View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10858_low_38 (Length: 213)
Name: NF10858_low_38
Description: NF10858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10858_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 32288359 - 32288164
Alignment:
| Q |
1 |
tgttcattccagcattgccacctgcagcaccaccgccgccgccgcccatatttgcttcttgtccaccctgtcctccaccagcatttgcatcgccaaatcc |
100 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
32288359 |
tgttcattccagtattgccacctgcagcaccaccgccgccgccacccatatttgcttcttgtccactctgtcctccaccagcatttgcatcgccaaatcc |
32288260 |
T |
|
| Q |
101 |
aggagcagcagtgccatatacagcagtgtattcataccttgaggtggtggtgccatcaggtgttactccggtggcctcataagcgtatgcggtcac |
196 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32288259 |
aggagcagcagtgccatatacagcagtgtattcataccttgaggtggtggtgccatcaggtgttactccggtggcctcataagcgtatgcggtcac |
32288164 |
T |
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