View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10860_low_24 (Length: 204)
Name: NF10860_low_24
Description: NF10860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10860_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 5938959 - 5938787
Alignment:
| Q |
13 |
aagaagaaagagggaatgacaagagatgtggggactcaaagcacacctccttatcttagttcaagcagtcctagccctacttcaactccatccatcatag |
112 |
Q |
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| T |
5938959 |
aagaagaaagagggaatgacaagagatgtggggactcaaagcacacctccttatcttagttcaagcagtcctagccctacttcaactccatccatcatag |
5938860 |
T |
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| Q |
113 |
agaggttaaaaactagagctgtagactcacctagttcaaattcaaatgcaaaagcaaaatctgaggaagaggt |
185 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
5938859 |
agaggttaaaaactagagctgtagactcacctagttcaaattcaaatgcaaaaacaaaatctgaggaagaggt |
5938787 |
T |
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