View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10861_low_29 (Length: 234)
Name: NF10861_low_29
Description: NF10861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10861_low_29 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 32095177 - 32095381
Alignment:
| Q |
15 |
aagaaaaatgatcagaaagatggttctaagcaatgtagttttatatctcagaagcaatgttctcaaaggatatttcttccaaaggaatggacttactagc |
114 |
Q |
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| T |
32095177 |
aagaaaaatgatcagaaagatggttctaagcaatgtagttttatatctcagaagcaatgttctcaaaggatatttcttccaaaggaatggacttactagc |
32095276 |
T |
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| Q |
115 |
tatatcttcatttgggaataagagaacaattatatttgagagggacataaataaaacaactatttctgatgcctatgtagtatgcataaaagctaggata |
214 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32095277 |
tatctcttcatttgggaataagagaacaattatatttgagagggacataaataaaacaactatttctgatgcctatgtagtatgcataaaagctaggata |
32095376 |
T |
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| Q |
215 |
gtttg |
219 |
Q |
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||||| |
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| T |
32095377 |
gtttg |
32095381 |
T |
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