View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10858_low_2 (Length: 526)

Name: NF10858_low_2
Description: NF10858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10858_low_2
NF10858_low_2
[»] chr4 (21 HSPs)
chr4 (68-509)||(1746978-1747419)
chr4 (297-382)||(35723373-35723457)
chr4 (70-258)||(6005818-6006005)
chr4 (303-347)||(40613443-40613487)
chr4 (308-347)||(8423740-8423779)
chr4 (289-347)||(20743300-20743358)
chr4 (297-347)||(36635311-36635361)
chr4 (328-388)||(44132627-44132685)
chr4 (303-347)||(7012059-7012103)
chr4 (303-381)||(22234880-22234957)
chr4 (303-347)||(23293008-23293052)
chr4 (309-380)||(38148716-38148785)
chr4 (297-347)||(903909-903959)
chr4 (309-347)||(22440622-22440660)
chr4 (308-345)||(23861455-23861492)
chr4 (311-352)||(30522932-30522973)
chr4 (311-347)||(16189710-16189746)
chr4 (297-333)||(17345451-17345487)
chr4 (297-345)||(20521873-20521921)
chr4 (303-347)||(24343500-24343544)
chr4 (313-345)||(34200295-34200327)
[»] chr7 (30 HSPs)
chr7 (297-380)||(32308107-32308188)
chr7 (303-381)||(19206043-19206119)
chr7 (297-388)||(6630895-6630984)
chr7 (303-347)||(29787391-29787435)
chr7 (304-381)||(30731031-30731104)
chr7 (297-346)||(11722121-11722170)
chr7 (307-374)||(5548673-5548738)
chr7 (297-371)||(20549778-20549850)
chr7 (297-367)||(22868029-22868097)
chr7 (305-347)||(23191891-23191933)
chr7 (297-347)||(26733291-26733341)
chr7 (297-347)||(27945028-27945078)
chr7 (298-374)||(22602707-22602781)
chr7 (303-387)||(24339635-24339717)
chr7 (303-344)||(28155563-28155604)
chr7 (303-347)||(24289813-24289857)
chr7 (303-347)||(25481895-25481939)
chr7 (297-343)||(10042924-10042970)
chr7 (297-374)||(21828402-21828477)
chr7 (297-347)||(22484012-22484062)
chr7 (309-347)||(32287485-32287523)
chr7 (297-342)||(25791640-25791685)
chr7 (297-381)||(26329372-26329454)
chr7 (318-386)||(35297657-35297723)
chr7 (296-345)||(35861950-35861999)
chr7 (303-339)||(1433447-1433483)
chr7 (315-347)||(2424619-2424651)
chr7 (303-343)||(2425759-2425799)
chr7 (303-343)||(5307253-5307293)
chr7 (303-386)||(23128646-23128727)
[»] chr6 (35 HSPs)
chr6 (295-387)||(10339109-10339200)
chr6 (294-371)||(19040336-19040411)
chr6 (294-387)||(26562673-26562764)
chr6 (297-371)||(7265593-7265665)
chr6 (297-374)||(9027165-9027240)
chr6 (297-347)||(9658866-9658916)
chr6 (297-388)||(16766684-16766773)
chr6 (303-381)||(5000616-5000692)
chr6 (292-346)||(7801179-7801233)
chr6 (303-345)||(9629376-9629418)
chr6 (303-341)||(20371138-20371176)
chr6 (310-374)||(9025491-9025553)
chr6 (298-347)||(17341686-17341735)
chr6 (297-388)||(9107353-9107442)
chr6 (303-343)||(10842525-10842565)
chr6 (297-340)||(5732539-5732582)
chr6 (303-381)||(8931592-8931668)
chr6 (303-345)||(7377972-7378014)
chr6 (297-347)||(7996400-7996450)
chr6 (297-347)||(8022351-8022401)
chr6 (297-347)||(12696311-12696361)
chr6 (297-347)||(13851723-13851773)
chr6 (297-343)||(17841615-17841661)
chr6 (297-347)||(19044451-19044501)
chr6 (311-345)||(30866168-30866202)
chr6 (305-346)||(6665208-6665249)
chr6 (307-387)||(10294104-10294182)
chr6 (294-347)||(13360394-13360447)
chr6 (294-347)||(31959143-31959196)
chr6 (310-347)||(32511688-32511725)
chr6 (297-381)||(34073337-34073419)
chr6 (303-347)||(7977852-7977896)
chr6 (311-347)||(31579247-31579283)
chr6 (303-343)||(33001315-33001355)
chr6 (303-347)||(34595127-34595171)
[»] chr8 (22 HSPs)
chr8 (303-381)||(24362192-24362268)
chr8 (305-381)||(11927076-11927150)
chr8 (303-347)||(34897078-34897122)
chr8 (303-343)||(39954305-39954345)
chr8 (297-387)||(15816113-15816201)
chr8 (297-371)||(31109518-31109590)
chr8 (303-345)||(31236601-31236643)
chr8 (303-371)||(13844596-13844662)
chr8 (310-347)||(18067956-18067993)
chr8 (297-345)||(13436988-13437036)
chr8 (297-345)||(22651963-22652011)
chr8 (303-343)||(27101508-27101548)
chr8 (279-347)||(30271313-30271381)
chr8 (308-347)||(4611532-4611571)
chr8 (297-371)||(4786338-4786410)
chr8 (303-381)||(11944658-11944734)
chr8 (305-347)||(7658458-7658500)
chr8 (303-345)||(27213540-27213582)
chr8 (297-347)||(29510326-29510376)
chr8 (316-371)||(3025557-3025610)
chr8 (310-381)||(25566841-25566910)
chr8 (297-345)||(36934657-36934705)
[»] chr1 (45 HSPs)
chr1 (305-387)||(25361881-25361961)
chr1 (297-347)||(2896143-2896193)
chr1 (297-347)||(36878448-36878498)
chr1 (310-382)||(34371714-34371783)
chr1 (303-374)||(9828037-9828106)
chr1 (303-347)||(10474999-10475043)
chr1 (295-381)||(10572579-10572663)
chr1 (297-347)||(398787-398837)
chr1 (297-347)||(17831553-17831603)
chr1 (297-345)||(6427337-6427385)
chr1 (303-374)||(7918208-7918277)
chr1 (303-347)||(12443482-12443526)
chr1 (294-345)||(1262868-1262919)
chr1 (297-347)||(5376522-5376572)
chr1 (297-351)||(6415019-6415073)
chr1 (303-380)||(17754304-17754379)
chr1 (314-387)||(44482234-44482305)
chr1 (296-345)||(609482-609531)
chr1 (294-347)||(19562643-19562696)
chr1 (303-347)||(113292-113336)
chr1 (311-347)||(10233254-10233290)
chr1 (307-347)||(25098577-25098617)
chr1 (303-347)||(34298429-34298473)
chr1 (297-344)||(9709807-9709854)
chr1 (308-347)||(26238134-26238173)
chr1 (296-347)||(27471588-27471639)
chr1 (294-345)||(38078685-38078736)
chr1 (305-371)||(39953146-39953210)
chr1 (305-347)||(5898288-5898330)
chr1 (297-351)||(9103627-9103681)
chr1 (309-347)||(20157372-20157410)
chr1 (297-347)||(38503307-38503357)
chr1 (297-347)||(40285676-40285726)
chr1 (305-343)||(41877496-41877534)
chr1 (297-338)||(9690303-9690344)
chr1 (303-371)||(29163381-29163447)
chr1 (306-347)||(31015039-31015080)
chr1 (297-346)||(36905984-36906033)
chr1 (310-347)||(40181871-40181908)
chr1 (303-347)||(1486731-1486775)
chr1 (303-347)||(13436451-13436495)
chr1 (311-347)||(19909298-19909334)
chr1 (303-347)||(21378571-21378615)
chr1 (303-343)||(21530682-21530722)
chr1 (303-374)||(34712380-34712449)
[»] chr5 (30 HSPs)
chr5 (288-388)||(3966481-3966579)
chr5 (279-345)||(30098295-30098361)
chr5 (269-345)||(19737506-19737582)
chr5 (303-347)||(28588696-28588740)
chr5 (304-347)||(27932229-27932272)
chr5 (297-387)||(39698528-39698616)
chr5 (297-343)||(27144450-27144496)
chr5 (297-342)||(17123035-17123080)
chr5 (297-345)||(31084310-31084358)
chr5 (297-344)||(2436909-2436956)
chr5 (297-415)||(6035470-6035585)
chr5 (297-347)||(6247609-6247659)
chr5 (297-347)||(6326319-6326369)
chr5 (297-343)||(14674256-14674302)
chr5 (305-343)||(19579696-19579734)
chr5 (297-347)||(21191078-21191128)
chr5 (310-347)||(6471911-6471948)
chr5 (304-345)||(9449463-9449504)
chr5 (294-347)||(21576767-21576820)
chr5 (307-344)||(26716141-26716178)
chr5 (307-344)||(26985881-26985918)
chr5 (311-371)||(30502388-30502446)
chr5 (311-371)||(30542731-30542789)
chr5 (308-384)||(32766930-32767004)
chr5 (311-375)||(36838544-36838606)
chr5 (295-347)||(4344727-4344779)
chr5 (297-372)||(11685926-11685999)
chr5 (303-347)||(34879343-34879387)
chr5 (303-343)||(35017030-35017070)
chr5 (303-335)||(38816729-38816761)
[»] chr2 (23 HSPs)
chr2 (303-347)||(21616755-21616799)
chr2 (296-347)||(21782840-21782891)
chr2 (310-380)||(44860320-44860388)
chr2 (297-342)||(31284035-31284080)
chr2 (307-347)||(37411266-37411306)
chr2 (309-387)||(18889575-18889651)
chr2 (297-347)||(23718013-23718063)
chr2 (297-347)||(24105685-24105735)
chr2 (305-347)||(28677904-28677946)
chr2 (279-347)||(24894357-24894426)
chr2 (297-369)||(31808064-31808134)
chr2 (307-347)||(18276518-18276558)
chr2 (305-347)||(10535781-10535823)
chr2 (303-345)||(18420458-18420500)
chr2 (297-347)||(21374721-21374771)
chr2 (297-347)||(30404872-30404922)
chr2 (307-381)||(36409619-36409689)
chr2 (297-345)||(896198-896246)
chr2 (303-347)||(19573971-19574015)
chr2 (296-352)||(35447904-35447960)
chr2 (297-388)||(36756327-36756416)
chr2 (297-345)||(37558964-37559012)
chr2 (303-347)||(42832298-42832342)
[»] scaffold0004 (1 HSPs)
scaffold0004 (297-347)||(92794-92844)
[»] chr3 (38 HSPs)
chr3 (295-347)||(4987313-4987365)
chr3 (303-382)||(8039824-8039901)
chr3 (303-347)||(8383250-8383294)
chr3 (297-372)||(26290358-26290431)
chr3 (276-351)||(8412963-8413038)
chr3 (303-345)||(5407271-5407313)
chr3 (298-347)||(10690284-10690333)
chr3 (294-347)||(10954936-10954989)
chr3 (303-371)||(49505154-49505220)
chr3 (297-345)||(5441055-5441103)
chr3 (308-371)||(7928448-7928509)
chr3 (303-347)||(12704000-12704044)
chr3 (303-347)||(34307802-34307846)
chr3 (297-345)||(40052319-40052367)
chr3 (297-352)||(2620070-2620125)
chr3 (297-344)||(9800027-9800074)
chr3 (308-374)||(11313797-11313861)
chr3 (304-347)||(14979175-14979218)
chr3 (303-387)||(25064902-25064982)
chr3 (297-347)||(1438791-1438841)
chr3 (297-347)||(21479105-21479155)
chr3 (297-347)||(21720751-21720801)
chr3 (303-387)||(14209106-14209188)
chr3 (307-344)||(24633763-24633800)
chr3 (297-381)||(28678290-28678372)
chr3 (294-347)||(32429402-32429455)
chr3 (303-347)||(4990989-4991033)
chr3 (303-347)||(11493383-11493427)
chr3 (303-347)||(11610514-11610558)
chr3 (297-376)||(11665931-11666008)
chr3 (297-345)||(14829677-14829724)
chr3 (303-347)||(16192772-16192816)
chr3 (303-347)||(23870581-23870625)
chr3 (303-343)||(25074782-25074822)
chr3 (303-347)||(26508103-26508147)
chr3 (303-347)||(28917994-28918038)
chr3 (307-343)||(32804566-32804602)
chr3 (303-347)||(34910310-34910354)
[»] scaffold0036 (1 HSPs)
scaffold0036 (307-381)||(9737-9809)
[»] scaffold1528 (1 HSPs)
scaffold1528 (303-380)||(1028-1103)
[»] scaffold0306 (1 HSPs)
scaffold0306 (297-347)||(13387-13437)
[»] scaffold0152 (1 HSPs)
scaffold0152 (297-347)||(21890-21940)
[»] scaffold0103 (1 HSPs)
scaffold0103 (297-347)||(51798-51848)
[»] scaffold0223 (1 HSPs)
scaffold0223 (303-379)||(20165-20239)
[»] scaffold0044 (1 HSPs)
scaffold0044 (303-347)||(53173-53217)
[»] scaffold0020 (1 HSPs)
scaffold0020 (303-374)||(135309-135378)
[»] scaffold0123 (1 HSPs)
scaffold0123 (310-380)||(44516-44584)
[»] scaffold0110 (1 HSPs)
scaffold0110 (294-345)||(28834-28885)
[»] scaffold0018 (1 HSPs)
scaffold0018 (297-344)||(192274-192321)
[»] scaffold0008 (1 HSPs)
scaffold0008 (311-381)||(263362-263430)
[»] scaffold0003 (1 HSPs)
scaffold0003 (297-387)||(241581-241669)
[»] scaffold0085 (1 HSPs)
scaffold0085 (303-345)||(26386-26428)
[»] scaffold0136 (1 HSPs)
scaffold0136 (307-387)||(3833-3911)
[»] scaffold0024 (1 HSPs)
scaffold0024 (312-388)||(68225-68299)
[»] scaffold0697 (1 HSPs)
scaffold0697 (303-343)||(1637-1677)
[»] scaffold0361 (1 HSPs)
scaffold0361 (303-347)||(14523-14567)
[»] scaffold0066 (1 HSPs)
scaffold0066 (303-347)||(33385-33429)
[»] scaffold0049 (1 HSPs)
scaffold0049 (311-347)||(63774-63810)
[»] scaffold0027 (1 HSPs)
scaffold0027 (303-347)||(46675-46719)


Alignment Details
Target: chr4 (Bit Score: 331; Significance: 0; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 68 - 509
Target Start/End: Original strand, 1746978 - 1747419
Alignment:
Q  68 ataatcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgtaatttataactttgtataacacataactaattgcattatattgcacatt 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1746978 ataatcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgtaatttataactttgtataacacataactaattgcattatattgcacctt 1747077  T
Q  168 atataaaaatcttaacatacaagattactaggaaattatggtgcatagagtaataatcaaatacagaaaatctaagttggcattttcaaagnnnnnnnct 267  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||       ||    
T  1747078 atataaaaatcttaccatacaagattactaggaaattatggtgcatagagtaataatcaaata--------ctaagttggcattttcaaagaaaaaaact 1747169  T
Q  268 agtttcaatcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa--------cattttat 359  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||| |||    
T  1747170 agtttcaatcaatgaagcaaggacaccgagcacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaattatacgttattatat 1747269  T
Q  360 gtgtcagtgtcgtgttggtgtcgaacacatggggacacgcttaatctaaggagtgttgcaggtcaacctcttcaaggaagggaagtcatcgtagtcgtag 459  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||| |    
T  1747270 gtgtcagtgtcgtgttggtgtcgaacacatggggacacgcctaatctaaggagtgttgtaggtcaacctcttcaagggagggaagtcattgtagtcgtgg 1747369  T
Q  460 ctaacaactaggtcgtttttatggagagagtggtcaaagttggaacaagt 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1747370 ctaacaactaggtcgtttttatggagagagtggtcaaagttggaacaagt 1747419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 382
Target Start/End: Complemental strand, 35723457 - 35723373
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaat-cacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 382  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||| | ||  ||| |||||||||||||||| | |||||||    
T  35723457 acactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgta--attatatgtgtcagtgtcgtatcggtgtcg 35723373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 258
Target Start/End: Original strand, 6005818 - 6006005
Alignment:
Q  70 aatcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgtaatttataactttgtataacacataactaattgcattatattgcacattat 169  Q
    |||||| ||||||||||| ||||||||||||||  ||| ||||| || ||||||| |||  ||||||||||  ||||  ||  |||| ||||  ||||||    
T  6005818 aatcaagtccagatgatataattcaagggaaagtgaag-aaaactatataatttaaaacgatgtataacacccaacttgttatattacattgtgcattat 6005916  T
Q  170 ataaaaatcttaacatacaagattactaggaaattatggtgcatagagtaataatcaaatacagaaaatctaagttggcattttcaaag 258  Q
    ||||| || ||| ||||||  |||| | || ||||||| |||| || || | || || |||||  |||||||||||| |||||||||||    
T  6005917 ataaatatgttaccatacacaattaattggcaattatgatgcacagggtgacaaacatatacaacaaatctaagttgacattttcaaag 6006005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 40613443 - 40613487
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  40613443 acacgccgacaccgctaatattttgagaaaatcacataattcagt 40613487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 8423779 - 8423740
Alignment:
Q  308 ccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagt 8423740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 20743358 - 20743300
Alignment:
Q  289 gacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||| |||||||| |||||||||||| | |||||| |||||||||| ||||||||||||    
T  20743358 gacatcgaacactgacacgccgacacggataataatttgagaaaatgacataattcagt 20743300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 36635311 - 36635361
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||| ||||| ||||||| |||||||||||||||||||||||    
T  36635311 acactgacacgccaacaccactaataatttgagaaaatcacataattcagt 36635361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 388
Target Start/End: Complemental strand, 44132685 - 44132627
Alignment:
Q  328 agaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 388  Q
    |||||||||| ||||||||| |||  || |||||||| |||||||||||||||||||||||    
T  44132685 agaaaatcacgtaattcagtataa--ttatatgtgtcggtgtcgtgttggtgtcgaacaca 44132627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 7012059 - 7012103
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||    
T  7012059 acacgccgacaccgataataatttgagaaaatgacataattcagt 7012103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 22234957 - 22234880
Alignment:
Q  303 acacgccgacaccgctaataaattg-agaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    |||||||||||||||||| || ||| | |||||||||||||||||| ||  ||| |||||||| ||||||||| ||||||    
T  22234957 acacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgta--attctatgtgtcggtgtcgtgtcggtgtc 22234880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 23293052 - 23293008
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  23293052 acacgccgacacagctaataatttgaaaaaatcacataattcagt 23293008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 38148785 - 38148716
Alignment:
Q  309 cgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 380  Q
    ||||||||||||||  ||||||||||||||||||||||| ||  ||||||  ||||  ||||||||||||||    
T  38148785 cgacaccgctaatagtttgagaaaatcacataattcagtgta--attttaaatgtcgatgtcgtgttggtgt 38148716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 903909 - 903959
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||| ||| ||||| |||||| |||||||||||||||||||||||    
T  903909 acactgacacaccggcaccgttaataatttgagaaaatcacataattcagt 903959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 347
Target Start/End: Complemental strand, 22440660 - 22440622
Alignment:
Q  309 cgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagt 22440622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 345
Target Start/End: Complemental strand, 23861492 - 23861455
Alignment:
Q  308 ccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  23861492 ccgacaccgctaataaattgataaaatcacatgattca 23861455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 352
Target Start/End: Complemental strand, 30522973 - 30522932
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattcagtttaac 352  Q
    ||||||||||| | ||||||||||||||||||||||| ||||    
T  30522973 acaccgctaattatttgagaaaatcacataattcagtgtaac 30522932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 347
Target Start/End: Original strand, 16189710 - 16189746
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||| || |||||||||||||||||||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagt 16189746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 17345487 - 17345451
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaa 333  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  17345487 acactgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 20521921 - 20521873
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| ||||||||| |||| |||||| |||| ||||||||||||||||    
T  20521921 acactgacacgccgataccgataataatttgataaaatcacataattca 20521873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 24343500 - 24343544
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||    
T  24343500 acacgccgacacggataataatttgagaaaattacataattcagt 24343544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 34200327 - 34200295
Alignment:
Q  313 accgctaataaattgagaaaatcacataattca 345  Q
    ||||||||||| |||||||||||||||||||||    
T  34200327 accgctaataatttgagaaaatcacataattca 34200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 380
Target Start/End: Original strand, 32308107 - 32308188
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 380  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||| |||||    
T  32308107 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta--attgtatgtgtcagtgtcgtgtcggtgt 32308188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 303 - 381
Target Start/End: Original strand, 19206043 - 19206119
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||  ||| |||||||| ||||| ||||||||||    
T  19206043 acacgccgacaccgctaataatttgagaaaatcacataattca--ttataattatatgtgtcggtgtcttgttggtgtc 19206119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 388
Target Start/End: Complemental strand, 6630984 - 6630895
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 388  Q
    ||||| ||||||||||||| ||||||| |||||||| |||| ||||||||| ||  ||| ||||||||  |||||||||||||||| |||||    
T  6630984 acactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgta--attatatgtgtcgatgtcgtgttggtgtcggacaca 6630895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 29787435 - 29787391
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacataattcagt 29787391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 381
Target Start/End: Original strand, 30731031 - 30731104
Alignment:
Q  304 cacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||    || |||||| ||||||||||||||||    
T  30731031 cacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaa----ttgtgtgtcggtgtcgtgttggtgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 11722170 - 11722121
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcag 346  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  11722170 acactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 5548673 - 5548738
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 374  Q
    |||||||||||| |||| |||||||||||| |||||||||| ||  ||| ||||||||||||||||||    
T  5548673 gccgacaccgctgataatttgagaaaatcaaataattcagtgta--attatatgtgtcagtgtcgtgt 5548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 371
Target Start/End: Original strand, 20549778 - 20549850
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    ||||| |||| |||||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgta--attatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 22868029 - 22868097
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagt 367  Q
    ||||| ||||||||||||| |||||||  |||||||||||||||||||||| ||  ||| |||||||||||    
T  22868029 acactgacacgccgacaccactaataatatgagaaaatcacataattcagtgta--attatatgtgtcagt 22868097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 23191891 - 23191933
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  23191891 acgccgacaccgctaataatttgagaaaatcacatatttcagt 23191933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 26733291 - 26733341
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||||||    
T  26733291 acactgacacgtcgacaccgctaataatttgacaaaatcacataattcagt 26733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 27945028 - 27945078
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||| ||||||| |||||||||| ||||||||||||    
T  27945028 acactgacacgccgacaccactaataatttgagaaaattacataattcagt 27945078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 298 - 374
Target Start/End: Complemental strand, 22602781 - 22602707
Alignment:
Q  298 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 374  Q
    |||| ||||||||||||||  ||| | ||||||||||||||||||||||| ||  ||| |||||||| |||||||||    
T  22602781 cactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgt 22602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 303 - 387
Target Start/End: Original strand, 24339635 - 24339717
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||| ||||||||| ||||||| ||||    
T  24339635 acacgccgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcggtgtcgtgtcggtgtcggacac 24339717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 28155563 - 28155604
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattc 344  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattc 28155604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 24289813 - 24289857
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||    
T  24289813 acacgccgacaccgccaataatttgagaaaattacataattcagt 24289857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 25481895 - 25481939
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  25481895 acacgccgacacagctaataatttgaaaaaatcacataattcagt 25481939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 10042924 - 10042970
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    ||||||||||||||||||| ||||||| |||| ||| ||||||||||    
T  10042924 acacttacacgccgacaccactaataatttgataaattcacataatt 10042970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 21828477 - 21828402
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 374  Q
    ||||| |||||||||||||| || ||| |||||||||||||||||| || | ||  ||| ||||||||||||| ||||    
T  21828477 acactgacacgccgacaccgttagtaatttgagaaaatcacataatccattgta--attgtatgtgtcagtgttgtgt 21828402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 22484012 - 22484062
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||||||||||| || |||||||  |||||||||||    
T  22484012 acactgacacgccgacaccgctaataattttagaaaattgcataattcagt 22484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 347
Target Start/End: Complemental strand, 32287523 - 32287485
Alignment:
Q  309 cgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  32287523 cgacaccgctaataatctgagaaaatcacataattcagt 32287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 25791640 - 25791685
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataat 342  Q
    ||||| ||||||||||||||||||| | |||||||| |||||||||    
T  25791640 acactgacacgccgacaccgctaattatttgagaaattcacataat 25791685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 381
Target Start/End: Complemental strand, 26329454 - 26329372
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    ||||| ||||||||||| || |||||| ||||||||| |||| |||||||| ||  ||| |||||||| | ||||||| ||||||    
T  26329454 acactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgta--attatatgtgtcggcgtcgtgtcggtgtc 26329372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 386
Target Start/End: Complemental strand, 35297723 - 35297657
Alignment:
Q  318 taataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaaca 386  Q
    |||||| |||||||||||||||||||||  |||  ||| |||||||  ||||||||||| |||||||||    
T  35297723 taataatttgagaaaatcacataattca--ttataattatatgtgttggtgtcgtgttgatgtcgaaca 35297657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 35861950 - 35861999
Alignment:
Q  296 aacacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||||| ||||||||||||  ||||||| |||| ||||||||||||||||    
T  35861950 aacactaacacgccgacacaactaataatttgaaaaaatcacataattca 35861999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 1433447 - 1433483
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacat 339  Q
    |||||||||||||| |||||| |||||||||||||||    
T  1433447 acacgccgacaccgttaataatttgagaaaatcacat 1433483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 2424619 - 2424651
Alignment:
Q  315 cgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||| |||||||||||||||||||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagt 2424651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 343
Target Start/End: Complemental strand, 2425799 - 2425759
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    |||||||| ||||| |||||| |||||||||||||||||||    
T  2425799 acacgccggcaccgttaataatttgagaaaatcacataatt 2425759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 5307253 - 5307293
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    ||||||||||||| || |||| |||||||||||||||||||    
T  5307253 acacgccgacaccacttataatttgagaaaatcacataatt 5307293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 386
Target Start/End: Complemental strand, 23128727 - 23128646
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaaca 386  Q
    |||||| ||||||  |||||| ||||||||| || |||||||||| |||  |  |||||||| |||| ||||||||||||||||    
T  23128727 acacgctgacaccaataataatttgagaaaaccatataattcagtgtaa--tcatatgtgtcggtgttgtgttggtgtcgaaca 23128646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 387
Target Start/End: Complemental strand, 10339200 - 10339109
Alignment:
Q  295 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    ||||||| ||||||||||||||| | ||| ||||||||||||||||||||||| | | ||| |||||||||||| ||||| ||||||| ||||    
T  10339200 gaacactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgtta-attatatgtgtcagtgccgtgtcggtgtcggacac 10339109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 371
Target Start/End: Original strand, 19040336 - 19040411
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||    
T  19040336 cgaatactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta--attatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 387
Target Start/End: Original strand, 26562673 - 26562764
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    |||||||  |||||||||||| ||||| || ||||||||||||||||||||||| ||  ||| ||||||||  |||||||| ||||||||||||    
T  26562673 cgaacacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgta--attatatgtgtcgatgtcgtgtcggtgtcgaacac 26562764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 7265665 - 7265593
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||    
T  7265665 acactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 374
Target Start/End: Original strand, 9027165 - 9027240
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 374  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||| || ||  ||| |||||||| |||||||||    
T  9027165 acactgacacgccgacaccgctaataatttgagataatcacataattccgtgta--attatatgtgtcggtgtcgtgt 9027240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 9658866 - 9658916
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  9658866 acactgacacgccgacaccgctaataatttaagaaaatcacataattcagt 9658916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 388
Target Start/End: Original strand, 16766684 - 16766773
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 388  Q
    ||||| |||||||||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||| ||||||||| ||||||| |||||    
T  16766684 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcggtgtcgtgtcggtgtcggacaca 16766773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 5000692 - 5000616
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    ||||| ||||||||||||||| | ||||||||||||| ||||||| ||  ||||||| |||||||||| ||| ||||||    
T  5000692 acacgtcgacaccgctaataattcgagaaaatcacatgattcagtata--attttatatgtcagtgtcatgtcggtgtc 5000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 346
Target Start/End: Complemental strand, 7801233 - 7801179
Alignment:
Q  292 accgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcag 346  Q
    |||||||||| ||||||||||||  ||||||| |||| |||||||||||||||||    
T  7801233 accgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcag 7801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 9629376 - 9629418
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  9629376 acacgccgacaccgccaataatttgagaaaatcacataattca 9629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 20371176 - 20371138
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataa 341  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  20371176 acacgccgacaccgctaataatttgagaaaatcacataa 20371138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 374
Target Start/End: Complemental strand, 9025553 - 9025491
Alignment:
Q  310 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 374  Q
    ||||| |||||||| ||||||||||||||||||||||| ||  ||| |||||||| |||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 17341735 - 17341686
Alignment:
Q  298 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||| |||||||||||||| |||||| |||| ||||||||||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagt 17341686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 388
Target Start/End: Complemental strand, 9107442 - 9107353
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 388  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| |||||||| ||  |||  | ||||| ||||||||| ||||||| |||||    
T  9107442 acactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgta--attacaagtgtcggtgtcgtgtcggtgtcggacaca 9107353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 10842525 - 10842565
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  10842525 acacgccgacaccgctaataatttgaaaaaatcacataatt 10842565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 340
Target Start/End: Complemental strand, 5732582 - 5732539
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacata 340  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||    
T  5732582 acactgacacgccgacaccgttaataatttgagaaaatcacata 5732539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 8931668 - 8931592
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    |||||||||||| ||||| || |||||||||| |||||||||||| ||  ||| ||||||||  |||||||| ||||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtata--attatatgtgtcgatgtcgtgtcggtgtc 8931592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 7377972 - 7378014
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  7377972 acaccccgacaccgctaaaaatttgagaaaatcacataattca 7378014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 7996450 - 7996400
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||| |||||||| |||||||| |||||||||||| ||||||||||    
T  7996450 acactgacatgccgacactgctaataatttgagaaaatcatataattcagt 7996400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 8022351 - 8022401
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||| |||||||| |||||||| |||||||||||| ||||||||||    
T  8022351 acactgacatgccgacactgctaataatttgagaaaatcatataattcagt 8022401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 12696311 - 12696361
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  12696311 acactgacacgccgacacagctaataatttgaaaaaattacataattcagt 12696361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 13851723 - 13851773
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||| ||||||||||||||| |||||||||| || |||||||||    
T  13851723 acactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagt 13851773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 17841661 - 17841615
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  17841661 acactgacacgccgacacagctaataatttgaaaaaatcacataatt 17841615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 19044451 - 19044501
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||  ||||||| ||||||| |||||||||||||||    
T  19044451 acactgacacgccgacacgactaataatttgagaatatcacataattcagt 19044501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 345
Target Start/End: Complemental strand, 30866202 - 30866168
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattca 345  Q
    ||||||||||||| |||||||||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattca 30866168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 346
Target Start/End: Original strand, 6665208 - 6665249
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataattcag 346  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||    
T  6665208 acgccgaaaccgctaataatttgagtaaatcacataattcag 6665249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 10294104 - 10294182
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    ||||| ||||||||||| |||||| |||| |||| |||| | |||  || |||||||| ||||||||||||||||| ||||    
T  10294104 gccgataccgctaataatttgagataatcgcatatttcaatgtaa--ttatatgtgtcggtgtcgtgttggtgtcggacac 10294182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 13360447 - 13360394
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||  ||||| ||||||| ||| ||| |||||||||||||||||||||||    
T  13360447 cgaacacagacacgtcgacaccactagtaatttgagaaaatcacataattcagt 13360394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 31959143 - 31959196
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||| |||||||| ||| |||||||| |||| ||||||||||||| ||||    
T  31959143 cgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagt 31959196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 32511725 - 32511688
Alignment:
Q  310 gacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||| || ||||||||||||||||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagt 32511688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 381
Target Start/End: Complemental strand, 34073419 - 34073337
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    ||||| ||| ||| ||| ||||||||| ||||||||||| ||||||||||| ||  ||| |||| ||| ||||||||| ||||||    
T  34073419 acactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgta--attatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 7977896 - 7977852
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  7977896 acacgccgacacagctaataatttgaaaaaattacataattcagt 7977852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 347
Target Start/End: Complemental strand, 31579283 - 31579247
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||| |||||| |||||||||||||||||||||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagt 31579247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 343
Target Start/End: Complemental strand, 33001355 - 33001315
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataatt 33001315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 34595127 - 34595171
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  34595127 acacgccgacacaactaataatttgaaaaaatcacataattcagt 34595171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 24362268 - 24362192
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| ||  ||| ||||||||| |||||||| ||||||    
T  24362268 acacgccgacaccgctaataatttgagagaatcacataattcagtgta--attatatgtgtcaatgtcgtgtcggtgtc 24362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Complemental strand, 11927150 - 11927076
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    |||||||||| | |||||| |||| |||||||||||||||||| ||  ||| |||||||| ||||||||||||||||    
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgta--attatatgtgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 34897078 - 34897122
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  34897078 acacgtcgacaccgctaataatttgagaaaatcacataattcagt 34897122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 343
Target Start/End: Complemental strand, 39954345 - 39954305
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  39954345 acacgccgacaccgctaataatttgagaaaatcacataatt 39954305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 15816201 - 15816113
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    ||||| ||||||||||||  ||||||| |||| |||||||||||||| ||| ||  ||| || ||||| ||||||||||||||||| ||||    
T  15816201 acactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgta--attataagtgtcggtgtcgtgttggtgtcggacac 15816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 31109590 - 31109518
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    ||||| |||||||||||||| |||||| |||||||||||| | |||||||| ||||  | |||||||||||||||    
T  31109590 acactgacacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaac--tatatgtgtcagtgtcg 31109518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 31236643 - 31236601
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattca 31236601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 303 - 371
Target Start/End: Complemental strand, 13844662 - 13844596
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||| ||  ||| |||||||| ||||||    
T  13844662 acacgccgacactgctaataatttgagaaaatcacataattgagtgta--attatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 18067993 - 18067956
Alignment:
Q  310 gacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||| |||||||||||||||||||||||    
T  18067993 gacaccgctaataatttgagaaaatcacataattcagt 18067956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 13437036 - 13436988
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  13437036 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 22651963 - 22652011
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  22651963 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 22652011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 27101508 - 27101548
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  27101508 acacgccgacaccgctaataatttgaaaaaatcacataatt 27101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 30271381 - 30271313
Alignment:
Q  279 atgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||  ||||||| ||||| |||||||||||| |||||| | |||| ||||||||||||| ||||    
T  30271381 atgaagcacagacaccggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagt 30271313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 4611532 - 4611571
Alignment:
Q  308 ccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagt 4611571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 4786410 - 4786338
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    ||||| |||||||||||||  |||||| || |||||||||||||||||||| ||  ||| |||||||| ||||||    
T  4786410 acactgacacgccgacaccattaataatttaagaaaatcacataattcagtgta--attatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 381
Target Start/End: Original strand, 11944658 - 11944734
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    |||||||||||| | |||||| |||| |||||||||||| ||||| ||  ||| |||||||| ||||||||||| ||||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgta--attatatgtgtcggtgtcgtgttgatgtc 11944734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 7658458 - 7658500
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||    
T  7658458 acgccgacaccactaataatttgagaaaattacataattcagt 7658500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 27213540 - 27213582
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||||||||||| |||||||| || ||||||||||||||||||    
T  27213540 acacgccgacactgctaataatttcagaaaatcacataattca 27213582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 29510376 - 29510326
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| ||||||||    
T  29510376 acactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagt 29510326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 371
Target Start/End: Original strand, 3025557 - 3025610
Alignment:
Q  316 gctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    |||||||| ||||||||||||||||||||||| ||  ||| || ||||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgta--attataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 25566841 - 25566910
Alignment:
Q  310 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    ||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||| ||||||||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcggtgtcgtgttggtgtc 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 36934657 - 36934705
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| ||||| ||||||||||||||| | || ||||||||||||||||    
T  36934657 acactaacacgtcgacaccgctaataattcgaaaaaatcacataattca 36934705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 8e-16; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 387
Target Start/End: Original strand, 25361881 - 25361961
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    ||||||||||| || |||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||| ||||||| ||||    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgta--attatatgtgtcagtgtcgtgtcggtgtcggacac 25361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 2896193 - 2896143
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  2896193 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagt 2896143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 36878448 - 36878498
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  36878448 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagt 36878498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 382
Target Start/End: Original strand, 34371714 - 34371783
Alignment:
Q  310 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 382  Q
    |||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| |||||||||||||||||    
T  34371714 gacaccgctaataa-ttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgttggtgtcg 34371783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 9828037 - 9828106
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 374  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||| ||  |||||||||||| |||||||||    
T  9828037 acacgccgacaccactaataatttgataaaatcacataattcagtgta--attttatgtgtcggtgtcgtgt 9828106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 10475043 - 10474999
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  10475043 acacgccgacaccgctaataacttgagaaaatcacataattcagt 10474999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 10572663 - 10572579
Alignment:
Q  295 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||||||| || ||  |||  ||||||| |||| |||||||||||    
T  10572663 gaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgta--attaaatgtgtcggtgttgtgttggtgtc 10572579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 398837 - 398787
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  398837 acactgacacgccgacaccgctaataatttgaaaaaatcacataattcagt 398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 17831603 - 17831553
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||||    
T  17831603 acactgacacgccgacaccgctaataatttgagaaaatcacattattcagt 17831553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 6427337 - 6427385
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  6427337 acactgacacgccaacaccgctaataatttgagaaaatcacataattca 6427385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 7918277 - 7918208
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 374  Q
    |||||| |||| | ||||||| ||||||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  7918277 acacgctgacatcactaataatttgagaaaatcacataattcagtgta--attatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 12443526 - 12443482
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  12443526 acacgccgacacagctaataatttgagaaaatcacataattcagt 12443482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 1262868 - 1262919
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||||||  |||||||||||| |||||||| |||||||||||||||||||||    
T  1262868 cgaacacggacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 5376572 - 5376522
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||||||||||| || ||||||| ||||||||||||    
T  5376572 acactaacacgccgacaccgctaataatttaagaaaataacataattcagt 5376522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 6415073 - 6415019
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 351  Q
    ||||| ||||||||||| ||||||| | |||||||||||||||||| ||||||||    
T  6415073 acactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaa 6415019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 380
Target Start/End: Original strand, 17754304 - 17754379
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 380  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| ||||  | ||||||||||||| |||| |||||    
T  17754304 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaac--tatatgtgtcagtgtggtgtcggtgt 17754379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 387
Target Start/End: Original strand, 44482234 - 44482305
Alignment:
Q  314 ccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    ||||| |||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||||| ||||||| ||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgtcggtgtcggacac 44482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 609531 - 609482
Alignment:
Q  296 aacacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||||| ||||||||||||| ||||||| |||||||||| ||||||||||    
T  609531 aacactgacacgccgacaccactaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 19562696 - 19562643
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||| |||||||||||| |||||||| ||||||||||| |||| ||||||    
T  19562696 cgaacactgacacgccgacactgctaataatttgagaaaatctcatagttcagt 19562643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 113292 - 113336
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  113292 acacgccgacacagctaataatttgaaaaaatcacataattcagt 113336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 347
Target Start/End: Original strand, 10233254 - 10233290
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10233254 acaccactaataaattgagaaaatcacataattcagt 10233290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 25098617 - 25098577
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  25098617 gccgacaccgctgataatttgagaaaatcacataattcagt 25098577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 34298429 - 34298473
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||    
T  34298429 acacaccgacaccactaataatttgagaaaatcacataattcagt 34298473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 9709807 - 9709854
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 344  Q
    ||||| ||| ||| ||||||||||||| ||||||||||||||||||||    
T  9709807 acactgacatgcctacaccgctaataatttgagaaaatcacataattc 9709854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 26238173 - 26238134
Alignment:
Q  308 ccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  26238173 ccgacaccgctaataatttgagaaaataacataattcagt 26238134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 27471639 - 27471588
Alignment:
Q  296 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||| |||| |||| ||||||||||| ||||||||| |||||||||||||    
T  27471639 aacactgacacaccgataccgctaataatttgagaaaagcacataattcagt 27471588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 345
Target Start/End: Complemental strand, 38078736 - 38078685
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||||||| ||||| |||||| |||||||| |||| ||||||||||||||||    
T  38078736 cgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattca 38078685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 371
Target Start/End: Complemental strand, 39953210 - 39953146
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    ||||||||||||||||||| || |||||||||||||||| ||| ||  ||| |||||||| ||||||    
T  39953210 acgccgacaccgctaataattttagaaaatcacataatttagtgta--attgtatgtgtcggtgtcg 39953146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 5898330 - 5898288
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||||||||  ||| ||||||||||||||||||    
T  5898330 acgccgacaccgctaataatctgaaaaaatcacataattcagt 5898288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 9103627 - 9103681
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 351  Q
    ||||| |||||||||||| | |||||| |||| |||||||||||||| |||||||    
T  9103627 acactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaa 9103681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 347
Target Start/End: Complemental strand, 20157410 - 20157372
Alignment:
Q  309 cgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  20157410 cgacaccgctaataatgtgagaaaatcacataattcagt 20157372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 38503307 - 38503357
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||| |||||||||||||||| |||||||||||| ||| ||||||    
T  38503307 acactaacacaccgacaccgctaataatttgagaaaatcatatatttcagt 38503357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 40285726 - 40285676
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||| || ||||||||||||| ||||||||||| |||||||||||    
T  40285726 acactgacacaccaacaccgctaataatttgagaaaatcgcataattcagt 40285676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 41877534 - 41877496
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaattacataatt 41877496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 9690344 - 9690303
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcaca 338  Q
    ||||| |||||| ||||||||||||||| |||||||||||||    
T  9690344 acactgacacgctgacaccgctaataaactgagaaaatcaca 9690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 371
Target Start/End: Complemental strand, 29163447 - 29163381
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    |||||||||||||||||| || ||  ||||||||||||||||| ||||  ||| |||||||| ||||||    
T  29163447 acacgccgacaccgctaaaaatttaggaaaatcacataattcaattta--attatatgtgtcggtgtcg 29163381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 31015039 - 31015080
Alignment:
Q  306 cgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||| |||| |||||||| |||||||||||||||||||||||    
T  31015039 cgcctacacagctaataatttgagaaaatcacataattcagt 31015080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 36905984 - 36906033
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcag 346  Q
    ||||| |||| || |||||||||||||  |||||||||||||||||||||    
T  36905984 acactgacacaccaacaccgctaataatctgagaaaatcacataattcag 36906033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Original strand, 40181871 - 40181908
Alignment:
Q  310 gacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagt 40181908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 1486775 - 1486731
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||    
T  1486775 acacgctgacacagctaataatttgaaaaaatcacataattcagt 1486731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 13436451 - 13436495
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| |||||||| || || |||||||||||||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagt 13436495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 347
Target Start/End: Original strand, 19909298 - 19909334
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  19909298 acaccgctaataatttgagaaaatcacataactcagt 19909334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 21378571 - 21378615
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||| ||||||| ||||||||||||| ||||| ||||||||||||    
T  21378571 acacaccgacacagctaataaattgaaaaaattacataattcagt 21378615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 21530682 - 21530722
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    |||||||||||||| |||||| |||||||||||| ||||||    
T  21530682 acacgccgacaccgttaataatttgagaaaatcatataatt 21530722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 34712449 - 34712380
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 374  Q
    |||| ||| ||| |||||||| |||||||||| |||||||| ||| |||  || ||||||||||||||||||    
T  34712449 acacaccgtcactgctaataatttgagaaaataacataatttagtgtaa--ttatatgtgtcagtgtcgtgt 34712380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 3966481 - 3966579
Alignment:
Q  288 ggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    |||||| | ||||| ||| ||||||||||||||||| |||||||||||||| |||||||| ||  ||| |||||||| |||||||||  |||||| ||||    
T  3966481 ggacactggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgta--attatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 30098295 - 30098361
Alignment:
Q  279 atgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||||||| |||||||| ||||| ||||| ||| |||| |||||| |||||||||||||||||||||    
T  30098295 atgaagcacggacaccggacactgacacgacgaaaccgttaataatttgagaaaatcacataattca 30098361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 19737582 - 19737506
Alignment:
Q  269 gtttcaatcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||||||||  ||||||||||||| || ||||| |||||| || |||| |||||| |||||||||| ||||||||||    
T  19737582 gtttcaatctctgaagcaaggacaacggacactgacacgctgaaaccgataataatttgagaaaattacataattca 19737506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 28588740 - 28588696
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  28588740 acacgccgacaccggtaataatttgagaaaatcacataattcagt 28588696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 27932229 - 27932272
Alignment:
Q  304 cacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaattacataattcagt 27932272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 39698528 - 39698616
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    ||||| |||||| ||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||||||||||||| ||||||| ||||    
T  39698528 acactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtgtcggacac 39698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 27144450 - 27144496
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  27144450 acactgacacgccgacaccgctaataatttgaggaaatcacataatt 27144496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 17123035 - 17123080
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataat 342  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  17123035 acactgacacgccaacaccgctaataatttgagaaaatcacataat 17123080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 31084310 - 31084358
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  31084310 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 31084358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 2436909 - 2436956
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 344  Q
    ||||| ||||||||||||||||||||| |||  |||||||||||||||    
T  2436909 acactgacacgccgacaccgctaataatttgcaaaaatcacataattc 2436956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 415
Target Start/End: Original strand, 6035470 - 6035585
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacacatggggaca 396  Q
    ||||| ||||||||||||||||||||| ||||| |||| | |||||||||| ||  ||| ||| |||| ||||||||| |||| |  ||||   ||||||    
T  6035470 acactgacacgccgacaccgctaataatttgag-aaataatataattcagtgta--attatatttgtcggtgtcgtgtcggtgacagacacgccgggaca 6035566  T
Q  397 cgcttaatctaaggagtgt 415  Q
    ||| |||||| ||||||||    
T  6035567 cgcctaatctgaggagtgt 6035585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 6247609 - 6247659
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagt 6247659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 6326369 - 6326319
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||| ||||| ||| |||||||||| ||||||||||||    
T  6326369 acactgacacgccgacatcgctagtaatttgagaaaattacataattcagt 6326319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 14674256 - 14674302
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  14674256 acactgacacgccgacacagctaataatttgaaaaaatcacataatt 14674302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 19579696 - 19579734
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  19579696 acgccgacacagctaataatttgagaaaatcacataatt 19579734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 21191128 - 21191078
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||| |||||||| |||||||| |||| ||||||||||||||||||    
T  21191128 acactgacatgccgacacagctaataatttgaaaaaatcacataattcagt 21191078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 6471948 - 6471911
Alignment:
Q  310 gacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagt 6471911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 9449463 - 9449504
Alignment:
Q  304 cacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||||||||||  |||||| |||||||||||||||||||||    
T  9449463 cacgccgacaccaataataatttgagaaaatcacataattca 9449504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 21576820 - 21576767
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||| | ||||| |||| |||||||| |||| ||||||||||||||||||    
T  21576820 cgaacactgatacgccaacacagctaataatttgaaaaaatcacataattcagt 21576767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 344
Target Start/End: Original strand, 26716141 - 26716178
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattc 344  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26716141 gccgacactgctaataatttgagaaaatcacataattc 26716178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 344
Target Start/End: Original strand, 26985881 - 26985918
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattc 344  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26985881 gccgacactgctaataatttgagaaaatcacataattc 26985918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 30502446 - 30502388
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    ||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 30542789 - 30542731
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    ||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 32767004 - 32766930
Alignment:
Q  308 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaa 384  Q
    |||||||||||||||| ||||||||||| || |||||| | ||  ||| |||||||  ||||||||| |||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgcacaattcaatgta--attatatgtgtttgtgtcgtgtcggtgtcgaa 32766930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 36838544 - 36838606
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgtt 375  Q
    ||||||||||||| |||||||||| |||||||| ||| ||  ||| |||||||| ||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgta--attatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 4344727 - 4344779
Alignment:
Q  295 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||| |||||| ||||||| |||||| |||| ||||| ||||||||||||    
T  4344727 gaacactaacacgctgacaccgataataatttgaaaaaatgacataattcagt 4344779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 11685926 - 11685999
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgt 372  Q
    ||||| ||| ||||||||||||||||| |||||||| || ||||||| ||| ||  ||| |||||||| |||||||    
T  11685926 acactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgta--attatatgtgtcggtgtcgt 11685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 34879343 - 34879387
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||| ||||||||| || |||||||||||| ||||||||||    
T  34879343 acacgccggcaccgctaaaaatttgagaaaatcatataattcagt 34879387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 35017030 - 35017070
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    ||||||||| ||| ||||||| |||||||||||||||||||    
T  35017030 acacgccgaaaccactaataatttgagaaaatcacataatt 35017070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 38816761 - 38816729
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatc 335  Q
    ||||||||||||||||||||| |||||||||||    
T  38816761 acacgccgacaccgctaataatttgagaaaatc 38816729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 21616755 - 21616799
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  21616755 acacgccgacaccgctaataatttgagaaaatcacataattcagt 21616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 21782891 - 21782840
Alignment:
Q  296 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  21782891 aacactgacacgccgacactgctaataatttgagaaaatcacataattcagt 21782840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 380
Target Start/End: Original strand, 44860320 - 44860388
Alignment:
Q  310 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 380  Q
    |||||||||||||| ||||||||||| ||||||||||| ||  ||| |||||||| |||||||||||||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgta--attatatgtgtcggtgtcgtgttggtgt 44860388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 31284035 - 31284080
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataat 342  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  31284035 acacttacacgccgacactgctaataatttgagaaaatcacataat 31284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 37411306 - 37411266
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  37411306 gccgacaccgctaataatttgagaaaatcacataattcagt 37411266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 309 - 387
Target Start/End: Complemental strand, 18889651 - 18889575
Alignment:
Q  309 cgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    |||| |||||||||||||||||||||||||||||||||| ||  ||  |||||||| ||||| |||| |||||| ||||    
T  18889651 cgacgccgctaataaattgagaaaatcacataattcagtgta--atcatatgtgtcggtgtcttgtttgtgtcggacac 18889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 23718013 - 23718063
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  23718013 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagt 23718063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 24105685 - 24105735
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  24105685 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagt 24105735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 28677904 - 28677946
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  28677904 acgccgacaccgctaataatttgaaaaaatcacataattcagt 28677946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 24894357 - 24894426
Alignment:
Q  279 atgaagcaaggacac-cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||| |||||| || ||||| |||||||||||| |||||||| || | ||||||||||||||||||    
T  24894357 atgaagcacggacacacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagt 24894426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 31808064 - 31808134
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgt 369  Q
    ||||| |||| |||||||||||||||| || | |||||||||||||||||| ||  ||| |||||||||||||    
T  31808064 acactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgta--attatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 18276518 - 18276558
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  18276518 gccgacaccgctaataatttgagaaaatcacttaattcagt 18276558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 10535823 - 10535781
Alignment:
Q  305 acgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| |||||| |||||||||| ||||||||||||    
T  10535823 acgccgacaccgataataatttgagaaaatgacataattcagt 10535781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 18420500 - 18420458
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||||| |||| |||||||| |||||||||||||||||||||    
T  18420500 acacgccaacactgctaataatttgagaaaatcacataattca 18420458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 21374771 - 21374721
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  21374771 acactaacacgccgacacagctaataatttgaaaaaattacataattcagt 21374721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 30404922 - 30404872
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||||||||||| | |||||| |||| ||||||||||||||||||    
T  30404922 acactgacacgccgacacggttaataatttgaaaaaatcacataattcagt 30404872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 36409689 - 36409619
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    |||||||||||| |||| |||| |||||||||||||| ||| |||    ||||||||| ||||| ||||||||||    
T  36409689 gccgacaccgctgataatttgaaaaaatcacataatttagtgtaa----ttatgtgtcggtgtcatgttggtgtc 36409619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 896198 - 896246
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| |||||||||||| |||||||  |||||||||||||||| ||||    
T  896198 acactgacacgccgacactgctaatagtttgagaaaatcacatatttca 896246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 19573971 - 19574015
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||||| |||||| || ||||||| ||||||||||||    
T  19573971 acacgccgacaccgataataatttaagaaaataacataattcagt 19574015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 35447960 - 35447904
Alignment:
Q  296 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaac 352  Q
    ||||||||||||| |||| ||||||||| |  ||||||| |||||||||||| ||||    
T  35447960 aacacttacacgctgacatcgctaataattaaagaaaattacataattcagtataac 35447904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 388
Target Start/End: Complemental strand, 36756416 - 36756327
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 388  Q
    ||||| ||||| ||||||  ||||||| ||||  |||| |||||||||||| |||  || || ||||| |||||||||| ||||||||||||    
T  36756416 acactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaa--ttataagtgtcggtgtcgtgttagtgtcgaacaca 36756327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 37558964 - 37559012
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| |||||||||||| |||||||| |||  ||||||||||||||||    
T  37558964 acactgacacgccgacacagctaataatttgtaaaaatcacataattca 37559012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 42832342 - 42832298
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||| |||||||||||||||| |||||||||| ||||| ||||||    
T  42832342 acacaccgacaccgctaataatttgagaaaattacatatttcagt 42832298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 92794 - 92844
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  92794 acactgacacgccgacaccgctaataatttgagaaaattacataattcagt 92844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 4987365 - 4987313
Alignment:
Q  295 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||| |||||||||||| |||||||| |||| ||||||||||||||||||    
T  4987365 gaacactgacacgccgacacagctaataatttgaaaaaatcacataattcagt 4987313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 8039901 - 8039824
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 382  Q
    ||||||| ||||||||||||| |||||||||| | |||||||||| ||  ||| |||||||| ||||||||| |||||||    
T  8039901 acacgccaacaccgctaataatttgagaaaattatataattcagtgta--attatatgtgtcggtgtcgtgtcggtgtcg 8039824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 8383250 - 8383294
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  8383250 acacgccgacaccgctaataatttgagaaaatcatataattcagt 8383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 26290358 - 26290431
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgt 372  Q
    ||||| |||||||||||||  |||||| |||||||||||||||| ||| |||||  ||| ||||||||||||||||    
T  26290358 acactgacacgccgacaccattaataatttgagaaaatcacatagttcggttta--attatatgtgtcagtgtcgt 26290431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 8413038 - 8412963
Alignment:
Q  276 tcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 351  Q
    ||||||||||| |||||||| ||| | |||  |||||||  ||||||| ||||||||| |||||||||||||||||    
T  8413038 tcaatgaagcacggacaccggacattgacagaccgacacaactaataatttgagaaaaacacataattcagtttaa 8412963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 5407313 - 5407271
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  5407313 acacgccgacaccgctaaaaatttgagaaaatcacataattca 5407271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 10690333 - 10690284
Alignment:
Q  298 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||| | ||||||||||||||  ||||||||||||||||||||||    
T  10690333 cacttacactcggacaccgctaataatctgagaaaatcacataattcagt 10690284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 10954936 - 10954989
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||| ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  10954936 cgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagt 10954989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 303 - 371
Target Start/End: Complemental strand, 49505220 - 49505154
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    |||||| || ||||||||||| ||||||||||||||||||| ||| ||  ||| |||||||||||||||    
T  49505220 acacgcagagaccgctaataatttgagaaaatcacataatttagtgta--attatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 5441103 - 5441055
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| |||||||| ||||||||| || |||||||||||||||||||||    
T  5441103 acactgacacgccgtcaccgctaaaaatttgagaaaatcacataattca 5441055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 7928448 - 7928509
Alignment:
Q  308 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 371  Q
    |||||||||||||||| |||| |||||||||||||||||| ||  ||| |||||||| ||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgta--attatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 12704000 - 12704044
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||    
T  12704000 acacgccgacaccactaataatttgagaaaagcacataattcagt 12704044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 34307846 - 34307802
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcacatatttcagt 34307802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 40052319 - 40052367
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  40052319 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 2620125 - 2620070
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaac 352  Q
    ||||| ||||||||||||| ||||| | ||||||||||||||||||| ||| ||||    
T  2620125 acactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaac 2620070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 9800027 - 9800074
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 344  Q
    ||||| ||||||||||||| ||||||| |||||||||| |||||||||    
T  9800027 acactgacacgccgacacctctaataatttgagaaaattacataattc 9800074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 11313861 - 11313797
Alignment:
Q  308 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 374  Q
    ||||||| |||||||| ||||||||||||||||||| ||| ||  ||| ||||||| ||||||||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgta--attatatgtgttagtgtcgtgt 11313797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 14979175 - 14979218
Alignment:
Q  304 cacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||    
T  14979175 cacgccgacacagctaataatttgaaaaaatcacataattcagt 14979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 387
Target Start/End: Original strand, 25064902 - 25064982
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    ||||||||||||||||||| | |||| |||||||||||||| ||| |||    ||||||||  || |||||||||||||| ||||    
T  25064902 acacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaa----ttatgtgttggtatcgtgttggtgtcggacac 25064982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 1438791 - 1438841
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||| |||||| |||||| || |||||||||||||||||||||||    
T  1438791 acactgacacaccgacatcgctaacaatttgagaaaatcacataattcagt 1438841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 21479105 - 21479155
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| ||||||||    
T  21479105 acactgacacgccgacacagctaataatttgaaaaaatcacacaattcagt 21479155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 21720751 - 21720801
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||||||||||||| |||||| ||||||| ||| |||||||||||    
T  21720751 acactgacacgccgacaccgataataatttgagaatatctcataattcagt 21720801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 387
Target Start/End: Original strand, 14209106 - 14209188
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    ||||||||||||  ||||||| || | |||||||||||||||||| ||  |||  | ||||||||||||||| ||||||| ||||    
T  14209106 acacgccgacacaactaataattttaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtgtcggacac 14209188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 344
Target Start/End: Original strand, 24633763 - 24633800
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattc 344  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  24633763 gccgacaccactaataatttgagaaaatcacataattc 24633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 381
Target Start/End: Original strand, 28678290 - 28678372
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    ||||| ||| |||||| | |||||||| || | |||||||||||||| ||| |||  || |||||||| ||||||||||||||||    
T  28678290 acactgacatgccgacgctgctaataatttaataaaatcacataatttagtataa--ttgtatgtgtcggtgtcgtgttggtgtc 28678372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 32429455 - 32429402
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||| | |||| |||||| ||||||||| || ||||||||||||||||||||    
T  32429455 cgaacattgacactccgacaacgctaataatttaagaaaatcacataattcagt 32429402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 4991033 - 4990989
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||| |||||||||||||||  |||||||||| ||||||||||||    
T  4991033 acactccgacaccgctaatagtttgagaaaattacataattcagt 4990989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 11493427 - 11493383
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||| |||||||  ||||||||||||||||||||||    
T  11493427 acacgtcgacaccactaataatgtgagaaaatcacataattcagt 11493383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 11610514 - 11610558
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||| ||||||||||||| || | ||||||||||||||||||    
T  11610514 acacgccaacaccgctaataatttaaaaaaatcacataattcagt 11610558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 11665931 - 11666008
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttg 376  Q
    ||||| |||| |||||| ||||||||| |||| ||||||||| |||| ||| |||  || |||||||| |||||||||||    
T  11665931 acactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaa--ttatatgtgtcggtgtcgtgttg 11666008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 14829677 - 14829724
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  14829677 acactgacacgccgacacagctaataatttga-aaaatcacataattca 14829724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 16192816 - 16192772
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||| ||||||||| |||||| |||||||||| ||||||||||||    
T  16192816 acacaccgacaccgttaataatttgagaaaataacataattcagt 16192772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 23870625 - 23870581
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  23870625 acacgtcgacaccgctaataatttgaaaaaatcatataattcagt 23870581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 25074782 - 25074822
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    |||||||||||||| |||||| |||||||||| ||||||||    
T  25074782 acacgccgacaccgataataatttgagaaaatgacataatt 25074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 26508103 - 26508147
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||    
T  26508103 acacgctgacacagctaataatttgaaaaaatcacataattcagt 26508147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 28917994 - 28918038
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||  |||||||| |||| ||||||||||||||||||    
T  28917994 acacgccgacatagctaataatttgaaaaaatcacataattcagt 28918038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 32804602 - 32804566
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataatt 343  Q
    |||||||||| |||||| |||||||||||||||||||    
T  32804602 gccgacaccgttaataatttgagaaaatcacataatt 32804566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 34910310 - 34910354
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  34910310 acacgccgacacaactaataatttgaaaaaatcacataattcagt 34910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 9809 - 9737
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    |||||| || ||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||||||||||||    
T  9809 gccgacgccactaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcgtgttggtgtc 9737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 380
Target Start/End: Original strand, 1028 - 1103
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 380  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| ||||  | ||||||||||||| |||| |||||    
T  1028 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaac--tatatgtgtcagtgtggtgtcggtgt 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 13387 - 13437
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||||||    
T  13387 acactgacacgccgacacaactaataatttgagaaaatcacataattcagt 13437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 347
Target Start/End: Complemental strand, 21940 - 21890
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||||||    
T  21940 acactgacacgccgacacaactaataatttgagaaaatcacataattcagt 21890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 51798 - 51848
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||||    
T  51798 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagt 51848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 20165 - 20239
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtg 379  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||||||||||||| ||||    
T  20165 acacgccgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtg 20239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 53173 - 53217
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||    
T  53173 acacgccgataccgccaataatttgagaaaatcacataattcagt 53217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 135378 - 135309
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 374  Q
    |||| ||||||| |||||||| |||||||||||||||||||| || ||  ||| |||||||| |||||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgta--attatatgtgtcggtgtcgtgt 135309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 380
Target Start/End: Complemental strand, 44584 - 44516
Alignment:
Q  310 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 380  Q
    ||||||||||| || ||||||||||||||||||||||| ||  ||| |||||||| || |||||| |||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgta--attatatgtgtcggtatcgtgtcggtgt 44516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 28834 - 28885
Alignment:
Q  294 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    |||||||| |||||||||||||| |||||| || |||||||| |||||||||    
T  28834 cgaacactaacacgccgacaccgttaataatttaagaaaatcgcataattca 28885  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 192321 - 192274
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 344  Q
    ||||| |||||||||||||| |||||| |||||||||| |||||||||    
T  192321 acactgacacgccgacaccgttaataatttgagaaaattacataattc 192274  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 263430 - 263362
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 381  Q
    |||| |||||||| ||||||||| ||||||||||||| ||  ||| || ||||||||||||||| ||||||    
T  263430 acactgctaataatttgagaaaaccacataattcagtgta--attataagtgtcagtgtcgtgtcggtgtc 263362  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 241581 - 241669
Alignment:
Q  297 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    ||||| |||||||||||| |||||||| |||  |||||||||||||| ||| ||  ||| |  ||||| ||||||||||||||||| ||||    
T  241581 acactgacacgccgacacagctaataatttggaaaaatcacataatttagtgta--attatgagtgtcggtgtcgtgttggtgtcggacac 241669  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 26386 - 26428
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattca 345  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||    
T  26386 acacgtcgacaccactaataatttgagaaaatcacataattca 26428  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 387
Target Start/End: Complemental strand, 3911 - 3833
Alignment:
Q  307 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 387  Q
    |||||||| | |||||| || | |||||||||||||||||| |||  ||  | ||||||||||||||||||||||| ||||    
T  3911 gccgacacggttaataatttaaaaaaatcacataattcagtgtaa--ttacaagtgtcagtgtcgtgttggtgtcggacac 3833  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 388
Target Start/End: Complemental strand, 68299 - 68225
Alignment:
Q  312 caccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 388  Q
    ||||| |||||| |||||||||||| |||||| ||| |||  || || ||||||||||||| | |||||||||||||    
T  68299 caccgttaataatttgagaaaatcatataatttagtataa--ttataggtgtcagtgtcgtatcggtgtcgaacaca 68225  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 1637 - 1677
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataatt 343  Q
    |||||||||||||| |||||| |||||||||||| ||||||    
T  1637 acacgccgacaccgttaataatttgagaaaatcatataatt 1677  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 14523 - 14567
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  14523 acacgccgacacaactaataatttgaaaaaatcacataattcagt 14567  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 33429 - 33385
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  33429 acacgccgacacagctaataatttgaaaaaataacataattcagt 33385  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 347
Target Start/End: Original strand, 63774 - 63810
Alignment:
Q  311 acaccgctaataaattgagaaaatcacataattcagt 347  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  63774 acaccgctaataatttgagaaaattacataattcagt 63810  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 46675 - 46719
Alignment:
Q  303 acacgccgacaccgctaataaattgagaaaatcacataattcagt 347  Q
    |||||||||||| | |||||| |||| ||||||||||||||||||    
T  46675 acacgccgacacagttaataatttgaaaaaatcacataattcagt 46719  T

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