View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10862_high_21 (Length: 275)
Name: NF10862_high_21
Description: NF10862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10862_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 6 - 264
Target Start/End: Complemental strand, 35223697 - 35223446
Alignment:
| Q |
6 |
actacttactagttttcttgcaggaacaagcaaaaatgagaatgatgaggcaggaaagttctggtagaacagattcttcttgggacaatctttggggtca |
105 |
Q |
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| T |
35223697 |
actacttactagttttcttgcaggaacaagcaaaaatgagaatgatgaggcaggaaagttctggtaaaacagattcttattgggacaatctttggggtca |
35223598 |
T |
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| Q |
106 |
accaaaagactatcaaaattcaggtattgcggattcgaaagcaccaaagggatatatataaactttaaactaatggaaatcaaaatcaataatcataata |
205 |
Q |
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| T |
35223597 |
accaaaagactatcaaaattcaggtattgcggattcgaaagcacgaaagggatatatataaac-ttaaactaatgg------aaatcaataatcatatta |
35223505 |
T |
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| Q |
206 |
attatttccaaatgtttgtgttttagcctaatcggtgctgtattgtttcaagtcttcat |
264 |
Q |
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| T |
35223504 |
attatttccaaatgtttgtgttttagcctaatcggtgctgtattgtttcaagtcttcat |
35223446 |
T |
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