View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10861_low_28 (Length: 236)
Name: NF10861_low_28
Description: NF10861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10861_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 22362858 - 22363067
Alignment:
| Q |
18 |
aacataaagtggataatatgtaagtgaaacatgtgaaattatagatgcatatatgtacctgaaaagtatcacctaaacttgtagaggggtcaaaactgca |
117 |
Q |
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| T |
22362858 |
aacataaagtggataatatgtgagtgaaacatgtgaaattatagaagcatatatgtacctgaaaagtatcacctaaacttgtagaggggtcaaaactgca |
22362957 |
T |
|
| Q |
118 |
tatgacatgaagtctctgaccttcacctatattcactaaataaaatacagtacctgctggaattacatacaaatcccccgtctttattctcctttcctct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
22362958 |
tatgacatgaagtctctgaccttcacctatattcactaaataaaatacagtacctgctggaattacatacaaatcccctgtctttattctcctttcctct |
22363057 |
T |
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| Q |
218 |
agttcatctc |
227 |
Q |
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|||||||||| |
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| T |
22363058 |
agttcatctc |
22363067 |
T |
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