View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10862_low_16 (Length: 339)
Name: NF10862_low_16
Description: NF10862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10862_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 18 - 328
Target Start/End: Complemental strand, 36382360 - 36382050
Alignment:
| Q |
18 |
gtgttcatgtagccaaactacctttacgctatcaacccaatccatgtttaaattttcaggcatggttgtcatccattcacttgaagtaagtcgcaaaaac |
117 |
Q |
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| T |
36382360 |
gtgttcatgtagccaaactacctttacgctatcaacccaatccatgtttaaattttcaggcatggttgtcatccattcacttgaagtaagtcgcaaaaac |
36382261 |
T |
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| Q |
118 |
atcccattttctgctgccaaccacatattgtattcaccaaagttctgcataaaatagttgttatttcttacaaaagcaaatgttgctgaacattgaaaaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
36382260 |
atcccattttctgctgccaaccacatattgtattcaccaaagttctgcatgaaatagttgttatttattacaaaagcaaatgttgctgaacattgaaaaa |
36382161 |
T |
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| Q |
218 |
caaataaacttttctaaagaatactttgtctaggacagctctaccactcccactcagaacaaccactgttgtctttgggtcatcagatagcttctttaaa |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36382160 |
caaataaacttttctaaagaatactttgtctaggacagctctaccactcccactcagaacaaccactgttgtctttgggtcatcagatagcttctttaaa |
36382061 |
T |
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| Q |
318 |
ggttccttcat |
328 |
Q |
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||||||||||| |
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| T |
36382060 |
ggttccttcat |
36382050 |
T |
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