-32810402)
chr8 (1-81)||(25657892-25657972)
[»] scaffold0574 (2 HSPs)
scaffold0574 (1-116)||(6794-6909)
scaffold0574 (5-161)||(6991-7150)
[»] chr6 (47 HSPs)
chr6 (1-116)||(1598399-1598514)
chr6 (1-116)||(2290885-2291000)
chr6 (5-161)||(34963720-34963879)
chr6 (1-116)||(15892113-15892228)
chr6 (1-116)||(18334297-18334412)
chr6 (1-116)||(24422889-24423004)
chr6 (5-116)||(30676414-30676525)
chr6 (1-116)||(33862136-33862251)
chr6 (1-116)||(33864620-33864735)
chr6 (1-115)||(28289042-28289156)
chr6 (1-116)||(8055372-8055487)
chr6 (1-116)||(12742660-12742775)
chr6 (1-116)||(19005494-19005609)
chr6 (5-116)||(25535754-25535865)
chr6 (5-116)||(26924345-26924456)
chr6 (1-116)||(1540616-1540731)
chr6 (1-116)||(25688845-25688960)
chr6 (17-116)||(25689054-25689153)
chr6 (1-116)||(31630245-31630360)
chr6 (5-161)||(19005691-19005850)
chr6 (5-116)||(1598596-1598707)
chr6 (5-116)||(30676221-30676332)
chr6 (1-116)||(19858627-19858739)
chr6 (1-116)||(18914275-18914390)
chr6 (5-116)||(23415311-23415422)
chr6 (13-115)||(17883203-17883305)
chr6 (5-114)||(1871-1980)
chr6 (5-114)||(8830-8939)
chr6 (5-161)||(19847435-19847594)
chr6 (4-92)||(17377576-17377664)
chr6 (4-116)||(22782572-22782684)
chr6 (17-116)||(18914484-18914583)
chr6 (12-161)||(1598796-1598948)
chr6 (1-116)||(19847676-19847787)
chr6 (5-161)||(31630004-31630163)
chr6 (12-116)||(27557076-27557180)
chr6 (5-161)||(18914665-18914824)
chr6 (5-161)||(23992769-23992928)
chr6 (5-116)||(26924152-26924263)
chr6 (48-116)||(25737032-25737100)
chr6 (5-114)||(79-188)
chr6 (49-115)||(12942580-12942646)
chr6 (5-63)||(25737182-25737240)
chr6 (74-116)||(22981444-22981486)
chr6 (74-116)||(23806922-23806964)
chr6 (67-116)||(9021-9070)
chr6 (5-83)||(25689235-25689313)
[»] chr4 (42 HSPs)
chr4 (5-116)||(3515354-3515465)
chr4 (1-115)||(15534524-15534638)
chr4 (1-115)||(36038213-36038327)
chr4 (5-161)||(14970170-14970329)
chr4 (1-115)||(49547479-49547593)
chr4 (5-116)||(14970411-14970522)
chr4 (1-116)||(15118057-15118172)
chr4 (1-116)||(50222044-50222159)
chr4 (1-116)||(52312904-52313019)
chr4 (1-116)||(52872777-52872892)
chr4 (1-115)||(19617772-19617886)
chr4 (5-116)||(362720-362831)
chr4 (1-116)||(29267696-29267811)
chr4 (1-161)||(11911-12074)
chr4 (5-161)||(52872536-52872695)
chr4 (1-116)||(1837224-1837339)
chr4 (1-116)||(7640891-7641006)
chr4 (15-114)||(15495880-15495979)
chr4 (5-116)||(19858118-19858229)
chr4 (5-161)||(18214667-18214826)
chr4 (5-109)||(19857925-19858029)
chr4 (1-116)||(14746216-14746331)
chr4 (5-116)||(14746023-14746134)
chr4 (1-116)||(44615631-44615746)
chr4 (5-116)||(44772788-44772899)
chr4 (5-115)||(362527-362637)
chr4 (1-115)||(14048920-14049034)
chr4 (17-161)||(3515559-3515706)
chr4 (17-116)||(19617578-19617677)
chr4 (5-116)||(52313101-52313212)
chr4 (30-116)||(14185507-14185593)
chr4 (5-116)||(19243047-19243158)
chr4 (5-116)||(52313294-52313405)
chr4 (5-161)||(362913-363072)
chr4 (5-85)||(15495716-15495796)
chr4 (1-57)||(14185671-14185727)
chr4 (43-116)||(12778387-12778460)
chr4 (67-116)||(18214908-18214957)
chr4 (40-116)||(30147297-30147373)
chr4 (67-161)||(15489612-15489709)
chr4 (71-114)||(22725431-22725474)
chr4 (76-161)||(15354981-15355069)
[»] chr2 (55 HSPs)
chr2 (1-116)||(23706921-23707036)
chr2 (1-115)||(20261562-20261676)
chr2 (1-116)||(18809285-18809400)
chr2 (5-116)||(22105812-22105923)
chr2 (1-116)||(23709237-23709352)
chr2 (1-116)||(23711718-23711833)
chr2 (1-116)||(23931803-23931918)
chr2 (5-116)||(24368173-24368284)
chr2 (1-116)||(28577441-28577556)
chr2 (1-116)||(39682656-39682771)
chr2 (1-116)||(45027609-45027724)
chr2 (1-115)||(10684468-10684582)
chr2 (1-116)||(23135922-23136037)
chr2 (1-116)||(24642453-24642568)
chr2 (5-116)||(32214635-32214746)
chr2 (1-111)||(23131205-23131315)
chr2 (1-111)||(23133672-23133782)
chr2 (1-111)||(34402231-34402341)
chr2 (17-161)||(22106017-22106164)
chr2 (1-114)||(24529253-24529366)
chr2 (5-161)||(32214393-32214552)
chr2 (4-117)||(38967825-38967938)
chr2 (4-116)||(26505724-26505836)
chr2 (4-116)||(26508202-26508314)
chr2 (1-116)||(571740-571855)
chr2 (5-116)||(21154712-21154823)
chr2 (1-116)||(24897900-24898015)
chr2 (1-116)||(24900383-24900498)
chr2 (1-116)||(24902860-24902975)
chr2 (1-116)||(24905337-24905452)
chr2 (1-116)||(24918483-24918598)
chr2 (5-116)||(41523584-41523695)
chr2 (1-116)||(41523777-41523892)
chr2 (1-116)||(6726390-6726505)
chr2 (1-116)||(24671368-24671483)
chr2 (1-116)||(24907812-24907927)
chr2 (5-161)||(23932000-23932159)
chr2 (5-116)||(21154519-21154630)
chr2 (1-116)||(32039203-32039318)
chr2 (1-115)||(24681787-24681901)
chr2 (5-115)||(24918680-24918790)
chr2 (17-161)||(24368378-24368525)
chr2 (5-161)||(24681984-24682143)
chr2 (26-148)||(23706502-23706627)
chr2 (5-116)||(24529058-24529169)
chr2 (5-161)||(6726587-6726746)
chr2 (17-161)||(21154278-21154425)
chr2 (5-161)||(24671565-24671724)
chr2 (5-161)||(41523343-41523502)
chr2 (5-116)||(23706729-23706840)
chr2 (5-112)||(23709048-23709155)
chr2 (5-114)||(45027418-45027527)
chr2 (49-116)||(31345570-31345637)
chr2 (5-57)||(25616528-25616580)
chr2 (9-57)||(34135071-34135119)
[»] chr5 (32 HSPs)
chr5 (1-115)||(17516869-17516983)
chr5 (1-116)||(264473-264588)
chr5 (1-116)||(2154336-2154451)
chr5 (1-116)||(20917551-20917666)
chr5 (1-116)||(29330325-29330440)
chr5 (1-116)||(10732645-10732760)
chr5 (1-112)||(20901629-20901740)
chr5 (1-116)||(20909354-20909469)
chr5 (5-116)||(29346326-29346437)
chr5 (1-116)||(32027788-32027903)
chr5 (1-111)||(38619779-38619889)
chr5 (1-114)||(37804609-37804722)
chr5 (1-116)||(23064856-23064971)
chr5 (5-116)||(29348799-29348910)
chr5 (5-116)||(29351272-29351383)
chr5 (1-116)||(39245478-39245593)
chr5 (17-161)||(17516433-17516581)
chr5 (5-161)||(20901384-20901543)
chr5 (5-116)||(295979-296090)
chr5 (1-116)||(42245070-42245185)
chr5 (5-111)||(39363731-39363837)
chr5 (5-161)||(29330522-29330681)
chr5 (5-161)||(2154095-2154254)
chr5 (15-116)||(32028189-32028290)
chr5 (5-161)||(32028565-32028724)
chr5 (5-116)||(32028372-32028483)
chr5 (17-116)||(32027997-32028096)
chr5 (5-108)||(17516683-17516786)
chr5 (5-161)||(295738-295897)
chr5 (5-161)||(20917310-20917469)
chr5 (1-81)||(9776701-9776781)
chr5 (31-63)||(23280299-23280331)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-116)||(40742-40857)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-116)||(94753-94868)
scaffold0023 (17-161)||(16903-17050)
scaffold0023 (5-116)||(17144-17255)
[»] scaffold0278 (3 HSPs)
scaffold0278 (1-115)||(8082-8196)
scaffold0278 (5-116)||(8279-8390)
scaffold0278 (5-161)||(8472-8631)
[»] scaffold0695 (1 HSPs)
scaffold0695 (1-116)||(6289-6404)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-116)||(13735-13850)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-116)||(38164-38279)
[»] chr1 (31 HSPs)
chr1 (1-116)||(13989208-13989323)
chr1 (5-116)||(21841113-21841224)
chr1 (1-116)||(21922996-21923111)
chr1 (4-116)||(15859713-15859825)
chr1 (1-117)||(29298584-29298700)
chr1 (26-161)||(43543269-43543407)
chr1 (1-116)||(13227206-13227321)
chr1 (1-116)||(16362261-16362376)
chr1 (12-115)||(29777287-29777390)
chr1 (28-116)||(16401484-16401572)
chr1 (1-116)||(21474791-21474906)
chr1 (5-116)||(22122719-22122830)
chr1 (1-116)||(29777083-29777198)
chr1 (1-116)||(31612708-31612823)
chr1 (5-161)||(22122477-22122637)
chr1 (5-115)||(27161292-27161402)
chr1 (5-116)||(15859507-15859618)
chr1 (4-116)||(29535397-29535509)
chr1 (17-114)||(9044711-9044808)
chr1 (5-116)||(29298781-29298892)
chr1 (5-115)||(31612905-31613015)
chr1 (5-161)||(31613098-31613257)
chr1 (1-116)||(16274960-16275076)
chr1 (26-161)||(22050493-22050631)
chr1 (5-116)||(16274767-16274878)
chr1 (5-112)||(23593442-23593549)
chr1 (5-96)||(27161118-27161209)
chr1 (17-116)||(40129443-40129542)
chr1 (10-116)||(10812710-10812816)
chr1 (67-161)||(43630245-43630342)
chr1 (75-116)||(16401338-16401379)
[»] scaffold0200 (1 HSPs)
scaffold0200 (5-115)||(18000-18110)
[»] scaffold0322 (1 HSPs)
scaffold0322 (5-161)||(18477-18636)
[»] scaffold1792 (2 HSPs)
scaffold1792 (5-116)||(907-1018)
scaffold1792 (5-114)||(554-663)
[»] scaffold0747 (3 HSPs)
scaffold0747 (5-116)||(936-1047)
scaffold0747 (17-100)||(1141-1224)
scaffold0747 (28-161)||(1271-1407)
[»] scaffold0230 (4 HSPs)
scaffold0230 (5-116)||(22882-22993)
scaffold0230 (1-116)||(14290-14405)
scaffold0230 (5-114)||(23237-23346)
scaffold0230 (66-161)||(20667-20765)
[»] scaffold0149 (2 HSPs)
scaffold0149 (1-112)||(30362-30473)
scaffold0149 (5-116)||(30559-30670)
[»] scaffold0711 (2 HSPs)
scaffold0711 (5-117)||(7394-7505)
scaffold0711 (5-116)||(7202-7313)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-116)||(21090-21206)
[»] scaffold0741 (3 HSPs)
scaffold0741 (1-116)||(4007-4122)
scaffold0741 (17-116)||(3814-3913)
scaffold0741 (17-116)||(3621-3720)
[»] scaffold0716 (2 HSPs)
scaffold0716 (5-116)||(5041-5152)
scaffold0716 (5-161)||(5234-5393)
[»] scaffold0363 (1 HSPs)
scaffold0363 (5-116)||(9588-9699)
[»] scaffold1296 (2 HSPs)
scaffold1296 (1-115)||(1790-1904)
scaffold1296 (38-116)||(1634-1712)
[»] scaffold0422 (1 HSPs)
scaffold0422 (1-115)||(3366-3480)
[»] scaffold0043 (3 HSPs)
scaffold0043 (1-115)||(10134-10248)
scaffold0043 (5-114)||(10524-10633)
scaffold0043 (5-115)||(10331-10441)
[»] scaffold0040 (3 HSPs)
scaffold0040 (3-116)||(43084-43197)
scaffold0040 (5-116)||(43279-43390)
scaffold0040 (1-63)||(13384-13446)
[»] scaffold0494 (1 HSPs)
scaffold0494 (5-116)||(228-339)
[»] scaffold0293 (1 HSPs)
scaffold0293 (5-116)||(19793-19904)
[»] scaffold0138 (1 HSPs)
scaffold0138 (12-115)||(33525-33628)
[»] scaffold0117 (1 HSPs)
scaffold0117 (17-116)||(39691-39790)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-116)||(68304-68419)
[»] scaffold0028 (5 HSPs)
scaffold0028 (1-116)||(134553-134668)
scaffold0028 (1-116)||(137022-137137)
scaffold0028 (1-116)||(139491-139606)
scaffold0028 (1-116)||(141960-142075)
scaffold0028 (1-116)||(144429-144544)
[»] scaffold0074 (1 HSPs)
scaffold0074 (5-161)||(38312-38471)
[»] scaffold0436 (1 HSPs)
scaffold0436 (1-116)||(8361-8476)
[»] scaffold0051 (1 HSPs)
scaffold0051 (5-116)||(31550-31661)
[»] scaffold0029 (1 HSPs)
scaffold0029 (5-115)||(11636-11746)
[»] scaffold0001 (2 HSPs)
scaffold0001 (17-161)||(501616-501763)
scaffold0001 (5-116)||(501412-501522)
[»] scaffold0317 (2 HSPs)
scaffold0317 (17-116)||(6640-6739)
scaffold0317 (5-116)||(6447-6558)
[»] scaffold0306 (4 HSPs)
scaffold0306 (17-116)||(11044-11143)
scaffold0306 (5-161)||(15452-15610)
scaffold0306 (5-115)||(10852-10962)
scaffold0306 (5-87)||(15269-15351)
[»] scaffold1427 (1 HSPs)
scaffold1427 (1-57)||(1771-1827)
[»] scaffold0042 (1 HSPs)
scaffold0042 (36-116)||(75609-75689)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-80)||(53612-53691)
[»] scaffold0021 (1 HSPs)
scaffold0021 (37-116)||(398-477)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-116)||(113363-113474)
[»] scaffold0151 (2 HSPs)
scaffold0151 (5-63)||(36956-37014)
scaffold0151 (5-77)||(36749-36821)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-42)||(57824-57865)


Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 14156705 - 14156506
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  14156705 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgttatcacctaagaccaattctgtaccgatcaataccagt 14156606  T
Q  101 ttttatttcaaattcgagacagaaataagaaaaatcaggaaaaacaacttatgttattcaaacttcacaattgacaacaaagtaacataatccatcaatt 200  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14156605 ttttgtttcaaatttgagacagaaataagaaaaatcaggaaaaacaacttatattattcaaacttcacaattgacaacaaagtaacataatccatcaatt 14156506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 10501047 - 10500848
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||||    
T  10501047 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcatgttatcacctaagaccaattctgtaccgatcaataccagt 10500948  T
Q  101 ttttatttcaaattcgagacagaaataagaaaaatcaggaaaaacaacttatgttattcaaacttcacaattgacaacaaagtaacataatccatcaatt 200  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10500947 ttttgtttcaaattagagacagaaataagaaaaatcaggaaaaacaacttatattattcaaacttcacaattgacaacaaagtaacataatccatcaatt 10500848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26355801 - 26355686
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| ||||||  || |||||||||||||||||| ||||||||||||    
T  26355801 atccttttgaagtcaaaccaacggaattagaaagctaacattcatacctacaactttcgtgttaacacataagaccaattctgtaccaatcaataccagt 26355702  T
Q  101 ttttatttcaaattcg 116  Q
    ||||||||||||||||    
T  26355701 ttttatttcaaattcg 26355686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26358253 - 26358138
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| ||||||  || |||||||||||||||||| ||||||||||||    
T  26358253 atccttttgaagtcaaaccaacggaattagaaagctaacattcatacctacaactttcgtgttaacacataagaccaattctgtaccaatcaataccagt 26358154  T
Q  101 ttttatttcaaattcg 116  Q
    ||||||||||||||||    
T  26358153 ttttatttcaaattcg 26358138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14269776 - 14269661
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  14269776 atccttttgaagtcgaaccaacggaattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 14269677  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  14269676 tttcatttcaaattcg 14269661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32125833 - 32125948
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  32125833 atccttttgaagtcaaaccaacggtattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 32125932  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  32125933 tttcatttcaaattcg 32125948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 23664772 - 23664658
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| |||||||||| |    
T  23664772 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccatt 23664673  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  23664672 tttcatttcaaattc 23664658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 15081658 - 15081546
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||   ||||||||||||||||||||| ||||||| |||||||    
T  15081658 cttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaatatcagtttt 15081559  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  15081558 catttcaaattcg 15081546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14948942 - 14948827
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  14948942 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 14948843  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  14948842 tttcatttcaaattcg 14948827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 15376533 - 15376418
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  15376533 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 15376434  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  15376433 tttcatttcaaattcg 15376418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 16214031 - 16214142
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||   || |||||||||||||||| | |||||||||||||||     
T  16214031 ttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaacttttgtgtttacacgtaagaccaattctgtatcaatcaataccagttttc 16214130  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  16214131 atttcaaattcg 16214142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16410401 - 16410516
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  16410401 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 16410500  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  16410501 tttcatttcaaattcg 16410516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20384943 - 20384828
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  20384943 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 20384844  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  20384843 tttcatttcaaattcg 20384828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 27217203 - 27217318
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  27217203 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 27217302  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  27217303 tttcatttcaaattcg 27217318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41523260 - 41523375
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| ||||||||||| ||||   ||||||||||||||||||||| ||||||||||||    
T  41523260 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaacttttatgtttacacctaagaccaattctgtaccaatcaataccagt 41523359  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  41523360 tttcatttcaaattcg 41523375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41525722 - 41525837
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| ||||||||||| ||||   ||||||||||||||||||||| ||||||||||||    
T  41525722 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaacttttatgtttacacctaagaccaattctgtaccaatcaataccagt 41525821  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  41525822 tttcatttcaaattcg 41525837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 11303590 - 11303704
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   | |||||||||||| |||||| ||||||||||||    
T  11303590 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacatctaagaccaattatgtaccaatcaataccagt 11303689  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  11303690 tttcatttcaaattc 11303704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 456664 - 456779
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||| ||    
T  456664 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccggt 456763  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  456764 tttcatttcaaattcg 456779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16232863 - 16232978
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||| |||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  16232863 atccttttgaattcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 16232962  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  16232963 tttcatttcaaattcg 16232978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 29796956 - 29797067
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |   ||||||||||||||||||| | |||||||||||||||    
T  29796956 cttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgcttacacctaagaccaattctgtatcaatcaataccagtttt 29797055  T
Q  104 tatttcaaattc 115  Q
     |||||||||||    
T  29797056 catttcaaattc 29797067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 29800775 - 29800886
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |   ||||||||||||||||||| | |||||||||||||||    
T  29800775 cttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgcttacacctaagaccaattctgtatcaatcaataccagtttt 29800874  T
Q  104 tatttcaaattc 115  Q
     |||||||||||    
T  29800875 catttcaaattc 29800886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 13869691 - 13869801
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  13869691 atccttttgaagtcaaaccaacggcactagaaagctaacatccatacctacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagt 13869790  T
Q  101 ttttatttcaa 111  Q
    ||| |||||||    
T  13869791 tttcatttcaa 13869801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 14269378 - 14269276
Alignment:
Q  13 tcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaa 112  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  14269378 tcaaaccaacggaattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagatttcatttcaaa 14269279  T
Q  113 ttc 115  Q
    |||    
T  14269278 ttc 14269276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 8469078 - 8469241
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  |||||||| |||||||| ||| |||||||||| |||||   | ||||||||||||||| ||| |||||||||||     
T  8469078 atccttttgaagtcaaaccaacgtcattagaaaactaacatctatacctacaactttcgtgtttacagctaagaccaattctggacctatcaataccaga 8469177  T
Q  101 ttttatttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    ||| |||||||||||| | |||| ||   |||||||||||| |||| |||||||| ||||||||    
T  8469178 tttcatttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacttatattattcaa 8469241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10501213 - 10501098
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||| ||||||||||||||||||  |||||||| |||||||||||| ||||||||||||||||   |||||||||||| |||||| | ||||||||||||    
T  10501213 atccatttgaagtcaaaccaacgacattagaaatctaacatccatacctacaacttttgtgtttacacctaagaccaactctgtatcaatcaataccagt 10501114  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  10501113 tttcatttcaaattcg 10501098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 14269579 - 14269468
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  14269579 ttttgacgtcataccaaaggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 14269480  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  14269479 atttcaaattcg 14269468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18431054 - 18431169
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||| |||| || |||| |||||||||| |||||   ||||||||||| ||||||||| ||||||||||||    
T  18431054 atccttttgaagtcaaaccaacggcattagaaacctaagattcatacctacaactttcgtgtttacacctaagaccagttctgtaccaatcaataccagt 18431153  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  18431154 tttcatttcaaattcg 18431169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24702571 - 24702686
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| ||||||| || |||||   ||||||||||||||||||||| | ||||||||||    
T  24702571 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaaccttcgtgtttacacctaagaccaattctgtaccaaccaataccagt 24702670  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  24702671 tttcatttcaaattcg 24702686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24705018 - 24705133
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| ||||||| || |||||   ||||||||||||||||||||| | ||||||||||    
T  24705018 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaaccttcgtgtttacacctaagaccaattctgtaccaaccaataccagt 24705117  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  24705118 tttcatttcaaattcg 24705133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14156894 - 14156783
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  |||||||||||||||| |||| |||||||||| ||||    |||||||||||||| |||||| ||||||||||||    
T  14156894 atccttttgaagtcaaaccaacgacattagaaagctaacattcatacctacaactttagtgt----acctaagaccaattttgtaccaatcaataccagt 14156799  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  14156798 tttcatttcaaattcg 14156783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 16108504 - 16108394
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||| | |||||||| |||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||||||     
T  16108504 ttttgaagtcaaaccaacagcattagaaaactaacatccatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttc 16108405  T
Q  105 atttcaaattc 115  Q
    |||||||||||    
T  16108404 atttcaaattc 16108394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 16214224 - 16214383
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| ||||||| ||||||||   ||||||||||||||||| ||| ||||||||||  |||     
T  16214224 ttttgacgtcataccaacggcattagaaagctaacatccatacctacaacctttgtgtttacacctaagaccaattctggacctatcaataccaaatttc 16214323  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  16214324 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 16214383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 38897850 - 38897691
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| | |||   ||||||||||||||||| ||| ||||||||||| |||     
T  38897850 ttttgacgtcaaaccaacggcattagaaagctaacatccatacctacaactttcgagtttacacctaagaccaattctggacctatcaataccagatttc 38897751  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||| | | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  38897750 atttcaaatttggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 38897691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18627908 - 18628023
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   |||||||||||||||||| || ||||||| ||||    
T  18627908 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtgccaatcaatatcagt 18628007  T
Q  101 ttttatttcaaattcg 116  Q
    ||| |||| |||||||    
T  18628008 tttcattttaaattcg 18628023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18640614 - 18640729
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||| |||||||||||  ||| |||||||||| |||||   |||||||||||||||||| || ||||||| ||||    
T  18640614 atccttttgaagtcaaaccaacggcattataaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtgccaatcaatatcagt 18640713  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  18640714 tttcatttcaaattcg 18640729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 25926945 - 25926834
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || ||||||||||||| ||||||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  25926945 ttttgacgtcagaccaatggcattagaaagctaatatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 25926846  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  25926845 atttcaaattcg 25926834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8940622 - 8940741
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttt----tgtgttataacctaagaccaattctgtaccgatcaatac 96  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||    ||||||   |||||||||||||| |||||| |||||||     
T  8940622 atccttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtgtgtttacacctaagaccaattttgtaccaatcaatag 8940721  T
Q  97 cagtttttatttcaaattcg 116  Q
    ||||||| ||||||||||||    
T  8940722 cagttttcatttcaaattcg 8940741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 11972891 - 11973054
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||| ||||||| ||| |||||||||||     
T  11972891 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagacaaattctggacctatcaataccaga 11972990  T
Q  101 ttttatttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    ||| |||| || |||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  11972991 tttcattttaagttcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 11973054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21189415 - 21189302
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||| ||||||||||  ||||   |||||||||||| |||||||| || |||||||||    
T  21189415 atccttttgaagtcaaaccaacggcattaaaaagctaacattcatacctacaactttcttgtttacacctaagaccaactctgtaccaataaataccagt 21189316  T
Q  101 ttttatttcaaatt 114  Q
    ||| ||||||||||    
T  21189315 tttcatttcaaatt 21189302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 8940823 - 8940933
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| ||||||||||| ||||   |||||||||||||| |||| | |||||||||||||||     
T  8940823 ttttgacgtcagaccaacggcattagaaagctaacatccatacctacaactttt-tgtttacacctaagaccaattatgtatcaatcaataccagttttc 8940921  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  8940922 atttcaaattcg 8940933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 8941028 - 8941127
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||| ||| ||||||||||| ||| ||||||||||||    
T  8941028 accaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagatttcatttcaaattcg 8941127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 45847470 - 45847359
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||| ||| |  |||||||||||||||||||| ||||||||||||||||   |||||||||||||| |||||| |||||||  | ||||     
T  45847470 ttttgaagtcaaactaacagagttagaaagctaacatccatacctacaacttttgtgtttatacctaagaccaattttgtaccaatcaatattatttttc 45847371  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  45847370 atttcaaattcg 45847359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 1857044 - 1856934
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| |  |||||||||||||||| |||| |||||||||  |||||   ||||||||||||||| ||||| ||||||||||||||||    
T  1857044 ttttgacgtcagaccaatgacattagaaagctaacattcatacctacaacttc-gtgtttacacctaagaccaattcggtaccaatcaataccagttttt 1856946  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  1856945 atttcaaattcg 1856934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 15081464 - 15081305
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||     |||||||||||| || ||| ||||||||||  |||     
T  15081464 ttttgacgtcagaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacttctaagaccaattatggacctatcaataccatatttc 15081365  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | || | ||   |||||||||||| |||| |||| ||| ||||||||    
T  15081364 atttcaaattcggggcatagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 15081305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 13918219 - 13918107
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaa-gaccaattctgtaccgatcaataccagtttt 103  Q
    |||||| |||| ||||| || |||||||||||||||| |||| |||||  ||| |||||   |||||| ||||||||||||||| |||||||||||||||    
T  13918219 ttttgacgtcagaccaatggaattagaaagctaacattcatacctacagttttcgtgtttacacctaaagaccaattctgtaccaatcaataccagtttt 13918120  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  13918119 catttcaaattcg 13918107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 21189218 - 21189107
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| |||| |||||||| ||||||| |||||||||| |||||   |||||||||||||| |  ||| ||||||||||| |||     
T  21189218 ttttgacgtcagaccaacggcattaaaaagctaatatccatacctacaactttcgtgtttacacctaagaccaattgttgacctatcaataccagatttc 21189119  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  21189118 atttcaaattcg 21189107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11393106 - 11393044
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgtt 63  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||    
T  11393106 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtt 11393044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 17985192 - 17985092
Alignment:
Q  13 tcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaa 112  Q
    ||||||||||   ||||||||  |||||||| || ||||||||||  ||||   ||||||||||||||||||||||||||||||||| ||| |||| |||    
T  17985192 tcaaaccaactccattagaaatttaacatccttacctacaactttcatgtttacacctaagaccaattctgtaccgatcaataccagatttcatttgaaa 17985093  T
Q  113 t 113  Q
    |    
T  17985092 t 17985092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13841397 - 13841442
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccata 46  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  13841397 atccttttgaagtcaaaccaacggaattagaaagctaacattcata 13841442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 11310133 - 11310212
Alignment:
Q  36 taacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||| ||| ||||||||||||||  |  |||||||||||||| |||||  ||||||| ||||||| ||||||||||||    
T  11310133 taacatctatacctacaacttttgtgaaaacacctaagaccaattatgtacttatcaata-cagttttcatttcaaattcg 11310212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 23461864 - 23461796
Alignment:
Q  48 ctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||||| |||||   ||||||||||||||||| ||| |||||||||||  || ||||||||||||    
T  23461864 ctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagacttcatttcaaattcg 23461796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 11393040 - 11393004
Alignment:
Q  80 tctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  11393040 tctgtaccaatcaataccagttttcatttcaaattcg 11393004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 7e-42; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 12119473 - 12119313
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||   |||||||||||||||||||| |||||||||||||    
T  12119473 atccttttgaagtcaaaccaacggcactagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtactgatcaataccagt 12119374  T
Q  101 ttttatttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttatt 158  Q
    |||||||||||||||| | |||| ||   |||||||||||| |||| |||| ||| |||||    
T  12119373 ttttatttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattatt 12119313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20630011 - 20629896
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||| |||||||| |||    
T  20630011 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaatacaagt 20629912  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  20629911 tttcatttcaaattcg 20629896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 53301323 - 53301208
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  53301323 atccttttgaagtcaaaccaacggcattagaaagctaatatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 53301224  T
Q  101 ttttatttcaaattcg 116  Q
    ||||||||||||||||    
T  53301223 ttttatttcaaattcg 53301208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8499863 - 8499978
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  8499863 atccttttgaagtcaaaccaacggcattagaaagctaacttccatatctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagt 8499962  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  8499963 tttcatttcaaattcg 8499978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 54521165 - 54521279
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  54521165 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacccacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 54521264  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  54521265 tttcatttcaaattc 54521279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7781166 - 7781051
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||| |  ||| ||||||||||||||||   ||||||||||||||||||||| ||||||||||||    
T  7781166 atccttttgaagtcaaaccaacggcattagaaagctaacgtttatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagt 7781067  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  7781066 tttcatttcaaattcg 7781051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13544366 - 13544481
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| |||||||| |||    
T  13544366 atccttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaatactagt 13544465  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  13544466 tttcatttcaaattcg 13544481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17463520 - 17463635
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  17463520 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 17463619  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  17463620 tttcatttcaaattcg 17463635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34159668 - 34159783
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  34159668 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 34159767  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  34159768 tttcatttcaaattcg 34159783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 45606726 - 45606611
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  45606726 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 45606627  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  45606626 tttcatttcaaattcg 45606611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 8500060 - 8500219
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||| ||| ||||||||||||||||   |||||||||||||||| || ||||||||||||||||||    
T  8500060 ttttgacgtcagaccaacggcattagaaagctaacatctatacctacaacttttgtgtttacacctaagaccaattctatatcgatcaataccagttttt 8500159  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| |  ||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  8500160 atttcaaattcggggaagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 8500219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 15977878 - 15977990
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||    
T  15977878 cttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagtttt 15977977  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  15977978 catttcaaattcg 15977990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 10247539 - 10247428
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  10247539 ttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 10247440  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  10247439 atttcaaattcg 10247428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 12567906 - 12568017
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| |||||||| ||||||     
T  12567906 ttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaatactagttttc 12568005  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  12568006 atttcaaattcg 12568017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 16454096 - 16453985
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  16454096 ttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 16453997  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  16453996 atttcaaattcg 16453985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17444583 - 17444468
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  |||||||||||||||| |||| |||||||||| |||||   || |||||||||||||||||| ||||||||||||    
T  17444583 atccttttgaagtcaaaccaacgacattagaaagctaacattcatacctacaactttcgtgtttacacttaagaccaattctgtaccaatcaataccagt 17444484  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  17444483 tttcatttcaaattcg 17444468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 27165792 - 27165903
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| |||||||||||||||| |||| |||||||||| |||||   |||||||||||||||||||||||||||||| |||||||    
T  27165792 ttttgacgtcagaccaacggcattagaaagctaacatacatacctacaactttcgtgtttacacctaagaccaattctgtaccgatcaatactagttttt 27165891  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  27165892 atttcaaattcg 27165903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28848441 - 28848326
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||| ||||| ||||||||||||    
T  28848441 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattcagtaccaatcaataccagt 28848342  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  28848341 tttcatttcaaattcg 28848326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 29544658 - 29544547
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    |||||||| |||||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||| |||||||    
T  29544658 cttttgaaatcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataacagtttt 29544559  T
Q  104 tatttcaaattc 115  Q
     |||||||||||    
T  29544558 catttcaaattc 29544547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41124282 - 41124397
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  41124282 atccttttgaagtcaaatcaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 41124381  T
Q  101 ttttatttcaaattcg 116  Q
    ||| |||||| |||||    
T  41124382 tttcatttcacattcg 41124397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 55476833 - 55476948
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   |||||||||||||||||||||  |||||||||||    
T  55476833 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccagtcaataccagt 55476932  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  55476933 tttaatttcaaattcg 55476948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15412774 - 15412884
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  15412774 atccttttgaagtcaaaccaacggcactagaaagctaacatccatacctacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagt 15412873  T
Q  101 ttttatttcaa 111  Q
    ||| |||||||    
T  15412874 tttcatttcaa 15412884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10557251 - 10557366
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||| |||||||||| |||||   |||||||||||||| | |||| ||||||||||||    
T  10557251 atccttttgaagtaaaactaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattatttaccaatcaataccagt 10557350  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  10557351 tttcatttcaaattcg 10557366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13154075 - 13153960
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||| ||| |||||| |||||   ||||| ||||||||||||||| ||||||||||||    
T  13154075 atccttttgaagtcaaactaacggcattagaaagctaacattcatacctaaaactttcgtgtttacacctatgaccaattctgtaccaatcaataccagt 13153976  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  13153975 tttcatttcaaattcg 13153960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13436642 - 13436753
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| || ||   |||||||||||||| |||||| |||||||| |||    
T  13436642 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtatttatacctaagaccaattatgtaccaatcaatacaagt 13436741  T
Q  101 ttttatttcaaa 112  Q
    ||| ||||||||    
T  13436742 tttcatttcaaa 13436753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16282577 - 16282462
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||||||||||| || |||||||| ||||||| |||| |||||||||| |||||   ||||||||||||||||||||| |||||||| |||    
T  16282577 atccttttgaagtcaaaccaatggcattagaaatctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaatactagt 16282478  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  16282477 tttcatttcaaattcg 16282462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 27165595 - 27165706
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||| |||||    |||||||||||||||||||| ||||||||||||    
T  27165595 atccttttgaagtcaaactaacggcattagaaagctaagatccatacctacaactttcgtgtttacccctaagaccaattctgtaccaatcaataccagt 27165694  T
Q  101 ttttatttcaaa 112  Q
    ||| ||||||||    
T  27165695 tttcatttcaaa 27165706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 46822604 - 46822715
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   |||||||||||||| | |||| |||||||||| |    
T  46822604 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattgtttaccaatcaataccact 46822703  T
Q  101 ttttatttcaaa 112  Q
    ||| ||||||||    
T  46822704 tttcatttcaaa 46822715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 24514023 - 24514182
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||| | | ||||||||||| |||     
T  24514023 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggagctatcaataccagatttc 24514122  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||||||| ||||||||    
T  24514123 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacttatattattcaa 24514182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 41124479 - 41124638
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  |||||||||||||||| |||| ||||||||||||||||   |||||||||||||||| |||| |||||||||||||||     
T  41124479 ttttgacgtcagaccaacgacattagaaagctaacattcatacctacaacttttgtgtttacacctaagaccaattctttaccaatcaataccagttttc 41124578  T
Q  105 atttcaaattcgagacaga---aataagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | ||||   || ||||||||| |  ||||||||| ||| ||||||||    
T  41124579 atttcaaattcggggcagagataaaaagaaaaataaaaaaaaacaacctatattattcaa 41124638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 55319119 - 55319010
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| |||||||||| ||||     
T  55319119 ttttgacgtcagaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttc 55319020  T
Q  105 atttcaaatt 114  Q
    ||||||||||    
T  55319019 atttcaaatt 55319010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 6468951 - 6468839
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||| ||||||||||||||||  ||| || ||||||| |||||   | ||||||||||||||||||| |||||||||||||||    
T  6468951 cttttgaagtcaaaccaacggcattagaaagctaacatttatacctccaactttcgtgtttacagctaagaccaattctgtaccaatcaataccagtttt 6468852  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  6468851 catttcaaattcg 6468839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38961658 - 38961542
Alignment:
Q  1 atccttttgaagtcaaaccaacggt-attagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccag 99  Q
    ||||||||||||||||||||||||  ||||||| |||||||| |||| |||||||||| |||||   ||||||||||||||||||| | |||||||||||    
T  38961658 atccttttgaagtcaaaccaacggccattagaaggctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtatcaatcaataccag 38961559  T
Q  100 tttttatttcaaattcg 116  Q
    |||| ||||||||||||    
T  38961558 ttttcatttcaaattcg 38961542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 10379674 - 10379785
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||| | ||||||||||||||||    
T  10379674 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtatcaatcaataccagttttt 10379773  T
Q  105 atttcaaattcg 116  Q
    |||||| |||||    
T  10379774 atttcatattcg 10379785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13151610 - 13151495
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||| ||| |||||| |||||   ||||| |||||||||||| || ||||||||||||    
T  13151610 atccttttgaagtcaaactaacggcattagaaagctaacattcatacctaaaactttcgtgtttacacctatgaccaattctgttccaatcaataccagt 13151511  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  13151510 tttcatttcaaattcg 13151495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 20629807 - 20629655
Alignment:
Q  12 gtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaa 111  Q
    |||| |||||||  ||||||||||||||||||||| ||| ||||||||||||   ||||||||||||||||| ||| ||||||||||| ||| |||||||    
T  20629807 gtcagaccaacgacattagaaagctaacatccatacctataacttttgtgtttacacctaagaccaattctggacctatcaataccagatttcatttcaa 20629708  T
Q  112 attcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    ||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  20629707 attcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 20629655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 53301126 - 53300967
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  |||||||||||||||| |||| |||||||||| |||||   |||||||||||||| |||||||||||||||  ||||||    
T  53301126 ttttgacgtcagaccaacgacattagaaagctaacatacatacctacaactttcgtgtttacacctaagaccaattatgtaccgatcaatacttgttttt 53301027  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | || | ||   |||||||||||| |||| |||| ||| ||||||||    
T  53301026 atttcaaattcggggcaaagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 53300967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 5223730 - 5223841
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || ||||||||||||||||||||| ||| |||||| |||||   ||||||||| ||||||||||| |||||||||||||||     
T  5223730 ttttgacgtcagaccaatggcattagaaagctaacatccatacctataactttcgtgtttacacctaagacgaattctgtaccaatcaataccagttttc 5223829  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  5223830 atttcaaattcg 5223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 15465501 - 15465612
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| |||||||||| ||||     
T  15465501 ttttgacgtcagaccaatggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttc 15465600  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  15465601 atttcaaattcg 15465612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 38961460 - 38961301
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||  ||| ||||||||||  |||     
T  38961460 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattcttgacctatcaataccatatttc 38961361  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  38961360 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacatatattattcaa 38961301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 46822801 - 46822960
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||  |||||   |||||||||||||| |||| | |||||||||||||||     
T  46822801 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaacttccgtgtttacacctaagaccaattatgtagcaatcaataccagttttc 46822900  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | || | ||   |||||||||||| |||| |||| ||| ||||||||    
T  46822901 atttcaaattcggggcacagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 46822960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 55318926 - 55318767
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| |||||||||||| |||||||| |||||||||| |||||   ||||||||||| ||||| ||| ||||||||||| |||     
T  55318926 ttttgatgtcataccaacggcattagaaagctaccatccatacctacaactttcgtgtttacacctaagaccagttctggacctatcaataccagatttc 55318827  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||| | | |||| ||   |||||||||||| ||||| ||| ||| ||||||||    
T  55318826 atttcaaatttggggcagagatgaaaagaaaaatcagaaaaaataacctatattattcaa 55318767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 10557460 - 10557559
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||   | ||||||||||||||||||| ||||||||||  |||  |||||||||||    
T  10557460 accaacggcattagaaagctaacatccatacctacaacttttgtgtttacaactaagaccaattctgtaccaatcaataccatatttcgtttcaaattcg 10557559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25229599 - 25229714
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||| ||||  |||| |||||||| ||||||| |||| | |||||||| |||||   ||||||||||||||||||| | |||||||||| |    
T  25229599 atccttttgaagttaaacacacggcattagaaacctaacattcataccaacaactttcgtgtttacacctaagaccaattctgtatcaatcaataccaat 25229698  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  25229699 tttcatttcaaattcg 25229714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25237186 - 25237301
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||| ||||  |||| |||||||| ||||||| |||| | |||||||| |||||   ||||||||||||||||||| | |||||||||| |    
T  25237186 atccttttgaagttaaacacacggcattagaaacctaacattcataccaacaactttcgtgtttacacctaagaccaattctgtatcaatcaataccaat 25237285  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  25237286 tttcatttcaaattcg 25237301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 26055080 - 26054969
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || ||||||||||||||||||||| ||||||||||  ||||   |||||||||||||| |||||| |||||||||| ||||     
T  26055080 ttttgacgtcagaccaaaggcattagaaagctaacatccatacctacaactttcatgtttacacctaagaccaattatgtaccaatcaataccaattttc 26054981  T
Q  105 atttcaaattcg 116  Q
     |||||||||||    
T  26054980 ctttcaaattcg 26054969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 13937595 - 13937485
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||   || ||||||||||| |||     
T  13937595 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattcttgtcctatcaataccagatttc 13937496  T
Q  105 atttcaaattc 115  Q
    |||||||||||    
T  13937495 atttcaaattc 13937485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 16358458 - 16358372
Alignment:
Q  30 gaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||||||| ||||||| ||||||  ||||   ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  16358458 gaaagctaacatctatatctaaaactttcatgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcg 16358372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 17393255 - 17393345
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaata 95  Q
    ||||| |||||||||||||  ||| ||||| ||||||||||| ||||||||||||||||   | |||||||||||||||||||||||||||    
T  17393255 ttttggagtcaaaccaacgccattggaaaggtaacatccatacctacaacttttgtgtttacatctaagaccaattctgtaccgatcaata 17393345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 36528340 - 36528420
Alignment:
Q  36 taacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||||| |||||||||| |||||   | ||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  36528340 taacatccatacctacaactttcgtgtttacatctaagaccaattctgtacttatcaataccagttttcatttcaaattcg 36528420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 17444374 - 17444275
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||  ||||||||| |||||||||||  |||||||||  ||||   ||||||||||||||||| ||| ||||||||||| ||| ||||||||||||    
T  17444374 accaacgacattagaaagataacatccatacttacaactttcctgtttacacctaagaccaattctggacctatcaataccagatttcatttcaaattcg 17444275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 16282359 - 16282221
Alignment:
Q  26 attagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcgagacagaaa 125  Q
    |||| |||| ||||||| ||| |||||||||| |||||   ||||||||||||||||  ||| ||||||||||| ||| |||| ||||||| | |||| |    
T  16282359 attaaaaagataacatctatacctacaactttcgtgtttacacctaagaccaattcttgacctatcaataccagatttcattttaaattcggggcagaga 16282260  T
Q  126 t---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |   |||||||||||| |||| |||| ||| ||||||||    
T  16282259 tgaaaagaaaaatcagaaaaagcaacctatattattcaa 16282221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 15007868 - 15007960
Alignment:
Q  27 ttagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccag---tttttatttcaaattcg 116  Q
    |||||||||||||||||||| ||| |||||| |||||   |||||| ||||||| |||||| |||||||||||   |||| ||||||||||||    
T  15007868 ttagaaagctaacatccatacctataactttcgtgtttacacctaaaaccaattttgtaccaatcaataccagtacttttcatttcaaattcg 15007960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14567511 - 14567430
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattct 82  Q
    |||||||||| || | |||||||  |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||    
T  14567511 atccttttgatgttagaccaacgacattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattct 14567430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 12305531 - 12305579
Alignment:
Q  67 acctaagaccaattctgtaccgatcaataccagtttttatttcaaattc 115  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  12305531 acctaagaccaattctgtaccaatcaatatcagttttcatttcaaattc 12305579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16358294 - 16358238
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttt 57  Q
    |||| ||||| |||| |||||||| ||||||||||||||||||||| ||||||||||    
T  16358294 atccgtttgacgtcagaccaacggcattagaaagctaacatccatacctacaacttt 16358238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 36528509 - 36528560
Alignment:
Q  12 gtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgtt 63  Q
    |||||||||| || ||||||||||||||||||||| |||||||||| |||||    
T  36528509 gtcaaaccaatggcattagaaagctaacatccatacctacaactttcgtgtt 36528560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 8899434 - 8899483
Alignment:
Q  67 acctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||||||||||| ||| ||||||||||| ||| ||||||||||||    
T  8899434 acctaagaccaattctggacctatcaataccagatttcatttcaaattcg 8899483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 14567630 - 14567589
Alignment:
Q  75 ccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||||||| | ||||||||||||| ||||||||||||    
T  14567630 ccaattctgtacctaccaataccagttttcatttcaaattcg 14567589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 13937709 - 13937677
Alignment:
Q  84 taccgatcaataccagtttttatttcaaattcg 116  Q
    |||| ||||||||||||||||||||||||||||    
T  13937709 taccaatcaataccagtttttatttcaaattcg 13937677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45290367 - 45290251
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||| |||||| ||||||||||||    
T  45290367 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattttgtaccaatcaataccagt 45290268  T
Q  101 ttttatttcaaattcga 117  Q
    ||| |||||||||||||    
T  45290267 tttcatttcaaattcga 45290251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 24048957 - 24049068
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||   |||||||||||||| |||||| ||||||||||||||||    
T  24048957 ttttgaagtcaaaccaacgacattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattatgtaccaatcaataccagttttt 24049056  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  24049057 atttcaaattcg 24049068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 15071100 - 15071259
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||    ||||||| ||||||| |||||||||||||||||||||    
T  15071100 ttttgacgtcagaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacccctaagatcaattctttaccgatcaataccagttttt 15071199  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||||||| ||||||||    
T  15071200 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacttatattattcaa 15071259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 15202995 - 15202883
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||   ||||||||||||||||||||| |||||||||||||||    
T  15202995 cttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagtttt 15202896  T
Q  104 tatttcaaattcg 116  Q
      |||||||||||    
T  15202895 cgtttcaaattcg 15202883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1484744 - 1484859
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  1484744 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 1484843  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  1484844 tttcatttcaaattcg 1484859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5853112 - 5852997
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  5853112 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 5853013  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  5853012 tttcatttcaaattcg 5852997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14409264 - 14409149
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  14409264 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 14409165  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  14409164 tttcatttcaaattcg 14409149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14824117 - 14824232
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   |||||||||||||||| |||| ||||||||||||    
T  14824117 atccttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctataccaatcaataccagt 14824216  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  14824217 tttcatttcaaattcg 14824232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 16198241 - 16198352
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||| ||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||||||    
T  16198241 ttttaaagtcaaaccaacggcattagaaagctaatatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttt 16198340  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  16198341 atttcaaattcg 16198352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 19896861 - 19896972
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||||||     
T  19896861 ttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagttttc 19896960  T
Q  105 atttcaaattcg 116  Q
    |||| |||||||    
T  19896961 atttaaaattcg 19896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20046015 - 20045900
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||| |||||||||| |||||||| |||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  20046015 atccttttgaagtgaaaccaacggcattagaaatctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 20045916  T
Q  101 ttttatttcaaattcg 116  Q
    ||||||||||||||||    
T  20045915 ttttatttcaaattcg 20045900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 24485859 - 24485748
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   ||| ||||||||||||||||| |||||||||||||||     
T  24485859 ttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacccaagaccaattctgtaccaatcaataccagttttc 24485760  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  24485759 atttcaaattcg 24485748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 32122280 - 32122427
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||   |||||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  32122280 accaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctataccaatcaataccagttttcatttcaaattcg 32122379  T
Q  117 agacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
     | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  32122380 gggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 32122427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 15202802 - 15202690
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||  | ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||| |||||||    
T  15202802 cttttgaagtcaaaccaatagcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaatatcagtttt 15202703  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  15202702 catttcaaattcg 15202690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 18677881 - 18677769
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||||||    
T  18677881 cttttgaagtcaaaccaacggcactagaaagctaacatccatacctacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagtttt 18677782  T
Q  104 tatttcaaattcg 116  Q
     |||| |||||||    
T  18677781 catttaaaattcg 18677769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 14397556 - 14397445
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||  |||||||||||||||| |||| ||||| |||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  14397556 ttttgaagtcaaaccaacgacattagaaagctaacattcatacctacagctttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 14397457  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  14397456 atttcaaattcg 14397445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 15070907 - 15071018
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||| ||||||||||||||| | ||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||||||     
T  15070907 tttttaagtcaaaccaacggcactagaaagctaacatccatacctacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttc 15071006  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  15071007 atttcaaattcg 15071018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 15202608 - 15202497
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||| | | ||||||||||| |||     
T  15202608 ttttgacgtcagaccaacggtattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctggatctatcaataccagatttc 15202509  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  15202508 atttcaaattcg 15202497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 16413131 - 16413020
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||| ||||||||||||||| |||||||| | |||||   |||||||||||||| |||||| |||||||||||||||     
T  16413131 ttttgaagtcaaaccaacggcattagcaagctaacatccatacctacaactgtcgtgtttacacctaagaccaattatgtaccaatcaataccagttttc 16413032  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  16413031 atttcaaattcg 16413020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19936727 - 19936612
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||||||||||| |  |||||||| ||||||| |||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  19936727 atccttttgaagtcaaaccaatgacattagaaatctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 19936628  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  19936627 tttcatttcaaattcg 19936612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20403815 - 20403930
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||| |||| |||||||| |||||||||||||||| |||| ||||||||||||||||   |||||||||||||| |||| | ||||||||||||    
T  20403815 atccttttgacgtcagaccaacggcattagaaagctaacattcatacctacaacttttgtgtttacacctaagaccaattatgtagcaatcaataccagt 20403914  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  20403915 tttcatttcaaattcg 20403930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 38549820 - 38549709
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||  |||||||| |||||||||||| ||||||||||||||||   |||||||||||||||| |||| ||||||||||| |||     
T  38549820 ttttgaagtcaaaccaacgacattagaaaactaacatccatacctacaacttttgtgtttatacctaagaccaattctttaccaatcaataccagatttc 38549721  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  38549720 atttcaaattcg 38549709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4483623 - 4483733
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| || |||||||||    
T  4483623 atccttttgaagtcaaaccaacggcactagaaagctaacatccatacctacaactttcgtgtttatacctaagaccaattatgtaccaataaataccagt 4483722  T
Q  101 ttttatttcaa 111  Q
    ||| |||||||    
T  4483723 tttcatttcaa 4483733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 27472039 - 27471880
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||| |||||||     
T  27472039 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaatatcagttttc 27471940  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  27471939 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 27471880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 4542189 - 4542078
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||| | ||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  4542189 ttttgaagtcaagcgaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 4542090  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  4542089 atttcaaattcg 4542078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16401744 - 16401629
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||| |||||||||| |||||   |||||||||||||| |||| | ||||||| ||||    
T  16401744 atccttttgaagtcaaaccaacggcattagaaatctaacatcaatacctacaactttcgtgtttacacctaagaccaattatgtatcaatcaatatcagt 16401645  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  16401644 tttcatttcaaattcg 16401629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 19936518 - 19936372
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||| ||||||| ||||||||||  ||||   ||||||||||||||||| ||| ||||||||||| ||| ||||||||||||    
T  19936518 accaacggaattagaaagctaatatccatagctacaactttcatgtttacacctaagaccaattctggacctatcaataccagatttcatttcaaattcg 19936419  T
Q  117 agacaga--aataagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
     | ||||  || |||||||||||| |||| |||||||| ||||||||    
T  19936418 gggcagagtaaaaagaaaaatcagaaaaagcaacttatattattcaa 19936372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20403622 - 20403737
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||| ||||||||||||||  ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||| | ||||||||||||    
T  20403622 atccttttcaagtcaaaccaacgacattagaaagctaacattaatacctacaactttcgtgtttacacctaagaccaattctgtatcaatcaataccagt 20403721  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  20403722 tttcatttcaaattcg 20403737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 27472236 - 27472125
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  |||||||| |||||||||||| |||||||||| |||||   | |||||||||||| |||||| ||||||||||||    
T  27472236 atccttttgaagtcaaaccaacgacattagaaatctaacatccatacctacaactttcgtgtttacagctaagaccaattatgtaccaatcaataccagt 27472137  T
Q  101 ttttatttcaaa 112  Q
    ||| ||||||||    
T  27472136 tttcatttcaaa 27472125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 38549627 - 38549516
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| |||| |||||||||||||||| |||||||||  |||||   |||||||| |||||||||||| |||||||||||||||     
T  38549627 ttttgaagtcaaaccaacggaattaaaaagctaacatccatacctacaacttccgtgtttatacctaagatcaattctgtaccaatcaataccagttttc 38549528  T
Q  105 atttcaaattcg 116  Q
    |||| |||||||    
T  38549527 attttaaattcg 38549516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 16412926 - 16412778
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||| ||||||||| |||||||||| |||| ||||||||||||    
T  16412926 accaacggaattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccagttctgtaccaatcaataccaattttcatttcaaattcg 16412827  T
Q  117 agacagaaat---aagaaaaatcaggaaaaa-caacttatgttattcaa 161  Q
     | |||| ||   |||||||||||| ||||| |||| ||| ||||||||    
T  16412826 cggcagagatgaaaagaaaaatcagaaaaaagcaacctatattattcaa 16412778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 38549435 - 38549276
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  |||||||||||||||||||||  ||||||||| |||||   ||||||||||||||||||||| ||||||||||| |||     
T  38549435 ttttgacgtcataccaacgacattagaaagctaacatccatacatacaactttcgtgtttacacctaagaccaattctgtacctatcaataccagatttc 38549336  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| |  ||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  38549335 atttcaaattcgggggagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 38549276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 22002098 - 22002210
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||  ||||||||||||||||  ||| ||||||||||  ||||   ||||||||||||||||||||| ||||||| |||||||    
T  22002098 cttttgaagtcaaaccaacgacattagaaagctaacatttatacctacaactttcatgtttacacctaagaccaattctgtaccaatcaatatcagtttt 22002197  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  22002198 catttcaaattcg 22002210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 16401354 - 16401244
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||||   |||||| |||||||||| ||| ||||||||||| |||     
T  16401354 ttttgacgtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaa-accaattctggacctatcaataccagatttc 16401256  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  16401255 atttcaaattcg 16401244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 32122075 - 32122186
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||||| || |||||   |||||||| |||||||||||| ||||||| ||||||      
T  32122075 ttttgaagtcaaactaacggcattagaaagctaacatccatacctacaacattcgtgtttacacctaagaacaattctgtaccaatcaatatcagtttac 32122174  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  32122175 atttcaaattcg 32122186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 16401547 - 16401437
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    ||||||||||||||||||||  || ||||||||||||||||| |||||||||| |||||   ||||||||||||||  ||||| ||||||||||||||      
T  16401547 ttttgaagtcaaaccaacggcgttggaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattacgtaccaatcaataccagtttgc 16401448  T
Q  105 atttcaaattc 115  Q
    |||||||||||    
T  16401447 atttcaaattc 16401437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 24049150 - 24049309
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| ||| |||||| |||||   ||||||||||||||||| ||| ||||||||||  |||     
T  24049150 ttttgacgtcagaccaacgacattagaaagctaacatccatacctataactttcgtgtttacacctaagaccaattctggacctatcaataccatatttc 24049249  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||  ||||||||| ||| ||||||||    
T  24049250 atttcaaattcggggcagagatgaaaagaaaaatcataaaaaacaacctatattattcaa 24049309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 11361056 - 11361167
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||| ||||||||||||||||||||||| |||||| |||||||||   |||||||||||||| || ||| |||||||| || |||     
T  11361056 ttttgacgtcagaccaacagtattagaaagctaacatccatacctacaagttttgtgtttacacctaagaccaattatgcacctatcaatactagatttc 11361155  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  11361156 atttcaaattcg 11361167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 19897054 - 19897213
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| |||||||| ||||||| |||| ||||||||||||| ||   | |||||||||||| || ||| ||||||||||| |||     
T  19897054 ttttgacgtcagaccaacggcattagaaatctaacattcatacctacaacttttgtatttacagctaagaccaattttggacctatcaataccagatttc 19897153  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  19897154 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 19897213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 45290461 - 45290385
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagacca 77  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   |||||||||||    
T  45290461 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagacca 45290385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19896664 - 19896779
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||||||||||||||   ||||||| ||| || |||| |||||| ||| |||||   |||||||||||||||| |||| ||||||||||||    
T  19896664 atccttttgaagtcaaaccaacggcgctagaaagttaaaattcatacctacaattttcgtgtttacacctaagaccaattctctaccaatcaataccagt 19896763  T
Q  101 ttttatttcaaattcg 116  Q
    ||| |||| |||||||    
T  19896764 tttcatttaaaattcg 19896779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 1326747 - 1326588
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||| |||||| |||| |||||||||| || ||   || |||||||||||||||||| ||||||||||| |||     
T  1326747 ttttgacgtcagaccaacgacattagaaagataacattcatacctacaactttcgtttttacacttaagaccaattctgtaccaatcaataccagatttc 1326648  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | || | ||   |||||||||||| |||| |||| ||| ||||||||    
T  1326647 atttcaaattcggggcaaagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 1326588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 32810264 - 32810402
Alignment:
Q  26 attagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcgagacagaaa 125  Q
    |||| |||||||||||||||| |||||||||| |||||   ||||||||||||||||| ||| |||||||  || ||| |||||||||||| | |||| |    
T  32810264 attacaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaatattagatttcatttcaaattcggggcagaga 32810363  T
Q  126 t---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |   |||||||||||| |||| |||| ||| ||||||||    
T  32810364 tgaaaagaaaaatcagaaaaagcaacctatattattcaa 32810402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25657972 - 25657892
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattc 81  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||  ||||   ||| |||||||||||    
T  25657972 atccttttgaagtcaaacaaacggcattagaaagctaacatccatacctacaactttcatgtttacaccaaagaccaattc 25657892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6794 - 6909
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  6794 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 6893  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  6894 tttcatttcaaattcg 6909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 6991 - 7150
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||| || ||||     
T  6991 ttttgacgtcataccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaatagcaattttc 7090  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||| ||||| |||||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  7091 atttcatattcgggacagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 7150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 4e-40; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1598399 - 1598514
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  1598399 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 1598498  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  1598499 tttcatttcaaattcg 1598514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2291000 - 2290885
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  2291000 atccttttgaagtcaaaccaacggcattagaaagctaacatttatatctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 2290901  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  2290900 tttcatttcaaattcg 2290885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 34963720 - 34963879
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||||||||  ||||   ||||||||||||||||||||| |||||||||||||||     
T  34963720 ttttgaagtcaaaccaacgacattagaaagctaacatccatacctacaactttcatgtttacacctaagaccaattctgtaccaatcaataccagttttc 34963819  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  34963820 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacatatattattcaa 34963879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 15892228 - 15892113
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  15892228 atccttttgaagtcaaaccaacggcattagaaagctagcatccatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagt 15892129  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  15892128 tttcatttcaaattcg 15892113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18334412 - 18334297
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  18334412 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 18334313  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  18334312 tttcatttcaaattcg 18334297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24422889 - 24423004
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  24422889 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 24422988  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  24422989 tttcatttcaaattcg 24423004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 30676525 - 30676414
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||||||     
T  30676525 ttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttc 30676426  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  30676425 atttcaaattcg 30676414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 33862136 - 33862251
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  33862136 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 33862235  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  33862236 tttcatttcaaattcg 33862251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 33864620 - 33864735
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  33864620 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 33864719  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  33864720 tttcatttcaaattcg 33864735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 28289156 - 28289042
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||   |||| ||||||||| |||||| ||||||||||||    
T  28289156 atccttttgaagtcaaaccaacgacattagaaagctaacatccatacctacaacttttgtgtttacacctgagaccaattatgtaccaatcaataccagt 28289057  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  28289056 tttcatttcaaattc 28289042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8055372 - 8055487
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  8055372 atccttttgaagtcaaaccaacggcaatagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 8055471  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  8055472 tttcatttcaaattcg 8055487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12742660 - 12742775
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   |||||||||||||||| |||| ||||||||||||    
T  12742660 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctataccaatcaataccagt 12742759  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  12742760 tttcatttcaaattcg 12742775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19005494 - 19005609
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||   ||||||||| |||| |||||| ||||||||||||    
T  19005494 atccttttgaagtcaaaccaacgacattagaaagctaacatccatacctacaatttttgtgtttacacctaagactaattatgtaccaatcaataccagt 19005593  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  19005594 tttcatttcaaattcg 19005609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 25535754 - 25535865
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||   |||||||||||||||| |||| |||||||||||||||     
T  25535754 ttttgaagtcaaaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctctaccaatcaataccagttttc 25535853  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  25535854 atttcaaattcg 25535865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 26924456 - 26924345
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   |||||||| |||||||||||| |||||||| ||||||     
T  26924456 ttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaacaattctgtaccaatcaatactagttttc 26924357  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  26924356 atttcaaattcg 26924345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1540731 - 1540616
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   |||||||||||||||| |||| ||||||||||||    
T  1540731 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctataccaatcaataccagt 1540632  T
Q  101 ttttatttcaaattcg 116  Q
    ||  ||||||||||||    
T  1540631 ttgcatttcaaattcg 1540616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25688845 - 25688960
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||| |||||   | ||||||||||||| ||||| || |||||||||    
T  25688845 atccttttgaagtcaaaccaacggcattacaaagctaacatccatacctacaactttcgtgtttacagctaagaccaattcggtaccaataaataccagt 25688944  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  25688945 tttgatttcaaattcg 25688960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 25689054 - 25689153
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  25689054 accaacggcattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttcaaattcg 25689153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31630360 - 31630245
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||| ||||| |||||||||||||| || ||| |||||| ||| |||||   ||||||||||||||||||||| ||||||||||||    
T  31630360 atccttttgaagtcaaactaacggcattagaaagctaacgtctatacctacaaatttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 31630261  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  31630260 tttcatttcaaattcg 31630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 19005691 - 19005850
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    ||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||  ||||||||||  |||     
T  19005691 ttttgaagtcagaccaacgacattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtactaatcaataccaaatttc 19005790  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||  |||| |||| ||| ||||||||    
T  19005791 atttcaaattcggggcagagatgaaaagaaaaatcataaaaagcaacctatattattcaa 19005850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 1598596 - 1598707
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||| || |||||| |||||||||||||||     
T  1598596 ttttgatgtcataccaacggcattagaaagctaacatccatacctacaactttcgtgtttatacctaagaccatttatgtaccaatcaataccagttttc 1598695  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  1598696 atttcaaattcg 1598707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 30676332 - 30676221
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| | |||||| ||||||||||||||||||||| |||||||||| || |||| |||||||||||||| ||||||  ||||||||||||||     
T  30676332 ttttgacgtcagagcaacggaattagaaagctaacatccatacctacaactttagtcttatcacctaagaccaattatgtaccattcaataccagttttc 30676233  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  30676232 atttcaaattcg 30676221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19858739 - 19858627
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||   |||| |||| ||||||||||||||||   |||||||| ||||| |||||| ||||||||||||    
T  19858739 atccttttgaagtcaaaccaacggcattagaaag---acattcatacctacaacttttgtgtttacacctaagatcaattatgtaccaatcaataccagt 19858643  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  19858642 tttcatttcaaattcg 19858627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18914275 - 18914390
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||| |||||||| | ||||||||| ||||||||||| |||||||||| |||||    ||||||||||||| |||||| || |||||||||    
T  18914275 atccttttgaagttaaaccaacagcattagaaagttaacatccatacctacaactttcgtgtttacccctaagaccaattatgtaccaataaataccagt 18914374  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  18914375 tttcatttcaaattcg 18914390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 23415311 - 23415422
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || |||||||| |||||||||||| |||||||||| |||||   ||||||||| ||||||||||| |||||||||||||||     
T  23415311 ttttgacgtcagaccaatggcattagaaaactaacatccatacctacaactttcgtgtttacacctaagacaaattctgtaccaatcaataccagttttc 23415410  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  23415411 atttcaaattcg 23415422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 17883305 - 17883203
Alignment:
Q  13 tcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaa 112  Q
    |||||||||||  ||||||| ||||||||||||| |||||||||| |||||   ||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  17883305 tcaaaccaacgacattagaatgctaacatccatacctacaactttcgtgtttacaccaaagaccaattctgtaccaatcaataccagttttcatttcaaa 17883206  T
Q  113 ttc 115  Q
    |||    
T  17883205 ttc 17883203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 1980 - 1871
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| ||||    |||||||||||||| |||||| |||||||||||||||     
T  1980 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaactttcgtgtgtacacctaagaccaattatgtaccaatcaataccagttttc 1881  T
Q  105 atttcaaatt 114  Q
    ||||||||||    
T  1880 atttcaaatt 1871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 8939 - 8830
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| ||||    |||||||||||||| |||||| |||||||||||||||     
T  8939 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaactttcgtgtgtacacctaagaccaattatgtaccaatcaataccagttttc 8840  T
Q  105 atttcaaatt 114  Q
    ||||||||||    
T  8839 atttcaaatt 8830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 19847594 - 19847435
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| || || || ||||||||||||||||||||| |||||||||| |||||   ||||| |||||||| |||||| |||||||||||||||     
T  19847594 ttttgacgtcagactaatggcattagaaagctaacatccatacctacaactttcgtgtttatacctaggaccaattatgtaccaatcaataccagttttc 19847495  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||| | | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  19847494 atttcaaatttggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 19847435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 17377664 - 17377576
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatca 92  Q
    |||||||||||||||||| || ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||    
T  17377664 cttttgaagtcaaaccaatggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatca 17377576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 22782572 - 22782684
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||  |  |   ||||||||||||||||||||| || ||||||| ||||    
T  22782572 cttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcctacttacacctaagaccaattctgtaccaattaataccattttt 22782671  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  22782672 catttcaaattcg 22782684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 18914484 - 18914583
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||| || |||| |||||||    
T  18914484 accaacggtattagaaagctaacttccatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagtattaatttaaaattcg 18914583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 1598796 - 1598948
Alignment:
Q  12 gtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaa 111  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||  ||||   || || ||||||||||| ||| ||||||||||||||| |||||||    
T  1598796 gtcagaccaacggaattagaaagctaacatccatacctacaactttaatgtttacacttatgaccaattctggacctatcaataccagttttcatttcaa 1598895  T
Q  112 attcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    ||||| |  ||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  1598896 attcggggtagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 1598948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19847787 - 19847676
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||| |||     |||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  19847787 atccttttgaagtcaaaccaacggcattagaaatcta----gcatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagt 19847692  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  19847691 tttcatttcaaattcg 19847676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 31630163 - 31630004
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| |||||   |||||||||||| | |||||  ||||||||||| |||     
T  31630163 ttttgacgtcagaccaacgacattagaaagctaacatccataactacaactttcgtgtttacacctaagaccaactatgtacttatcaataccagatttc 31630064  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||| ||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  31630063 attttaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 31630004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 27557076 - 27557180
Alignment:
Q  12 gtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaa 111  Q
    |||| ||||| || ||||||||||||||||||||| ||||||||||  ||||   |||||||||||||| |||||| ||||||| ||||||| |||||||    
T  27557076 gtcagaccaatggcattagaaagctaacatccatacctacaactttcatgtttacacctaagaccaattatgtaccaatcaatagcagttttcatttcaa 27557175  T
Q  112 attcg 116  Q
    |||||    
T  27557176 attcg 27557180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 18914665 - 18914824
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  |||||||| |||||||  ||| |||||||||| |||||   ||||||||||||||||| ||  ||||||||||| |||     
T  18914665 ttttgatgtcagaccaacgacattagaaatctaacatttatacctacaactttcgtgtttacacctaagaccaattctggacttatcaataccagatttc 18914764  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  18914765 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 18914824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 23992769 - 23992928
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||||   ||||||||||| ||||||||| |||||||||| |||||   ||||||||||||||||| ||| ||||||||| | |||     
T  23992769 ttttgacgtcagaccaacaacattagaaagctgacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccggatttc 23992868  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| |||  |||||||    
T  23992869 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatactattcaa 23992928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 26924263 - 26924152
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||  ||| ||||||||||  ||||   ||| ||| | ||||||||||| |||||||||||||||     
T  26924263 ttttgacgtcagaccaacgacattagaaagctaacatttatacctacaactttcatgtttacaccaaaggctaattctgtaccaatcaataccagttttc 26924164  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  26924163 atttcaaattcg 26924152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 25737032 - 25737100
Alignment:
Q  48 ctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||||| |||||   ||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  25737032 ctacaactttcgtgtttacacctaagacgaattctgtaccaatcaataccagttttcatttcaaattcg 25737100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 188 - 79
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttata-acctaagaccaattctgtaccgatcaataccagtttt 103  Q
    |||||| |||| |||||||  |||||||| |||||||||||| || ||||||| ||| |||| |||||||||||||| |||||   ||||||||||||||    
T  188 ttttgacgtcagaccaacgacattagaaaactaacatccataccttcaactttcgtg-tatacacctaagaccaattttgtacaactcaataccagtttt 90  T
Q  104 tatttcaaatt 114  Q
     |||| |||||    
T  89 cattttaaatt 79  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 12942580 - 12942646
Alignment:
Q  49 tacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattc 115  Q
    ||||||||| |||||   |||||||||||||| |||||| ||||||||||||||| |||||||||||    
T  12942580 tacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaattc 12942646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 25737182 - 25737240
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgtt 63  Q
    |||||| |||| |||||||  ||||||||||||||||||||| ||||||||||||||||    
T  25737182 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaacttttgtgtt 25737240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 22981486 - 22981444
Alignment:
Q  74 accaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  22981486 accaattctgtaccaatcaataccagttttcatttcaaattcg 22981444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 23806922 - 23806964
Alignment:
Q  74 accaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  23806922 accaattctgtaccaatcaataccagttttcatttcaaattcg 23806964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 9070 - 9021
Alignment:
Q  67 acctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||||||||||||||| |||| |||||||||| |||| |||||||    
T  9070 acctaagaccaattctgtaccaatcattaccagttttcatttaaaattcg 9021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 25689235 - 25689313
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctg 83  Q
    |||||| |||| |||||||  ||||||| ||| ||||||| | |||||||||| |||||   |||||||||||||||||    
T  25689235 ttttgatgtcagaccaacgtcattagaatgctgacatccacacctacaactttcgtgtttacacctaagaccaattctg 25689313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 4e-40; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 3515354 - 3515465
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||| ||||||||||||||||||||||     
T  3515354 ttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattttgtaccgatcaataccagttttc 3515453  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  3515454 atttcaaattcg 3515465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 15534524 - 15534638
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  15534524 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 15534623  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  15534624 tttcatttcaaattc 15534638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 36038213 - 36038327
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||   ||||||| ||||||||||||| ||||||||||||    
T  36038213 atccttttgaagtcaaaccaacggtattagaaagctaacatccatacctacaactttcgtgtttacacctaaggccaattctgtaccaatcaataccagt 36038312  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  36038313 tttcatttcaaattc 36038327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 14970329 - 14970170
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||  |||||||||||||||     
T  14970329 ttttgacgtcagaccaacggcattagaaagctaacatccatacctacaacttttgtgttatcacctaagaccaattgtgtacaaatcaataccagttttc 14970230  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  14970229 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 14970170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 49547593 - 49547479
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| |||||   ||||||||||||||||||||| ||||||||||||    
T  49547593 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaaatttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 49547494  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  49547493 tttcatttcaaattc 49547479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 14970522 - 14970411
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   |||||||||||||||| |||| |||||||||||||||     
T  14970522 ttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctataccaatcaataccagttttc 14970423  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  14970422 atttcaaattcg 14970411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 15118172 - 15118057
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  15118172 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 15118073  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  15118072 tttcatttcaaattcg 15118057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 50222159 - 50222044
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| ||||| ||||||||||   ||||||||||||||||||||| ||||||||||||    
T  50222159 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacatcttttgtgtttacacctaagaccaattctgtaccaatcaataccagt 50222060  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  50222059 tttcatttcaaattcg 50222044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 52312904 - 52313019
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  52312904 atccttttgaagtaaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 52313003  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  52313004 tttcatttcaaattcg 52313019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 52872892 - 52872777
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  52872892 atccttttgaagtcaaaccaacggcattagaaagctagcatccatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagt 52872793  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  52872792 tttcatttcaaattcg 52872777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 19617886 - 19617772
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||| ||| |||||||||||||  |||||||||||| |||||||| ||||||||||||    
T  19617886 atccttttgaagtcacaccaacagcattagaaagctaacatccatacctataacttttgtgttaacacctaagaccaactctgtaccaatcaataccagt 19617787  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  19617786 tttcatttcaaattc 19617772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 362720 - 362831
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  362720 ttttgatgtcagaccaacggcattagaaagctaacatccatacctacaactttagtgtttacacctaagaccaattctgtaccaatcaataccagttttc 362819  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  362820 atttcaaattcg 362831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29267696 - 29267811
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  29267696 atccttttgaagtcaaaccaacggcaatagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 29267795  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  29267796 tttcatttcaaattcg 29267811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 12074 - 11911
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||     
T  12074 atccttttgaagtcaaaccaacgacattagaaagctaacattgatacctacaactttcgtgtttacacctaagaccaattctgtacctatcaataccaga 11975  T
Q  101 ttttatttcaaattcgagacaga---aataagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    ||| |||||||||||| | ||||   || |||||||||||| |||| ||||  || ||||||||    
T  11974 tttcatttcaaattcggggcagagataaaaagaaaaatcagaaaaagcaacccatattattcaa 11911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 52872695 - 52872536
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||| | ||||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||||||     
T  52872695 ttttgacgtcagaccaacagaattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagttttc 52872596  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  52872595 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 52872536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1837339 - 1837224
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||  ||| ||||||||||  ||||   ||||||||||||||||||||| ||||||||||||    
T  1837339 atcctttttaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcatgtttacacctaagaccaattctgtaccaatcaataccagt 1837240  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  1837239 tttcatttcaaattcg 1837224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7641006 - 7640891
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||| ||||||| || ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  7641006 atccttttgaagtgaaaccaatggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 7640907  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  7640906 tttcatttcaaattcg 7640891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 15495979 - 15495880
Alignment:
Q  15 aaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaatt 114  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  15495979 aaaccaacggcattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcattccaaatt 15495880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 19858118 - 19858229
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||| |||||||||| ||||     
T  19858118 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaacttttgtgtttgcacctaagaccaattctgtaccaatcaataccatttttc 19858217  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  19858218 atttcaaattcg 19858229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 18214826 - 18214667
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||| ||| ||||||||||| |||     
T  18214826 ttttgacgtcagaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagatttc 18214727  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||| | | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  18214726 atttcaaatttggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 18214667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 19857925 - 19858029
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||||||     
T  19857925 ttttgaagtcaaaccaacggcattagaaagctaacatacatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagttttc 19858024  T
Q  105 atttc 109  Q
    |||||    
T  19858025 atttc 19858029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14746331 - 14746216
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||| |||||||||| ||  |   ||| ||||||||||||||||| ||||||||||||    
T  14746331 atccttttaaagtcaaaccaacggaattagaaagctaacattcatacctacaactttcgtccttacaccgaagaccaattctgtaccaatcaataccagt 14746232  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  14746231 tttcatttcaaattcg 14746216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 14746134 - 14746023
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||| ||||||||||| ||||||||||  ||||   ||||||||||||||||||||| |||||||||||||||     
T  14746134 ttttgacgtcagaccaacgacattagaaagataacatccatacctacaactttcttgtttacacctaagaccaattctgtaccaatcaataccagttttc 14746035  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  14746034 atttcaaattcg 14746023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44615631 - 44615746
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||| ||| |||||   || ||||||||||| |||||  ||||||||||||    
T  44615631 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaaatttcgtgtttacacttaagaccaattatgtactaatcaataccagt 44615730  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  44615731 tttcatttcaaattcg 44615746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 44772899 - 44772788
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||  |||||||||||||||| |||| |||||||||| |||||   |||||||||||||||| |||| || ||||||||||||     
T  44772899 ttttgaagtcaaaccaacgacattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctctaccaataaataccagttttc 44772800  T
Q  105 atttcaaattcg 116  Q
    |||| |||||||    
T  44772799 atttaaaattcg 44772788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 362527 - 362637
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||| ||||  ||||||||||||||||||||| |||||||||| |||||   ||||||||| |||| |||| | |||||||||||||||     
T  362527 ttttgaagtcaaactaacgacattagaaagctaacatccatacctacaactttcgtgtttacacctaagactaattttgtatcaatcaataccagttttc 362626  T
Q  105 atttcaaattc 115  Q
    |||||||||||    
T  362627 atttcaaattc 362637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14048920 - 14049034
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| | ||||||||  ||||   |||||| ||||||| |||||| |||||||| |||    
T  14048920 atccttttgaagtcaaaccaacggcattagaaagctaacattcatacccacaactttcatgtttacacctaaaaccaattatgtaccaatcaatactagt 14049019  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  14049020 tttcatttcaaattc 14049034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 3515559 - 3515706
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||    |||||||||||||||| ||| ||||||||||| ||| |||||||||||     
T  3515559 accaacggcattagaaagctaacatccatacctacaactttcgtgtttacgcctaagaccaattctggacctatcaataccagatttcatttcaaattca 3515658  T
Q  117 agacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
     |  ||| ||   |||||||||||| ||||||||| ||| ||||||||    
T  3515659 gggtagagatgaaaagaaaaatcagaaaaaacaacctatattattcaa 3515706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 19617677 - 19617578
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||    |||||||||||||| |||||| ||||||||||| ||| ||||||||||||    
T  19617677 accaacggcattagaaagctaacatccatacctacaactttcgtgtctacacctaagaccaattatgtaccaatcaataccagatttcatttcaaattcg 19617578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 52313101 - 52313212
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || |||||||| |||||||||||| ||||||||||||||||   |||||||| |||||||| ||| ||||||||||| |||     
T  52313101 ttttgacgtcataccaaaggcattagaaatctaacatccatacctacaacttttgtgtttacacctaagatcaattctggacctatcaataccagatttc 52313200  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  52313201 atttcaaattcg 52313212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 14185507 - 14185593
Alignment:
Q  30 gaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||||||  | |||||||||||||  |||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14185507 gaaagctaacacacttatctacaactttcatgttaacacctaagaccaattctgtaccaatcaataccagtttttatttcaaattcg 14185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 19243047 - 19243158
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  |||||||||||||||| |||| ||||||||||  ||||   ||||||||| ||||||||||| |||||||||||||||     
T  19243047 ttttgacgtcagaccaacgacattagaaagctaacatacatacctacaactttcttgtttatacctaagactaattctgtaccaatcaataccagttttc 19243146  T
Q  105 atttcaaattcg 116  Q
     |||||||||||    
T  19243147 gtttcaaattcg 19243158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 52313294 - 52313405
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| ||| |||||| |||||   |||||||| |||||||  ||| ||||||||||| |||     
T  52313294 ttttgacgtcagaccaacggcattagaaagctaacatccatacctataactttcgtgtttacacctaagatcaattcttgacctatcaataccagatttc 52313393  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  52313394 atttcaaattcg 52313405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 362913 - 363072
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| | |||   |||||||||||||||| |||  ||||||||||  |||     
T  362913 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaactttcgggtttacacctaagaccaattctatacaaatcaataccacatttc 363012  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||  |||| |||| ||| ||||||||    
T  363013 atttcaaattcggggcagagatgaaaagaaaaatcataaaaagcaacatatattattcaa 363072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 15495796 - 15495716
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgta 85  Q
    |||||| |||| |||||||  ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||||||    
T  15495796 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctgta 15495716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14185671 - 14185727
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttt 57  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  14185671 atccttttgacgtcaaaccaacggcattagaaagctaacatccatacctacaacttt 14185727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 12778460 - 12778387
Alignment:
Q  43 catatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  12778460 catacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagatttcatttcaaattcg 12778387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 18214957 - 18214908
Alignment:
Q  67 acctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  18214957 acctaagaccaattctgtaccaatcaataccagttttcatttcaaattcg 18214908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 30147297 - 30147373
Alignment:
Q  40 atccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||  |||||||||||||||   |||||||||||||| |||||| |||||| ||| |||| ||||||||||||    
T  30147297 atccatacttacaacttttgtgtttacacctaagaccaattttgtaccaatcaattccatttttcatttcaaattcg 30147373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 15489709 - 15489612
Alignment:
Q  67 acctaagaccaattctgtaccgatcaataccagtttttatttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    ||||||||||||||||||| | |||||||||||  || |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  15489709 acctaagaccaattctgtatcaatcaataccagacttcatttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 15489612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 22725474 - 22725431
Alignment:
Q  71 aagaccaattctgtaccgatcaataccagtttttatttcaaatt 114  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||    
T  22725474 aagaccaattctgtacctatcaatatcagttttcatttcaaatt 22725431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 15355069 - 15354981
Alignment:
Q  76 caattctgtaccgatcaataccagtttttatttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    ||||| |||| | ||| ||||||||||| |||||||||||| | |||| ||   |||||||||||| |||| |||| ||||||||||||    
T  15355069 caattatgtagcaatcgataccagttttcatttcaaattcggggcagagatggaaagaaaaatcagaaaaagcaacctatgttattcaa 15354981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 4e-40; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23707036 - 23706921
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||| ||||||| ||||    
T  23707036 atccttttgaagtcaaaccaacggaattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaatatcagt 23706937  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  23706936 tttcatttcaaattcg 23706921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20261562 - 20261676
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  20261562 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 20261661  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  20261662 tttcatttcaaattc 20261676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18809285 - 18809400
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  18809285 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 18809384  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  18809385 tttcatttcaaattcg 18809400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 22105812 - 22105923
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||| ||| |||||||||||||||     
T  22105812 ttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgcaccaatcaataccagttttc 22105911  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  22105912 atttcaaattcg 22105923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23709352 - 23709237
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||||||   |||||||||||||| |||||| ||||||||||||    
T  23709352 atccttttgaagtcaaaccaactgcattagaaagctaacattcatacctacaacttttgtgtttacacctaagaccaattatgtaccaatcaataccagt 23709253  T
Q  101 ttttatttcaaattcg 116  Q
     |||||||||||||||    
T  23709252 atttatttcaaattcg 23709237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23711833 - 23711718
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  23711833 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 23711734  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  23711733 tttcatttcaaattcg 23711718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23931803 - 23931918
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  23931803 atccttttgaagtcaaaccaacggcattagaaagctaacatcaatacctacaactttagtgtttacacctaagaccaattatgtaccaatcaataccagt 23931902  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  23931903 tttcatttcaaattcg 23931918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 24368173 - 24368284
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  24368173 ttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 24368272  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  24368273 atttcaaattcg 24368284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 28577441 - 28577556
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| ||||||| ||||    
T  28577441 atccttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaatatcagt 28577540  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  28577541 tttcatttcaaattcg 28577556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 39682656 - 39682771
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  39682656 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 39682755  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  39682756 tttcatttcaaattcg 39682771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 45027724 - 45027609
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||||||||||| || |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  45027724 atccttttgaagtcaaaccaatggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 45027625  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  45027624 tttcatttcaaattcg 45027609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10684582 - 10684468
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |   ||||||||||||||||||| | ||||||||||||    
T  10684582 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgcttacacctaagaccaattctgtatcaatcaataccagt 10684483  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  10684482 tttcatttcaaattc 10684468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23135922 - 23136037
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  23135922 atccttttgaagtcaaaccaacgggattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagt 23136021  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  23136022 tttcatttcaaattcg 23136037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24642568 - 24642453
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||   |||||||| |||||||||||| ||||||||||||    
T  24642568 atccttttgaagtcaaaccaacgacattagaaagctaacatccatacctacaacttttgggtttacacctaagagcaattctgtaccaatcaataccagt 24642469  T
Q  101 ttttatttcaaattcg 116  Q
    |||  |||||||||||    
T  24642468 tttcttttcaaattcg 24642453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 32214746 - 32214635
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||   |||||||| ||||| |||||| |||||||||||||||     
T  32214746 ttttgaagtcaaaccaatggcattagaaagctaacatccatacctacaacttttgtgtttacacctaagaacaattttgtaccaatcaataccagttttc 32214647  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  32214646 atttcaaattcg 32214635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23131205 - 23131315
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  23131205 atccttttgaagtcaaaccaacggcactagaaagctaacatccatacctacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagt 23131304  T
Q  101 ttttatttcaa 111  Q
    ||| |||||||    
T  23131305 tttcatttcaa 23131315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23133672 - 23133782
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  23133672 atccttttgaagtcaaaccaacggcactagaaagctaacatccatacctacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagt 23133771  T
Q  101 ttttatttcaa 111  Q
    ||| |||||||    
T  23133772 tttcatttcaa 23133782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 34402341 - 34402231
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  34402341 atccttttgaagtcaaaccaacggcactagaaagctaacatccatacctacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagt 34402242  T
Q  101 ttttatttcaa 111  Q
    ||| |||||||    
T  34402241 tttcatttcaa 34402231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 22106017 - 22106164
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  22106017 accaacggcattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttcaaattcg 22106116  T
Q  117 agacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
     | |||| ||   || ||||||||| |||| |||| ||| ||||||||    
T  22106117 gggcagagatgaaaataaaaatcagaaaaagcaacctatattattcaa 22106164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 24529366 - 24529253
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||   |||||||||||||| |||||| |||||||| |||    
T  24529366 atccttttgaagtcaaaccaacggcattagaaaggtaacatccatacctacaacttttgtgtttacacctaagaccaattttgtaccaatcaatacaagt 24529267  T
Q  101 ttttatttcaaatt 114  Q
    ||| |||| |||||    
T  24529266 tttcattttaaatt 24529253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 32214552 - 32214393
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| | |||||| ||||||||||||||||||||| |||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||     
T  32214552 ttttgacgtcagagcaacggcattagaaagctaacatccatacctacaactttcgtgttatcacctaagaccaattttgtaccaatcaataccagttttc 32214453  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||| ||||||| | |||| ||   |||||||||||| |||| |||  ||| ||||||||    
T  32214452 attttaaattcggggcagagatgaaaagaaaaatcagaaaaagcaatctatattattcaa 32214393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 38967825 - 38967938
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||||| || ||   |||||||||||||| |||||| |||||||||||||||    
T  38967825 cttttgaagtcaaaccaacgacattagaaacctaacatccatatctacaactttcgtatttacacctaagaccaattatgtaccaatcaataccagtttt 38967924  T
Q  104 tatttcaaattcga 117  Q
     |||||||||||||    
T  38967925 catttcaaattcga 38967938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 26505724 - 26505836
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   |||||||| |||||||||||| |||||||||||||||    
T  26505724 cttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagatcaattctgtaccaatcaataccagtttt 26505823  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  26505824 catttcaaattcg 26505836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 26508202 - 26508314
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||| ||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||    
T  26508202 cttttgaagtcaaactaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagtttt 26508301  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  26508302 catttcaaattcg 26508314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 571740 - 571855
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||| ||||||||||||  ||||||||||||||||  ||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  571740 atccttttgacgtcaaaccaacgacattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagt 571839  T
Q  101 ttttatttcaaattcg 116  Q
    ||||||||||||||||    
T  571840 ttttatttcaaattcg 571855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 21154823 - 21154712
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||    |||||||| ||||||||||| |||||||||||||||     
T  21154823 ttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacccctaagacaaattctgtaccaatcaataccagttttc 21154724  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  21154723 atttcaaattcg 21154712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24898015 - 24897900
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||| |||||||||| |||||   ||||| |||||||| |||||| ||||||||||||    
T  24898015 atccttttgaagtcaaactaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctatgaccaattatgtaccaatcaataccagt 24897916  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  24897915 tttcatttcaaattcg 24897900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24900498 - 24900383
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||| |||||||||| |||||   ||||| |||||||| |||||| ||||||||||||    
T  24900498 atccttttgaagtcaaactaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctatgaccaattatgtaccaatcaataccagt 24900399  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  24900398 tttcatttcaaattcg 24900383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24902975 - 24902860
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||| |||||||||| |||||   ||||| |||||||| |||||| ||||||||||||    
T  24902975 atccttttgaagtcaaactaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctatgaccaattatgtaccaatcaataccagt 24902876  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  24902875 tttcatttcaaattcg 24902860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24905452 - 24905337
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||| |||||||||| |||||   ||||| |||||||| |||||| ||||||||||||    
T  24905452 atccttttgaagtcaaactaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctatgaccaattatgtaccaatcaataccagt 24905353  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  24905352 tttcatttcaaattcg 24905337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24918483 - 24918598
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||   || ||||||||||||| |||| ||||||| ||||    
T  24918483 atccttttgaagtcaaaccaacggaattagaaagctaacatccatacctacaactttcatgtttacacttaagaccaattctctaccaatcaatatcagt 24918582  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  24918583 tttcatttcaaattcg 24918598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 41523695 - 41523584
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    ||||||||||||||||| || |||| |||| ||||||||||| ||||||| || |||||   ||||||||||||||||||||| ||||||||||||||||    
T  41523695 ttttgaagtcaaaccaagggcattataaagataacatccatacctacaaccttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttt 41523596  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  41523595 atttcaaattcg 41523584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41523892 - 41523777
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||   ||||||||||||||| |||| |||||||||| |||||   ||||||||| ||||||||||| ||||||||||||    
T  41523892 atccttttgaagtcaaaccaacgacgttagaaagctaacattcatacctacaactttcgtgtttacacctaagactaattctgtaccaatcaataccagt 41523793  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  41523792 tttcatttcaaattcg 41523777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6726390 - 6726505
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  |||||||||||||||| |||| |||||||||| |||||   ||||||||||| || |||| | ||||||||||||    
T  6726390 atccttttgaagtcaaaccaacgacattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccacttatgtatcaatcaataccagt 6726489  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  6726490 tttcatttcaaattcg 6726505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24671368 - 24671483
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||||||||||||   ||||||||||||||||||||| |||||||||| || ||   ||||||||||||||||||||| || |||||||||    
T  24671368 atccttttgaagtcaaaccaacaacattagaaagctaacatccatacctacaactttcgtttttacacctaagaccaattctgtaccaataaataccagt 24671467  T
Q  101 ttttatttcaaattcg 116  Q
    ||  ||||||||||||    
T  24671468 ttgcatttcaaattcg 24671483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24907927 - 24907812
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||| ||||||||||  ||||   ||||| |||||||| |||||| ||||||||||||    
T  24907927 atccttttgaagtcaaactaacggcattagaaagctaacattcatacctacaactttcatgtttacacctatgaccaattatgtaccaatcaataccagt 24907828  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  24907827 tttcatttcaaattcg 24907812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 23932000 - 23932159
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| |||||   |||||||||||||||| |||| ||||||||||| |||     
T  23932000 ttttgacgtcagaccaacgaaattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctataccaatcaataccagctttc 23932099  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||  | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  23932100 atttcaaattcagggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 23932159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 21154630 - 21154519
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||| |||||||||| || | |||||||||||||||     
T  21154630 ttttgacgtcagaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaggaccaattctataacaatcaataccagttttc 21154531  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  21154530 atttcaaattcg 21154519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32039318 - 32039203
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||| ||  ||| |||||||||| |||||   ||||||||||||| || |||| ||||||||||||    
T  32039318 atccttttgaagtcaaaccaacggcaatagaaagctaaaatttatacctacaactttcgtgtttacacctaagaccaatcctttaccaatcaataccagt 32039219  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  32039218 tttcatttcaaattcg 32039203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 24681787 - 24681901
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||| |||| | ||||||||  ||||||||||||||||||||| |||||||||| |||||   | ||||||||||||||||||| | ||||||||||    
T  24681787 atcctttggaagcccaaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacagctaagaccaattctgtaccaaccaataccagt 24681886  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  24681887 tttcatttcaaattc 24681901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 24918680 - 24918790
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||||||||||||| ||||||||||| |||||||||| |||||   ||||||||||||||||  ||| ||||||||||| |||     
T  24918680 ttttgacgtcagaccaacggtattagaaagataacatccatacctacaactttcgtgtttacacctaagaccaattcttgacctatcaataccagatttc 24918779  T
Q  105 atttcaaattc 115  Q
    |||||||||||    
T  24918780 atttcaaattc 24918790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 24368378 - 24368525
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||   |||||||||||| | |  ||| ||||||||||| ||| ||||||||||||    
T  24368378 accaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaactattgacctatcaataccagatttcatttcaaattcg 24368477  T
Q  117 agacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
     | |||| ||   |||||||||||| |||| |||||||| ||||||||    
T  24368478 gggcagagatgaaaagaaaaatcagaaaaagcaacttatattattcaa 24368525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 24681984 - 24682143
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| || ||||| ||||||| ||||||||||| | ||||||||||||||||   ||||||||||||||||| ||| ||||||||||| |||     
T  24681984 ttttgatgtcagactaacggcattagaatgctaacatccacacctacaacttttgtgtttacacctaagaccaattctggacctatcaataccagatttc 24682083  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| |  ||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  24682084 atttcaaattcgggggagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 24682143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 23706627 - 23706502
Alignment:
Q  26 attagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcgagacagaaa 125  Q
    ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||| ||| ||||||||||| ||| |||||||||||| | |||| |    
T  23706627 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagatttcatttcaaattcgggccagaga 23706528  T
Q  126 t---aagaaaaatcaggaaaaacaac 148  Q
    |   |||||||||||| |||| ||||    
T  23706527 tgaaaagaaaaatcagaaaaagcaac 23706502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 24529169 - 24529058
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||  | ||| ||||||||||| |||     
T  24529169 ttttgacgtcataccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattaaggacctatcaataccagatttc 24529070  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  24529069 atttcaaattcg 24529058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 6726587 - 6726746
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||  ||| |||||||  || |||     
T  6726587 ttttgacgtcagaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattcttgacctatcaatatgagatttc 6726686  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| || |||||    
T  6726687 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatatttttcaa 6726746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 21154425 - 21154278
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||  ||| |||||||| || ||| ||||||||||||    
T  21154425 accaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctagacctatcaatactagatttcatttcaaattcg 21154326  T
Q  117 agacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
     | |||| ||   |||||||||||| |||| ||||  || ||||||||    
T  21154325 gggcagagatgaaaagaaaaatcagaaaaagcaacccatattattcaa 21154278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 24671565 - 24671724
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| ||||||  || || ||||||||||||||||||| | ||||||||||||||||   ||||||||||||||||| ||  ||||||||||| |||     
T  24671565 ttttgatgtcaaataaatggcattagaaagctaacatccacacctacaacttttgtgtttacacctaagaccaattctggacatatcaataccagatttc 24671664  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    ||| |||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  24671665 attccaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 24671724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 41523502 - 41523343
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| |||||   || ||||||||||| || ||| ||||||||||| |||     
T  41523502 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacacgtaagaccaattatggacctatcaataccagatttc 41523403  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   || ||||||||| |||| |||| ||| ||||||||    
T  41523402 atttcaaattcggggcagagatgaaaaaaaaaatcagaaaaagcaacctatattattcaa 41523343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 23706840 - 23706729
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||| |||| ||||||||| ||||||||||| ||| |||||| |||||   ||||||||||||||||||||| ||||||| | |||||     
T  23706840 ttttgacgtcagacctacggcattagaaaggtaacatccataactataactttcgtgtttacacctaagaccaattctgtaccaatcaatagccgttttc 23706741  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  23706740 atttcaaattcg 23706729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 23709155 - 23709048
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| |||||||| |||||||||||| |||||||||  |||||   ||||| ||| |||||||| || |||||||||||||||     
T  23709155 ttttgacgtcagaccaacggcattagaaatctaacatccatacctacaacttacgtgtttacacctaggacgaattctgtgccaatcaataccagttttc 23709056  T
Q  105 atttcaaa 112  Q
    ||||||||    
T  23709055 atttcaaa 23709048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 45027527 - 45027418
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||| |||| |||||||||||| ||||||||||||||||   ||||||||||||||||| ||| ||||| ||||| ||      
T  45027527 ttttgacgtcagaccaacgacattcgaaatctaacatccatacctacaacttttgtgtttacacctaagaccaattctggacctatcaacaccagattcc 45027428  T
Q  105 atttcaaatt 114  Q
    ||||||||||    
T  45027427 atttcaaatt 45027418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 31345570 - 31345637
Alignment:
Q  49 tacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||| |||||   |||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  31345570 tacaactttcgtgtttacacctaagatcaattctgtaccaatcaataccagttttcatttcaaattcg 31345637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 25616528 - 25616580
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttt 57  Q
    |||||| |||| |||||||  ||||||||||||||||||||| ||||||||||    
T  25616528 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaacttt 25616580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 34135119 - 34135071
Alignment:
Q  9 gaagtcaaaccaacggtattagaaagctaacatccatatctacaacttt 57  Q
    ||||||||||||| |  |||||||||||||| |||||| ||||||||||    
T  34135119 gaagtcaaaccaaagcaattagaaagctaacttccatacctacaacttt 34135071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 17516983 - 17516869
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  17516983 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 17516884  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  17516883 tttcatttcaaattc 17516869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 264588 - 264473
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||| |||||||  ||| ||||||||||||||||   ||||||||||||||||||||| ||||||||||||    
T  264588 atccttttgaagtcaaaccaacggcattagaaatctaacatttatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagt 264489  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  264488 tttcatttcaaattcg 264473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2154451 - 2154336
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||| || |||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  2154451 atccttttgaagtcaaaccaacggcattagaaagctaatattcatacctacaactttagtgtttacacctaagaccaattctgtaccaatcaataccagt 2154352  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  2154351 tttcatttcaaattcg 2154336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20917666 - 20917551
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  20917666 atccttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 20917567  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||| ||||||    
T  20917566 tttcatttcgaattcg 20917551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29330325 - 29330440
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||| |||||||||| | |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  29330325 atccttttgaaatcaaaccaacagcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 29330424  T
Q  101 ttttatttcaaattcg 116  Q
    ||||||||||||||||    
T  29330425 ttttatttcaaattcg 29330440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10732760 - 10732645
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  10732760 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagt 10732661  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  10732660 tttcatttcaaattcg 10732645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 20901740 - 20901629
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||  ||||   ||||||||||||||||||||| ||||||||||||    
T  20901740 atccttttgaagtcaaaccaacggcattagaaatctaacatccatacctacaactttcatgtttacacctaagaccaattctgtaccaatcaataccagt 20901641  T
Q  101 ttttatttcaaa 112  Q
    ||| ||||||||    
T  20901640 tttcatttcaaa 20901629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20909354 - 20909469
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  20909354 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagt 20909453  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  20909454 tttcatttcaaattcg 20909469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 29346326 - 29346437
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  29346326 ttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 29346425  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  29346426 atttcaaattcg 29346437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32027788 - 32027903
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||||  ||||   ||||||||||||||||||||| ||||||||||||    
T  32027788 atccttttgaagtcaaaccaacggcattagaaatctaacattcatacctacaactttcttgtttacacctaagaccaattctgtaccaatcaataccagt 32027887  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  32027888 tttcatttcaaattcg 32027903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38619779 - 38619889
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | |||||| |||||||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  38619779 atccttttgaagtcaaaccaacggcactagaaatctaacatccatacctacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagt 38619878  T
Q  101 ttttatttcaa 111  Q
    |||||||||||    
T  38619879 ttttatttcaa 38619889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 37804722 - 37804609
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   |||||||||||||| |||||| |||||| |||||    
T  37804722 atccttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaatgccagt 37804623  T
Q  101 ttttatttcaaatt 114  Q
    ||| ||||||||||    
T  37804622 tttcatttcaaatt 37804609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23064856 - 23064971
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||| ||||| | ||||||||| ||||||||| |||||||||| |||||   | ||||||||||||||||||| ||||||||||||    
T  23064856 atccttttgaagtcaaacgaacggcactagaaagctgacatccatacctacaactttcgtgtttatatctaagaccaattctgtaccaatcaataccagt 23064955  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  23064956 tttaatttcaaattcg 23064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 29348799 - 29348910
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||| ||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  29348799 ttttgaagtcaaaccaacggcatttgaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 29348898  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  29348899 atttcaaattcg 29348910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 29351272 - 29351383
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||| ||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  29351272 ttttgaagtcaaaccaacggcatttgaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 29351371  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  29351372 atttcaaattcg 29351383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 39245478 - 39245593
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   || ||||||||||| |||||| ||||||||||||    
T  39245478 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacataagaccaattatgtaccaatcaataccagt 39245577  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  39245578 tttcatttcaaattcg 39245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 17516581 - 17516433
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||||| ||||| ||||||||||||    
T  17516581 accaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccggttttcatttcaaattcg 17516482  T
Q  117 agacagaaat---aagaaaaatcaggaaaaa-caacttatgttattcaa 161  Q
     | |||| ||   |||||||||||||||||| |||| ||| ||||||||    
T  17516481 gggcagagatgaaaagaaaaatcaggaaaaagcaacctatattattcaa 17516433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 20901543 - 20901384
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||| ||||||||| ||||||| || |||||   |||||||||||||| |||||| |||||||||||||||     
T  20901543 ttttgacgtcagaccaacggcattagaaagctgacatccatacctacaacgttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttc 20901444  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  20901443 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 20901384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 296090 - 295979
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttata-acctaagaccaattctgtaccgatcaataccagtttt 103  Q
    |||||| |||| |||||||  ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| ||||||| |||||||    
T  296090 ttttgacgtcagaccaacgtcattagaaagctaacatccatacctacaacttttgtgt-atacacctaagaccaattctgtaccaatcaatatcagtttt 295992  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  295991 catttcaaattcg 295979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42245185 - 42245070
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||| ||||||||||||||||||| |||||||| |||||||  ||| |||||||||| |||||   ||||||||||||||||||| | ||||||||||||    
T  42245185 atccatttgaagtcaaaccaacggcattagaaatctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtatcaatcaataccagt 42245086  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  42245085 tttcatttcaaattcg 42245070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 39363731 - 39363837
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    ||||||||||||| |||||| | ||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||||||     
T  39363731 ttttgaagtcaaatcaacggcactagaaagctaacatccatacctacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttc 39363830  T
Q  105 atttcaa 111  Q
    |||||||    
T  39363831 atttcaa 39363837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 29330522 - 29330681
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||||||  |||||||||||||||||||| ||||||||||||||||   ||||||||||||||||  ||| ||||||||||| |||     
T  29330522 ttttgacgtcagaccaacggccttagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattcttgacctatcaataccagatttc 29330621  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| ||||  ||| ||| ||||||||    
T  29330622 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagtaacctatattattcaa 29330681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 2154254 - 2154095
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  |||| |||||||||||||||| |||||||||| |||||   ||||||||||||||||| ||| ||||||||||| |||     
T  2154254 ttttgacgtcagaccaacgacattaaaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagatttc 2154155  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||| | | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  2154154 atttcaaatttggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 2154095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 32028189 - 32028290
Alignment:
Q  15 aaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaatt 114  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||  ||| ||||||||||| ||| ||||||||||    
T  32028189 aaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattcttgacctatcaataccagatttcatttcaaatt 32028288  T
Q  115 cg 116  Q
    ||    
T  32028289 cg 32028290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 32028565 - 32028724
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||||| |||||||||||||||||||||| |||||||||| |||||   |||||||||||||| |  ||| ||||||||||| |||     
T  32028565 ttttgatgtcagaccaacgatattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaatttttgacctatcaataccagatttc 32028664  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||  | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  32028665 atttcaaattcagggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 32028724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 32028372 - 32028483
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||| | | ||||||||||||||  ||| |||||||||| ||||| | |||||| |||||||||||||| |||||||||||||||     
T  32028372 ttttgacgtcagaccaacagcactagaaagctaacatatatacctacaactttcgtgttttcacctaaaaccaattctgtaccaatcaataccagttttc 32028471  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  32028472 atttcaaattcg 32028483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 32027997 - 32028096
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||| || |||||||||||||||||||||  ||||| |||||||||   ||||||||||||||||||||| ||||||| || |||| ||||||||||||    
T  32027997 accaatggcattagaaagctaacatccataaatacaatttttgtgtttacacctaagaccaattctgtaccaatcaataacaattttcatttcaaattcg 32028096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 17516786 - 17516683
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||||||||||||||||| |||||||||| |||||   ||||| |||||||||||| || |||||||||| ||||     
T  17516786 ttttgacgtcagaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacacctaggaccaattctgtgccaatcaataccatttttc 17516687  T
Q  105 attt 108  Q
    ||||    
T  17516686 attt 17516683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 295897 - 295738
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| | |||||  |||||||||||||||| |||| ||||||||||  || |   |||||||||| |||| | ||  ||||||||||| |||     
T  295897 ttttgatgtcagatcaacgacattagaaagctaacattcatacctacaactttcatggttacacctaagacctattccggacttatcaataccagatttc 295798  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| |||||| ||   |||||||||||| |||| |||||||| ||||||||    
T  295797 atttcaaattcgggacagagatgaaaagaaaaatcagaaaaagcaacttatattattcaa 295738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 20917469 - 20917310
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||| ||| |||||||||||||||| |||| |||||||||| |||||   |||||||| ||||| || ||| ||||||||| | |||     
T  20917469 ttttgacgtcagaccagcggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagatcaattatggacctatcaatacctgatttc 20917370  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| ||||  || ||||||||    
T  20917369 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacccatattattcaa 20917310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9776701 - 9776781
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattc 81  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||||||  ||||   ||| |||||||||||    
T  9776701 atccttttgaagtcaaaccaacggtattagaaagctaacataattatctacaactttcatgtttacaccaaagaccaattc 9776781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 23280331 - 23280299
Alignment:
Q  31 aaagctaacatccatatctacaacttttgtgtt 63  Q
    |||||||||||| ||||||||||||||||||||    
T  23280331 aaagctaacatcaatatctacaacttttgtgtt 23280299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 40742 - 40857
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  40742 atccttttgaagtcaaaccaacggcattagaaagctaacatttatatctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 40841  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  40842 tttaatttcaaattcg 40857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 94753 - 94868
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  94753 atccttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 94852  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  94853 tttcatttcaaattcg 94868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 17050 - 16903
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||  ||||||||||||||||||||| |||||||||| |||||||  ||||| || ||||||||||| ||||||||||||||| |||||||||| |    
T  17050 accaacgacattagaaagctaacatccatacctacaactttcgtgttatcccctaacacaaattctgtaccaatcaataccagttttcatttcaaatttg 16951  T
Q  117 agacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
     | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  16950 gggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 16903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 17255 - 17144
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| |||||||||||||||   ||| |||||||||| |||||   |||||||||||||||| |||| |||||||| ||||||     
T  17255 ttttgaagtcaaaccaacggcattagaaagctaacaaaaatacctacaactttcgtgtttacacctaagaccaattctataccaatcaatacaagttttc 17156  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  17155 atttcaaattcg 17144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 79; Significance: 4e-37; HSPs: 3)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8082 - 8196
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||  ||||||||||||    
T  8082 atccttttgaagtcaaaccaacggaattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtactaatcaataccagt 8181  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  8182 tttcatttcaaattc 8196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 8279 - 8390
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||   ||||||||||| || |||||| |||||||||||||||     
T  8279 ttttgacgtcaaaccaaggggattagaaagctaacatccatatctacaacttttgtgtttacacctaagaccagttatgtaccaatcaataccagttttc 8378  T
Q  105 atttcaaattcg 116  Q
    |||||| |||||    
T  8379 atttcacattcg 8390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 8472 - 8631
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||||   || ||||||||||| |||||| ||||||||||||||      
T  8472 ttttgacgtcataccaatggaattagaaagctaacatccatatctacaacttttgtgtttacacgtaagaccaattatgtaccaatcaataccagtttcc 8571  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   ||||||||| || |||| |||| ||| ||||||||    
T  8572 atttcaaattcggggcagagatgaaaagaaaaattagaaaaagcaacctatattattcaa 8631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6289 - 6404
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| || |||||||||    
T  6289 atccttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatgaataccagt 6388  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  6389 tttcatttcaaattcg 6404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13735 - 13850
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||  ||| ||||||||||||||||   ||||||||||||||||||||| ||||||||||||    
T  13735 atccttttgaagtcaaaccaacggcattagaaagataacatttatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagt 13834  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  13835 tttcatttcaaattcg 13850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38164 - 38279
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  38164 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 38263  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  38264 tttcatttcaaattcg 38279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13989208 - 13989323
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  13989208 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 13989307  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  13989308 tttcatttcaaattcg 13989323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 21841113 - 21841224
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  21841113 ttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 21841212  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  21841213 atttcaaattcg 21841224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21923111 - 21922996
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  21923111 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 21923012  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  21923011 tttcatttcaaattcg 21922996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 15859825 - 15859713
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||| ||| |   ||||||||||||||||||||| |||||||||||||||    
T  15859825 cttttgaagtcaaaccaacggcattagaaaactaacatccatacctacaactttcgtgcttacacctaagaccaattctgtaccaatcaataccagtttt 15859726  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  15859725 catttcaaattcg 15859713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29298584 - 29298700
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||||||||||| || |||||||||||||||| |||| |||||||||| |||||   |||||||||||||| |||||| ||||||||||||    
T  29298584 atccttttgaagtcaaaccaatggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagt 29298683  T
Q  101 ttttatttcaaattcga 117  Q
    ||| |||||||||||||    
T  29298684 tttcatttcaaattcga 29298700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 43543269 - 43543407
Alignment:
Q  26 attagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcgagacagaaa 125  Q
    ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||||| |||||||||||| | |||| |    
T  43543269 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggggcagaga 43543368  T
Q  126 t---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |   |||||||||||| |||| |||||||| ||||||||    
T  43543369 tgaaaagaaaaatcagaaaaatcaacttatattattcaa 43543407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13227206 - 13227321
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||  || |||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  13227206 atccttttgaagtcaaaccaacggcactagaaagctaacatccatacataaaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagt 13227305  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  13227306 tttcatttcaaattcg 13227321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16362261 - 16362376
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||| | |||||||||||||| |||||| |||||||||| |||||   ||| ||||||||||||||||| ||||||||||||    
T  16362261 atccttttgaagtcaaaccaaccgcattagaaagctaacttccatacctacaactttcgtgtttacacccaagaccaattctgtaccaatcaataccagt 16362360  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  16362361 tttcatttcaaattcg 16362376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 29777287 - 29777390
Alignment:
Q  12 gtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaa 111  Q
    |||| |||||||| |||||||||||||||| |||| ||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||    
T  29777287 gtcagaccaacggcattagaaagctaacatacatacctacaacttttgtgtttacacctaagactaattctgtaccgatcaataccagtttttatttcaa 29777386  T
Q  112 attc 115  Q
    ||||    
T  29777387 attc 29777390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 16401484 - 16401572
Alignment:
Q  28 tagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||||||||||||| |||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16401484 tagaaagctaacatccatacctacaacttttgtgtctacacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 16401572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21474906 - 21474791
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||| ||    
T  21474906 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccggt 21474807  T
Q  101 ttttatttcaaattcg 116  Q
    ||| |||||| |||||    
T  21474806 tttcatttcatattcg 21474791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 22122830 - 22122719
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||||||||  ||||   ||||||||||||||||| ||| |||||||||||||||     
T  22122830 ttttgaagtcaaaccaacggcattagaaagctagcatccatacctacaactttcatgtttacacctaagaccaattctggacctatcaataccagttttc 22122731  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  22122730 atttcaaattcg 22122719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29777083 - 29777198
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||| |||||||||| ||| |   |||||||||||||| |||||| ||||||||||||    
T  29777083 atccttttgaagtcaacccaacgacattagaaagctaacatccatacctacaactttcgtgattacacctaagaccaattatgtaccaatcaataccagt 29777182  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  29777183 tttcatttcaaattcg 29777198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31612708 - 31612823
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  ||| |||||||||||| |||| |||||||||| |||||   ||||||||||||||| ||||| ||||||||||||    
T  31612708 atccttttgaagtcaaaccaacgacatttgaaagctaacattcatacctacaactttcgtgtttacacctaagaccaattcggtaccaatcaataccagt 31612807  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  31612808 tttcatttcaaattcg 31612823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 22122637 - 22122477
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaactttt-gtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||   ||||||||||||||||| ||| ||||||||||| |||    
T  22122637 ttttgaagtaaaaccaacggcattagaaagctaacatccatacctacaacttttagtgtttacacctaagaccaattctggacctatcaataccagattt 22122538  T
Q  104 tatttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
     |||||||||||| | |||| ||   |||||||||||| |||| ||||  || ||||||||    
T  22122537 catttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacccatattattcaa 22122477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 27161402 - 27161292
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| ||||||||| |||||     
T  27161402 ttttgaagtcaaaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaatacctgttttc 27161303  T
Q  105 atttcaaattc 115  Q
    |||||||||||    
T  27161302 atttcaaattc 27161292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 15859618 - 15859507
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttata-acctaagaccaattctgtaccgatcaataccagtttt 103  Q
    |||||| |||| |||||||  |||||||||||||||| |||| |||||||||| |||| ||| ||||||||||||||||||||| |||||||||||||||    
T  15859618 ttttgaggtcagaccaacgacattagaaagctaacattcatacctacaactttcgtgt-atacacctaagaccaattctgtaccaatcaataccagtttt 15859520  T
Q  104 tatttcaaattcg 116  Q
    |||||||||||||    
T  15859519 tatttcaaattcg 15859507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 29535397 - 29535509
Alignment:
Q  4 cttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttt 103  Q
    ||||||||||||||||||||  | |||||||||||||||||||  ||||||||| |||||   |||||||||||||| |||||| |||||||||||||||    
T  29535397 cttttgaagtcaaaccaacgacactagaaagctaacatccatacatacaactttcgtgtttatacctaagaccaattatgtaccaatcaataccagtttt 29535496  T
Q  104 tatttcaaattcg 116  Q
     ||||||||||||    
T  29535497 catttcaaattcg 29535509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 9044808 - 9044711
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaatt 114  Q
    |||||||| |||||||| ||||||| |||| |||||||||| |||||   ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9044808 accaacggcattagaaaactaacatacatacctacaactttcgtgtttacacctaagactaattctgtaccgatcaataccagtttttatttcaaatt 9044711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 29298781 - 29298892
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| | |||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||| ||| ||||||||||| |||     
T  29298781 ttttgacgtcagaacaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagatttc 29298880  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  29298881 atttcaaattcg 29298892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 31612905 - 31613015
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||| | ||||||| ||| |||||| |||||   |||||||||||||||| |||| |||||||||||||||     
T  31612905 ttttgaagtcaaaccaacggcattagaaagcttaaatccatacctataactttagtgtttacacctaagaccaattctataccaatcaataccagttttc 31613004  T
Q  105 atttcaaattc 115  Q
    | |||||||||    
T  31613005 agttcaaattc 31613015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 31613098 - 31613257
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||||||||||||||| |||||||||||| |||||||||| |||||   |||||||||||||| || ||| ||||||||||  |||     
T  31613098 ttttgacgtcagaccaacggtattagaaacctaacatccatacctacaactttcgtgtttacacctaagaccaattatgaacctatcaataccatatttc 31613197  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| ||||  || ||||||||    
T  31613198 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacccatattattcaa 31613257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16275076 - 16274960
Alignment:
Q  1 atccttttgaagtcaaaccaacggtatt-agaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccag 99  Q
    ||||||||||||| ||||||| |  ||| |||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||    
T  16275076 atccttttgaagtgaaaccaatgacatttagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccag 16274977  T
Q  100 tttttatttcaaattcg 116  Q
    |||| ||||| ||||||    
T  16274976 ttttcatttccaattcg 16274960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 22050631 - 22050493
Alignment:
Q  26 attagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcgagacagaaa 125  Q
    ||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||| ||| ||||||||||| ||| |||||||||| | | |||| |    
T  22050631 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagatttcatttcaaatttggggcagaga 22050532  T
Q  126 t---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |   |||||||||||| |||| |||| ||| ||||||||    
T  22050531 tgaaaagaaaaatcagaaaaagcaacctatattattcaa 22050493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 16274878 - 16274767
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| | |||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||| ||| ||||| ||||| ||      
T  16274878 ttttgacgtcagaccaatgatattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaacaccagattcc 16274779  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  16274778 atttcaaattcg 16274767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 23593549 - 23593442
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| |||||||||||||||| |||| ||||||||||  ||||   ||||||||| |||| || ||| |||||||||||||||     
T  23593549 ttttgacgtcagaccaacggcattagaaagctaacatacatacctacaactttcttgtttacacctaagactaattatgcaccaatcaataccagttttc 23593450  T
Q  105 atttcaaa 112  Q
    ||||||||    
T  23593449 atttcaaa 23593442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 27161209 - 27161118
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaatac 96  Q
    |||||| |||| |||||| ||||||||||||||||||||||| ||||||||||  ||||   ||||||||||||||||| ||| ||||||||    
T  27161209 ttttgacgtcagaccaacagtattagaaagctaacatccatacctacaactttcctgtttacacctaagaccaattctggacctatcaatac 27161118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 40129443 - 40129542
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||  |||||||| ||||||| |||| |||||||||| |||||   |||||||| |||||||| ||| ||||||||||  ||| ||||||||||||    
T  40129443 accaacgacattagaaatctaacattcatacctacaactttagtgtttacacctaagatcaattctggacctatcaataccatatttcatttcaaattcg 40129542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 10812816 - 10812710
Alignment:
Q  10 aagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttc 109  Q
    |||||||||||| || | | |||||||||||    ||||||| |||||  ||||   |||||||| |||||| ||||||||||||||||||||| |||||    
T  10812816 aagtcaaaccaaaggcactggaaagctaacacaattatctacgactttcatgtttacacctaagatcaattcagtaccgatcaataccagttttaatttc 10812717  T
Q  110 aaattcg 116  Q
    |||||||    
T  10812716 aaattcg 10812710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 43630342 - 43630245
Alignment:
Q  67 acctaagaccaattctgtaccgatcaataccagtttttatttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||| |||||||||||||||| ||||||||||  ||| |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  43630342 acctgagaccaattctgtaccaatcaataccatatttcatttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 43630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 16401338 - 16401379
Alignment:
Q  75 ccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||| |||||||| ||||||||||||| ||||||||||||    
T  16401338 ccaattttgtaccgaccaataccagttttcatttcaaattcg 16401379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 18000 - 18110
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| |||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||| |||||||||||||||     
T  18000 ttttgacgtcagaccaatggtattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 18099  T
Q  105 atttcaaattc 115  Q
    |||||||||||    
T  18100 atttcaaattc 18110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 18477 - 18636
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| |  ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||| |||||||||||||||     
T  18477 ttttgacgtcagaccaatgacattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 18576  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  18577 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 18636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 907 - 1018
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||| ||||||||||| |||     
T  907 ttttgacgtcagaccaacggcattagaaagctaacatccatatctacaacttttgtgtttacacctaagaccaattttgtaccaatcaataccagatttc 1006  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  1007 atttcaaattcg 1018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 554 - 663
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||   |||| |||| |||||| || | || ||||||||||||     
T  554 ttttgaagtcaaaccaacggcattagaaagctaacatctatacctacaacttttgtgtttacaccttagactaattctatatcaataaataccagttttc 653  T
Q  105 atttcaaatt 114  Q
    ||||||||||    
T  654 atttcaaatt 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 72; Significance: 6e-33; HSPs: 3)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 936 - 1047
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||    |||||||| ||| ||||||| ||||||||||||||||    
T  936 ttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttactcctaagacgaatgctgtaccaatcaataccagttttt 1035  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  1036 atttcaaattcg 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 1141 - 1224
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||| |||||| ||||||||||||    
T  1141 accaacggaattagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattatgtaccaatcaataccagt 1224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 1271 - 1407
Alignment:
Q  28 tagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcgagacagaaat- 126  Q
    ||||||||||||||||||| |||||||||| |||||   ||||||||||||||||| ||| |||||||  || ||| |||||||||||| | |||| ||     
T  1271 tagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaatatgagatttcatttcaaattcggggcagagatg 1370  T
Q  127 --aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
      | |||||||||| |||| |||| ||| ||||||||    
T  1371 aaatgaaaaatcagaaaaagcaacatatattattcaa 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 72; Significance: 6e-33; HSPs: 4)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 22993 - 22882
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||| ||||||||||| |||     
T  22993 ttttgacgtcagaccaacggcattagaaagctaacatccatatctacaacttttgtgtttacacctaagaccaattttgtaccaatcaataccagatttc 22894  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  22893 atttcaaattcg 22882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14290 - 14405
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| ||||||| || |||||   |||||||||||||| |||||| ||||||||||||    
T  14290 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaacgttcgtgtttacacctaagaccaattatgtaccaatcaataccagt 14389  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  14390 tttcatttcaaattcg 14405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 23346 - 23237
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||   |||| |||| |||||| || | || ||||||||||||     
T  23346 ttttgaagtcaaaccaacggcattagaaagctaacatctatacctacaacttttgtgtttacaccttagactaattctatatcaataaataccagttttc 23247  T
Q  105 atttcaaatt 114  Q
    ||||||||||    
T  23246 atttcaaatt 23237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 161
Target Start/End: Complemental strand, 20765 - 20667
Alignment:
Q  66 aacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||||||||||||| ||||||| ||| ||| ||||| |||||| | |||| ||   |||||||||||| ||||||||| ||| ||||||||    
T  20765 aacctaagaccaattctgtaccaatcaatatcagatttcatttccaattcggggcagagatgaaaagaaaaatcagaaaaaacaacctatattattcaa 20667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 30362 - 30473
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  ||||   ||| ||||||||||||||||| ||||||||||||    
T  30362 atccttttgaagtgaaaccaacggtattagaaagctaacatccatacctacaactttaatgtttacaccgaagaccaattctgtaccaatcaataccagt 30461  T
Q  101 ttttatttcaaa 112  Q
    ||| ||||||||    
T  30462 tttcatttcaaa 30473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 30559 - 30670
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || ||| ||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||||||     
T  30559 ttttgacgtcacaccaatggcattggaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttc 30658  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  30659 atttcaaattcg 30670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 7505 - 7394
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||   ||| ||||||||||||||||| ||||||||||| |||     
T  7505 ttttgatgtcagaccaacggtattagaaagctaacatccatacctacaacttttgtgtttacacccaagaccaattctgtaccaatcaataccag-tttc 7407  T
Q  105 atttcaaattcga 117  Q
    |||||||||||||    
T  7406 atttcaaattcga 7394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 7313 - 7202
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  ||||||| | ||||||  ||| |||||||||| |||||   |||||||||  ||||| |||| ||||||||||| ||      
T  7313 ttttgacgtcagaccaacgacattagaaggataacatttatacctacaactttcgtgtttacacctaagacatattctttaccaatcaataccagattgc 7214  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  7213 atttcaaattcg 7202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21090 - 21206
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| ||||||||||  ||||   ||||||||||||||||||||| ||||||||||||    
T  21090 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcttgtttacacctaagaccaattctgtaccaatcaataccagt 21189  T
Q  101 ttt-tatttcaaattcg 116  Q
    ||| |||||||||||||    
T  21190 tttctatttcaaattcg 21206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 4122 - 4007
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||  ||||   ||||| ||||||||||||||| ||||||||||||    
T  4122 atccttttgaagtcaaaccaacgacattagaaagctaacatccatacctacacctttcatgtttacacctatgaccaattctgtaccaatcaataccagt 4023  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  4022 tttcatttcaaattcg 4007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 3913 - 3814
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||| ||| |||||||||| |||||   ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  3913 accaacggaattagaaagctaacatcaatacctacaactttcgtgtttccacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcg 3814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 3720 - 3621
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| ||||||||||  ||||   | ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  3720 accaacggcattagaaagctaacatccatacctacaactttcatgtttacagctaagaccaattctgtaccaatcaataccagttttcatttcaaattcg 3621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 5041 - 5152
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    ||||||||||||||||  || ||||||||||||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||||||||     
T  5041 ttttgaagtcaaaccattggaattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttc 5140  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  5141 atttcaaattcg 5152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 5234 - 5393
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| || ||||| |||||||||||| ||||||||||  ||||   |||||||||||||| |||||| ||||||| |||||||     
T  5234 ttttgacgtcagaccaacggcataagaaaactaacatccatacctacaactttcatgtttacacctaagaccaattatgtaccaatcaatatcagttttc 5333  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||    ||||||||||| |||| |||| ||| ||||||||    
T  5334 atttcaaattcggggcagagatgaatagaaaaatcagaaaaagcaacctatattattcaa 5393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 9588 - 9699
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| |||||| ||||||||| |||| |||||||||| |||||   ||||||||||||||||||||| || ||||||||||||     
T  9588 ttttgaagtcaaaccaacggcattagagagctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaataaataccagttttc 9687  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  9688 atttcaaattcg 9699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 1790 - 1904
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  ||||   ||||||||||||||||| ||| |||||||||||     
T  1790 atccttttgaagtcaaaccaacgacattagaaagctaacatccatacctacaactttcttgtttacacctaagaccaattctggacctatcaataccaga 1889  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  1890 tttcatttcaaattc 1904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 1634 - 1712
Alignment:
Q  38 acatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||||| |||| ||||||||||||    
T  1634 acatccatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccaattttcatttcaaattcg 1712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3366 - 3480
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||   | |||||| ||||| |||| | ||||||||||||    
T  3366 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacaactaagaacaattatgtaacaatcaataccagt 3465  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  3466 tttcatttcaaattc 3480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 67; Significance: 6e-30; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10134 - 10248
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||   ||||||||||||  ||||||| |||||||| |||    
T  10134 atccttttgaagtcaaaccaacggcaatagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaacactgtaccaatcaatactagt 10233  T
Q  101 ttttatttcaaattc 115  Q
    ||| |||||||||||    
T  10234 tttcatttcaaattc 10248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 10524 - 10633
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||   |||||||||||||| || ||| ||||||||||| |||     
T  10524 ttttgacgtcagaccaacggtattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattatggacctatcaataccagatttc 10623  T
Q  105 atttcaaatt 114  Q
    | ||||||||    
T  10624 agttcaaatt 10633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 10331 - 10441
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| |||||||| |||||||||||| |||||||||| |||||   || ||||||||||| |||||| |||||||||||||||     
T  10331 ttttgatgtcagaccaacggcattagaaatctaacatccatacctacaactttcgtgttgacacataagaccaattatgtaccaatcaataccagttttc 10430  T
Q  105 atttcaaattc 115  Q
    |||| ||||||    
T  10431 attttaaattc 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 66; Significance: 2e-29; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 43084 - 43197
Alignment:
Q  3 ccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttt 102  Q
    |||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||   ||||||||||||   |||||| ||||||||||||||    
T  43084 ccttttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgtttacacctaagaccaaaaatgtaccaatcaataccagttt 43183  T
Q  103 ttatttcaaattcg 116  Q
    | ||||||||||||    
T  43184 tcatttcaaattcg 43197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 43279 - 43390
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  |||||||||||||||| |||| ||||||||||||||||   ||||||||||||||||  ||| ||||||||||| |||     
T  43279 ttttgacgtcagaccaacgacattagaaagctaacattcatacctacaacttttgtgtttacacctaagaccaattcttgacctatcaataccagatttc 43378  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  43379 atttcaaattcg 43390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13446 - 13384
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgtt 63  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||| |||||||||| |||||    
T  13446 atccttttgaagtcaaaccaacggcactagtaagctaacatccatacctacaactttcgtgtt 13384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 339 - 228
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||  ||||   ||||||||||| || |||||| |||||||||||||||     
T  339 ttttgaagtcaaaccaacggcattagaaagctaacatccatacctataactttcttgtttacacctaagaccatttatgtaccaatcaataccagttttc 240  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  239 atttcaaattcg 228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 19904 - 19793
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || ||||||||||||||||||||| |||||||||||| |||   |||||||||||||||| |||| |||||||||||||||     
T  19904 ttttgacgtcagaccaatggcattagaaagctaacatccatacctacaacttttgcgtttacacctaagaccaattctataccaatcaataccagttttc 19805  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  19804 atttcaaattcg 19793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 33525 - 33628
Alignment:
Q  12 gtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaa 111  Q
    |||| |||||||  |||||||| |||||||||||| ||||||||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||    
T  33525 gtcagaccaacgacattagaaatctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaa 33624  T
Q  112 attc 115  Q
    ||||    
T  33625 attc 33628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 39691 - 39790
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  39691 accaatggcattagaaagctaacatccataactacaacttttgtgtttacacctaagaccaattctgtaccaatcaatatcagttttcatttcaaattcg 39790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 68304 - 68419
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    ||||||||||||||||||||| || | |||||||||||||||||||  ||||||||| |||||   || ||||||||||| |||||| ||||||||||||    
T  68304 atccttttgaagtcaaaccaatggcactagaaagctaacatccatacatacaactttcgtgtttacacataagaccaattttgtaccaatcaataccagt 68403  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  68404 tttcatttcaaattcg 68419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 64; Significance: 4e-28; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 134553 - 134668
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   || ||||||||||| |||||  ||||||||||||    
T  134553 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacttaagaccaattatgtactaatcaataccagt 134652  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  134653 tttcatttcaaattcg 134668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 137022 - 137137
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   || ||||||||||| |||||  ||||||||||||    
T  137022 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacttaagaccaattatgtactaatcaataccagt 137121  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  137122 tttcatttcaaattcg 137137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 139491 - 139606
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   || ||||||||||| |||||  ||||||||||||    
T  139491 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacttaagaccaattatgtactaatcaataccagt 139590  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  139591 tttcatttcaaattcg 139606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 141960 - 142075
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   || ||||||||||| |||||  ||||||||||||    
T  141960 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacttaagaccaattatgtactaatcaataccagt 142059  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  142060 tttcatttcaaattcg 142075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 144429 - 144544
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||| |||||   || ||||||||||| |||||  ||||||||||||    
T  144429 atccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacttaagaccaattatgtactaatcaataccagt 144528  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  144529 tttcatttcaaattcg 144544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 38471 - 38312
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||    ||||||| ||||||| ||| ||||||||| | |||||    
T  38471 ttttgaagtcaaaccaacgacattagaaagctaacatccatacctacaactttcgtgtttagccctaagatcaattctttacggatcaatactaattttt 38372  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||| ||||||| |||| |||| ||| ||||||||    
T  38371 atttcaaattcggggcagagatgaaaagagaaatcagaaaaagcaacctatattattcaa 38312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8361 - 8476
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagt 100  Q
    |||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||  ||||   |||||||| ||||||| |||| ||||||| ||||    
T  8361 atccttttgaagtcaaaccaatagcattagaaagctaacatccatacctacaactttcatgtttacacctaagagcaattctataccaatcaatatcagt 8460  T
Q  101 ttttatttcaaattcg 116  Q
    ||| ||||||||||||    
T  8461 tttcatttcaaattcg 8476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 31550 - 31661
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| ||||| || ||||||||||||||||  ||| |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||     
T  31550 ttttgacgtcagaccaatggcattagaaagctaacattaatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttc 31649  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  31650 atttcaaattcg 31661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 11636 - 11746
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||| ||||||| | ||||||||||||||||||| |||||| | | |||||   |||||||||||||| |||||| |||||||||||||||     
T  11636 ttttgaagtcaacccaacggcaatagaaagctaacatccatacctacaagtatcgtgtttacacctaagaccaattttgtaccaatcaataccagttttc 11735  T
Q  105 atttcaaattc 115  Q
    |||||||||||    
T  11736 atttcaaattc 11746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 501616 - 501763
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||   ||||||||||| ||||  ||| ||||||||||| ||| ||||||||||||    
T  501616 accaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccagttcttgacctatcaataccagatttcatttcaaattcg 501715  T
Q  117 agacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
     | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  501716 gggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 501763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 501412 - 501522
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||||||||||||||||| ||||||||||||||||| ||  |||||||||| |||||   || |||||||||||||||| | ||||||| || ||||     
T  501412 ttttgaagtcaaaccaacggcattagaaagctaacatctat-cctacaactttcgtgtttacacataagaccaattctgtaacaatcaatatcacttttc 501510  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  501511 atttcaaattcg 501522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 6739 - 6640
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||| |||| |||||||||||| |||||||||| |||||   ||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  6739 accaacggcattggaaatctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttcatttcaaattcg 6640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 6558 - 6447
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| |||||||| |||||||||||| |||||||||| |||||   | ||||||||||||||| ||| ||||||||||  |||     
T  6558 ttttgacgtcagaccaacggcattagaaaactaacatccatacctacaactttcgtgtttacagctaagaccaattctggacctatcaataccacatttc 6459  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  6458 atttcaaattcg 6447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 56; Significance: 2e-23; HSPs: 4)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 11143 - 11044
Alignment:
Q  17 accaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    |||||||| ||| |||| |||||||||||| |||||||||| |||||   ||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  11143 accaacggcattggaaatctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttcatttcaaattcg 11044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 15452 - 15610
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||  |||||||||||||| |||||| |||||||||| ||||| ||  ||||||||||||||| ||| || |||||||| |||     
T  15452 ttttgatgtcagaccaacgacattagaaagctaacgtccatacctacaactttcgtgtt-tacactaagaccaattctggacctattaataccagatttc 15550  T
Q  105 atttcaaattcgagacagaaat---aagaaaaatcaggaaaaacaacttatgttattcaa 161  Q
    |||||||||||| | |||| ||   |||||||||||| |||| |||| ||| ||||||||    
T  15551 atttcaaattcggggcagagatgaaaagaaaaatcagaaaaagcaacctatattattcaa 15610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 10962 - 10852
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    |||||| |||| |||||||| |||||||| |||||||||||| |||||||||| |||||   | ||||||||||||||| ||| ||||||||||  |||     
T  10962 ttttgacgtcagaccaacggcattagaaaactaacatccatacctacaactttcgtgtttacagctaagaccaattctggacctatcaataccacatttc 10863  T
Q  105 atttcaaattc 115  Q
    |||||||||||    
T  10862 atttcaaattc 10852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 15269 - 15351
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtacc 87  Q
    |||||| |||| |||| ||| ||||||||||||||||||||| |||||||||| ||| |   |||||||||||| ||||||||    
T  15269 ttttgacgtcagaccagcggcattagaaagctaacatccatacctacaactttcgtggttacacctaagaccaaatctgtacc 15351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1771 - 1827
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttt 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  1771 atccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaacttt 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 75689 - 75609
Alignment:
Q  36 taacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||||| |||||||||| |||||   |||||||||||||| |||||| |||||||| |||||| ||||||||||||    
T  75689 taacatccatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaatactagttttcatttcaaattcg 75609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 53691 - 53612
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaatt 80  Q
    |||| ||||| |||||||||| || ||||||||||||||||||||| |||||||||| |||||   | ||||||||||||    
T  53691 atccctttgacgtcaaaccaatggcattagaaagctaacatccatacctacaactttcgtgtttacagctaagaccaatt 53612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 398 - 477
Alignment:
Q  37 aacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagtttttatttcaaattcg 116  Q
    ||||||||||  ||| ||||| |||||   ||||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  398 aacatccatacgtacgactttcgtgtttacacctaagaccaattctggacctatcaataccagattttatttcaaattcg 477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 113363 - 113474
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagaccaattctgtaccgatcaataccagttttt 104  Q
    ||||| |||||||||||||  ||||||||  ||||||||||| |||||||||   ||||   | | ||| |||| || | ||||||||||||||||||||    
T  113363 ttttggagtcaaaccaacgtcattagaaatgtaacatccatacctacaacttccatgtttacatcaaaggccaaatccgcaccgatcaataccagttttt 113462  T
Q  105 atttcaaattcg 116  Q
    ||||||||||||    
T  113463 atttcaaattcg 113474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 37014 - 36956
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgtt 63  Q
    |||||| |||| |||||||| ||||||||||||||||||||| |||||||||| |||||    
T  37014 ttttgacgtcagaccaacggcattagaaagctaacatccatacctacaactttcgtgtt 36956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 36821 - 36749
Alignment:
Q  5 ttttgaagtcaaaccaacggtattagaaagctaacatccatatctacaacttttgtgttataacctaagacca 77  Q
    |||||| |||| ||||||   ||||||||| ||||||||||| |||||||||| |||||   |||||||||||    
T  36821 ttttgacgtcagaccaacaacattagaaagttaacatccatacctacaactttcgtgtttacacctaagacca 36749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 57824 - 57865
Alignment:
Q  1 atccttttgaagtcaaaccaacggtattagaaagctaacatc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  57824 atccttttgaagtcaaaccaacggcattagaaagctaacatc 57865  T

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