View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10862_low_8 (Length: 407)
Name: NF10862_low_8
Description: NF10862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10862_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 18 - 395
Target Start/End: Original strand, 10996795 - 10997169
Alignment:
| Q |
18 |
ctcctcctcctcttacgatcttcttcttcttccgaattggtatcgctatcactttcactatacttcctactctttctcctcttcctatcttccacttctg |
117 |
Q |
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| T |
10996795 |
ctcctcctcctcttacgatctt---cttcttcggaattggtatcgctatcactttcactatacttcctactctttctcctcttcctatcttccacttctg |
10996891 |
T |
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| Q |
118 |
attcagactcagattcactatcgctttcacgcgacttcttataactttttctcctcttcttcctcaaatccgaatcagattctttagattcctccgattc |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
10996892 |
attcagactcagattcactatcgctttcacgcgacttcttataactttttctcctcttcttcctcaattccgaatcagattctttagattcctccgattc |
10996991 |
T |
|
| Q |
218 |
agactcagattttgctttctgtttaatctccttatccttcttcacatcaattatctcagaaatttcttcaggtttaccataatcttcaagatcatcgttc |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10996992 |
agactcagattttgctttctgtttaatctccttatccttcttcacatcaattatctcagaaatttcttcaggtttaccataatcttcaagatcatcgttc |
10997091 |
T |
|
| Q |
318 |
tcacgtctcggaggactcggcgtaacattccaaatacagtgcttcaacgatttcctcatcttctgcctcttcaatctg |
395 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10997092 |
tcgcgtctcggaggactcggcgtaacattccaaatacagtgcttcaacgatttcctcatcttctgcctcttcaatctg |
10997169 |
T |
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