View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10862_high_31 (Length: 237)

Name: NF10862_high_31
Description: NF10862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10862_high_31
NF10862_high_31
[»] chr3 (38 HSPs)
chr3 (1-234)||(55302145-55302378)
chr3 (1-234)||(54593460-54593692)
chr3 (1-234)||(6095779-6096012)
chr3 (9-234)||(34490968-34491193)
chr3 (1-234)||(49199650-49199884)
chr3 (1-234)||(30235880-30236113)
chr3 (7-234)||(46860226-46860454)
chr3 (4-234)||(4569706-4569936)
chr3 (1-234)||(47304007-47304239)
chr3 (7-234)||(36018606-36018833)
chr3 (13-234)||(40913093-40913315)
chr3 (7-233)||(41819710-41819933)
chr3 (1-234)||(43403925-43404146)
chr3 (1-234)||(43401982-43402203)
chr3 (4-232)||(5434062-5434289)
chr3 (35-206)||(1683270-1683440)
chr3 (4-129)||(26323258-26323383)
chr3 (4-206)||(35138890-35139091)
chr3 (1-77)||(31340381-31340457)
chr3 (117-234)||(28074372-28074488)
chr3 (37-146)||(34795712-34795819)
chr3 (4-115)||(39127421-39127531)
chr3 (1-44)||(46173311-46173354)
chr3 (31-145)||(20937501-20937613)
chr3 (4-46)||(9666651-9666693)
chr3 (4-45)||(29196571-29196612)
chr3 (4-45)||(44700662-44700703)
chr3 (35-93)||(36796692-36796749)
chr3 (87-145)||(50432840-50432898)
chr3 (4-45)||(5236640-5236680)
chr3 (4-45)||(9581227-9581267)
chr3 (4-45)||(19684073-19684113)
chr3 (4-45)||(23392093-23392133)
chr3 (4-45)||(29682303-29682343)
chr3 (4-45)||(29810812-29810852)
chr3 (4-45)||(40734442-40734482)
chr3 (4-45)||(44331489-44331529)
chr3 (194-234)||(31340449-31340489)
[»] chr5 (20 HSPs)
chr5 (1-234)||(40147016-40147249)
chr5 (1-232)||(27015289-27015520)
chr5 (1-234)||(213224-213453)
chr5 (1-234)||(38746760-38746993)
chr5 (1-219)||(5057817-5058035)
chr5 (1-220)||(28278085-28278304)
chr5 (7-234)||(27637800-27638028)
chr5 (9-222)||(4160401-4160611)
chr5 (31-234)||(316521-316720)
chr5 (4-144)||(16641124-16641263)
chr5 (4-221)||(33906211-33906428)
chr5 (31-145)||(14689622-14689734)
chr5 (41-180)||(21205873-21206011)
chr5 (9-129)||(35616031-35616149)
chr5 (18-106)||(8019471-8019557)
chr5 (150-233)||(30802697-30802780)
chr5 (4-45)||(533713-533753)
chr5 (4-45)||(5887600-5887640)
chr5 (151-218)||(16642208-16642275)
chr5 (4-44)||(42926838-42926877)
[»] chr7 (25 HSPs)
chr7 (1-234)||(34310896-34311129)
chr7 (1-234)||(6431726-6431959)
chr7 (4-227)||(2390044-2390267)
chr7 (2-227)||(48599515-48599740)
chr7 (1-233)||(4512570-4512801)
chr7 (1-232)||(2361152-2361382)
chr7 (9-234)||(29608496-29608716)
chr7 (1-233)||(4508886-4509117)
chr7 (1-233)||(4510728-4510959)
chr7 (1-234)||(6360092-6360325)
chr7 (7-219)||(3258766-3258976)
chr7 (1-206)||(8359497-8359703)
chr7 (7-219)||(22269744-22269954)
chr7 (4-234)||(22328581-22328812)
chr7 (9-146)||(1360341-1360479)
chr7 (176-234)||(32358191-32358249)
chr7 (4-45)||(36146592-36146633)
chr7 (31-107)||(37545121-37545195)
chr7 (4-45)||(4538724-4538764)
chr7 (18-145)||(23794024-23794149)
chr7 (4-45)||(24526081-24526121)
chr7 (4-45)||(31733153-31733193)
chr7 (4-45)||(43864188-43864228)
chr7 (4-45)||(48489375-48489415)
chr7 (5-45)||(47676321-47676360)
[»] chr1 (36 HSPs)
chr1 (1-234)||(11348453-11348686)
chr1 (1-234)||(37033253-37033486)
chr1 (1-234)||(37168052-37168285)
chr1 (1-222)||(37879091-37879312)
chr1 (1-234)||(29136003-29136235)
chr1 (1-227)||(13547269-13547495)
chr1 (1-227)||(13549180-13549406)
chr1 (7-234)||(28242144-28242370)
chr1 (1-234)||(47114927-47115159)
chr1 (7-234)||(34603331-34603557)
chr1 (1-234)||(193367-193599)
chr1 (1-234)||(42298155-42298388)
chr1 (7-220)||(7482418-7482629)
chr1 (1-222)||(19754258-19754482)
chr1 (1-214)||(31925887-31926099)
chr1 (1-234)||(47255520-47255747)
chr1 (1-234)||(19752441-19752673)
chr1 (38-234)||(34602557-34602752)
chr1 (9-204)||(41135605-41135800)
chr1 (31-145)||(22079166-22079278)
chr1 (59-227)||(12318720-12318886)
chr1 (7-173)||(6808263-6808427)
chr1 (32-232)||(16216709-16216904)
chr1 (4-143)||(25651931-25652070)
chr1 (35-115)||(3331428-3331505)
chr1 (5-45)||(928162-928202)
chr1 (32-115)||(10157490-10157571)
chr1 (4-47)||(15820249-15820291)
chr1 (4-45)||(197092-197132)
chr1 (4-45)||(3847305-3847345)
chr1 (131-207)||(4535784-4535861)
chr1 (100-153)||(9109680-9109733)
chr1 (4-45)||(10925167-10925207)
chr1 (4-45)||(28265738-28265778)
chr1 (4-45)||(50167359-50167399)
chr1 (4-44)||(1833467-1833506)
[»] chr2 (25 HSPs)
chr2 (1-227)||(1631912-1632138)
chr2 (5-232)||(42288294-42288520)
chr2 (1-219)||(35447064-35447282)
chr2 (1-234)||(45726685-45726917)
chr2 (5-234)||(24397812-24398038)
chr2 (4-234)||(17450346-17450575)
chr2 (7-234)||(33647924-33648151)
chr2 (119-234)||(7451055-7451170)
chr2 (35-145)||(30218250-30218358)
chr2 (41-146)||(43730991-43731093)
chr2 (35-146)||(42261826-42261935)
chr2 (18-56)||(24197829-24197867)
chr2 (4-45)||(723928-723968)
chr2 (4-45)||(11049493-11049534)
chr2 (4-45)||(11067249-11067289)
chr2 (4-45)||(11151775-11151815)
chr2 (4-45)||(11690445-11690485)
chr2 (4-45)||(13121712-13121753)
chr2 (4-45)||(14634010-14634050)
chr2 (4-45)||(24885605-24885645)
chr2 (4-45)||(29867813-29867853)
chr2 (4-45)||(34139955-34139995)
chr2 (4-45)||(36773506-36773546)
chr2 (4-45)||(39284829-39284869)
chr2 (4-45)||(42362296-42362336)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-234)||(7083-7315)
[»] chr8 (23 HSPs)
chr8 (1-234)||(42435171-42435404)
chr8 (1-221)||(40221513-40221733)
chr8 (1-234)||(11383741-11383974)
chr8 (2-234)||(40328534-40328766)
chr8 (4-222)||(44353559-44353777)
chr8 (1-192)||(4283321-4283512)
chr8 (1-144)||(18655246-18655388)
chr8 (133-234)||(22976289-22976389)
chr8 (57-145)||(40585569-40585656)
chr8 (1-46)||(10930379-10930424)
chr8 (32-145)||(33655516-33655628)
chr8 (4-45)||(18141764-18141805)
chr8 (35-115)||(10020321-10020398)
chr8 (4-43)||(8965875-8965914)
chr8 (31-85)||(10240061-10240113)
chr8 (4-45)||(4731602-4731642)
chr8 (4-45)||(15212730-15212770)
chr8 (4-45)||(30291549-30291590)
chr8 (4-45)||(41365031-41365071)
chr8 (4-45)||(43036367-43036407)
chr8 (135-218)||(3817647-3817729)
chr8 (19-145)||(10101351-10101475)
chr8 (4-44)||(41366798-41366837)
[»] chr4 (48 HSPs)
chr4 (1-234)||(50674026-50674259)
chr4 (1-234)||(54882775-54883008)
chr4 (4-234)||(55085548-55085778)
chr4 (1-234)||(50262878-50263111)
chr4 (7-234)||(8665162-8665389)
chr4 (1-219)||(12073162-12073380)
chr4 (1-234)||(6655711-6655944)
chr4 (7-234)||(379134-379360)
chr4 (7-234)||(41964172-41964396)
chr4 (7-234)||(8647893-8648120)
chr4 (8-234)||(35662197-35662421)
chr4 (7-233)||(46703257-46703481)
chr4 (32-234)||(26364020-26364222)
chr4 (1-234)||(2209463-2209701)
chr4 (19-221)||(33989631-33989831)
chr4 (1-234)||(27417145-27417364)
chr4 (5-215)||(12119314-12119521)
chr4 (95-234)||(40630739-40630878)
chr4 (1-100)||(40632334-40632433)
chr4 (4-162)||(26699629-26699786)
chr4 (31-136)||(41961264-41961368)
chr4 (35-234)||(33089654-33089841)
chr4 (45-208)||(34112392-34112555)
chr4 (91-234)||(46569816-46569959)
chr4 (5-70)||(41639345-41639410)
chr4 (4-145)||(35369625-35369763)
chr4 (43-145)||(3785934-3786034)
chr4 (35-145)||(35370553-35370661)
chr4 (32-145)||(22882964-22883077)
chr4 (32-145)||(22934628-22934741)
chr4 (1-49)||(21688188-21688236)
chr4 (4-45)||(24969055-24969096)
chr4 (31-144)||(32091324-32091435)
chr4 (4-45)||(52467538-52467579)
chr4 (4-44)||(5208026-5208066)
chr4 (5-45)||(41639207-41639247)
chr4 (4-45)||(4587902-4587942)
chr4 (4-45)||(5429623-5429663)
chr4 (4-45)||(5871764-5871804)
chr4 (4-45)||(13009615-13009655)
chr4 (4-45)||(26175820-26175860)
chr4 (4-45)||(48142986-48143026)
chr4 (4-45)||(52065540-52065581)
chr4 (4-45)||(52082841-52082881)
chr4 (4-45)||(52095546-52095586)
chr4 (40-92)||(6719479-6719531)
chr4 (4-44)||(12745620-12745659)
chr4 (5-45)||(37229907-37229947)
[»] chr6 (16 HSPs)
chr6 (1-234)||(603260-603493)
chr6 (1-234)||(5043383-5043615)
chr6 (1-234)||(21593421-21593652)
chr6 (4-234)||(2973122-2973352)
chr6 (5-220)||(3808893-3809107)
chr6 (7-234)||(17762742-17762971)
chr6 (1-234)||(26830304-26830537)
chr6 (7-234)||(22425014-22425240)
chr6 (78-234)||(17757837-17757995)
chr6 (9-148)||(5740978-5741117)
chr6 (9-93)||(25073463-25073548)
chr6 (125-227)||(26800533-26800634)
chr6 (21-89)||(11660507-11660574)
chr6 (4-47)||(4045364-4045407)
chr6 (4-45)||(9183215-9183255)
chr6 (4-45)||(28137592-28137632)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-234)||(80463-80696)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-222)||(18183-18402)
[»] scaffold0286 (1 HSPs)
scaffold0286 (4-234)||(11313-11541)
[»] scaffold0197 (1 HSPs)
scaffold0197 (15-144)||(1591-1729)
[»] scaffold0053 (1 HSPs)
scaffold0053 (9-41)||(25000-25032)
[»] scaffold0002 (1 HSPs)
scaffold0002 (35-146)||(490661-490770)


Alignment Details
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 55302145 - 55302378
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||    
T  55302145 ctcatgattttcactctcccaaggtatttacaattgtttcccaactctataatctaacctacaaaagagaaccaacccctagcctttgatttcactaagg 55302244  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  55302245 atcttctcttttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaacctcatgaatttttcccaaaaggcaccaa 55302344  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||| ||||| |||| ||||||    
T  55302345 cccttttcccaagagctccctcttttggttctcc 55302378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 54593692 - 54593460
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  54593692 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaac-aacccttagcctttgatttcactaagg 54593594  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||| |||||||||| | |||||    
T  54593593 atcttctattttggtttcacaagactcactcaagttgctcacaaaagactctccactcatgtgttttccatccccatgaatcttccccaaaaggtaccaa 54593494  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||||||| |||| ||||||    
T  54593493 cccttttcccaagagccccctcttttggttctcc 54593460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 6095779 - 6096012
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  6095779 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacctttagcatttgatttcactaagg 6095878  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| ||||||  |||||| |||||||||| |||||||    
T  6095879 atcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 6095978  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||  |||||||||||| |||| ||||||    
T  6095979 cccttttcaaaagagccccctcttttggttctcc 6096012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 9 - 234
Target Start/End: Complemental strand, 34491193 - 34490968
Alignment:
Q  9 tttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttcta 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  34491193 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctc 34491094  T
Q  109 ttttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttttc 208  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||| ||||   |||||| ||| |||||| |||||||||||||||    
T  34491093 ttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttttcaactccatgaatcttctccaaaaggcaccaacccttttc 34490994  T
Q  209 ccaagagccccctcctttgcttctcc 234  Q
     ||||||||||||| |||| ||||||    
T  34490993 acaagagccccctcttttggttctcc 34490968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 49199650 - 49199884
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49199650 ctcatgattttcactctcccaaagtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaagg 49199749  T
Q  101 atcttctattttggtttcacaagactc-actcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcacca 199  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||||| ||||||||||| ||||| ||||||  |||||| |||||||||| ||||||    
T  49199750 atcttctcttttggtttcacaagactcaacccaagttgctcacaaaagactctccactcatatgtttcccaaccccatgaatcttccccaaaaggcacca 49199849  T
Q  200 acccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||| ||| ||||||||| |||| ||||||    
T  49199850 acccttttcacaatagccccctcttttggttctcc 49199884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 30236113 - 30235880
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  30236113 ctcatgattttcactatcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaatcattagccttcgatttcactaagg 30236014  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||| || ||||||||| ||||||||||||||  |||||| |||||||||| |||||||    
T  30236013 atcttctcttttggtttcacaagactcacccaacttgctcacaaatgactctccactcttgtgttttccaaccccatgaatattccccaaaaggcaccaa 30235914  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||| ||||||||||||| |||| ||||||    
T  30235913 cccttttcacaagagccccctcttttggttctcc 30235880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 46860454 - 46860226
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaaccct--tagcctttgatttcactaaggatct 104  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||  ||| |||||||||| ||||||||||    
T  46860454 attttcactctcccaaggtgtttacaattgtttctcaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatct 46860356  T
Q  105 tctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccct 204  Q
    ||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| ||| || ||||||| |||||||||| |||||||||||    
T  46860355 tctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccatccctatgaatcttccccaaaaggcaccaaccct 46860256  T
Q  205 tttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||| |||| ||||||    
T  46860255 tttcccaagagccccctcttttggttctcc 46860226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 4 - 234
Target Start/End: Complemental strand, 4569936 - 4569706
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  4569936 atgattttcactcacccaaggtgtttacaattgttttccaactctagaatctaaccaccaaaagagaaccaacccttagcctttgatttcactaaagatc 4569837  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccc 203  Q
     ||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| |||||||| | ||||   |||    
T  4569836 atctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttccccaataggcacaccccc 4569737  T
Q  204 ttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||||||||||||| |||| ||||||    
T  4569736 ttttcccaagagccccctcttttgattctcc 4569706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 47304239 - 47304007
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  47304239 ctcatgattttcactctcccagggtgtttaaaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagtttttgatttcactaagg 47304140  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    || |||| ||||||||| |||||||||||  ||||||||||||||| | ||||||||||||||||| ||||||  |||||| |||||||||| |||||||    
T  47304139 atattctcttttggttttacaagactcacctaagttgctcacaaaa-actctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 47304041  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||||||| |||| ||||||    
T  47304040 cccttttcccaagagccccctcttttggttctcc 47304007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 36018833 - 36018606
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || |||||||||||||||||||||||||||    
T  36018833 attttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaaccccaaaagagaaccaatccatagcctttgatttcactaaggatcttc 36018734  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | ||||||||||||||||||||| ||||||||||||||| || |||||| |||||||||| ||| ||  ||| || |||||||||| |||||||||||||    
T  36018733 tcttttggtttcacaagactcacccaagttgctcacaaatgactctccattcatgtgtttcccatccccatggatcttccccaaaaggcaccaacccttt 36018634  T
Q  207 tcccaagagccccctcctttgcttctcc 234  Q
    |||||| ||| ||||| |||| ||||||    
T  36018633 tcccaaaagctccctcttttggttctcc 36018606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 40913315 - 40913093
Alignment:
Q  13 actctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctatttt 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  40913315 actctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttaacctttaatttcactaaggatcttctctttt 40913216  T
Q  113 ggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttc-cccaaaatgcaccaacccttttccca 211  Q
    | ||||||||||||||| ||| ||||||||||| || ||||||||||||||||| ||||||  |||||| ||| || |||| ||||||||||||||||||    
T  40913215 gctttcacaagactcacccaatttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatcttctccaaaaaggcaccaacccttttccca 40913116  T
Q  212 agagccccctcctttgcttctcc 234  Q
    ||||||||||| |||| ||||||    
T  40913115 agagccccctcttttggttctcc 40913093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 7 - 233
Target Start/End: Original strand, 41819710 - 41819933
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||| | |||||||||||||||||||| ||||||||||| ||| |||||||    
T  41819710 attttcactctcccaaggtgtttacaattatttcccaactctagaatctaaccgctaaaagagaaccaacccttag-ctttgatttca-taaagatcttc 41819807  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| ||||||  |||||| || ||||||| |||||||||||||    
T  41819808 tcttttggtttcataagactcactcaagttgctcacaaatgagtctccactcatgtgtttcccaaccccatgaatctt-cccaaaaggcaccaacccttt 41819906  T
Q  207 tcccaagagccccctcctttgcttctc 233  Q
    |||||||||||||||| |||| |||||    
T  41819907 tcccaagagccccctcttttggttctc 41819933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 43403925 - 43404146
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || ||            |||||||||||||| |||||||||||||||||||||    
T  43403925 ctcatgattttcactctcccaaagtgtttacaattgtttcccaactttagaa------------aagagaaccaacccatagcctttgatttcactaagg 43404012  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| |||| |||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||  |||||| |||||||||| |||||||    
T  43404013 atcttctcttttagtttcacaagactcacccaagttgctcccaaatgactctccactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaa 43404112  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||||||| |||| ||||||    
T  43404113 cccttttcccaagagccccctcttttggttctcc 43404146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 43401982 - 43402203
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||            |||||||||||||| |||||||||||||||||||||    
T  43401982 ctcatgattttcactctcccaaggtgtttacaatcgtttcccaactctagaa------------aagagaaccaacccatagcctttgatttcactaagg 43402069  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| |||||||||||||||||| || ||||||| ||||||| || ||||||||||||||||| ||||||  |||||| |||||||||| |||||||    
T  43402070 atcttctcttttggtttcacaagacttacccaagttgttcacaaatgattctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 43402169  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||| ||||||||||||| |||| ||||||    
T  43402170 cccttttctcaagagccccctcttttggttctcc 43402203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 4 - 232
Target Start/End: Original strand, 5434062 - 5434289
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| |||||||| || ||||||||    
T  5434062 atgattttcactcacc-aaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaatcaatctttagtctttgattaca-taaggatc 5434159  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaacc 202  Q
    |||| |||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||||| | ||||  |||||| | |||| ||||  ||| ||||    
T  5434160 ttctcttttggtttcccaagactcacccaacttgctcacaaaagactctccactcatgtgtttcctaaccccatgaatctctccctaaaaaacactaacc 5434259  T
Q  203 cttttcccaagagccccctcctttgcttct 232  Q
    |||||||||||||||||||| |||| ||||    
T  5434260 cttttcccaagagccccctcttttggttct 5434289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 206
Target Start/End: Complemental strand, 1683440 - 1683270
Alignment:
Q  35 tgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaag 134  Q
    ||||||||||||||| | ||||||||| |||||| |||||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||  |||    
T  1683440 tgtttcccaactctagattctaacccc-aaaagataaccaacccttagcctttgatttt-ctaaggatcttctcttttggtctcacaagactcaccaaag 1683343  T
Q  135 ttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaacccttt 206  Q
    ||||||| ||| || | ||||||||||||||||||||||  |||||| | | |||||||||||||||||||||    
T  1683342 ttgctcataaatgattatccactcatgtgttttccaaccccatgaatctcttcccaaaatgcaccaacccttt 1683270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 26323258 - 26323383
Alignment:
Q  4 atgattttcactctcccaaggtgtttac-aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggat 102  Q
    ||||| ||||||| | |||||||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  26323258 atgatgttcactcactcaaggtgtttcccaattgtttcccaactctaaaatctaaccctcaaaagagaaccaacccttagcttttgatttc-ctaaggat 26323356  T
Q  103 cttctattttggtttcacaagactcac 129  Q
     |||| ||||||| || ||||||||||    
T  26323357 attcttttttggtctcccaagactcac 26323383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 206
Target Start/End: Original strand, 35138890 - 35139091
Alignment:
Q  4 atgattttcactctcccaaggtgttt-acaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttg-atttcactaagga 101  Q
    |||||||||||||||||||||||||| |||||||||||| |||| || ||| ||||||| |||||||||  |||||||||| |||  ||||| |||||||    
T  35138890 atgattttcactctcccaaggtgtttcacaattgtttcc-aactttaaaatttaacccc-aaaagagaattaacccttagcttttttatttc-ctaagga 35138986  T
Q  102 tcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaa 200  Q
    |||||||||||||| || ||||||||| ||||||||||||  ||||| ||||   | || ||||||||||||| |||||| | ||| ||||| ||| |||    
T  35138987 tcttctattttggtctcccaagactcattcaagttgctca-taaagactctcatttgatttgttttccaacctcatgaatctctcctcaaaaggcatcaa 35139085  T
Q  201 cccttt 206  Q
    ||||||    
T  35139086 cccttt 35139091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31340381 - 31340457
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | |||||||    
T  31340381 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccctaaaagggcaccaacc 31340457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 28074488 - 28074372
Alignment:
Q  117 tcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttttcccaagagc 216  Q
    |||||||||||||  ||||| ||| ||| ||| ||||||||||||||||| ||| ||  |||||| |||||||||| ||||||| |  ||||||||||||    
T  28074488 tcacaagactcacctaagtttctctcaatagactctccactcatgtgtttcccatccccatgaatcttccccaaaacgcaccaa-ctatttcccaagagc 28074390  T
Q  217 cccctcctttgcttctcc 234  Q
    |||||| |||| ||||||    
T  28074389 cccctcttttggttctcc 28074372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 146
Target Start/End: Complemental strand, 34795819 - 34795712
Alignment:
Q  37 tttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagtt 136  Q
    |||||||||| || ||| ||||| | |||||||||||| |||||||||||||||||  ||||||||||||| ||||||| || |||||||||| ||||||    
T  34795819 tttcccaactttagaatttaaccac-aaaagagaaccatcccttagcctttgatttt-ctaaggatcttctcttttggtctcccaagactcacccaagtt 34795722  T
Q  137 gctcacaaaa 146  Q
     || ||||||    
T  34795721 tcttacaaaa 34795712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 39127531 - 39127421
Alignment:
Q  4 atgattttcactctcccaaggtgtttac-aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggat 102  Q
    |||||||||||||| ||||||| ||| | |||||||||| ||||||| ||| ||||| | |||||||||| |||||||||||||||||||| |||||| |    
T  39127531 atgattttcactcttccaaggtattttccaattgtttccaaactctagaatttaaccac-aaaagagaactaacccttagcctttgatttc-ctaagggt 39127434  T
Q  103 cttctattttggt 115  Q
     |||| |||||||    
T  39127433 attctcttttggt 39127421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46173354 - 46173311
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaa 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  46173354 ctcatgattttcactctcccaaggtgtttacaattgtttcccaa 46173311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 145
Target Start/End: Complemental strand, 20937613 - 20937501
Alignment:
Q  31 caattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcact 130  Q
    ||||| |||| |||||||| |||||| | |||||||||||||||||| ||| ||||||||||| ||||| ||||||| ||||||| || ||||| ||||     
T  20937613 caattatttctcaactctagaatcta-ctcccaaaagagaaccaacctttatcctttgatttc-ctaagaatcttctcttttggtctcccaagaatcacc 20937516  T
Q  131 caagttgctcacaaa 145  Q
    ||||||  |||||||    
T  20937515 caagtttgtcacaaa 20937501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 9666651 - 9666693
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaact 46  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  9666651 atgattttcactcacccaaggtgtttacaaatgtttcccaact 9666693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 29196571 - 29196612
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  29196571 atgattttcactcacccaaggtgtttacaaatgtttcccaac 29196612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 44700662 - 44700703
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  44700662 atgattttcactcacccaaggtgtttacaaatgtttcccaac 44700703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 36796749 - 36796692
Alignment:
Q  35 tgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttc 93  Q
    ||||||||||||||  |||||||||| ||||||  || |||||||||||||||||||||    
T  36796749 tgtttcccaactcttgaatctaaccctcaaaagt-aatcaacccttagcctttgatttc 36796692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 50432840 - 50432898
Alignment:
Q  87 tgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaa 145  Q
    |||||||||||||||||| || ||||||| || ||||| |||  |||||||||||||||    
T  50432840 tgatttcactaaggatctccttttttggtctctcaagattcaaccaagttgctcacaaa 50432898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 5236640 - 5236680
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  5236640 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 5236680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 9581267 - 9581227
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  9581267 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 9581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 19684073 - 19684113
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  19684073 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 19684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 23392093 - 23392133
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  23392093 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 23392133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 29682343 - 29682303
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  29682343 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 29682303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 29810852 - 29810812
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  29810852 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 29810812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 40734482 - 40734442
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  40734482 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 40734442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 44331529 - 44331489
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  44331529 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 44331489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 31340449 - 31340489
Alignment:
Q  194 gcaccaacccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||| ||||||||||||||||||| |||| ||||||    
T  31340449 gcaccaaccattttcccaagagccccctcttttggttctcc 31340489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 40147249 - 40147016
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40147249 ctcatgatttccactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 40147150  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| |||||||||| |||||||    
T  40147149 atcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 40147050  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    || ||||||||||||||||||| |||| ||||||    
T  40147049 ccattttcccaagagccccctcttttggttctcc 40147016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 27015520 - 27015289
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27015520 ctcatgattttcactctcccaagatgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 27015421  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||| | |||||||||| |||||||    
T  27015420 atcttctcttttggttttacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgattcttccccaaaaggcaccaa 27015321  T
Q  201 cccttttcccaagagccccctcctttgcttct 232  Q
    |||||||| ||||||||||||| |||| ||||    
T  27015320 cccttttcacaagagccccctcttttggttct 27015289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 213453 - 213224
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||||||||||||||||||||    
T  213453 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaacc----cttagcctttgatttcactaagg 213358  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| ||| |||||| |||||||    
T  213357 atcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaa 213258  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||||||| |||| ||||||    
T  213257 cccttttcccaagagccccctcttttggttctcc 213224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 38746993 - 38746760
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38746993 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcaataagg 38746894  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||| |||| || |||||||||| |||||| ||||||  |||||| |||||||||| |||||||    
T  38746893 atcttctcttttggtttcacaagactcacccaagttgctcgcaaatgactctccactcacgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 38746794  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||  |||||||||||| |||| ||||||    
T  38746793 cccttttcttaagagccccctcttttggttctcc 38746760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 5058035 - 5057817
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5058035 ctcatgattttcactcttccaaggtgtttacaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattttactaagg 5057936  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||  |||||| |||||||||| |||||||    
T  5057935 atcttctcttttggtttcacaagactcgcccaagttgctcacaaatgactctccactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaa 5057836  T
Q  201 cccttttcccaagagcccc 219  Q
    || ||||||||| ||||||    
T  5057835 cctttttcccaaaagcccc 5057817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 28278304 - 28278085
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||||||      
T  28278304 ctcatgattttcactctcccaatgtgtttacaattgtttcccaactctagaatctaacccctaaaagagagccaacccttagcatttgatttcactaaca 28278205  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||| ||  ||||||||||||||||| ||||||  |||||| |||||||||| |||||||    
T  28278204 atcttctcttttgatttcacaagactcacccaagttgctcacaatagtctctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 28278105  T
Q  201 cccttttcccaagagccccc 220  Q
    ||||||||||||||||||||    
T  28278104 cccttttcccaagagccccc 28278085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 234
Target Start/End: Original strand, 27637800 - 27638028
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatct-- 104  Q
    ||||||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||||||||| |||  |||| |||||||||||||||||||||      
T  27637800 attttcactcttccaaggtgttcacaattgtttcccaactctagcatctaacccccaaaagagaacaaacttttagtctttgatttcactaaggatcttc 27637899  T
Q  105 tctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccct 204  Q
    ||| ||||||||||||||||||||| ||||||||||| |||||| ||| ||||||||||||| | ||||  |||||| || |||||||||||||||||||    
T  27637900 tctcttttggtttcacaagactcacccaagttgctcataaaagactcttcactcatgtgtttcctaaccccatgaatctt-cccaaaatgcaccaaccct 27637998  T
Q  205 tttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||| ||||| |||| ||||||    
T  27637999 tttcccaagagctccctcttttggttctcc 27638028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 4160611 - 4160401
Alignment:
Q  9 tttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttcta 108  Q
    ||||||||  |||| ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||     
T  4160611 tttcactcaaccaatgtgtttacaattgtttctcaactctg-aatctaacccccaaaagagaaccaacccttagcctttaattac-ctaaggatcttctc 4160514  T
Q  109 ttttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaaccctttt 207  Q
    |||||||||| ||||| |||| | ||||||||||||| || |||||||| | ||| || |||||| ||||||| | |||||||||  |||  |||| | |    
T  4160513 ttttggtttcccaagattcaccctagttgctcacaaatgactctccacttacgtg-ttcccaaccctatgaatctctccccaaaagacacttaccc-tct 4160416  T
Q  208 cccaagagccccctc 222  Q
    |||||||||||||||    
T  4160415 cccaagagccccctc 4160401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 234
Target Start/End: Complemental strand, 316720 - 316521
Alignment:
Q  31 caattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcact 130  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||||||| || ||||| ||||     
T  316720 caattgttttccaactttaaaatctaacccccaaaagagaaccaacccttagcctttgatttc-ct-aggattttctcttttggtctcccaagattcac- 316624  T
Q  131 caagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaacccttttcccaagagccccctcctttgct 229  Q
    |||||||||||| ||||| ||||   | |||||||| |||||||||||||| | ||||||||| |||||||||| | |||||||||||||| | |||| |    
T  316623 caagttgctcac-aaagactctcttttgatgtgtttcccaaccttatgaatctctccccaaaaggcaccaaccc-tctcccaagagcccccccttttggt 316526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 16641124 - 16641263
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    |||| |||||||| | |||||||||||||| |||| |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||   |||| |||    
T  16641124 atgaatttcactcactcaaggtgtttacaaatgttccccaactctagaatctaatccccaaaagagaaccaacctttagcctttgattt-tttaagtatc 16641222  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaa 144  Q
    |||| |||||||||||||||||||||  |||||| ||||||    
T  16641223 ttctcttttggtttcacaagactcaccaaagttgttcacaa 16641263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 33906211 - 33906428
Alignment:
Q  4 atgattttcactctcccaaggtgttta-caattgtttcccaactctataatctaaccccc-aaaagagaaccaacccttagcctttgatttcactaagga 101  Q
    ||||| ||||||||| ||||||||||  || ||||||| |||||||| ||| || ||||| ||||||   |||  | ||||||||||||||| |||||||    
T  33906211 atgatgttcactctcgcaaggtgtttctcatttgtttcacaactctagaatatatccccccaaaagaacgccagtcattagcctttgatttc-ctaagga 33906309  T
Q  102 tcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaa 200  Q
    |||||| |||||||||| |||||||||| ||||||||||||  |||  |||||  | ||||||||  |||||  |||||| | ||||||||| |||||||    
T  33906310 tcttctcttttggtttcccaagactcacccaagttgctcac-taagtctctcctttgatgtgtttctcaaccccatgaatctctccccaaaaggcaccaa 33906408  T
Q  201 cccttttcccaagagccccct 221  Q
    ||| | |||||||||||||||    
T  33906409 ccc-tctcccaagagccccct 33906428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 14689622 - 14689734
Alignment:
Q  31 caattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcact 130  Q
    |||||||||| |||||||| |||||| |||| |||||||||||||||| |||||||||||||  ||||||||||| | ||||||| || ||||||| |      
T  14689622 caattgtttcacaactctagaatctatcccc-aaaagagaaccaacccctagcctttgattt-tctaaggatcttttcttttggtgtcccaagacttatc 14689719  T
Q  131 caagttgctcacaaa 145  Q
     ||||||||||||||    
T  14689720 taagttgctcacaaa 14689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 180
Target Start/End: Original strand, 21205873 - 21206011
Alignment:
Q  41 ccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctc 140  Q
    ||||||| |||||||||||| |||||||||||||| |||||| ||||||||||| ||||| |||||  |||| |||||  || | |||| ||| || ||     
T  21205873 ccaactccataatctaaccctcaaaagagaaccaatccttagtctttgatttca-taaggttcttcacttttagtttcctaaaattcacccaaatttctg 21205971  T
Q  141 acaaaagaatctccactcatgtgttttccaaccttatgaa 180  Q
    ||||| || ||  ||||||||||||| |||||| ||||||    
T  21205972 acaaatgactcctcactcatgtgtttcccaaccctatgaa 21206011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 35616149 - 35616031
Alignment:
Q  9 tttcactctcccaaggtgtttac-aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttct 107  Q
    |||||||| |||||||||||| | |||||||||| ||||||| ||||||| || |||||||||| |||| | ||||||||||||||  | | |||||||     
T  35616149 tttcactcacccaaggtgtttcctaattgtttccaaactctagaatctaa-ccacaaaagagaatcaactc-tagcctttgatttc-ttgatgatcttcg 35616053  T
Q  108 attttggtttcacaagactcac 129  Q
     |||||||||| ||||||||||    
T  35616052 cttttggtttcccaagactcac 35616031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 8019557 - 8019471
Alignment:
Q  18 cccaaggtgtttac-aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    |||||||||||| | |||| |||||||||| || |||||||||||||||| | |||||| ||||||||||||||||  ||||||||||||    
T  8019557 cccaaggtgtttcctaattatttcccaactatagaatctaacccccaaaa-ataaccaa-ccttagcctttgattt-tctaaggatcttc 8019471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 30802780 - 30802697
Alignment:
Q  150 tctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaacccttttcccaagagccccctcctttgcttctc 233  Q
    ||||||||||||||||||| ||||  |||||| | ||||||||| |||| ||||| ||||||||||||| |||| |||| |||||    
T  30802780 tctccactcatgtgttttctaaccccatgaatctctccccaaaaggcacaaaccc-tttcccaagagcctcctcttttggttctc 30802697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 533753 - 533713
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  533753 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 533713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 5887600 - 5887640
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  5887600 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 5887640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 16642208 - 16642275
Alignment:
Q  151 ctccactcatgtgttttccaaccttatgaattt-tccccaaaatgcaccaacccttttcccaagagccc 218  Q
    |||||||||||||||| | ||||  |||||| | ||||||||| |||||||||| ||||||||||||||    
T  16642208 ctccactcatgtgtttcctaaccccatgaatctgtccccaaaaggcaccaaccc-tttcccaagagccc 16642275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 42926877 - 42926838
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaa 44  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  42926877 atgattttcactcacccaaggtgtttacaa-tgtttcccaa 42926838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 34310896 - 34311129
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34310896 ctcatgattttcactctcccaaggtgtttacaattatttcccaactctagaatctaacccccaaaagagaaccaacctttagcctttgatttcactaagg 34310995  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||  |||||  |||||||||| |||||||    
T  34310996 atcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgttttccatccccatgaaccttccccaaaaggcaccaa 34311095  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||||||| |||| ||||||    
T  34311096 cccttttcccaagagccccctcttttggttctcc 34311129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 6431959 - 6431726
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  6431959 ctcatgattttcactctcccaatgtgtttacaattgtttcccaactctagaatctaaccctcaaaagagaaccaacccttagcatttgatttcactaagg 6431860  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||  |||||| |||||||||| |||||||    
T  6431859 atcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctacactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaa 6431760  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||| ||||||||||||||| |||| ||||||    
T  6431759 ccctttccccaagagccccctcttttggttctcc 6431726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 2390267 - 2390044
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2390267 atgattttcgctctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 2390168  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccc 203  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||  |||||| ||||||||||  |||||||||    
T  2390167 ttctcttttggtttcacaagactcacccaagttgctcacaaaagactatccactcatgtgttttccaaccccatgaatcttccccaaaagccaccaaccc 2390068  T
Q  204 ttttcccaagagccccctcctttg 227  Q
    ||||| ||| ||||||||| ||||    
T  2390067 ttttcgcaatagccccctcttttg 2390044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 48599515 - 48599740
Alignment:
Q  2 tcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagga 101  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48599515 tcatgattttcactcctccaaggtgtttacaattgtttcccaactctagaatataacccccaaaagagaaccaacccttagcctttgatttcactaagga 48599614  T
Q  102 tcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaac 201  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||  |||||| |||||||||| ||||||||    
T  48599615 tcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctctactcatgttttttccaaccccatgaatcttccccaaaaggcaccaac 48599714  T
Q  202 ccttttcccaagagccccctcctttg 227  Q
    ||||||| ||||||||||||| ||||    
T  48599715 ccttttcacaagagccccctcttttg 48599740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 4512570 - 4512801
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  4512570 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatataacccccaaaagagaactaacccttagcctttgatttcactaagg 4512669  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| | ||||  |||||| |||||||||| |||||||    
T  4512670 atcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttccaaaccccatgaatcttccccaaaaggcaccaa 4512769  T
Q  201 cccttttcccaagagccccctcctttgcttctc 233  Q
    ||| |||||||||||||||||| |||| |||||    
T  4512770 ccc-tttcccaagagccccctcttttggttctc 4512801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 2361152 - 2361382
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  2361152 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacctc-aaaagagaaccaacccttagcctttgatttcactaagg 2361250  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  ||||||  ||||||||| |||||||    
T  2361251 atcttctcttttggtttcataagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcatccccaaaaggcaccaa 2361350  T
Q  201 cccttttcccaagagccccctcctttgcttct 232  Q
    |||||||| ||||||||||||| |||| ||||    
T  2361351 cccttttcacaagagccccctcttttgattct 2361382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 234
Target Start/End: Complemental strand, 29608716 - 29608496
Alignment:
Q  9 tttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttcta 108  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29608716 tttcgctctctcaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttcta 29608617  T
Q  109 ttttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttttc 208  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  ||||||     |||||| |||||||||||||||    
T  29608616 ttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaat-----ccaaaaggcaccaacccttttc 29608522  T
Q  209 ccaagagccccctcctttgcttctcc 234  Q
     ||||||||||||| |||| ||||||    
T  29608521 acaagagccccctcttttggttctcc 29608496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 4508886 - 4509117
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  4508886 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccataaaagagaaccaatccttagcctttgatttcactaagg 4508985  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||| | |||||||||||||||||||||  |||||||||||||| || ||||||||||||||||| ||||||  |||||| |||||||||| |||||||    
T  4508986 atcttatcttttggtttcacaagactcaccaaagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 4509085  T
Q  201 cccttttcccaagagccccctcctttgcttctc 233  Q
    ||| |||||||||||| ||||| |||| |||||    
T  4509086 ccc-tttcccaagagctccctcttttggttctc 4509117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 4510728 - 4510959
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||| | ||||||||||||||||||||||    
T  4510728 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccataaaagagaaccaatcgttagcctttgatttcactaagg 4510827  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| |||||||||||||||||||||  |||||||||||||| || ||||||||||||||||| ||||||  |||||| |||||||||| |||||||    
T  4510828 atcttctcttttggtttcacaagactcaccaaagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 4510927  T
Q  201 cccttttcccaagagccccctcctttgcttctc 233  Q
    ||| |||||||||||| ||||| |||| |||||    
T  4510928 ccc-tttcccaagagctccctcttttggttctc 4510959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 6360092 - 6360325
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6360092 ctcatgattttcattctcccaaggtgtttaaaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 6360191  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||| ||||   |||||| |||  ||||| ||||||     
T  6360192 atcttctcttttgatttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttttcaactccatgaatcttcttcaaaaggcaccat 6360291  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
     ||||||| ||||||||||||| |||| ||||||    
T  6360292 tccttttctcaagagccccctcttttggttctcc 6360325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 3258976 - 3258766
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||    
T  3258976 attttcactttcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaatgagaaccaacccttagg-tttgatttc-ctaaggatcttc 3258879  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | ||||||||||||||||||||| ||||||||| | |||||| ||||||||||| ||||| ||| ||  |||||| |||||||||| |||||||||||||    
T  3258878 tcttttggtttcacaagactcacccaagttgctaataaaagactctccactcatatgtttcccatccccatgaatcttccccaaaaggcaccaacccttt 3258779  T
Q  207 tcccaagagcccc 219  Q
    |||||||||||||    
T  3258778 tcccaagagcccc 3258766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 8359497 - 8359703
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaa-cccccaaaagagaaccaacccttagcctttgatttcactaag 99  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||| | ||||||| ||||||||| | ||||||| ||||||||||||||||||||||    
T  8359497 ctcatgattttcactctctcaaggtgtttacaattgttttccaactcaagaatctaaacccccaaaaaataaccaactcttagcctttgatttcactaag 8359596  T
Q  100 gatcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcacca 199  Q
    ||| |||| ||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||  |||||| |||||||||| ||||||    
T  8359597 gattttctcttttggtttcacaagactcatccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcacca 8359696  T
Q  200 acccttt 206  Q
    |||||||    
T  8359697 acccttt 8359703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 22269954 - 22269744
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  22269954 attttcactctcccaaggtgtttagaattgtttcc-aactctagaatctaacccccaaaagagaaccaacccatagcctatgatttcactaaggatcttc 22269856  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    ||||||||||||||||||||||| |||||| ||| ||| ||| ||||||||||||||||| ||  ||  |||||| |||||||||| |||||||| | ||    
T  22269855 tattttggtttcacaagactcacccaagtttctctcaatagactctccactcatgtgtttcccctccccatgaatcttccccaaaaggcaccaactc-tt 22269757  T
Q  207 tcccaagagcccc 219  Q
    |||||||||||||    
T  22269756 tcccaagagcccc 22269744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 234
Target Start/End: Original strand, 22328581 - 22328812
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaaccccc-aaaagagaaccaacccttagcctttgatttcactaaggat 102  Q
    |||||||||| || | ||||||||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||| ||||||| || |||||||    
T  22328581 atgattttcattccctcaaggtgtttacaattgtttcccaactttaggatctaaccccccaaaagagaaccaacccttagcttttgattaca-taaggat 22328679  T
Q  103 cttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaac 201  Q
     |||| |||| ||||| ||||| |||| ||||||||||||||| || |||| |||||||| ||| |||||| ||||||| | ||||||||| ||||||||    
T  22328680 attctcttttagtttcccaagattcacccaagttgctcacaaatgactctctactcatgtttttcccaaccctatgaatctctccccaaaaggcaccaac 22328779  T
Q  202 ccttttcccaagagccccctcctttgcttctcc 234  Q
     ||||||| |||||||||||| |||| ||||||    
T  22328780 tcttttcctaagagccccctcttttggttctcc 22328812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 1360341 - 1360479
Alignment:
Q  9 tttcactctcccaaggtgtttac-aattgtttcccaactctataatctaaccccc-aaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    |||||||| || ||||||||| | ||||||||  |||||||| |||||||||||| ||||||||||||| || || ||||||||||| | ||  || |||    
T  1360341 tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaaagagaaccaatccatatcctttgatttcccaaaa-atattc 1360439  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaa 146  Q
    | |||||||||  ||||||||||||||||||||| |||||    
T  1360440 tcttttggttttccaagactcactcaagttgctcgcaaaa 1360479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 32358191 - 32358249
Alignment:
Q  176 atgaattttccccaaaatgcaccaacccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||| |||| ||||||    
T  32358191 atgaattttccccaaaaggcaccaacccttttcacaagagccccctcttttggttctcc 32358249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 36146592 - 36146633
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  36146592 atgattttcactcacccaaggtgtttacaaatgtttcccaac 36146633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 37545121 - 37545195
Alignment:
Q  31 caattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttct 107  Q
    ||||||||||| |||||| ||||||||||   |||| ||||||||| |||||||||||||||   ||||||||||||    
T  37545121 caattgtttcctaactctgtaatctaacct--aaaaaagaaccaactcttagcctttgatttttgtaaggatcttct 37545195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 4538724 - 4538764
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  4538724 atgattttcactcacccaaggtgtttacaatt-tttcccaac 4538764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 23794024 - 23794149
Alignment:
Q  18 cccaaggtgtttacaa-ttgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtt 116  Q
    ||||| |||||||||| ||||||  |||||||| ||||||||| | ||| ||  ||||||| ||||||||||||||  |||||||||| || |||||||     
T  23794024 cccaatgtgtttacaaattgtttttcaactctagaatctaaccacaaaatga--accaaccattagcctttgattt-tctaaggatctcctcttttggtc 23794120  T
Q  117 tcacaagactcactcaagttgctcacaaa 145  Q
    ||  | || |||| ||| |||||||||||    
T  23794121 tcttacgattcacccaaattgctcacaaa 23794149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 24526081 - 24526121
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  24526081 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 24526121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 31733153 - 31733193
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  31733153 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 31733193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 43864228 - 43864188
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  43864228 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 43864188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 48489415 - 48489375
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  48489415 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 48489375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 47676321 - 47676360
Alignment:
Q  5 tgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  47676321 tgattttcactcacccaaggtgtttacaa-tgtttcccaac 47676360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 11348686 - 11348453
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11348686 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 11348587  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||  |||||| ||| |||||| ||||||     
T  11348586 atcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgttttccaaccccatgaatcttctccaaaaggcaccag 11348487  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
     ||||||||||||||||||||| |||| ||||||    
T  11348486 accttttcccaagagccccctcttttggttctcc 11348453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 37033253 - 37033486
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  37033253 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaccccaaaaagagaaccaacccatagcctttgatttcactaagg 37033352  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| ||||||| |||||| |||| ||||| |||||||    
T  37033353 atcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaacctcatgaatcttcctcaaaaggcaccaa 37033452  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||||||| |||| ||||||    
T  37033453 cccttttcccaagagccccctcttttggttctcc 37033486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 37168285 - 37168052
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  37168285 ctcatgattttcactctctcaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaatcaacctttagcctttgatttcactaagg 37168186  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| |||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| |||||||||| |||||||    
T  37168185 atcttctcttttagtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 37168086  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||||||| |||| ||||||    
T  37168085 cccttttcccaagagccccctcttttggttctcc 37168052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 37879091 - 37879312
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37879091 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaatccttagcctttgatttcactaagg 37879190  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||| |||||||    
T  37879191 atcttctcttttgatttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaattttccccaaaaggcaccaa 37879290  T
Q  201 cccttttcccaagagccccctc 222  Q
    || ||||| |||||||||||||    
T  37879291 cctttttcacaagagccccctc 37879312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 29136235 - 29136003
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29136235 ctcatgattttcactctcccaaggtgtttacaattgtttcacaactctagaatctaacccccaaaagagaactaacccttagcctttgatttcactaagg 29136136  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||| ||||||||||  |||||| |||||||||| |||||||    
T  29136135 atcttctcttttggtttcacaagactcacccaagttgctcacaaaaaactctccactcatgt-ttttccaaccccatgaatcttccccaaaaggcaccaa 29136037  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||||||||| |||||| |||| ||||||    
T  29136036 cccttttcccaagagtcccctcttttggttctcc 29136003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 13547269 - 13547495
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  13547269 ctcatgattttcactctcccaaggtgtttacaattgtttcccaaatctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagt 13547368  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| ||||| ||||| |    
T  13547369 atcttctcttttggtttcacaagattcacccaagttgctcacaaaagactctccactcatgtgttttccaaccccatgaattttcctcaaaaggcaccga 13547468  T
Q  201 cccttttcccaagagccccctcctttg 227  Q
    |||||||| ||||||| ||||| ||||    
T  13547469 cccttttcacaagagctccctcttttg 13547495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 13549180 - 13549406
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  13549180 ctcatgattttcactctcccaaggtgtttacaattgtttcccaaatctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagt 13549279  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| ||||| ||||| |    
T  13549280 atcttctcttttggtttcacaagattcacccaagttgctcacaaaagactctccactcatgtgttttccaaccccatgaattttcctcaaaaggcaccga 13549379  T
Q  201 cccttttcccaagagccccctcctttg 227  Q
    |||||||| ||||||| ||||| ||||    
T  13549380 cccttttcacaagagctccctcttttg 13549406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 28242370 - 28242144
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||    
T  28242370 attttcactctcccaaggtgtttacaattgttttccaactctagaatctaacccctaaaagagaaccaacccatagcctttgatttcactaaggatattc 28242271  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||    
T  28242270 tcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaaccttatgaatctt-cccaaaaggcaccaacccttt 28242172  T
Q  207 tcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||| |||| ||||||    
T  28242171 tcccaagagccccctcttttggttctcc 28242144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 47115159 - 47114927
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47115159 ctcatgattttcactctcccaagatgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcattaagg 47115060  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||| ||||||  |||||| || ||||||| | |||||    
T  47115059 atcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccattcatgtgtttcccaaccccatgaatctt-cccaaaaggtaccaa 47114961  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||| ||||||||||||||||| |||| ||||||    
T  47114960 ccctgttcccaagagccccctcttttggttctcc 47114927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 34603557 - 34603331
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  34603557 attttcactttcccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaacccttagcctttgatttc-ctaaggatcttc 34603459  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | ||||||||||||||||||||| |||||||||||||||||| | | ||||||||||||||||||||  |||||| |||||||||| |||||||||||||    
T  34603458 tcttttggtttcacaagactcacccaagttgctcacaaaagacttttcactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaacccttt 34603359  T
Q  207 tcccaagagccccctcctttgcttctcc 234  Q
    |||||||||| ||||| |||| ||||||    
T  34603358 tcccaagagctccctcttttggttctcc 34603331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 193599 - 193367
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  193599 ctcatgattttcaccctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 193500  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||| ||| ||| ||||||||| ||||||  |||||| || ||||||| |||||||    
T  193499 atcttctcttttggtttcacaagactcatccaagttgctcacaaaagactcttcacacatgtgtttcccaaccccatgaatctt-cccaaaaggcaccaa 193401  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    || ||| ||||||||||||||| |||| ||||||    
T  193400 ccttttccccaagagccccctcttttggttctcc 193367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 42298155 - 42298388
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  42298155 ctcatgatttttactctcccaaggtgtttacaattgtttcacaactctagaatctaacccccaaaagagaaccaactcttagcctttgatttcacttagg 42298254  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||| ||||||  |||||| ||| |||||| |||||||    
T  42298255 atcttctcttttggtttcacaagactcacccaagttgctcgcaaatgactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaa 42298354  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||| ||||||||||||| |||| ||||||    
T  42298355 cccttttcacaagagccccctcttttggttctcc 42298388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 7 - 220
Target Start/End: Original strand, 7482418 - 7482629
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  7482418 attttcactttcccaaggtgtttacaattgcttcccaactctagaatctaacccccaaaagagaaccaacccttagc-tttgatttc-ctaaggatcttc 7482515  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | |||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| |||||||||| |||||||||||||    
T  7482516 tctttttgtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttt 7482615  T
Q  207 tcccaagagccccc 220  Q
    ||||||||||||||    
T  7482616 tcccaagagccccc 7482629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 19754482 - 19754258
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcact---a 97  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||   |    
T  19754482 ctcatgattttcactctctcaaggtgtttacgaatgtttcccaactctagaatctaacccccaaaagagaaccaaccattatcctttgatttcacttata 19754383  T
Q  98 aggatcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcac 197  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| |||||||||| ||||    
T  19754382 aggattttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcac 19754283  T
Q  198 caacccttttcccaagagccccctc 222  Q
    ||||||||||| |||||||||||||    
T  19754282 caacccttttcacaagagccccctc 19754258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31925887 - 31926099
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31925887 ctcatgattttcactctcccaaggtgtttacaactgcttcc-aactctagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaagg 31925985  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||| ||||| |||||||||||||||||| |||||||||| |||||| |||| |  |||||| |||||||||| |||||||    
T  31925986 atcttctcttttggtttcacaagtctcacccaagttgctcacaaaagattctccactcacgtgtttcccaaacccatgaatcttccccaaaaggcaccaa 31926085  T
Q  201 cccttttcccaaga 214  Q
    |||||||| |||||    
T  31926086 cccttttcacaaga 31926099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 47255520 - 47255747
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47255520 ctcatgattttcactctcccaaggcatttacaattatttcccaactctagaatctaacccccaaaagagaaccaacccttagtctttgatttcactaagg 47255619  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||  |||||| |||||||||| ||||||     
T  47255620 atcttctcttttggtttcacaagactcact-aagttgctcacaaaagactctccaatcatgtgtttcccaacc-catgaatcttccccaaaaggcacca- 47255716  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
       |||||||||||||||| || |||| ||||||    
T  47255717 ---ttttcccaagagccccatcttttggttctcc 47255747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 19752673 - 19752441
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  19752673 ctcatgattttcactctctcaaggtgtttacgattatttcccaactctagaatctaacccccaaaagagaaccaatcattagcctttgatttcactaagg 19752574  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||   ||||||||||||||| | ||||||||||||||||| |||||   |||||| |||||||||| |||||||    
T  19752573 atcttctcttttggtttcacaagactcatctaagttgctcacaaaatactctccactcatgtgtttcccaactcaatgaatcttccccaaaaggcaccaa 19752474  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
     |||||||  ||||||||| || |||| ||||||    
T  19752473 -ccttttcataagagccccatcttttggttctcc 19752441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 38 - 234
Target Start/End: Original strand, 34602557 - 34602752
Alignment:
Q  38 ttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttg 137  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  34602557 ttcccaactctagaatctaacctccaaaagagaaccaacccttagcctttgatttc-ctaaggatcttctcttttggtttcacaagactcacccaagttg 34602655  T
Q  138 ctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||||| | | ||||||||||||||||||||  |||||| |||||||||| |||||||||||||| |||||||| ||||| |||| ||||||    
T  34602656 ctcacaaaagacttttcactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaacccttttaccaagagctccctcttttggttctcc 34602752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 41135800 - 41135605
Alignment:
Q  9 tttcactctcccaaggtgttta-caattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttct 107  Q
    |||| ||| ||||||||||||  ||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||| | || ||||||||    
T  41135800 tttccctcacccaaggtgtttttcaaatgtttctcaactctagaatctaacccccaaaagagaaccaatccttagcctttaatttc-caaatgatcttct 41135702  T
Q  108 attttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaaccct 204  Q
     ||||||||||  ||||||||| |||||| ||||| ||||| |||||  | |||||||| ||||||  |||||| | |||| |||| |||||||||||    
T  41135701 cttttggtttcctaagactcacccaagtttctcac-aaagactctcctttgatgtgtttcccaaccccatgaatctctccctaaaaggcaccaaccct 41135605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 145
Target Start/End: Complemental strand, 22079278 - 22079166
Alignment:
Q  31 caattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcact 130  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||| |||||||||||  ||||||||||     
T  22079278 caattgtttctcaactctagaatctaacccccaaaagagaa-caatccttagcctttgatttca-taagcatcttatattttggtttgccaagactcacc 22079181  T
Q  131 caagttgctcacaaa 145  Q
     ||||||||||||||    
T  22079180 taagttgctcacaaa 22079166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 227
Target Start/End: Original strand, 12318720 - 12318886
Alignment:
Q  59 ccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactc 158  Q
    |||| |||||||||||||||||||||||||||||| | || ||| |||||||||||| || |||||||||| ||||||||||| |||| | |||||  |     
T  12318720 cccccaaagagaaccaacccttagcctttgatttc-caaaagattttctattttggtctcccaagactcacccaagttgctcataaaa-actctcctttg 12318817  T
Q  159 atgtgttttccaaccttatgaa-ttttccccaaaatgcaccaacccttttcccaagagccccctcctttg 227  Q
    ||||||||  ||| | |||||| || ||||||||| |||||||||| | |||||||||||| ||| ||||    
T  12318818 atgtgtttctcaatcctatgaacttctccccaaaaggcaccaaccc-tctcccaagagccctctcatttg 12318886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 6808427 - 6808263
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    |||||||||||||||| |||||| | | |||||| |||||||| ||||||||| | ||| ||||||||||| |  | |||||||| || ||| |||||||    
T  6808427 attttcactctcccaaagtgtttcccaatgtttctcaactctagaatctaacctcgaaa-gagaaccaaccttccgtctttgattaca-taatgatcttc 6808330  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaacc 173  Q
    | |||||||||  ||  |||||| | ||||||||||||| || ||| || |||||||||||||||||    
T  6808329 tcttttggttttccattactcaccctagttgctcacaaatgactcttcattcatgtgttttccaacc 6808263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 232
Target Start/End: Original strand, 16216709 - 16216904
Alignment:
Q  32 aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactc 131  Q
    ||||||||| |||||||| ||||||||||   |||   ||||||| | |||||||||||||| ||||||||||||| ||||   ||  ||| | ||||||    
T  16216709 aattgtttctcaactctagaatctaaccct--aaactaaaccaactcgtagcctttgatttc-ctaaggatcttctcttttaagttttcaaaattcactc 16216805  T
Q  132 aagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattt-tccccaaaatgcaccaacccttttcccaagagccccctcctttgctt 230  Q
    ||||||||||| || || ||||| ||||||||||| |||| |  |||||||| |  ||||||||||||||||||||| | |||||||||||| |||| ||    
T  16216806 aagttgctcac-aatgactctcctctcatgtgtttgccaa-cacatgaatttctatccaaaatgcaccaaccctttt-cgaagagccccctcttttggtt 16216902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 25652070 - 25651931
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaac-ccccaaaagagaaccaacccttagcctttgatttcactaaggat 102  Q
    ||||||||||| | |  ||||||||||||||||||||||||||||| |||||| |  |  |||||||||||||  ||||   ||||||||  ||||||||    
T  25652070 atgattttcacacacttaaggtgtttacaattgtttcccaactctagaatctaccttcataaaagagaaccaattcttaatatttgattt-tctaaggat 25651972  T
Q  103 cttctattttggtttcacaagactcactcaagttgctcaca 143  Q
    ||||  ||||| |||| ||||| |||| |||||||||||||    
T  25651971 cttcacttttgctttcccaagattcacccaagttgctcaca 25651931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 3331505 - 3331428
Alignment:
Q  35 tgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggt 115  Q
    ||||||||||||||| |||| |||||| |||||| ||| |||||||||||||||||||| |||||||||| || |||||||    
T  3331505 tgtttcccaactctagaatccaacccc-aaaaga-aacaaacccttagcctttgatttc-ctaaggatctcctcttttggt 3331428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 928162 - 928202
Alignment:
Q  5 tgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  928162 tgattttcactcacccaaggtgtttacaaatgtttcccaac 928202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 10157571 - 10157490
Alignment:
Q  32 aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggt 115  Q
    ||||||||  ||||| || |||||||||||| |||  |||||||||||||| |||||||||| ||||||||||  |||||||||    
T  10157571 aattgtttttcaactttagaatctaaccccctaaat-gaaccaacccttagtctttgatttc-ctaaggatctcatattttggt 10157490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 15820291 - 15820249
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactc 47  Q
    ||||||||||||| |||||||||||||||| |||||||||||||    
T  15820291 atgattttcactcacccaaggtgtttacaa-tgtttcccaactc 15820249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 197092 - 197132
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  197092 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 197132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 3847305 - 3847345
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  3847305 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 3847345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 4535784 - 4535861
Alignment:
Q  131 caagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaaccctttt 207  Q
    ||||||||||||||| || | |||||||||||||||| |||||  |||||| | | |||||||  |||||||||||||    
T  4535784 caagttgctcacaaacgactatccactcatgtgtttttcaaccccatgaatctattcccaaaagacaccaaccctttt 4535861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 9109680 - 9109733
Alignment:
Q  100 gatcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctc 153  Q
    |||||||||||||| |||| |||||||||  ||| |||||||||||||| ||||    
T  9109680 gatcttctattttgatttcccaagactcatccaaattgctcacaaaagactctc 9109733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 10925207 - 10925167
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  10925207 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 10925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 28265738 - 28265778
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  28265738 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 28265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 50167359 - 50167399
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  50167359 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 50167399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 1833506 - 1833467
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaa 44  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  1833506 atgattttcactcacccaaggtgtttacaa-tgtttcccaa 1833467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 1631912 - 1632138
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1631912 ctcatgattttcactctctcaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 1632011  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| ||||||||||  ||||||    
T  1632012 atcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttccccaaaagacaccaa 1632111  T
Q  201 cccttttcccaagagccccctcctttg 227  Q
    |||||||| ||||||||||||| ||||    
T  1632112 cccttttcacaagagccccctcttttg 1632138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 42288294 - 42288520
Alignment:
Q  5 tgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatct 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  42288294 tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaacccgaaaagagaaccaacccttagcctttgatttcactaaggatct 42288393  T
Q  105 tctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccct 204  Q
    ||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| || ||||||| |||||||||||    
T  42288394 tctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatctt-cccaaaaggcaccaaccct 42288492  T
Q  205 tttcccaagagccccctcctttgcttct 232  Q
    |||||||||||||||||| |||| ||||    
T  42288493 tttcccaagagccccctcttttggttct 42288520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 35447064 - 35447282
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  35447064 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagt 35447163  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| || ||||||| |||||||    
T  35447164 atcttctcttttggttttacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatctttcccaaaaggcaccaa 35447263  T
Q  201 cccttttcccaagagcccc 219  Q
    |||||||| ||||||||||    
T  35447264 cccttttcacaagagcccc 35447282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 45726917 - 45726685
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45726917 ctcatgattttcactctcccaaggtgtttacaattgtttcctaaccctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 45726818  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||| | ||||  |||||| |||||||||| |||||||    
T  45726817 atcttctcttttggtttcacatgactcacccaagttgctcacaaatgactctccactcatgtgtttccaaaccccatgaatcttccccaaaaggcaccaa 45726718  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    ||| |||||||||||| ||||| |||| ||||||    
T  45726717 ccc-tttcccaagagctccctcttttggttctcc 45726685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 24398038 - 24397812
Alignment:
Q  5 tgattttcactctcccaa-ggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||| ||  ||||||||     
T  24398038 tgattttcactcttccaaaggtgtttacaattgtttcccaactctataatctaacccccaa---agaaccaacccttag-ctttgactt-tctaaggata 24397944  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaacc 202  Q
    |||| |||||||||||||||||| || ||| ||| ||||||| || ||||||||||||||||| ||| ||  |||| | | |||| |||| |||||||||    
T  24397943 ttctcttttggtttcacaagactaacccaaattggtcacaaatgactctccactcatgtgtttaccagcccgatgagtctctccctaaaaggcaccaacc 24397844  T
Q  203 cttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||||| |||| ||||||    
T  24397843 cttttcccaagagccccctcttttggttctcc 24397812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 234
Target Start/End: Complemental strand, 17450575 - 17450346
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    ||||||||||||| |||||||||||| ||| ||||| ||||||||| |||| ||||||||| |||||| ||||||||||||||||||||| |||| ||||    
T  17450575 atgattttcactcacccaaggtgtttgcaaatgtttgccaactctagaatccaacccccaatagagaatcaacccttagcctttgatttc-ctaatgatc 17450477  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaaaagaat-ctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacc 202  Q
    |||| ||||||||||||||||||||| |||||| |||||||  || | || | ||||||||||| ||| ||  |||||| || | ||||  |||||||||    
T  17450476 ttctcttttggtttcacaagactcacccaagtttctcacaattgactccttcgctcatgtgtttcccatccccatgaatctttcacaaagggcaccaacc 17450377  T
Q  203 cttttcccaagagccccctcctttgcttctcc 234  Q
    | |||||||||||||||||| |||| ||||||    
T  17450376 c-tttcccaagagccccctcttttggttctcc 17450346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 33648151 - 33647924
Alignment:
Q  7 attttcactctcccaaggtgttt-acaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatctt 105  Q
    ||||||||||||||||| ||||| ||  || | ||||||||||| |||||||||||||||||| ||  |||||||   |||||||||| |||||||||||    
T  33648151 attttcactctcccaagatgttttacggttatgtcccaactctagaatctaacccccaaaagataattaacccttg--ctttgatttccctaaggatctt 33648054  T
Q  106 ctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaaccct 204  Q
    || ||||||||| | ||||||| |  |||| ||| ||||| || |||| |||||| |||||||||||||  ||||| | ||| ||||| |||||||||||    
T  33648053 ctcttttggttttataagactcgcctaagtagctaacaaatgactctctactcatatgttttccaacctcgtgaatctctcctcaaaaggcaccaaccct 33647954  T
Q  205 tttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||||||| |||| |||| ||||||    
T  33647953 tttcccaagagcctcctcttttgattctcc 33647924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 7451170 - 7451055
Alignment:
Q  119 acaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttttcccaagagccc 218  Q
    ||||| || |||||||||||||||||| || ||||||||||||||||||||||||  || ||| ||| ||||||  || ||||||||| || ||||||||    
T  7451170 acaagtcttactcaagttgctcacaaatgactctccactcatgtgttttccaaccccataaatcttctccaaaagtcatcaaccctttaccaaagagccc 7451071  T
Q  219 cctcctttgcttctcc 234  Q
    |||| |||| ||||||    
T  7451070 cctcttttggttctcc 7451055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 145
Target Start/End: Original strand, 30218250 - 30218358
Alignment:
Q  35 tgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaag 134  Q
    ||||||||||||||| |  ||||||||||||||||||||||   ||||| ||||||||| |||||||||  |  |||||||||| |||||||||||||||    
T  30218250 tgtttcccaactctagagcctaacccccaaaagagaaccaatatttagcttttgatttc-ctaaggatccccc-ttttggtttcgcaagactcactcaag 30218347  T
Q  135 ttgctcacaaa 145  Q
    |||||||||||    
T  30218348 ttgctcacaaa 30218358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 43731093 - 43730991
Alignment:
Q  41 ccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctc 140  Q
    ||||||||| ||| ||||||| |||||| |||||||| |||| |||||||||| ||| |||| ||||||||||||||| ||||| |||| ||| ||||||    
T  43731093 ccaactctagaatttaacccc-aaaaga-aaccaacctttagactttgatttc-ctacggatattctattttggtttcccaagattcacccaaattgctc 43730997  T
Q  141 acaaaa 146  Q
    ||||||    
T  43730996 acaaaa 43730991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 42261826 - 42261935
Alignment:
Q  35 tgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaag 134  Q
    ||||||||||||||| | ||||||||| ||||| ||||||| || |||| ||||||||| |||| ||| | || ||||||| ||  ||||||| | ||||    
T  42261826 tgtttcccaactctagattctaacccctaaaag-gaaccaatccgtagcttttgatttc-ctaatgatatactcttttggtctcgtaagactcgcccaag 42261923  T
Q  135 ttgctcacaaaa 146  Q
    ||||||| ||||    
T  42261924 ttgctcataaaa 42261935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 24197867 - 24197829
Alignment:
Q  18 cccaaggtgtttacaattgtttcccaactctataatcta 56  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  24197867 cccaaggtgtttacaattgtttcccagccctataatcta 24197829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 723928 - 723968
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  723928 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 723968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 11049534 - 11049493
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||  |||||||||||||||| |||||||||||    
T  11049534 atgattttcacttacccaaggtgtttacaaatgtttcccaac 11049493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 11067289 - 11067249
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  11067289 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 11067249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 11151775 - 11151815
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  11151775 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 11151815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 11690485 - 11690445
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  11690485 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 11690445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 13121753 - 13121712
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| ||||| |||||||||| |||||||||||    
T  13121753 atgattttcactcacccaatgtgtttacaaatgtttcccaac 13121712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 14634010 - 14634050
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  14634010 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 14634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 24885645 - 24885605
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  24885645 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 24885605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 29867853 - 29867813
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  29867853 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 29867813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 34139955 - 34139995
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  34139955 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 34139995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 36773546 - 36773506
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  36773546 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 36773506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 39284869 - 39284829
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  39284869 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 39284829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 42362336 - 42362296
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  42362336 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 42362296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 7315 - 7083
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7315 ctcatgattttcactctcccaaggtgtttacaattgtttcc-agctctagaatctaacccccaaaagagaaccaacccttagcctttgattttactaagg 7217  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||||| |||||||    
T  7216 atcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgttttccaaccccatgaatcttccccaaaaggcaccaa 7117  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||| ||||||||||||| |||| ||||||    
T  7116 cccttttcacaagagccccctcttttggttctcc 7083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 6e-89; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 42435171 - 42435404
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42435171 ctcatgattttcactctcccaaagtgtttacaattgtttaccaactctagaatctaaccctcaaaagagaaccaacccttagcctttgatttcactaagg 42435270  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||| ||||||  |||||| ||||||||||  ||||||    
T  42435271 atcttctcttttggtttcacaagactcactcaagttgctcacaaaagactctccattcatatgtttcccaaccccatgaatcttccccaaaagtcaccaa 42435370  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    || ||||||||||||||||||| |||| ||||||    
T  42435371 cctttttcccaagagccccctcttttggttctcc 42435404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 40221733 - 40221513
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40221733 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacctttagcctttgatttcactaagg 40221634  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||| |||||||||||  ||||||||||||||||| ||||||||||||||||| ||||||  |||||| |||||||||| |||| ||    
T  40221633 atcttctcttttggttttacaagactcacctaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcactaa 40221534  T
Q  201 cccttttcccaagagccccct 221  Q
    ||| |||||||||||||||||    
T  40221533 cccctttcccaagagccccct 40221513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 11383974 - 11383741
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11383974 ctcatgattttcactctcccaaggtgtttacaattatttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 11383875  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||| |||| ||| ||||||  |||||| |||| ||||| |||||||    
T  11383874 atcttctcttttggtttcacaagactcacccaagttgctcacaaaagactttccacttatgtatttcccaaccccatgaatcttcctcaaaaggcaccaa 11383775  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||| ||| ||||||||| |||| ||||||    
T  11383774 cccttttcacaatagccccctcttttggttctcc 11383741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 40328766 - 40328534
Alignment:
Q  2 tcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagga 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| ||    
T  40328766 tcatgattttcactctcccaagatgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaactcatagcctttgatttcactaaaga 40328667  T
Q  102 tcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaac 201  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||| ||| ||  |||||| ||||| |||| ||||||||    
T  40328666 tcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctacactcatgtgtttcccatccccatgaatcttccctaaaaggcaccaac 40328567  T
Q  202 ccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||||||| ||||||| |||| ||||||    
T  40328566 ccttttcccaagaaccccctcttttggttctcc 40328534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 44353777 - 44353559
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  44353777 atgatttttactcacccaatgtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatc 44353678  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccc 203  Q
    || | ||||||||||||||||||||| ||||||||||||  | || ||||||||||||||||||||||||  |||||| ||| |||||| ||||||||||    
T  44353677 ttttcttttggtttcacaagactcacccaagttgctcaccgatgactctccactcatgtgttttccaaccccatgaatcttctccaaaaggcaccaaccc 44353578  T
Q  204 ttttcccaagagccccctc 222  Q
    | ||| |||||||||||||    
T  44353577 tcttcacaagagccccctc 44353559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 4283512 - 4283321
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4283512 ctcatgattttcactctcctaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 4283413  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaa 192  Q
    ||||||| ||||||||||||||||||||  |||||| ||||||||||| | ||||||||||||||| ||||||  |||||| || |||||||    
T  4283412 atcttctcttttggtttcacaagactcaaccaagtttctcacaaaagactttccactcatgtgtttcccaaccccatgaatctttcccaaaa 4283321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18655388 - 18655246
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  18655388 ctcatgattttcactctcccaaggtgtttacaattgtttcctaagtctagaatctaacccc-aaaagagtatcaacccttagcctttgatttcactaagg 18655290  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaa 144  Q
    ||||||| ||||| |||||||||||||||  |||||||||||||    
T  18655289 atcttctcttttgatttcacaagactcaccgaagttgctcacaa 18655246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 22976389 - 22976289
Alignment:
Q  133 agttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttttcccaagagccccctcctttgcttct 232  Q
    |||||||||||| ||| ||| ||||||||||||||| ||||  |||||| |||||||||| |||||||||||||| ||||||||| |||| |||| ||||    
T  22976389 agttgctcacaatagactcttcactcatgtgttttc-aaccccatgaatcttccccaaaaggcaccaaccctttttccaagagcctcctcttttggttct 22976291  T
Q  233 cc 234  Q
    ||    
T  22976290 cc 22976289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 40585656 - 40585569
Alignment:
Q  57 acccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaa 145  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| |  ||| |||||| ||| |||||||||||    
T  40585656 acccccaaaagagaaccaacccttagtctttgatttc-ctaaggatcttctcttttggtctaccaatactcacccaaattgctcacaaa 40585569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10930379 - 10930424
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaact 46  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||    
T  10930379 ctcatgattttcactctcccaaaatgtttacaattgtttcccaact 10930424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 33655516 - 33655628
Alignment:
Q  32 aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactc 131  Q
    |||| ||| ||||||||| ||| ||||||   |||||||||||||||||| ||||||||||  ||||||||||||| ||||| | ||  |||| |||| |    
T  33655516 aattattttccaactctaaaatttaacccttgaaagagaaccaacccttaacctttgattt-tctaaggatcttctcttttgttctcctaagattcaccc 33655614  T
Q  132 aagttgctcacaaa 145  Q
    || |||||||||||    
T  33655615 aaattgctcacaaa 33655628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 18141805 - 18141764
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  18141805 atgattttcactcgcccaaggtgtttacaaatgtttcccaac 18141764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 10020398 - 10020321
Alignment:
Q  35 tgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggt 115  Q
    ||||||||||||||| |||| |||||  |||||| ||| |||||||||||||||||||| |||||||||| || |||||||    
T  10020398 tgtttcccaactctagaatccaaccca-aaaaga-aacaaacccttagcctttgatttc-ctaaggatctcctcttttggt 10020321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 8965875 - 8965914
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttccca 43  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  8965875 atgattttcactcacccaaggtgtttacaaatgtttccca 8965914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 10240113 - 10240061
Alignment:
Q  31 caattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcct 85  Q
    |||||||||||||| |||| |||||||||||  ||||||||||||| ||||||||    
T  10240113 caattgtttcccaaatctagaatctaacccc--aaagagaaccaactcttagcct 10240061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 4731642 - 4731602
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  4731642 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 4731602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 15212770 - 15212730
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  15212770 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 15212730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 30291590 - 30291549
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    |||||||||| || |||||||||||||||| |||||||||||    
T  30291590 atgattttcaatcacccaaggtgtttacaaatgtttcccaac 30291549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 41365031 - 41365071
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  41365031 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 41365071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 43036407 - 43036367
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  43036407 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 43036367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 3817647 - 3817729
Alignment:
Q  135 ttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaacccttttcccaagagccc 218  Q
    ||||||||||| |||||| | || |||| ||||||||||  |||||| |||| |||||| |||||||||||||| ||||||||||    
T  3817647 ttgctcacaaa-gaatcttctcttatgtattttccaaccccatgaatctttctccaaaaggcaccaaccctttt-ccaagagccc 3817729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 10101351 - 10101475
Alignment:
Q  19 ccaaggtgtttacaa-ttgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggttt 117  Q
    ||||||||||||||| || ||||| ||| ||| ||||||||||| ||| |   |||||||||||| ||||||||| | ||||||||| || ||||| | |    
T  10101351 ccaaggtgtttacaaattatttcctaacactagaatctaaccccaaaacgt--accaacccttagactttgattt-aataaggatctcctcttttgatct 10101447  T
Q  118 cacaagactcactcaagttgctcacaaa 145  Q
    |  |||| |||  |||||||||||||||    
T  10101448 cctaagattcatccaagttgctcacaaa 10101475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 41366798 - 41366837
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaa 44  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  41366798 atgattttcactcacccaaggtgtttacaa-tgtttcccaa 41366837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 50674026 - 50674259
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50674026 ctcatgattttcactctcccaaggtgtttacaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 50674125  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| || |||| || |||||||    
T  50674126 atcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatctttcccataaggcaccaa 50674225  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||   ||||||||||| |||| ||||||    
T  50674226 cccttttcattagagccccctcttttggttctcc 50674259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 54883008 - 54882775
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54883008 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 54882909  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| |||||||||||| |||||||| |||||| ||||||||||| ||| ||||||||||||| ||||||  |||||| ||| |||||| |||||||    
T  54882908 atcttctcttttggtttcacgagactcacccaagtttctcacaaaagactctacactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaa 54882809  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||  |||||||||||| |||| ||||||    
T  54882808 cccttttcataagagccccctcttttggttctcc 54882775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 4 - 234
Target Start/End: Original strand, 55085548 - 55085778
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  55085548 atgattttcactcacccaaggtgtttacaattgtttccgaactctagaatctaacccccaaaggagaatcaacccttagcctttgatttcactaaggatc 55085647  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccc 203  Q
    |||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| ||||||  |||||| |||||||||| ||||||||||    
T  55085648 ttctcttttggtttcacaagactcacacaagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaaccc 55085747  T
Q  204 ttttcccaagagccccctcctttgcttctcc 234  Q
    ||| ||||||||||||||| |||| ||||||    
T  55085748 tttccccaagagccccctcttttggttctcc 55085778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 50262878 - 50263111
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50262878 ctcatgattttcactctcccaaggtatttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaagg 50262977  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
     |||||| |||||||||||||||| ||||  | ||||||||||||||| ||||||||||||||||| ||||||  |||||| |||||||||| |||||||    
T  50262978 gtcttctcttttggtttcacaagagtcaccgaggttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 50263077  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||| |||||||||||||| |||| ||||||    
T  50263078 ccctttttccaagagccccctcttttggttctcc 50263111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 8665389 - 8665162
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||| | || ||||||||||||||||||||||||    
T  8665389 attttcactcttccaaggtgtttacaattgtttcccaactccagaatctaacccccaaaagaaaaccaacacataacctttgatttcactaaggatcttc 8665290  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||  |||||| |||||||||| |||||||||||||    
T  8665289 tcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcctgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttt 8665190  T
Q  207 tcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||| |||| ||||||    
T  8665189 tcccaagagccccctcttttggttctcc 8665162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 12073380 - 12073162
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12073380 ctcatgattttcacactcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcatttgatttcactaagg 12073281  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||  |||||| || ||||||| |||||||    
T  12073280 atcttctcttttggtttcataagactcacccaagttgctcacaaaagactcttcactcatgtgttttccaaccccatgaatctt-cccaaaaggcaccaa 12073182  T
Q  201 ccc-ttttcccaagagcccc 219  Q
    ||| ||||||||||||||||    
T  12073181 ccctttttcccaagagcccc 12073162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 6655944 - 6655711
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||||||| ||||| |    
T  6655944 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaccccaaaaagagaaacaacctttagcctttgattttactaatg 6655845  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||| ||||||  |||||| ||| |||||| |||||||    
T  6655844 atcttctcttttggtttcacaagactcacccaagttgctcagaaatgactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaa 6655745  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||| ||||||||||||||| |||| ||||||    
T  6655744 ccctttccccaagagccccctcttttggttctcc 6655711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 379360 - 379134
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  379360 attttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccacaaaagagaaccaacccttagcctttgatttc-ctaaggatcttc 379262  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | ||||| ||||||||||||||| ||||||||||||||| || ||||||||||||||||| |||  || |||||| |||||||||| ||||| |||||||    
T  379261 tcttttgatttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccattctcatgaatcttccccaaaaggcaccgacccttt 379162  T
Q  207 tcccaagagccccctcctttgcttctcc 234  Q
    || ||||||||||||| |||| ||||||    
T  379161 tcacaagagccccctcttttggttctcc 379134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 41964396 - 41964172
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41964396 attttcactttcccaaggtgtttacaattgtttcccaactctagaatctaacccc-aaaagagaaccaacccttagcctttgatttcactaaggatcttc 41964298  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | ||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||  |||||| || |||||||   || ||||||||    
T  41964297 tcttttggtttcacaagactcacccaagttgctcacaaaagactctctactcatgtgtttcccaaccccatgaatctttcccaaaa--gactaacccttt 41964200  T
Q  207 tcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||| |||| ||||||    
T  41964199 tcccaagagccccctcttttggttctcc 41964172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 8648120 - 8647893
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||||| |||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||| | || | ||||||||||||||||||||||    
T  8648120 attttcactcttccaaggtgtttacagttgtttcctaactccagaatctaacccccaaaagagaaccaacacataacatttgatttcactaaggatcttc 8648021  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | ||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||  |||||| |||||||||| |||||||||||||    
T  8648020 tcttttgatttcacaagactcacccaagttgctcacaaaagactctccactcctgtgtttcccaaccccatgaatcttccccaaaaggcaccaacccttt 8647921  T
Q  207 tcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||| |||| ||||||    
T  8647920 tcccaagagccccctcttttggttctcc 8647893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 8 - 234
Target Start/End: Complemental strand, 35662421 - 35662197
Alignment:
Q  8 ttttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttct 107  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  35662421 ttttcacactctcaaggtgtttacaattgtttcccaactctagaatctaacacccaaaagagaaccaacccttagc-tttgatttc-ctaaggatcttct 35662324  T
Q  108 attttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccctttt 207  Q
     ||||||||||||||||||||| |||||||||||||||  | |||||| |||||||||||||||||  |||||| |||||||||| ||||||||||||||    
T  35662323 cttttggtttcacaagactcacccaagttgctcacaaagaactctccattcatgtgttttccaaccccatgaatcttccccaaaaggcaccaaccctttt 35662224  T
Q  208 cccaagagccccctcctttgcttctcc 234  Q
    || |||||||||||| |||| ||||||    
T  35662223 cctaagagccccctcttttggttctcc 35662197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 233
Target Start/End: Complemental strand, 46703481 - 46703257
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||    
T  46703481 attttcactctcccaaggtgtttacaattgtttcccaacactataatctaacccccaaaagagaaccaacttttagcctttgatttc-ctaaggattttc 46703383  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | ||||||||||||||||||||| ||||||||| |||||||| |||||| |||||| ||| ||| ||  |||||| |||||||||| |||||||||||||    
T  46703382 tcttttggtttcacaagactcacccaagttgctgacaaaagactctccattcatgt-tttcccatccccatgaatcttccccaaaaggcaccaacccttt 46703284  T
Q  207 tcccaagagccccctcctttgcttctc 233  Q
    |||||||||||||||| |||| |||||    
T  46703283 tcccaagagccccctcttttgattctc 46703257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 32 - 234
Target Start/End: Complemental strand, 26364222 - 26364020
Alignment:
Q  32 aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactc 131  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  26364222 aattgtttcccaactctaaaatctaaccaccaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactcaccc 26364123  T
Q  132 aagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttttcccaagagccccctcctttgcttc 231  Q
    |||||||||||||| || ||||||||||||||||| ||||||  |||||| ||| |||||| || |||||||||||| ||||||||||||| |||| |||    
T  26364122 aagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggccccaacccttttcacaagagccccctcttttggttc 26364023  T
Q  232 tcc 234  Q
    |||    
T  26364022 tcc 26364020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 2209701 - 2209463
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2209701 ctcatgattttcactctcccaaggtgtttacaattatttcccaactctagaatctaacccccaaaagagaaccaacccatagcctttgatttcactaagg 2209602  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaa-----agaatctccactcatgtgttttccaaccttatgaattttccccaaaatgc 195  Q
    ||||||| ||||||||||||||||||| || |       | || |      || ||||||||||||||||| ||||||  |||||| |||||||||| ||    
T  2209601 atcttctcttttggtttcacaagactcgctgagaaccaacccatagcctttgactctccactcatgtgtttcccaaccccatgaatcttccccaaaaggc 2209502  T
Q  196 accaacccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||||| |||||| |||| ||||||    
T  2209501 accaacccttttcccaagagtcccctcgtttggttctcc 2209463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 33989831 - 33989631
Alignment:
Q  19 ccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttc 118  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||||| || ||||||||||||||| | ||||||||||||| ||||||||||    
T  33989831 ccaaggtgtttacagttgtttcccaactctagaatctaacctccaaaagagaacaaatccttagcctttgattac-ctaaggatcttctcttttggtttc 33989733  T
Q  119 acaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttttcccaagagccc 218  Q
    | ||||||||| ||||||||||||||| || ||||||||||||||||| |||| |  |||||| |  ||||||| ||||||| |||| ||||||||||||    
T  33989732 aaaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaatcccatgaatctctcccaaaaggcaccaa-ccttctcccaagagccc 33989634  T
Q  219 cct 221  Q
    |||    
T  33989633 cct 33989631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 27417145 - 27417364
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||    ||||||||||||||||  ||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27417145 ctcatgattttcactctccc----tgtttacaattgtttcaaaactcaagaatctaacccccaaaagagaaccaacccttagtctttgatttcactaagg 27417240  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||| ||||||||||| ||          |||||| ||||||||||||||||| ||||||  |||||| ||||||||||  ||||||    
T  27417241 atcttcttttttggttttacaagactcaccca----------aaaagactctccactcatgtgtttcccaaccccatgaatcttccccaaaagacaccaa 27417330  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    ||| ||||||||||||||| || |||| ||||||    
T  27417331 cccctttcccaagagccccttcttttggttctcc 27417364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 12119521 - 12119314
Alignment:
Q  5 tgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatct 104  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||  |||||||||    
T  12119521 tgattttcactctcccaaggtatttacaattgtttcccaactctataatctaacccccaaaagagaaccaaccctta-acttcgatttc-ttaaggatct 12119424  T
Q  105 tctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccct 204  Q
    ||| ||||||||||||||||| ||| ||| ||||||||||| || || ||||| ||||||||  |||||  |||||| ||||| |||  | ||||||||     
T  12119423 tctcttttggtttcacaagacacacccaaattgctcacaaatgattcaccactaatgtgtttcgcaaccccatgaatcttcccaaaagggaaccaaccc- 12119325  T
Q  205 tttcccaagag 215  Q
    |||||||||||    
T  12119324 tttcccaagag 12119314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 40630878 - 40630739
Alignment:
Q  95 ctaaggatcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatg 194  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||||| |||||||||| |    
T  40630878 ctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatcttccccaaaagg 40630779  T
Q  195 caccaacccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||| ||| ||| ||||| |||| ||||||    
T  40630778 caccaacccttttcacaaaagctccctcttttggttctcc 40630739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 40632433 - 40632334
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  40632433 ctcatgattttcactctcccaaggtgtttacaattgtttctcaactctagaatctaacccccaaaagagaaccaacccttaacatttgatttcactaagg 40632334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 26699629 - 26699786
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||||||| || ||| ||||    
T  26699629 atgattttcactcacccaaagtgtttacaattgtttcccaactttataatctaacccctaaaagagaaccaacctttaacctttgattaca-taaagatc 26699727  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgt 162  Q
     ||| |||| ||||   ||||||||    ||||| |||| || ||||||||||||||||    
T  26699728 atctcttttagttttctaagactcatctgagttgttcactaatgaatctccactcatgt 26699786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 41961368 - 41961264
Alignment:
Q  31 caattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcact 130  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||||| |||| ||||||| || ||||||||||     
T  41961368 caattgtttcccaactctagaatctaaccctcaaaagagaaccaacccttagcttttgatttc-ctaaggatattcttttttggtctcccaagactcacc 41961270  T
Q  131 caagtt 136  Q
    ||||||    
T  41961269 caagtt 41961264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 234
Target Start/End: Complemental strand, 33089841 - 33089654
Alignment:
Q  35 tgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaag 134  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||           || | ||||    
T  33089841 tgtttcccaactctataatctaacctccaaaagagaaccaacctttagcctttgattt-tctaaggatcttctcttttgg-----------tctcccaag 33089754  T
Q  135 ttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcaccaacccttttcccaagagccccctcctttgcttctc 233  Q
    ||||||||||| || |||||||||||||||||| | |||  |||||| | || ||||||  ||||||||| | |||||||||||||||| |||| |||||    
T  33089753 ttgctcacaaatgactctccactcatgtgtttttcgaccccatgaatctctctccaaaagacaccaaccc-tctcccaagagccccctcttttgattctc 33089655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 208
Target Start/End: Complemental strand, 34112555 - 34112392
Alignment:
Q  45 ctctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaa 144  Q
    |||||||||||| |  ||||||||||||||| | ||||||||||||||| ||||||||||||  ||||| |||  ||||| |||  |||||||||||||     
T  34112555 ctctataatctaccttccaaaagagaaccaaactttagcctttgatttc-ctaaggatcttcagttttgtttttccaagattcatccaagttgctcacag 34112457  T
Q  145 aagaatctccactcatgtgttttccaaccttatgaa-ttttccccaaaatgcaccaacccttttc 208  Q
    | || ||||||||||||||||||||||||   ||||  | ||||||||| |||||||||||||||    
T  34112456 atgactctccactcatgtgttttccaaccccgtgaacctctccccaaaaggcaccaacccttttc 34112392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 234
Target Start/End: Original strand, 46569816 - 46569959
Alignment:
Q  91 ttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaa 190  Q
    |||| |||||| ||||| ||||||||||| |||| ||||  |||||| |||||||||| | ||||||||| ||||| ||||||  |||||| || |||||    
T  46569816 ttcaataaggaccttctcttttggtttcataagattcacctaagttgttcacaaaagactttccactcatttgtttcccaaccccatgaatctttcccaa 46569915  T
Q  191 aatgcaccaacccttttcccaagagccccctcctttgcttctcc 234  Q
    || ||||||| ||||||| ||||||||||||| |||| ||||||    
T  46569916 aaggcaccaatccttttcacaagagccccctcttttggttctcc 46569959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 41639410 - 41639345
Alignment:
Q  5 tgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagaga 70  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41639410 tgattttcactctcctaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagaga 41639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 35369625 - 35369763
Alignment:
Q  4 atgattttcactctcccaaggtgtttac-aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggat 102  Q
    |||||||||||||| | ||||||||| | ||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||   | || |||    
T  35369625 atgattttcactctac-aaggtgtttcccaattgtttcccaattctataatccaacccc-aaaagagaaccaacccttagcctttgatt--cccaaagat 35369720  T
Q  103 cttctattttggtttcacaagactcactcaagttgctcacaaa 145  Q
    ||||||||||| | ||   |||||||| ||||||||| |||||    
T  35369721 cttctattttgctatccatagactcacccaagttgcttacaaa 35369763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 3786034 - 3785934
Alignment:
Q  43 aactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcac 142  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||| |||| ||||||| || |||||||| | ||| ||||||||    
T  3786034 aactctagaatcta-cccccaaaagagaaccaactcttagcctttgatttc-ctaaggatattctcttttggtctcccaagactcgcacaatttgctcac 3785937  T
Q  143 aaa 145  Q
    |||    
T  3785936 aaa 3785934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 145
Target Start/End: Original strand, 35370553 - 35370661
Alignment:
Q  35 tgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaag 134  Q
    |||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||||| | || |||||||||||||||| ||   |||||||| ||||    
T  35370553 tgtttcccaattctataatctaactcc-aaaagagaaccaaccattagcctttgatttc-ccaaagatcttctattttggtatccatagactcacccaag 35370650  T
Q  135 ttgctcacaaa 145  Q
    ||||| |||||    
T  35370651 ttgcttacaaa 35370661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 22882964 - 22883077
Alignment:
Q  32 aattgtttcccaactctataatctaacccc-caaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcact 130  Q
    |||||||| |||| |||| ||||||||||| |||||||||||||||| ||| ||||||||||  ||||||||||||| ||||||| ||  ||||||| |     
T  22882964 aattgttttccaattctagaatctaaccccccaaaagagaaccaaccattatcctttgattt-tctaaggatcttctcttttggtctcctaagactcgcc 22883062  T
Q  131 caagttgctcacaaa 145  Q
    ||| |||||||||||    
T  22883063 caaattgctcacaaa 22883077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 22934628 - 22934741
Alignment:
Q  32 aattgtttcccaactctataatctaacccc-caaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcact 130  Q
    |||||||| |||| |||| ||||||||||| |||||||||||||||| ||| ||||||||||  ||||||||||||| ||||||| ||  ||||||| |     
T  22934628 aattgttttccaattctagaatctaaccccccaaaagagaaccaaccattatcctttgattt-tctaaggatcttctcttttggtctcctaagactcgcc 22934726  T
Q  131 caagttgctcacaaa 145  Q
    ||| |||||||||||    
T  22934727 caaattgctcacaaa 22934741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21688236 - 21688188
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactcta 49  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  21688236 ctcatgattttcactcccccaaggtgtttagaattgtttcccaactcta 21688188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 24969096 - 24969055
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  24969096 atgattttcactcacccaaggtgtttacaaatgtttcccaac 24969055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 32091435 - 32091324
Alignment:
Q  31 caattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcact 130  Q
    ||||||||||| |||| || ||||| ||||| |||| ||||||||| ||| |||||||||||| |||||||||||||  | |||| || ||| ||| ||     
T  32091435 caattgtttccaaactttagaatcttaccccaaaaa-agaaccaacactttgcctttgatttc-ctaaggatcttctcctctggtctcccaaaacttacc 32091338  T
Q  131 caagttgctcacaa 144  Q
    ||||||| ||||||    
T  32091337 caagttgttcacaa 32091324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 52467538 - 52467579
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  52467538 atgattttcactcacccaaggtgtttacaaatgtttcccaac 52467579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 5208026 - 5208066
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaa 44  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  5208026 atgattttcactcacccaaggtgtttacaaatgtttcccaa 5208066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 41639247 - 41639207
Alignment:
Q  5 tgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  41639247 tgattttcactctcctaaggtgtttacaattgttacccaac 41639207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 4587942 - 4587902
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  4587942 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 4587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 5429663 - 5429623
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  5429663 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 5429623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 5871804 - 5871764
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  5871804 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 5871764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 13009615 - 13009655
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  13009615 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 13009655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 26175820 - 26175860
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  26175820 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 26175860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 48143026 - 48142986
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  48143026 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 48142986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 52065581 - 52065540
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||    
T  52065581 atgattttcactcacccaaggggttcacaattgtttcccaac 52065540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 52082841 - 52082881
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  52082841 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 52082881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 52095546 - 52095586
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  52095546 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 52095586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 6719531 - 6719479
Alignment:
Q  40 cccaactctataatctaacccccaaaagagaaccaacccttagcctttgattt 92  Q
    |||||||||||| ||||||||||||||  ||| |||||||||  |||||||||    
T  6719531 cccaactctatattctaacccccaaaaaggaatcaacccttaagctttgattt 6719479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 12745620 - 12745659
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaa 44  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  12745620 atgattttcactcacccaaggtgtttac-attgtttcccaa 12745659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 37229907 - 37229947
Alignment:
Q  5 tgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    |||||||||||| |||||||||||||||| ||||| |||||    
T  37229907 tgattttcactcacccaaggtgtttacaaatgttttccaac 37229947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 603260 - 603493
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  603260 ctcatgattttcactatcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaagg 603359  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||| ||||||  |||||| ||| |||||| |||||||    
T  603360 atcttctcttttggtttcacaagactcacccaagttgctcacaaaggacactccactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaa 603459  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||| | ||||||||||||| |||| ||||||    
T  603460 ccctttcctcaagagccccctcttttggttctcc 603493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 5043615 - 5043383
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  5043615 ctcatgattttcactctcacaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaactcttagcctttgattccactaagg 5043516  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||  |||||| || ||||||| |||||||    
T  5043515 atcttctcttttggtttcacaagactcacccaaattgctcacaaaagactctccactcatgtgtttcccaaccccatgaatctt-cccaaaaggcaccaa 5043417  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||||||||||||||| ||| |||| ||||||    
T  5043416 cccttttcccaagagccctctcttttggttctcc 5043383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 21593652 - 21593421
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  21593652 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagc-tttgatttc-ctaagg 21593555  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||  |||||| ||| |||||| |||||||    
T  21593554 atcttctcttttggtttcacaagactcacccaagttgctcaaaaatgactctccactcatgtgttttccaaccccatgaatcttctccaaaaggcaccaa 21593455  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    |||||| ||||||||||||||| |||| ||||||    
T  21593454 ccctttccccaagagccccctcttttggttctcc 21593421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 4 - 234
Target Start/End: Original strand, 2973122 - 2973352
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  2973122 atgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaatccctaaaagagaaccaacccttagcctttgatttcactaaggatc 2973221  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccc 203  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| || ||| || |||||||||| ||||||  |||||| ||||| |||| ||||||||||    
T  2973222 ttctcttttggtttcacaagactcacccaagttgttcacaaatgactctgcattcatgtgtttcccaaccccatgaatcttcccaaaaaagcaccaaccc 2973321  T
Q  204 ttttcccaagagccccctcctttgcttctcc 234  Q
    ||||| ||||||||||||| |||| ||||||    
T  2973322 ttttcacaagagccccctcttttggttctcc 2973352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 3808893 - 3809107
Alignment:
Q  5 tgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatct 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  3808893 tgattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaa-agaaccaacccttagcctttgatttcactaaggattt 3808991  T
Q  105 tctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccct 204  Q
    ||| ||||||||| ||||||||||| ||||||||||||||| || ||||||||||||||||| ||||||  |||||| ||| |||||| | |||||||||    
T  3808992 tctcttttggttttacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggaaccaaccct 3809091  T
Q  205 tttcccaagagccccc 220  Q
    |||| |||||||||||    
T  3809092 tttcacaagagccccc 3809107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 17762971 - 17762742
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17762971 attttcactctctcaaagtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 17762872  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattt--tccccaaaatgcaccaaccct 204  Q
    | |||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||||  |||||| |   |||||||| ||||||| |||    
T  17762871 tctttttgtttcacaagactcacccaagttgctcccaaaagactctccactcatgtgtttcccaaccccatgaatctaacccccaaaaggcaccaaacct 17762772  T
Q  205 tttcccaagagccccctcctttgcttctcc 234  Q
    |||| ||||||||||||| |||| ||||||    
T  17762771 tttcacaagagccccctcttttggttctcc 17762742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 26830304 - 26830537
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  26830304 ctcatgattttcactctcccaaggtgtttacaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaga 26830403  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||| || ||| | ||||| ||||| ||||||  |||||| ||| |||||| |||||||    
T  26830404 atcttctcttttggtttcacaagactcgcccaagttgctcacaaatgactctgcgctcatctgtttcccaaccccatgaatcttctccaaaaggcaccaa 26830503  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    || |||||||||||| | |||| |||| ||||||    
T  26830504 cctttttcccaagagactcctcttttggttctcc 26830537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 234
Target Start/End: Original strand, 22425014 - 22425240
Alignment:
Q  7 attttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttc 106  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |||    
T  22425014 attttcactctcccaaagtgtttacaattgtttcccaactctataatctaacccc-aaaagagaaccaacccttagc-tttgatttc-ctaaggatattc 22425110  T
Q  107 tattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttt 206  Q
    | |||||||||||||||||| ||  |||||||||  ||| || ||| ||| |||||||||  |||||  |||||| |||||||||||||||||||||||     
T  22425111 tcttttggtttcacaagactaaccgaagttgctcttaaatgactcttcacccatgtgtttcacaaccccatgaatcttccccaaaatgcaccaaccctta 22425210  T
Q  207 tcccaagag--ccccctcctttgcttctcc 234  Q
    |||||||||  ||||||| |||| ||||||    
T  22425211 tcccaagaggcccccctcttttggttctcc 22425240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 17757995 - 17757837
Alignment:
Q  78 cttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttat 177  Q
    ||||||||||||||||||| | |||||||| |||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  ||    
T  17757995 cttagcctttgatttcactgatgatcttctctttttgtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccat 17757896  T
Q  178 gaattt--tccccaaaatgcaccaacccttttcccaagagccccctcctttgcttctcc 234  Q
    |||| |   |||||||||||||||||||||||| ||||||||||||  |||| ||||||    
T  17757895 gaatctaacccccaaaatgcaccaacccttttcacaagagccccctattttggttctcc 17757837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 5740978 - 5741117
Alignment:
Q  9 tttcactctcccaaggtgtttac-aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttct 107  Q
    |||||||| || ||||||||| | |||||||| |||||| || |||||||||||| |||   ||||||||||||||||||||||| |||||||||||||     
T  5740978 tttcactcaccgaaggtgttttccaattgttttccaactttagaatctaaccccccaaaagtaaccaacccttagcctttgattt-actaaggatcttca 5741076  T
Q  108 attttggtttcacaagactcactcaagttgctcacaaaaga 148  Q
     |||| ||||| ||||| |||| ||| ||||||||||||||    
T  5741077 ctttttgtttctcaagattcacccaaattgctcacaaaaga 5741117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 25073548 - 25073463
Alignment:
Q  9 tttcactctcccaaggtgtttac-aattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttc 93  Q
    |||||||| |||||| ||||| | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||    
T  25073548 tttcactcacccaagatgtttcccaattgtttcccaactctagaatctaacccccaaaagagaatcaacccttagcctttaatttc 25073463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 227
Target Start/End: Complemental strand, 26800634 - 26800533
Alignment:
Q  125 ctcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaacccttttcccaagagccccctcct 224  Q
    ||||| |||||||||| ||| ||| ||||||||||||||||| ||| ||  |||||| |||||||||| ||||||||| ||||||||||||||||||| |    
T  26800634 ctcacccaagttgctctcaatagactctccactcatgtgtttcccatccc-atgaatcttccccaaaaggcaccaacctttttcccaagagccccctctt 26800536  T
Q  225 ttg 227  Q
    |||    
T  26800535 ttg 26800533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 11660574 - 11660507
Alignment:
Q  21 aaggtgtttacaa-ttgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttga 89  Q
    ||||||||||||| |||||||| ||||||| |||||||||||  |||  |||||||||||||||||||||    
T  11660574 aaggtgtttacaaattgtttccgaactctagaatctaacccc--aaaatgaaccaacccttagcctttga 11660507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 4045407 - 4045364
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactc 47  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||    
T  4045407 atgattttcactcaccctaggtgtttacaaatgtttcccaactc 4045364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 9183215 - 9183255
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  9183215 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 9183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 28137592 - 28137632
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaac 45  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  28137592 atgattttcactcacccaaggtgtttacaa-tgtttcccaac 28137632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 80463 - 80696
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  80463 ctcatgattttcactctcccaaggtgttcacaattgtttcctaactctagaatctaacccccaaaatagaaccaacccttagcctttgatttcactaagg 80562  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaa 200  Q
    |||| || |||| ||||| |||||||||| |||||||||||||||||| ||||| ||||||||||| ||||||  |||||| |||||||||| |||||||    
T  80563 atctactcttttagtttcccaagactcacccaagttgctcacaaaagactctccgctcatgtgtttcccaaccccatgaatcttccccaaaaggcaccaa 80662  T
Q  201 cccttttcccaagagccccctcctttgcttctcc 234  Q
    ||||||||  |||||||||||| |||| ||||||    
T  80663 cccttttcataagagccccctcttttggttctcc 80696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 18183 - 18402
Alignment:
Q  1 ctcatgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaagg 100  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||    
T  18183 ctcatgattttcactctcccaaagtgtttacaattgtttcc-aactctataatctaacccc-aaaagagaaccaactcttagtctttgatttcactaagg 18280  T
Q  101 atcttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaat-tttccccaaaatgcacca 199  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||  | |||||||||||||||||| |||||| |||||| || |||||||| ||||||    
T  18281 atcttctcttttggttttacaagactcactcaagttgctcacaaataactctccactcatgtgtttt-caacctcatgaatcttcccccaaaaggcacca 18379  T
Q  200 acccttttcccaagagccccctc 222  Q
    ||||||||| |||||||||||||    
T  18380 acccttttcacaagagccccctc 18402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 234
Target Start/End: Complemental strand, 11541 - 11313
Alignment:
Q  4 atgattttcactctcccaaggtgtttacaattgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatc 103  Q
    ||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||| |||||||||||||| ||||| ||||    
T  11541 atgattttcactcacc-aaggtgtttacaat-gtttcccaactctagaatctaaccccaaaaagagaaacaacctttagcctttgattttactaatgatc 11444  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttttccaaccttatgaattttccccaaaatgcaccaaccc 203  Q
    |||| ||||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||| ||||||  |||||| ||| |||||| ||||||||||    
T  11443 ttctcttttggtttcacaagactcacccaagttgctcagaaatgactctccactcatgtgtttcccaaccccatgaatcttctccaaaaggcaccaaccc 11344  T
Q  204 ttttcccaagagccccctcctttgcttctcc 234  Q
    ||| |||||||||||| || |||| ||||||    
T  11343 tttccccaagagccccatcttttggttctcc 11313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 144
Target Start/End: Original strand, 1591 - 1729
Alignment:
Q  15 tctcccaaggtgtttac-aattgtttcccaactctataatctaacccccaaaagagaaccaaccctt----------agcctttgatttcactaaggatc 103  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| |||||||||||||||||| |||          ||| ||||||||| |||||||||    
T  1591 tctcccaaggtgttttctaattgtttcccaactctagaatctaa-ccccaaaagagaaccaacacttataagttataagcttttgatttc-ctaaggatc 1688  T
Q  104 ttctattttggtttcacaagactcactcaagttgctcacaa 144  Q
    |||| ||||| | || |||||||| | ||||||||||||||    
T  1689 ttctcttttgatctcccaagactcgcccaagttgctcacaa 1729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 25032 - 25000
Alignment:
Q  9 tttcactctcccaaggtgtttacaattgtttcc 41  Q
    |||||||||||||||||||||||||||||||||    
T  25032 tttcactctcccaaggtgtttacaattgtttcc 25000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 490661 - 490770
Alignment:
Q  35 tgtttcccaactctataatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaag 134  Q
    ||||||||||||||| | ||||||||| ||||| ||||||| || |||| ||||||||| |||| ||| | || ||||||| ||  ||||||| | ||||    
T  490661 tgtttcccaactctagattctaacccctaaaag-gaaccaatccgtagcttttgatttc-ctaatgatatactcttttggtctcgtaagactcgcccaag 490758  T
Q  135 ttgctcacaaaa 146  Q
    ||||||| ||||    
T  490759 ttgctcataaaa 490770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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