View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10859_high_13 (Length: 218)
Name: NF10859_high_13
Description: NF10859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10859_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 35457254 - 35457080
Alignment:
| Q |
1 |
actttgctaggcaagacaaatcttccagagcttataaacagatagcttataacttataaactcatacaatcaaaatgaacctgtttggtaataactttta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35457254 |
actttgctaggcaagacaaatcttccagagcttatag-cggatagcttataacttataaactcatacaatcaaaatgaacctgtttggtaataactttta |
35457156 |
T |
|
| Q |
101 |
caagctacttcaagtaaatatcatctatcgggtagttcgctatattaataaacactacaaactcaatttgctagct |
176 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
35457155 |
caagctacttcaagtaaatatcatctatcgggtagttcgctattttaataaacactacaaactcaatttgctagct |
35457080 |
T |
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