View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10860_low_15 (Length: 278)
Name: NF10860_low_15
Description: NF10860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10860_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 46266789 - 46266945
Alignment:
| Q |
1 |
cggagcggaaatcaaaacggcaatcaatacctgcatcaacgtgttcatcaaaacgacaatgcagttcaatgcatgattgacatcaataaaaacatatacg |
100 |
Q |
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| T |
46266789 |
cggagcggaaatcaaaaccgcaatcaatacctgcatcaacatgttcatcaaaacgacaatgcagttcaatgcatgattgacatcaataaaaacatatacg |
46266888 |
T |
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| Q |
101 |
taaatgggaaaaacataatcattcttatatgaatatgaatagtggtatatacctggt |
157 |
Q |
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| T |
46266889 |
taaatgggaaaaacataatcattcttatatgaatatgaatagtggtatatacctggt |
46266945 |
T |
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