View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10862_high_12 (Length: 347)
Name: NF10862_high_12
Description: NF10862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10862_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 16 - 331
Target Start/End: Complemental strand, 2795180 - 2794873
Alignment:
| Q |
16 |
agataagttgcacctgttttctgctggttgcgttttacaagatcatcaaatcacgttgggaccaaagtaaatgactttt-ctgtcttgagcgtctcttcg |
114 |
Q |
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| T |
2795180 |
agataagttgcacctgttttctgctggttgcattttacaagatcatcaaatcacgttgggaccaaagtaaatgactttttctgtcttgagtgtctcttcg |
2795081 |
T |
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| Q |
115 |
tcatacatacccaaccagaatcacaaaatgttgtaagcttaggattttatgcattgattagataaattccatgtgaaatgtttgatttgagacattatag |
214 |
Q |
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| T |
2795080 |
tcatacatacccaaccagaatcacaaaatgttgtaagct---------atgcattgattagataaattccatgtgaaatggttgatttgagacattatag |
2794990 |
T |
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| Q |
215 |
aataggcttcaatgcataaatgtttttctgaagtttgtgattgcatatgctggaaaaatttgttggctgaaaatgtaaaatccgagtgatggatgttaga |
314 |
Q |
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| T |
2794989 |
aataggcttcaatgcatgaatgtctttctgaagtttgtgattgcatatgctggaaaaatttgttggctgaaaatgtaaaatccgagtgatggatgttaga |
2794890 |
T |
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| Q |
315 |
taatgcaaggaaccaac |
331 |
Q |
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| T |
2794889 |
taatgcaaggaaccaac |
2794873 |
T |
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