View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10864_5 (Length: 305)

Name: NF10864_5
Description: NF10864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10864_5
NF10864_5
[»] chr8 (30 HSPs)
chr8 (21-279)||(41831834-41832109)
chr8 (21-98)||(41838219-41838296)
chr8 (178-279)||(41837625-41837726)
chr8 (93-238)||(22651958-22652107)
chr8 (94-176)||(41838119-41838199)
chr8 (93-197)||(29510273-29510381)
chr8 (93-238)||(36450693-36450831)
chr8 (98-164)||(22595981-22596045)
chr8 (94-166)||(25192353-25192423)
chr8 (94-225)||(5813575-5813699)
chr8 (94-238)||(15816057-15816205)
chr8 (99-205)||(31556985-31557083)
chr8 (93-167)||(24857991-24858065)
chr8 (97-166)||(18407705-18407772)
chr8 (93-166)||(20873051-20873122)
chr8 (96-148)||(13436988-13437038)
chr8 (95-163)||(30271300-30271366)
chr8 (94-165)||(22204622-22204693)
chr8 (99-166)||(24613509-24613573)
chr8 (111-166)||(25566841-25566894)
chr8 (161-225)||(29447498-29447562)
chr8 (97-176)||(44067502-44067579)
chr8 (97-197)||(8343302-8343406)
chr8 (93-166)||(2572062-2572133)
chr8 (97-162)||(4673435-4673498)
chr8 (167-225)||(14134748-14134806)
chr8 (103-205)||(29447071-29447177)
chr8 (96-165)||(30077394-30077461)
chr8 (97-165)||(22197749-22197815)
chr8 (111-164)||(31514872-31514924)
[»] chr4 (30 HSPs)
chr4 (178-279)||(11650636-11650737)
chr4 (21-98)||(11651230-11651309)
chr4 (93-225)||(23292938-23293063)
chr4 (94-176)||(11651130-11651210)
chr4 (93-166)||(30298928-30299000)
chr4 (93-166)||(30327796-30327868)
chr4 (97-205)||(3947733-3947839)
chr4 (97-197)||(40481623-40481720)
chr4 (95-166)||(49431009-49431079)
chr4 (98-166)||(42640513-42640582)
chr4 (104-164)||(715615-715674)
chr4 (104-164)||(752941-753000)
chr4 (97-166)||(21945489-21945556)
chr4 (94-205)||(22234851-22234967)
chr4 (103-225)||(24613642-24613768)
chr4 (101-165)||(28084511-28084574)
chr4 (93-166)||(12797344-12797414)
chr4 (94-187)||(4383351-4383447)
chr4 (96-164)||(27706185-27706251)
chr4 (97-164)||(11596360-11596425)
chr4 (93-187)||(12895101-12895192)
chr4 (97-164)||(19482654-19482719)
chr4 (161-197)||(30982847-30982883)
chr4 (93-162)||(28720858-28720924)
chr4 (95-188)||(36635308-36635400)
chr4 (93-182)||(24343489-24343576)
chr4 (93-166)||(35157991-35158062)
chr4 (97-166)||(12708132-12708200)
chr4 (97-130)||(24543967-24544000)
chr4 (93-224)||(12895227-12895351)
[»] chr5 (38 HSPs)
chr5 (93-226)||(15382459-15382593)
chr5 (97-225)||(31084309-31084435)
chr5 (94-197)||(39698524-39698631)
chr5 (93-194)||(21522732-21522837)
chr5 (93-194)||(21533298-21533403)
chr5 (93-166)||(14674251-14674322)
chr5 (93-166)||(21191062-21191133)
chr5 (93-166)||(13287405-13287476)
chr5 (96-205)||(42893345-42893447)
chr5 (98-166)||(6247609-6247675)
chr5 (106-166)||(15883982-15884041)
chr5 (93-164)||(4105239-4105310)
chr5 (100-166)||(33178014-33178078)
chr5 (93-166)||(21576751-21576822)
chr5 (103-166)||(7218273-7218334)
chr5 (97-197)||(21542016-21542120)
chr5 (84-166)||(21351911-21351991)
chr5 (93-146)||(19552569-19552620)
chr5 (93-166)||(19579683-19579754)
chr5 (93-127)||(22013396-22013430)
chr5 (93-161)||(22299492-22299557)
chr5 (93-166)||(24906307-24906378)
chr5 (133-189)||(5467961-5468017)
chr5 (95-166)||(8420011-8420080)
chr5 (93-129)||(15410489-15410525)
chr5 (93-164)||(43001782-43001851)
chr5 (111-150)||(2952268-2952306)
chr5 (94-189)||(12641657-12641756)
chr5 (103-166)||(30135305-30135367)
chr5 (93-150)||(6770525-6770580)
chr5 (93-127)||(36642805-36642839)
chr5 (93-166)||(37328850-37328921)
chr5 (93-165)||(6326304-6326374)
chr5 (89-150)||(7677681-7677742)
chr5 (96-150)||(14422889-14422939)
chr5 (95-166)||(10298553-10298622)
chr5 (95-166)||(17177029-17177098)
chr5 (97-148)||(41995457-41995506)
[»] scaffold0103 (1 HSPs)
scaffold0103 (93-194)||(51793-51890)
[»] chr7 (33 HSPs)
chr7 (96-223)||(24339627-24339758)
chr7 (93-239)||(43027402-43027546)
chr7 (93-197)||(13770673-13770775)
chr7 (93-238)||(21864788-21864928)
chr7 (96-225)||(5409783-5409910)
chr7 (93-166)||(11061082-11061153)
chr7 (96-225)||(15680794-15680916)
chr7 (96-164)||(25481887-25481953)
chr7 (97-163)||(13557750-13557817)
chr7 (97-166)||(21560484-21560556)
chr7 (93-166)||(24105660-24105731)
chr7 (111-197)||(9778500-9778584)
chr7 (98-197)||(32093995-32094093)
chr7 (93-176)||(43249975-43250056)
chr7 (98-225)||(7438693-7438824)
chr7 (109-166)||(3991322-3991377)
chr7 (97-166)||(7197303-7197370)
chr7 (93-166)||(18215192-18215263)
chr7 (93-166)||(27945023-27945094)
chr7 (101-166)||(2334238-2334303)
chr7 (90-127)||(12010023-12010060)
chr7 (160-224)||(9933326-9933389)
chr7 (96-166)||(21930614-21930681)
chr7 (103-166)||(25822647-25822708)
chr7 (115-195)||(26033432-26033516)
chr7 (102-197)||(11665409-11665508)
chr7 (96-150)||(32308105-32308157)
chr7 (97-166)||(9408340-9408407)
chr7 (93-150)||(26733286-26733341)
chr7 (166-239)||(598256-598329)
chr7 (133-182)||(5938492-5938541)
chr7 (93-149)||(11722121-11722175)
chr7 (97-166)||(18038981-18039052)
[»] chr6 (38 HSPs)
chr6 (97-225)||(24645466-24645588)
chr6 (93-189)||(12696306-12696400)
chr6 (96-197)||(16766682-16766787)
chr6 (93-224)||(28152081-28152204)
chr6 (96-187)||(10770659-10770748)
chr6 (94-166)||(27904042-27904114)
chr6 (93-163)||(17841598-17841666)
chr6 (93-166)||(9107376-9107447)
chr6 (93-166)||(34595116-34595187)
chr6 (103-237)||(8713971-8714110)
chr6 (97-205)||(16833294-16833395)
chr6 (97-176)||(3209367-3209446)
chr6 (93-225)||(4877924-4878049)
chr6 (93-197)||(8365488-8365596)
chr6 (93-164)||(8776981-8777050)
chr6 (100-166)||(7977836-7977900)
chr6 (93-166)||(426520-426591)
chr6 (93-150)||(9658861-9658916)
chr6 (93-166)||(31959141-31959212)
chr6 (103-225)||(32978851-32978967)
chr6 (160-224)||(5000568-5000632)
chr6 (97-197)||(5970077-5970181)
chr6 (93-165)||(17302538-17302609)
chr6 (93-150)||(3398601-3398655)
chr6 (96-166)||(7938101-7938169)
chr6 (97-160)||(31429015-31429076)
chr6 (112-166)||(9911534-9911587)
chr6 (98-166)||(1681745-1681811)
chr6 (98-166)||(7801162-7801228)
chr6 (93-164)||(17435181-17435250)
chr6 (101-166)||(853865-853928)
chr6 (93-127)||(9027160-9027194)
chr6 (118-166)||(9522898-9522944)
chr6 (93-165)||(17341671-17341741)
chr6 (93-130)||(23771561-23771598)
chr6 (107-166)||(1191706-1191763)
chr6 (95-150)||(7265615-7265668)
chr6 (99-154)||(24115865-24115918)
[»] scaffold0019 (1 HSPs)
scaffold0019 (97-225)||(71709-71843)
[»] chr3 (45 HSPs)
chr3 (98-225)||(4987232-4987363)
chr3 (94-238)||(27505229-27505371)
chr3 (97-187)||(21479104-21479193)
chr3 (97-166)||(16000022-16000089)
chr3 (93-166)||(28917983-28918054)
chr3 (96-172)||(35994738-35994811)
chr3 (93-238)||(55401057-55401195)
chr3 (93-197)||(10954934-10955031)
chr3 (97-161)||(14747547-14747610)
chr3 (100-166)||(26508099-26508163)
chr3 (93-166)||(8587027-8587098)
chr3 (96-165)||(10268493-10268560)
chr3 (103-189)||(14209105-14209195)
chr3 (104-189)||(34307763-34307846)
chr3 (98-166)||(21256992-21257058)
chr3 (89-197)||(14832077-14832189)
chr3 (97-148)||(40052318-40052367)
chr3 (97-166)||(14829676-14829742)
chr3 (94-225)||(28812499-28812633)
chr3 (93-127)||(3865599-3865633)
chr3 (93-127)||(10318077-10318111)
chr3 (93-166)||(10335292-10335363)
chr3 (100-165)||(11610510-11610573)
chr3 (93-166)||(15796300-15796371)
chr3 (97-166)||(20503451-20503518)
chr3 (96-166)||(25775493-25775562)
chr3 (93-162)||(26492215-26492282)
chr3 (97-166)||(34185129-34185196)
chr3 (97-166)||(39756222-39756289)
chr3 (93-165)||(14216874-14216944)
chr3 (93-165)||(14223003-14223073)
chr3 (93-164)||(3164033-3164102)
chr3 (93-172)||(24205041-24205118)
chr3 (93-164)||(25948895-25948964)
chr3 (103-166)||(34910309-34910370)
chr3 (97-225)||(40993287-40993409)
chr3 (111-166)||(51206359-51206412)
chr3 (97-167)||(3610619-3610687)
chr3 (133-192)||(5339128-5339187)
chr3 (111-166)||(8593136-8593190)
chr3 (96-150)||(14979166-14979218)
chr3 (93-166)||(8383239-8383310)
chr3 (111-166)||(1509539-1509592)
chr3 (95-127)||(32400748-32400780)
chr3 (103-166)||(49651792-49651853)
[»] chr1 (46 HSPs)
chr1 (93-225)||(1486656-1486786)
chr1 (93-166)||(18471280-18471353)
chr1 (83-197)||(22515867-22515974)
chr1 (97-166)||(5944267-5944336)
chr1 (97-166)||(31694716-31694785)
chr1 (93-197)||(46348363-46348460)
chr1 (93-197)||(18556425-18556533)
chr1 (103-197)||(51410016-51410104)
chr1 (97-165)||(6427447-6427516)
chr1 (101-164)||(113289-113350)
chr1 (97-225)||(47989484-47989615)
chr1 (93-164)||(13011223-13011293)
chr1 (95-225)||(37598816-37598938)
chr1 (93-150)||(398787-398842)
chr1 (97-166)||(22881622-22881689)
chr1 (93-166)||(38078667-38078738)
chr1 (93-166)||(42359455-42359526)
chr1 (93-166)||(48450593-48450664)
chr1 (94-166)||(1815240-1815310)
chr1 (102-166)||(19058862-19058924)
chr1 (132-225)||(40258885-40258973)
chr1 (95-166)||(9103624-9103692)
chr1 (161-225)||(9828098-9828162)
chr1 (96-162)||(31672905-31672969)
chr1 (111-197)||(52284702-52284792)
chr1 (93-150)||(2896143-2896198)
chr1 (93-166)||(5376506-5376577)
chr1 (93-166)||(6612177-6612248)
chr1 (89-150)||(12443482-12443541)
chr1 (97-165)||(14359529-14359594)
chr1 (97-166)||(24577192-24577259)
chr1 (93-166)||(31015025-31015096)
chr1 (94-166)||(1704998-1705068)
chr1 (97-225)||(5898218-5898339)
chr1 (93-157)||(15641045-15641107)
chr1 (93-166)||(26526762-26526835)
chr1 (93-197)||(40917733-40917839)
chr1 (93-166)||(48040467-48040539)
chr1 (95-166)||(24334711-24334781)
chr1 (93-154)||(1262866-1262925)
chr1 (97-150)||(13997869-13997920)
chr1 (93-166)||(21378560-21378631)
chr1 (97-150)||(36878447-36878498)
chr1 (92-148)||(6427331-6427385)
chr1 (93-150)||(9033029-9033085)
chr1 (97-165)||(29144365-29144431)
[»] scaffold0246 (1 HSPs)
scaffold0246 (97-197)||(19562-19659)
[»] chr2 (37 HSPs)
chr2 (93-150)||(24894371-24894426)
chr2 (93-166)||(37558959-37559030)
chr2 (93-166)||(19536403-19536475)
chr2 (93-207)||(30404820-30404927)
chr2 (93-166)||(18421945-18422016)
chr2 (96-154)||(27460011-27460068)
chr2 (93-150)||(10547950-10548007)
chr2 (93-166)||(14996229-14996301)
chr2 (93-165)||(21374706-21374776)
chr2 (97-166)||(21624252-21624320)
chr2 (93-225)||(2438671-2438794)
chr2 (93-166)||(6940237-6940308)
chr2 (93-166)||(20539680-20539751)
chr2 (93-166)||(30717536-30717607)
chr2 (93-196)||(15972855-15972951)
chr2 (97-164)||(38117167-38117232)
chr2 (108-166)||(5040729-5040787)
chr2 (93-166)||(15657846-15657917)
chr2 (93-150)||(16069276-16069331)
chr2 (96-197)||(18840993-18841087)
chr2 (97-166)||(20473308-20473375)
chr2 (95-225)||(37419727-37419861)
chr2 (93-166)||(23058448-23058520)
chr2 (97-197)||(28677895-28677993)
chr2 (103-189)||(5891762-5891845)
chr2 (94-165)||(21091706-21091775)
chr2 (102-165)||(33153415-33153476)
chr2 (96-166)||(11223869-11223937)
chr2 (93-166)||(12940941-12941012)
chr2 (93-150)||(21616744-21616799)
chr2 (97-150)||(31808063-31808114)
chr2 (94-182)||(19573962-19574047)
chr2 (98-150)||(21782840-21782890)
chr2 (93-165)||(39323246-39323316)
chr2 (135-187)||(44635520-44635573)
chr2 (102-166)||(12224212-12224276)
chr2 (161-197)||(35056922-35056958)
[»] scaffold0306 (1 HSPs)
scaffold0306 (93-188)||(13382-13476)
[»] scaffold0223 (1 HSPs)
scaffold0223 (93-165)||(20154-20224)
[»] scaffold0152 (1 HSPs)
scaffold0152 (93-188)||(21851-21945)
[»] scaffold0004 (2 HSPs)
scaffold0004 (98-166)||(123612-123681)
scaffold0004 (94-165)||(92790-92859)
[»] scaffold0053 (1 HSPs)
scaffold0053 (93-197)||(8780-8877)
[»] scaffold0793 (1 HSPs)
scaffold0793 (104-164)||(4891-4950)
[»] scaffold0066 (1 HSPs)
scaffold0066 (103-181)||(33355-33430)
[»] scaffold0652 (1 HSPs)
scaffold0652 (93-166)||(468-539)
[»] scaffold0027 (1 HSPs)
scaffold0027 (93-166)||(46664-46735)
[»] scaffold0018 (2 HSPs)
scaffold0018 (93-165)||(178825-178896)
scaffold0018 (94-165)||(192256-192325)
[»] scaffold0171 (2 HSPs)
scaffold0171 (97-187)||(23406-23494)
scaffold0171 (98-165)||(23497-23563)
[»] scaffold0136 (1 HSPs)
scaffold0136 (97-237)||(3778-3922)
[»] scaffold0003 (2 HSPs)
scaffold0003 (93-197)||(241576-241684)
scaffold0003 (94-146)||(348083-348135)
[»] scaffold0722 (1 HSPs)
scaffold0722 (94-164)||(7040-7108)
[»] scaffold0025 (1 HSPs)
scaffold0025 (95-166)||(23753-23823)
[»] scaffold0021 (1 HSPs)
scaffold0021 (93-166)||(130464-130535)
[»] scaffold0361 (1 HSPs)
scaffold0361 (103-163)||(14522-14580)
[»] scaffold0083 (1 HSPs)
scaffold0083 (93-166)||(45536-45608)
[»] scaffold0050 (1 HSPs)
scaffold0050 (97-224)||(70264-70384)
[»] scaffold0036 (1 HSPs)
scaffold0036 (161-225)||(9688-9752)
[»] scaffold0007 (1 HSPs)
scaffold0007 (93-176)||(225264-225345)
[»] scaffold0450 (1 HSPs)
scaffold0450 (98-197)||(8604-8707)
[»] scaffold0008 (1 HSPs)
scaffold0008 (160-189)||(263349-263378)
[»] scaffold0011 (1 HSPs)
scaffold0011 (95-166)||(17755-17824)


Alignment Details
Target: chr8 (Bit Score: 138; Significance: 4e-72; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 21 - 279
Target Start/End: Complemental strand, 41832109 - 41831834
Alignment:
Q  21 attatgtgggaatcacaccaactttagagtaatgaaatatctgttgtaatcc--ttggcctctagcctaagaagcacggacactgacac----------- 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| || |||||               
T  41832109 attatgtgggaatcacaccaactttagagtaatgaaatatctgttgtaatccccttggcctctagcctaagaagcacggatacggacacaagatacaaca 41832010  T
Q  108 -------gccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgacaaca 200  Q
           |||||||||| ||||||||| ||  |||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  41832009 cagacatgccgacacagttaataatttgaa--aaaatcacataattcagtgtaactacaagtgtcgtgttggtgtcggacacgatacgtatccgacaaca 41831912  T
Q  201 ggacatgtataattcgaggagtgtcatttcttcatagccactagctagtttgttgccatcttttatggatctgggcaca 279  Q
    ||||| || ||||||||||||||||  |||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  41831911 ggacacgtctaattcgaggagtgtccattcttcatag-cactagttagtttgttgccatcttttatggatctgggcaca 41831834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 41838296 - 41838219
Alignment:
Q  21 attatgtgggaatcacaccaactttagagtaatgaaatatctgttgtaatccttggcctctagcctaagaagcacgga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41838296 attatgtgggaatcacaccaactttagagtaatgaaatatctgttgtaatccttggcctctagcctaagaagcacgga 41838219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 41837726 - 41837625
Alignment:
Q  178 gacacgacacgtatccgacaacaggacatgtataattcgaggagtgtcatttcttcatagccactagctagtttgttgccatcttttatggatctgggca 277  Q
    ||||||||| |||||||||||||| ||| || |||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41837726 gacacgacatgtatccgacaacagaacacgtctaatccgaagagtgtccgttcttcatagccactagctagtttgttgccatcttttatggatctgggca 41837627  T
Q  278 ca 279  Q
    ||    
T  41837626 ca 41837625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 22651958 - 22652107
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 186  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| ||||| |||||      |||||||||||||||| |||||||||    
T  22651958 cacggacactgacacgccgacacagctaataatttga--aaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgaca 22652055  T
Q  187 cgtatccgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 238  Q
     || ||||||| | ||||| || |||| |||||||||||  | |||||||||    
T  22652056 tgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagc 22652107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 41838199 - 41838119
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtc 176  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||  |||||||||||| |||||||||||    
T  41838199 acggacactgacacgtcgacacagctaataatttaaa--aaaatcacataattcagtgcaactacaagtgttgtgtcggtgtc 41838119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 29510381 - 29510273
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc------gtgtcggtgtcagacacgaca 186  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||| |||||||||||| ||||||||||      ||||||||||| ||||||||     
T  29510381 cacggacactgacacgccgacacagctaataatttga--aaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacg 29510284  T
Q  187 cgtatccgaca 197  Q
    ||| |||||||    
T  29510283 cgtgtccgaca 29510273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 36450831 - 36450693
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    |||||||||||||||||||||||| |||||||||| ||  ||||||||| |||||||| ||| ||||||||| |     ||||| |||||||| ||| ||    
T  36450831 cacggacactgacacgccgacacaactaataatttgaa--aaaatcacagaattcagtgtaattacaagtgtag-----gtgtcggacacgacgcgtgtc 36450739  T
Q  193 cgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 238  Q
    ||||| ||||||| |  |||| |||||||||||  | |||||||||    
T  36450738 cgacaccaggacacgcctaatccgaggagtgtctgtgcttcatagc 36450693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 22595981 - 22596045
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||||| ||| |||||||||    
T  22595981 acactgacacgccgacacagctaataatttaa--aaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 25192423 - 25192353
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||||||||||||||||| |  |||| | |||||||||||||||| || ||||||||    
T  25192423 acggacactgacacgccgacacagctaataatttga--aaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 225
Target Start/End: Original strand, 5813575 - 5813699
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatcc 193  Q
    |||||||| ||||||||||||||||||||||||| |  |||| ||||||| || ||| ||| |||||     ||||||||||| |||||||||||| |||    
T  5813575 acggacacggacacgccgacacagctaataatttga--aaaagtcacatattttagtgtaaatacaa-----gtgtcggtgtcggacacgacacgtgtcc 5813667  T
Q  194 gacaacaggacatgtataattcgaggagtgtc 225  Q
    |||| | ||||| |  ||||| ||||||||||    
T  5813668 gacaccgggacacgcctaattggaggagtgtc 5813699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 238
Target Start/End: Complemental strand, 15816205 - 15816057
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacac 187  Q
    ||||||||||||||||||||||| |||||||||| |  ||||||||||||||| ||| ||| || ||      ||||||||| |||||| ||||||||||    
T  15816205 acggacactgacacgccgacacaactaataatttga--aaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacac 15816108  T
Q  188 gtatccgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 238  Q
    | |||||||| | ||||| |  |||| |||| ||||||  | |||||||||    
T  15816107 gaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 15816057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 31556985 - 31557083
Alignment:
Q  99 cactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgacaa 198  Q
    ||||||||||||||||||| |||||||||    ||||||||||||||||||| ||| |||||     || ||||||||||||||||||| | |||||||     
T  31556985 cactgacacgccgacacagttaataattt---gaaaaatcacataattcagtgtaattacaa-----gtttcggtgtcagacacgacacatgtccgacac 31557076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 24857991 - 24858065
Alignment:
Q  93 cacggacactgacacgccgacacagctaataattt-aaataaaaatcacataattcagtataactacaagtgtcgt 167  Q
    ||||||||  ||||||||||||||| ||||||||| ||| ||||||||||||||||||| ||| ||||||||||||    
T  24857991 cacggacatggacacgccgacacagttaataatttgaaaaaaaaatcacataattcagtgtaa-tacaagtgtcgt 24858065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 18407705 - 18407772
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||| |||| ||||||||||||||||||| |||  |||||||||||||||||| ||| |||||||||||    
T  18407705 gacacagacatgccgacacagctaataattcaaa--aaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 20873051 - 20873122
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||||| || ||||||||| |  ||||||||||||||| ||| ||| |||||||||||    
T  20873051 cacggacactgacacgccgacatagataataatttga--aaaaatcacataatttagtgtaattacaagtgtcg 20873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 13437038 - 13436988
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattca 148  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  13437038 ggacactgacacgccgacacagctaataatttga--aaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 30271366 - 30271300
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtg 163  Q
    |||||||||||||||||||||||||||| |||| |  |||||||||||||| |||| ||| ||||||||    
T  30271366 cggacactgacacgccgacacagctaatcatttga--aaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 22204622 - 22204693
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    ||||||||||||||||||||||| ||||||||||||| || |   | |||||||||| ||| ||||||||||    
T  22204622 acggacactgacacgccgacacaactaataatttaaaaaatatatatataattcagtgtaattacaagtgtc 22204693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 24613509 - 24613573
Alignment:
Q  99 cactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||| |||||||||||||||||||    ||||||||||||||| ||| ||| |||||||||||    
T  24613509 cactgacacaccgacacagctaataattt---gaaaaatcacataattaagtgtaattacaagtgtcg 24613573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 25566841 - 25566894
Alignment:
Q  111 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  25566841 gacacagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 25566894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 29447498 - 29447562
Alignment:
Q  161 gtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtc 225  Q
    |||||||||||||||||||||||||| || ||||||| | ||||| || ||||  ||||||||||    
T  29447498 gtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtc 29447562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 44067502 - 44067579
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtc 176  Q
    ||||||||||||||||||| | ||||||||| |   ||||| ||||||| |||| ||| || ||||||||||||||||||    
T  44067502 gacactgacacgccgacacggataataatttgag--aaaatgacataatacagtgtaattataagtgtcgtgtcggtgtc 44067579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 8343302 - 8343406
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcg-----gtgtcagacacgacacgta 190  Q
    ||||| ||||| |||||| |||||||||||| ||  |||||||||||||| ||| ||| |||||||||| ||||||     ||||| ||||||||||||     
T  8343302 gacaccgacacaccgacatagctaataatttgaa--aaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtg 8343399  T
Q  191 tccgaca 197  Q
    |||||||    
T  8343400 tccgaca 8343406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 2572133 - 2572062
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||| || |||||| ||||||| |||||||||| ||  |||||||||||||| ||| ||| |||||||||||    
T  2572133 cacggataccgacacgtcgacacacctaataatttgaa--aaaatcacataatttagtgtaattacaagtgtcg 2572062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 4673498 - 4673435
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagt 162  Q
    ||||||||||||||||||||| ||||||||| |  |||||||| | |||||||| ||| |||||||    
T  4673498 gacactgacacgccgacacagataataatttga--aaaaatcataaaattcagtgtaattacaagt 4673435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 14134748 - 14134806
Alignment:
Q  167 tgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtc 225  Q
    ||||||||||| ||||||||||| |||| || ||||||| |  ||||||||||||||||    
T  14134748 tgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtc 14134806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 29447177 - 29447071
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg------tgtcggtgtcagacacgacacgtatccgac 196  Q
    |||||| ||||||| |||||||||| |   |||||||||||||||| | |||||||||||||||      |||||||||| ||||||||| || || |||    
T  29447177 gacacgtcgacacaactaataatttgag--aaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgac 29447080  T
Q  197 aacaggaca 205  Q
    | |||||||    
T  29447079 accaggaca 29447071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 30077461 - 30077394
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||| |||||||| || ||||||||||||| ||  || ||||||||||||||| ||| ||||||||||    
T  30077461 ggacacggacacgccaacgcagctaataatttgaa--aacatcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 22197815 - 22197749
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||| ||||||| |||||||||||||||| |  |||| |||||||||| ||| ||| ||||||||||    
T  22197815 gacactaacacgccaacacagctaataatttga--aaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 31514872 - 31514924
Alignment:
Q  111 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||||| |||||||||| || ||||||||||||||||||  |||||||||||||    
T  31514872 gacacaactaataatttgaa-aaaaatcacataattcagcgtaactacaagtgt 31514924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 11650737 - 11650636
Alignment:
Q  178 gacacgacacgtatccgacaacaggacatgtataattcgaggagtgtcatttcttcatagccactagctagtttgttgccatcttttatggatctgggca 277  Q
    ||||||||| |||||||||||||| ||| || |||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11650737 gacacgacatgtatccgacaacagaacacgtctaatccgaagagtgtccgttcttcatagccactagctagtttgttgccatcttttatggatctgggca 11650638  T
Q  278 ca 279  Q
    ||    
T  11650637 ca 11650636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 11651309 - 11651230
Alignment:
Q  21 attatgtgggaatcacaccaactttagagtaatgaaatatctgttgtaat--ccttggcctctagcctaagaagcacgga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11651309 attatgtgggaatcacaccaactttagagtaatgaaatatctgttgtaatccccttggcctctagcctaagaagcacgga 11651230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 23293063 - 23292938
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    |||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||     ||||||||| |||||||||||| ||    
T  23293063 cacggacaatgacacgccgacacagctaataatttgaa--aaaatcacataattcagtataattacaagt-----gtcggtgtcggacacgacacgtgtc 23292971  T
Q  193 cgacaacaggacatgtataattcgaggagtgtc 225  Q
    ||||| | ||||| |  |||| |||||||||||    
T  23292970 cgacaccgggacacgcctaatccgaggagtgtc 23292938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 11651210 - 11651130
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtc 176  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||  |||||||||||| |||||||||||    
T  11651210 acggacactgacacgtcgacacagctaataatttaaa--aaaatcacataattcagtgcaactacaagtgttgtgtcggtgtc 11651130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 30298928 - 30299000
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| ||| |||||||||||    
T  30298928 cacggacactgacacgccgacacagctaataatttgaa-aaaaatgacataattcagtgtaattacaagtgtcg 30299000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 30327796 - 30327868
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| ||| |||||||||||    
T  30327796 cacggacactgacacgccgacacagctaataatttgaa-aaaaatgacataattcagtgtaattacaagtgtcg 30327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 3947839 - 3947733
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtatccga 195  Q
    ||||| |||| |||||||||||||||||||| |  ||||||| ||||||||||| ||| |||||||||| ||||| ||||| |||||||||||| |||||    
T  3947839 gacacggacatgccgacacagctaataatttga--aaaaatcgcataattcagtgtaattacaagtgtcagtgtc-gtgtcggacacgacacgtgtccga 3947743  T
Q  196 caacaggaca 205  Q
    || |||||||    
T  3947742 caccaggaca 3947733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 40481623 - 40481720
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 196  Q
    |||||||||||||||| ||| |||||||||| ||   ||||||||||||||||| ||| |||||||||  |||||||||  |||||||||||| ||||||    
T  40481623 gacactgacacgccgatacaactaataatttgaa---aaatcacataattcagtgtaattacaagtgttatgtcggtgttggacacgacacgtgtccgac 40481719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 49431009 - 49431079
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||| |||||||||||||||||||||||||| || ||||||||||||||||||| ||| || ||||||||    
T  49431009 cggacagtgacacgccgacacagctaataatttgaa-aaaaatcacataattcagtgtaattaaaagtgtcg 49431079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 42640513 - 42640582
Alignment:
Q  98 acactgacacgccgacacagctaataattt-aaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||| ||| |||||||||||    
T  42640513 acacggacacgccgacacagctgataatttgaaaaaaaaatcacataattcagtgtaattacaagtgtcg 42640582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 715674 - 715615
Alignment:
Q  104 acacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  715674 acacaccgacacagctaataatttaaa-aaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 753000 - 752941
Alignment:
Q  104 acacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  753000 acacaccgacacagctaataatttaaa-aaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 21945489 - 21945556
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| |||||||||||||||||||| |  |||||| |||||||||||| ||| |||||||||||    
T  21945489 gacactgacatgccgacacagctaataatttga--aaaaatgacataattcagtgtaattacaagtgtcg 21945556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 22234967 - 22234851
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg------tgtcggtgtcagacacgacac 187  Q
    |||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||||| ||| |  | ||||||      |||||||||| ||||||||||    
T  22234967 acggacacggacacgccgacaccgctaaaaatttgaa-aaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacac 22234869  T
Q  188 gtatccgacaacaggaca 205  Q
    || ||||||| |||||||    
T  22234868 gtgtccgacaccaggaca 22234851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 225
Target Start/End: Complemental strand, 24613768 - 24613642
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg------tgtcggtgtcagacacgacacgtatccgac 196  Q
    |||||| ||||||| |||||||||| |   |||||||||||||||| | ||| |||||||||||      ||||||||||||||||||||||| || |||    
T  24613768 gacacgtcgacacaactaataatttgag--aaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgac 24613671  T
Q  197 aacaggacatgtataattcgaggagtgtc 225  Q
    | ||||||| || |||| | |||||||||    
T  24613670 accaggacacgtctaatcctaggagtgtc 24613642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 28084511 - 28084574
Alignment:
Q  101 ctgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||| | ||| ||||||||||    
T  28084511 ctgacacgccgacacagctaagaatttgaa-aaaaatcacataattcaatgtaattacaagtgtc 28084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 12797414 - 12797344
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||| || | |||||||||| ||   ||||||||||||||||| ||| |||||||||||    
T  12797414 cacggacactgacacgccggcaaaactaataatttgaa---aaatcacataattcagtgtaattacaagtgtcg 12797344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 4383351 - 4383447
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacacgacac 187  Q
    ||||||||||||||| ||| ||| ||||||||||    ||||||||||||||||||| ||| ||||      |||||||||||||||||| |||||||||    
T  4383351 acggacactgacacgtcgatacaactaataattt---gaaaaatcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacgacac 4383447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 27706251 - 27706185
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    ||||||||||||| |||||||  |||||||||||  ||||||||||||||| ||| ||| |||||||||    
T  27706251 ggacactgacacgtcgacacaattaataatttaa--aaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 11596425 - 11596360
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||||||| ||||| ||| |||||||||||| ||  |||||||||||||||||| ||| |||||||||    
T  11596425 gacactgatacgccaacaaagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgt 11596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 12895192 - 12895101
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacac 187  Q
    ||||||||| |||||||||| |||||||||||||| |  |||||||||||||||||   ||| |||||||||| ||||| ||||| ||||||||||    
T  12895192 cacggacac-gacacgccgaaacagctaataatttga--aaaaatcacataattcaaagtaattacaagtgtcggtgtc-gtgtcggacacgacac 12895101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 19482654 - 19482719
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||||||||||||||||||| |||||||||| |  ||| |||||||||||| || ||| |||||||||    
T  19482654 gacactgacacgccgacacaactaataatttga--aaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 30982883 - 30982847
Alignment:
Q  161 gtgtcgtgtcggtgtcagacacgacacgtatccgaca 197  Q
    ||||||||||||||||||||||||||||| |||||||    
T  30982883 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca 30982847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 28720858 - 28720924
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagt 162  Q
    |||| ||||||||| ||||||||||||||||||||    |||||||| ||||| |||| |||||||||||    
T  28720858 cacgaacactgacatgccgacacagctaataattt---gaaaaatcatataatgcagtgtaactacaagt 28720924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 36635308 - 36635400
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtg-tcgtgtcggtgtcagacacgacacg 188  Q
    |||||||||||||||| ||||  |||||||||| |   |||||||||||||||||| ||| || | ||| ||||||  |||||||||||||||||    
T  36635308 cggacactgacacgccaacaccactaataatttga--gaaaatcacataattcagtgtaattatatgtgttcgtgtgagtgtcagacacgacacg 36635400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 24343489 - 24343576
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacac 182  Q
    ||||||| | ||||||||||||| | ||||||||| |   ||||| |||||||||||| ||| || | |||||||||||||||| |||||    
T  24343489 cacggacgccgacacgccgacacggataataatttgag--aaaattacataattcagtgtaattataggtgtcgtgtcggtgtccgacac 24343576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 35158062 - 35157991
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||| || ||||||||||    ||||||||||||||| ||| ||| || ||||||||    
T  35158062 cacggacactgacacgccgacgcaactaataattt--ggaaaaatcacataatttagtgtaattataagtgtcg 35157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 12708132 - 12708200
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||| |||||| ||||||||||  | |||||| | |||||||||| ||| |||||||||||    
T  12708132 gacactgacacgcagacacaactaataattttta-aaaaatgaaataattcagtgtaattacaagtgtcg 12708200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 24543967 - 24544000
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaa 130  Q
    |||||||||||||||||||| |||||||||||||    
T  24543967 gacactgacacgccgacacaactaataatttaaa 24544000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 12895351 - 12895227
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    |||| ||| |||||||||||||||  ||||||||| |  |||||||||||||||  || ||| || ||     ||||||||||| ||||||||| |||||    
T  12895351 cacgaacaatgacacgccgacacaaataataatttga--aaaaatcacataattttgtgtaattataa-----gtgtcggtgtcggacacgacatgtatc 12895259  T
Q  193 cgacaacaggacatgtataattcgaggagtgt 224  Q
    ||||| | ||||| |  |||| ||||||||||    
T  12895258 cgacatcgggacacgcctaatccgaggagtgt 12895227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 15382459 - 15382593
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtat 191  Q
    |||||||| |||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||| ||||||||||  |||||||||| | |    
T  15382459 cacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcggtgttggacacgacacatgt 15382558  T
Q  192 ccgacaacaggacatgtataattcgaggagtgtca 226  Q
    |||||| | ||||| |  |||| ||||||||||||    
T  15382559 ccgacaccgggacacgcctaatccgaggagtgtca 15382593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 31084309 - 31084435
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg-tgtcggtgtcagacacgacacgtatccga 195  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||||||||| | ||| ||||||||||| |||| ||||| |||||||||||| |||||    
T  31084309 gacactgacacgccgacacagctaataatttga--aaaaatcacataattcaatgtaattacaagtgtcgatgtc-gtgtcggacacgacacgtgtccga 31084405  T
Q  196 caacaggacatgtataattcgaggagtgtc 225  Q
    ||   |||||||  |||| |||||||||||    
T  31084406 cactgggacatgcctaatccgaggagtgtc 31084435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 39698524 - 39698631
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacacgacac 187  Q
    |||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||| ||| ||||      ||||||||||||||||| |||||||||     
T  39698524 acggacactgacacgctgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacat 39698621  T
Q  188 gtatccgaca 197  Q
    ||||||||||    
T  39698622 gtatccgaca 39698631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 21522732 - 21522837
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 186  Q
    ||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||| ||| |||||      |||||||||||||||| |||||||||    
T  21522732 cacggacactgacacgccgacacagctaataatttta--aaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgaca 21522829  T
Q  187 cgtatccg 194  Q
    ||| ||||    
T  21522830 cgtgtccg 21522837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 21533298 - 21533403
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 186  Q
    ||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||| ||| |||||      |||||||||||||||| |||||||||    
T  21533298 cacggacactgacacgccgacacagctaataatttta--aaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgaca 21533395  T
Q  187 cgtatccg 194  Q
    ||| ||||    
T  21533396 cgtgtccg 21533403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 14674251 - 14674322
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||| ||| |||||||||||    
T  14674251 cacggacactgacacgccgacacagctaataatttga--aaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 21191133 - 21191062
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||| ||| |||||||||||    
T  21191133 cacggacactgacatgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcg 21191062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 13287476 - 13287405
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| ||||| |||||||| ||||||||| ||  |||||||||||||||||| |||||||||||||||    
T  13287476 cacggacactaacacgtcgacacagataataatttgaa--aaaatcacataattcagtgtaactacaagtgtcg 13287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 42893345 - 42893447
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccga 195  Q
    |||||| ||||| ||||||||||||||||||| ||  ||||||||||||| |||| ||| |||||||||     ||||||||||||| |||||| |||||    
T  42893345 ggacacggacacaccgacacagctaataatttgaa--aaaatcacataatccagtgtaattacaagtgt-----cggtgtcagacacaacacgtgtccga 42893437  T
Q  196 caacaggaca 205  Q
    || |||||||    
T  42893438 caccaggaca 42893447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 6247609 - 6247675
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||| |||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 6247675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 15883982 - 15884041
Alignment:
Q  106 acgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  15883982 acgccgacacagcaaataatttaaa-aaaaatcacataattcagtgtaattacaagtgtcg 15884041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 4105239 - 4105310
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||||| ||||||||||||||| | |||||||||| || ||| ||||||||||||||| ||| |||||||||    
T  4105239 cacggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 33178014 - 33178078
Alignment:
Q  100 actgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||| ||| ||| |||||||||||    
T  33178014 actgacacgccgacacaactaataatttaa--aaaaatcacataatttagtgtaattacaagtgtcg 33178078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 21576822 - 21576751
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||| ||||||| ||||| |||||||||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  21576822 cacgaacactgatacgccaacacagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 7218334 - 7218273
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||| ||||| |||||||||||||||||||  |||||||||||||| ||| |||||||||||    
T  7218334 gacacgtcgacagagctaataatttaaataaa--tcacataattcagtgtaattacaagtgtcg 7218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 21542016 - 21542120
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgta 190  Q
    |||| ||||| ||||||||| ||||||||||||  ||| || |||||||||||| ||| |||||      |||||||||||||||| ||||||||||||     
T  21542016 gacattgacatgccgacacaactaataatttaa--aaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtg 21542113  T
Q  191 tccgaca 197  Q
    |||||||    
T  21542114 tccgaca 21542120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 21351991 - 21351911
Alignment:
Q  84 cctaagaagcacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||| |||||| |||||||||||| |||||||| |||||||||  |  |||| |||||||||||||| ||| |||||||||||    
T  21351991 cctatgaagcatggacactgacacaccgacacaactaataattgga--aaaagtcacataattcagtgtaattacaagtgtcg 21351911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 19552620 - 19552569
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataatt 146  Q
    ||||||||||||||||||||||||| ||||||||| |  |||||||||||||||    
T  19552620 cacggacactgacacgccgacacagttaataatttga--aaaaatcacataatt 19552569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 19579683 - 19579754
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||| |||||||||||||||||||||| |   |||||||||||||| |||  || |||||||||||    
T  19579683 cacggacactgatacgccgacacagctaataatttga--gaaaatcacataatttagtgcaattacaagtgtcg 19579754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 22013396 - 22013430
Alignment:
Q  93 cacggacactgacacgccgacacagctaataattt 127  Q
    |||||||||||||||||||||||||||||||||||    
T  22013396 cacggacactgacacgccgacacagctaataattt 22013430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 22299557 - 22299492
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaag 161  Q
    |||||| | |||||| ||||||||||||||||||||   ||||||||||| ||||||||||| ||||||    
T  22299557 cacggatattgacacaccgacacagctaataattta---aaaaatcacatgattcagtataattacaag 22299492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 24906378 - 24906307
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||| ||||||||||||| |||||| ||||||||| ||  ||||| |||||||||||| ||| |||||||||||    
T  24906378 cacgaacactgacacgccaacacagataataatttgaa--aaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 5468017 - 5467961
Alignment:
Q  133 aaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgt 189  Q
    |||||||||||||||||| ||| || | ||||||||||||||||| | |||||||||    
T  5468017 aaaatcacataattcagtgtaattataggtgtcgtgtcggtgtcacatacgacacgt 5467961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 8420011 - 8420080
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||| ||||||||||||| |||||||||||| |  |||||| |||||||||| | ||| |||||||||||    
T  8420011 cggacaatgacacgccgacatagctaataatttga--aaaaataacataattcaatgtaattacaagtgtcg 8420080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 15410525 - 15410489
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaa 129  Q
    ||||||||||||||||||||||| |||||||||||||    
T  15410525 cacggacactgacacgccgacaccgctaataatttaa 15410489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 43001782 - 43001851
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||||||||||||| | |||||| ||||||||||| |  |||||| |||||||||||| ||| |||||||||    
T  43001782 cacggacactgacatgtcgacactgctaataatttga--aaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 2952268 - 2952306
Alignment:
Q  111 gacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  2952268 gacacagctaataatttaaa-aaaaatcacataattcagt 2952306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 12641657 - 12641756
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacacgacac 187  Q
    ||||||| ||||||| ||||| || |||||||||||  ||||||||||||||| ||||||| | ||      |||||||||| |||||||||||| ||||    
T  12641657 acggacaatgacacgtcgacatagttaataatttaa--aaaaatcacataatttagtataattgcacgtgtcagtgtcgtgttggtgtcagacacaacac 12641754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 30135305 - 30135367
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||| |||||||||| || ||||||||||||| ||| | ||| |||||||||||    
T  30135305 gacacgccgacacaactaataatttgaa-aaaaatcacataactcattgtaattacaagtgtcg 30135367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 6770525 - 6770580
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    ||||||||||||||| | |||||| ||||||||||||   ||||||||||||||||||    
T  6770525 cacggacactgacacactgacacaactaataatttaa--gaaaatcacataattcagt 6770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 36642839 - 36642805
Alignment:
Q  93 cacggacactgacacgccgacacagctaataattt 127  Q
    ||||||||||||||||||||||||| |||||||||    
T  36642839 cacggacactgacacgccgacacagttaataattt 36642805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 37328921 - 37328850
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||| || |||||||||| ||||||||   ||||||||||| |||||||| ||| |||| ||||||    
T  37328921 cacggacactgatacaccgacacagcaaataattt--gtaaaaatcacaaaattcagtgtaattacatgtgtcg 37328850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 6326374 - 6326304
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    ||||||||||||||||||||||  |||| |||||| |   ||||| |||||||||||| ||| ||||||||||    
T  6326374 cacggacactgacacgccgacatcgctagtaatttga--gaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 7677681 - 7677742
Alignment:
Q  89 gaagcacggacactgacacg--ccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||| || ||||||  ||||||||||||||||||| |  |||||||||||||||||||    
T  7677681 gaagcacggaaacggacacggaccgacacagctaataatttga--aaaaatcacataattcagt 7677742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 14422889 - 14422939
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||||| |||| |||||||||||||    ||||||||||||||||||||    
T  14422889 ggacactgacacaccgatacagctaataatt----taaaaatcacataattcagt 14422939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 10298553 - 10298622
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| ||||||||||||| |||||||||| |  |||| ||||||||| || | ||| |||||||||||    
T  10298553 cggacactaacacgccgacacaactaataatttga--aaaagtcacataatacaatgtaattacaagtgtcg 10298622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 17177098 - 17177029
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| ||||| |||||||||||||||| |  |||||||| | |||||| | ||| |||||||||||    
T  17177098 cggacactgatacgccaacacagctaataatttga--aaaaatcaaaaaattcattgtaattacaagtgtcg 17177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 41995457 - 41995506
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattca 148  Q
    |||||||||||||||||||| |||||||||  |  |||||||||||||||||    
T  41995457 gacactgacacgccgacacaactaataattcga--aaaaatcacataattca 41995506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 51793 - 51890
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||||||  |||||||||||||||||| |||| ||    
T  51793 cacggacactgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgt--tgtcggtgtcagacacgatacgtgtc 51888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 24339627 - 24339758
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgt 189  Q
    ||||| |||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||      |||||||||||||||| ||||||||||||    
T  24339627 ggacattgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgt 24339724  T
Q  190 atccgacaacaggacatgtataattcgaggagtg 223  Q
    |||||||| | ||||| |  |||| |||||||||    
T  24339725 atccgacaccgggacacgcctaatccgaggagtg 24339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 239
Target Start/End: Complemental strand, 43027546 - 43027402
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtat 191  Q
    |||||||||||||||| |||| ||||||||||||| |  |||||||||||||| |||| ||| |||||||||| ||||| |||||||||||||||||| |    
T  43027546 cacggacactgacacggcgacccagctaataatttga--aaaaatcacataatgcagtgtaaatacaagtgtcggtgtc-gtgtcagacacgacacgtgt 43027450  T
Q  192 ccgacaacaggacatgtataattcgaggagtgtcatttcttcatagcc 239  Q
    |||||| | ||||| |  |||| ||| |||||||  | ||||||||||    
T  43027449 ccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatagcc 43027402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 13770673 - 13770775
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg-tgtcggtgtcagacacgacacgtat 191  Q
    |||||||||||| ||||||||||||||||||||||||  |||||| |||||||||||| ||| ||||||||||| |||| ||||| ||||| |||||| |    
T  13770673 cacggacactgatacgccgacacagctaataatttaa--aaaaattacataattcagtgtaattacaagtgtcgttgtc-gtgtcggacacaacacgtgt 13770769  T
Q  192 ccgaca 197  Q
    ||||||    
T  13770770 ccgaca 13770775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 21864788 - 21864928
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    ||||||||| ||||| | ||||||||||||||||| || |||||||| |||||| ||| ||| |||||||||||      |||| |||||||||||| ||    
T  21864788 cacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtcgc-----tgtcggacacgacacgtgtc 21864882  T
Q  193 cgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 238  Q
    ||||| | ||||| || ||||||||||||||||  | |||||||||    
T  21864883 cgacaccgggacacgtctaattcgaggagtgtctgtgcttcatagc 21864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 5409910 - 5409783
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtatccg 194  Q
    |||||||||||||| || |||||||||||||| |  |||||||||||||||||||  || |||||||||| ||||| ||||| |||||||||||| ||||    
T  5409910 ggacactgacacgctgatacagctaataatttga--aaaaatcacataattcagtgcaattacaagtgtcggtgtc-gtgtcggacacgacacgtgtccg 5409814  T
Q  195 acaacaggacatgtataattcgaggagtgtc 225  Q
    ||| | ||||| |  |||| |||||||||||    
T  5409813 acaccgggacacgcctaatccgaggagtgtc 5409783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 11061153 - 11061082
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||| ||||||||||||||||||| |  ||||||||||||||| ||||||| |||||||||||    
T  11061153 cacggacactgacacaccgacacagctaataatttga--aaaaatcacataatttagtataattacaagtgtcg 11061082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 96 - 225
Target Start/End: Original strand, 15680794 - 15680916
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccga 195  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||||||| ||| ||| || ||     ||||||||||| |||||||||||| |||||    
T  15680794 ggacactgacacgccgacatagctaataatt--aaaaaaaatcacataatttagtgtaattataa-----gtgtcggtgtcggacacgacacgtgtccga 15680886  T
Q  196 caacaggacatgtataattcgaggagtgtc 225  Q
    || |  |||| || ||||||||||||||||    
T  15680887 caccgagacacgtctaattcgaggagtgtc 15680916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 25481887 - 25481953
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    ||||| |||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||||||    
T  25481887 ggacaatgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 13557817 - 13557750
Alignment:
Q  97 gacactgacacgccgacacagctaataattt-aaataaaaatcacataattcagtataactacaagtg 163  Q
    |||||||||||||||||| | |||||||||| ||| ||||||||||||||||||| ||| ||||||||    
T  13557817 gacactgacacgccgacaaaactaataatttaaaaaaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 21560484 - 21560556
Alignment:
Q  97 gacactgacacgccgacacagctaataattt---aaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||| ||||||||||||||    || ||||||||||||||||||| ||| |||||||||||    
T  21560484 gacactgacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattacaagtgtcg 21560556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 24105660 - 24105731
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||  ||| ||||||| ||| |||||||||||    
T  24105660 cacggacactgacacgccgacacagctaataatttga--aaaaattgcatgattcagtgtaattacaagtgtcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 9778500 - 9778584
Alignment:
Q  111 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtatccgaca 197  Q
    ||||||||| ||||||| ||  |||||||||||||||||||||| |||||||||| ||||| ||||| ||||| |||||| |||||||    
T  9778500 gacacagctgataatttgaa--aaaatcacataattcagtataattacaagtgtcggtgtc-gtgtcggacacaacacgtgtccgaca 9778584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 32094093 - 32093995
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtatccgac 196  Q
    ||||| ||| ||| ||||| |||||||||| || ||||||||||||||||||| ||| ||||| |||| ||||| ||||| |||||||||||| ||||||    
T  32094093 acactaacatgccaacacaactaataatttgaa-aaaaatcacataattcagtgtaattacaaatgtcggtgtc-gtgtcggacacgacacgtgtccgac 32093996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 43249975 - 43250056
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtc 176  Q
    ||||||||||||||||||||||| | ||||||||| |   ||||| ||||||| |||| ||| || ||||||||||||||||||    
T  43249975 cacggacactgacacgccgacacggataataatttga--gaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtc 43250056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 225
Target Start/End: Original strand, 7438693 - 7438824
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg------tgtcggtgtcagacacgacacgtat 191  Q
    ||||||||| |||||||||| ||||||||| ||  |||||||||||||||| | ||| |||||||||||      ||||||||||| ||||||||| | |    
T  7438693 acactgacatgccgacacagttaataatttgaa--aaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgt 7438790  T
Q  192 ccgacaacaggacatgtataattcgaggagtgtc 225  Q
     |||||  |||||| |  |||||| |||||||||    
T  7438791 gcgacactaggacacgcctaattcaaggagtgtc 7438824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 3991322 - 3991377
Alignment:
Q  109 ccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| |||||||||| ||  |||||||||||||||||||||| |||||||||||    
T  3991322 ccgacacaactaataatttgaa--aaaatcacataattcagtataattacaagtgtcg 3991377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 7197370 - 7197303
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||| ||||||||||||||||||||||||||||  ||||||||  ||||||| | ||| |||||||||||    
T  7197370 gacattgacacgccgacacagctaataatttaa--aaaaatcatttaattcaatgtaattacaagtgtcg 7197303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 18215263 - 18215192
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| |||||||||| ||||||||||||| |  |||||||||||||| |||| ||  |||||||||||    
T  18215263 cacggacactaacacgccgacgcagctaataatttga--aaaaatcacataatgcagtgtagttacaagtgtcg 18215192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 27945023 - 27945094
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||||||  |||||||||| |   ||||| |||||||||||| ||| |||||||||||    
T  27945023 cacggacactgacacgccgacaccactaataatttga--gaaaattacataattcagtgtaattacaagtgtcg 27945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 2334238 - 2334303
Alignment:
Q  101 ctgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| ||||| || ||||||||| || ||||||||||||||| ||| ||| |||||||||||    
T  2334238 ctgacacggcgacaaagttaataatttgaaaaaaaatcacataatttagtgtaattacaagtgtcg 2334303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 12010060 - 12010023
Alignment:
Q  90 aagcacggacactgacacgccgacacagctaataattt 127  Q
    |||||||||||||||||||| |||||||||||||||||    
T  12010060 aagcacggacactgacacgctgacacagctaataattt 12010023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 9933326 - 9933389
Alignment:
Q  160 agtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgt 224  Q
    ||||||||||||||||| |||||||||| | || ||| ||| ||||||||||||| |||||||||    
T  9933326 agtgtcgtgtcggtgtcggacacgacacatgtctgac-acaagacatgtataatttgaggagtgt 9933389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 21930614 - 21930681
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||| ||||||||||||||   |||||| | |||||||| | ||| |||||||||||    
T  21930614 ggacactgacacgccgactcagctaataattta---aaaaattagataattcattttaattacaagtgtcg 21930681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 25822647 - 25822708
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||| |||||||||| || |||||||||  |||||||| ||| |||||||||||    
T  25822647 gacacgccgacacaactaataatttgaaaaaaaatcac--aattcagtgtaattacaagtgtcg 25822708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 26033516 - 26033432
Alignment:
Q  115 cagctaataatttaaataaaaatcacataattcagtataactacaagtg------tcgtgtcggtgtcagacacgacacgtatccga 195  Q
    ||||||||||||| ||  |||||||||||||||||| ||| ||||||||      |||||||||||||||||| ||||||| |||||    
T  26033516 cagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccga 26033432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 11665508 - 11665409
Alignment:
Q  102 tgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg------tgtcggtgtcagacacgacacgtatccga 195  Q
    |||||||| |||||| |||||||||| ||  |||||||||||||||||| ||| || ||||||||      ||||||||||  ||||||||||| |||||    
T  11665508 tgacacgctgacacaactaataatttgaa--aaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccga 11665411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 32308105 - 32308157
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  32308105 ggacactgacacgccgacaccgctaataatttga--gaaaatcacataattcagt 32308157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 9408407 - 9408340
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||| ||||||||  ||||||||| ||  |||||||||||||| ||| ||| |||||||||||    
T  9408407 gacactgacacaccgacacaattaataatttgaa--aaaatcacataatttagtgtaattacaagtgtcg 9408340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 26733286 - 26733341
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||||||||| |||||| ||||||||||| |   ||||||||||||||||||    
T  26733286 cacggacactgacacgtcgacaccgctaataatttga--caaaatcacataattcagt 26733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 598256 - 598329
Alignment:
Q  166 gtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtcatttcttcatagcc 239  Q
    |||||||||||||||||||||||| ||||||| | ||||| |  |||| |||| ||||||  | ||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagcc 598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 5938492 - 5938541
Alignment:
Q  133 aaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacac 182  Q
    ||||| |||||||||||||||| || | |||| |||||||||||||||||    
T  5938492 aaaataacataattcagtataattataggtgttgtgtcggtgtcagacac 5938541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 11722175 - 11722121
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcag 149  Q
    ||||||||||||||||||||||| ||||| ||||| |   |||||||||||||||||    
T  11722175 cacggacactgacacgccgacaccgctaacaatttga--gaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 18038981 - 18039052
Alignment:
Q  97 gacactgacacgccgacacagctaataat--ttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||  |||||||| ||||||||  ||  | ||||||||||||||||||| ||| |||||||||||    
T  18038981 gacactgacattccgacacaactaataataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 18039052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 24645466 - 24645588
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 196  Q
    |||||||||| | |||||||||||||||||| || ||||||||||||||||||||||  |||||     |||||||||||||||||||||||| ||||||    
T  24645466 gacactgacatgtcgacacagctaataatttgaa-aaaaatcacataattcagtatagttacaa-----gtgtcggtgtcagacacgacacgtgtccgac 24645559  T
Q  197 aacaggacatgtataattcgaggagtgtc 225  Q
    | || |||| || |||| ||| |||||||    
T  24645560 accaagacacgtctaatccgaagagtgtc 24645588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 189
Target Start/End: Original strand, 12696306 - 12696400
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgt 189  Q
    ||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||| ||| |||||||||| ||||| ||||| ||||||||||||    
T  12696306 cacggacactgacacgccgacacagctaataatttga--aaaaattacataattcagtgtaattacaagtgtcagtgtc-gtgtcggacacgacacgt 12696400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 16766682 - 16766787
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgt 189  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||      |||||||||||||||| ||||| ||||||    
T  16766682 ggacactgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgt 16766779  T
Q  190 atccgaca 197  Q
     |||||||    
T  16766780 gtccgaca 16766787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 28152081 - 28152204
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    |||||||||||||||||||||| ||||||||||||    ||||||||||||||||||| ||| |||||     ||||||||||| |||||||||||| ||    
T  28152081 cacggacactgacacgccgacaaagctaataattt---gaaaaatcacataattcagtgtaattacaa-----gtgtcggtgtcggacacgacacgtgtc 28152172  T
Q  193 cgacaacaggacatgtataattcgaggagtgt 224  Q
    ||||| | ||||| |  |||| ||||||||||    
T  28152173 cgacaccgggacaggcctaatccgaggagtgt 28152204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 10770748 - 10770659
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacac 187  Q
    ||||||||||||||| ||||| |||||||||| ||  |||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||    
T  10770748 ggacactgacacgccaacacaactaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcggtgtc-gtgtcagacacgacac 10770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 27904114 - 27904042
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||||||| ||| ||||| |||||    
T  27904114 acggacattgacacgccgacatagctaataatttaaaaaaaaaacacataattcagtgtaattacaaatgtcg 27904042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 17841666 - 17841598
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtg 163  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||| ||| ||||||||    
T  17841666 cacggacactgacacgccgacacagctaataatttga--aaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 9107447 - 9107376
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| |||||||||||||||||||||||| |  |||||||||| |||||||| ||| |||||||||||    
T  9107447 cacggacactaacacgccgacacagctaataatttga--aaaaatcacaaaattcagtgtaattacaagtgtcg 9107376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 34595116 - 34595187
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| ||||||||||||||| |||||||||| |  ||||||||||||||||||| ||| |||||||||||    
T  34595116 cacggacaatgacacgccgacacaactaataatttga--aaaaatcacataattcagtgtaattacaagtgtcg 34595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 103 - 237
Target Start/End: Original strand, 8713971 - 8714110
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgtatccgac 196  Q
    |||||| |||||||| ||||||||| || ||||||||||||||||||| ||| |||||      |||||||||||||||| |||||||||| | ||||||    
T  8713971 gacacgtcgacacagttaataatttgaa-aaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgac 8714069  T
Q  197 aacaggacatgtataattcgaggagtgtcatttcttcatag 237  Q
    | | ||||| |   ||| ||||||||||| || ||||||||    
T  8714070 atcgggacacgcccaatccgaggagtgtctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 16833294 - 16833395
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 196  Q
    |||||||||||||||||||| |||||||||| |  |||||||||||| |||||| ||| |||||     |||||||||| ||||||||||||  ||||||    
T  16833294 gacactgacacgccgacacaactaataatttga--aaaaatcacatacttcagtgtaattacaa-----gtgtcggtgttagacacgacacgcgtccgac 16833386  T
Q  197 aacaggaca 205  Q
    | |||||||    
T  16833387 accaggaca 16833395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 3209367 - 3209446
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtc 176  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||| ||| | | |||||||||| |||||||||||    
T  3209367 gacacagacacgccgacacagctaataatttgaa-aaaaatcacataatttagtgttattacaagtgtcggtgtcggtgtc 3209446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 4877924 - 4878049
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    |||||| | |||||| ||||||||||||||||||| || |||| |||||||||| ||||||| |||||     ||||||||||| |||||||||| | ||    
T  4877924 cacggatagtgacacaccgacacagctaataatttgaa-aaaagtcacataattaagtataattacaa-----gtgtcggtgtcggacacgacacatgtc 4878017  T
Q  193 cgacaacaggacatgtataattcgaggagtgtc 225  Q
    |||| |||||||| |  |||| |||||||||||    
T  4878018 cgac-acaggacacgcctaatccgaggagtgtc 4878049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 8365596 - 8365488
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 186  Q
    |||||||||||||||||||||||| |||||||||| |  ||| |||||||||||| || ||| |||||      ||||||||||||| || |||||||||    
T  8365596 cacggacactgacacgccgacacaactaataatttga--aaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgaca 8365499  T
Q  187 cgtatccgaca 197  Q
    ||| |||||||    
T  8365498 cgtgtccgaca 8365488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 8777050 - 8776981
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||||||||||||||||||||||| |||||||||| |  |||||||||| |||||||| ||| |||||||||    
T  8777050 cacggacactgacacgccgacacaactaataatttga--aaaaatcacaaaattcagtgtaattacaagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 7977900 - 7977836
Alignment:
Q  100 actgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||||||||||| |  |||||| |||||||||||| ||| |||||||||||    
T  7977900 actgacacgccgacacagctaataatttga--aaaaattacataattcagtgtaattacaagtgtcg 7977836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 426591 - 426520
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| | | ||| |||||||||||    
T  426591 cacggacactgacacgccgacacagttaataatttga--aaaaatcacataattaaatgtaattacaagtgtcg 426520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 9658861 - 9658916
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    ||||||||||||||||||||||| |||||||||||||   ||||||||||||||||||    
T  9658861 cacggacactgacacgccgacaccgctaataatttaa--gaaaatcacataattcagt 9658916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 31959141 - 31959212
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||| |||||||||||||| ||||||||||||||| |  |||||||||||||| |||| ||| |||||||||||    
T  31959141 cacgaacactgacacgccgtcacagctaataatttga--aaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 225
Target Start/End: Complemental strand, 32978967 - 32978851
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgacaacagg 202  Q
    ||||||||||||||||||||||||| || ||||| ||||||||| ||| ||| |||||     ||||||||||| |||||||||| | ||||||| | ||    
T  32978967 gacacgccgacacagctaataatttgaa-aaaaaacacataattaagtgtaattacaa-----gtgtcggtgtcggacacgacacatgtccgacaccggg 32978874  T
Q  203 acatgtataattcgaggagtgtc 225  Q
    ||| || |||| | |||||||||    
T  32978873 acacgtctaatccaaggagtgtc 32978851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 5000632 - 5000568
Alignment:
Q  160 agtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgt 224  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||| || |||| ||| ||||||    
T  5000632 agtgtcatgtcggtgtcagacacgacacatatccgacaccaggacacgtctaatccgaagagtgt 5000568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 5970181 - 5970077
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgta 190  Q
    ||||| |||||| |||||||| ||||||||| ||  |||||||||||||||||| ||| |||||      |||||||||||||||| |||||||||| |     
T  5970181 gacacggacacgtcgacacagttaataatttgaa--aaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatt 5970084  T
Q  191 tccgaca 197  Q
    |||||||    
T  5970083 tccgaca 5970077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 17302538 - 17302609
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||| |||||||||||| |||||| |||||||||| || ||||||||||||||||| | ||| ||||||||||    
T  17302538 cacgaacactgacacgctgacacaactaataatttgaa-aaaaatcacataattcaatgtaattacaagtgtc 17302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 3398601 - 3398655
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||||||||||||||||||||||||||||    |||||||| ||||||||||    
T  3398601 cacggacactgacacgccgacacagctaataattt---gaaaaatcatataattcagt 3398655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 7938101 - 7938169
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||||||||||||||| |  |||||||| |||||| ||| ||| || ||||||||    
T  7938101 ggacactgacacgccgacacagctaataatttga--aaaaatcatataatttagtgtaattataagtgtcg 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 31429076 - 31429015
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa 160  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||||||||| ||| |||||    
T  31429076 gacactgacacgcc-acccagctaataatttaaa-aaaaatcacataattcagtgtaattacaa 31429015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 9911587 - 9911534
Alignment:
Q  112 acacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||| | ||||||||||||||||| ||| |||||||||||    
T  9911587 acacagctaataatttaaa-agaaatcacataattcagtgtaattacaagtgtcg 9911534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 1681745 - 1681811
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||| ||||||||||||| |||||||||| ||  |||||||| ||||||||| ||| |||||||||||    
T  1681745 acactaacacgccgacacaactaataatttgaa--aaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 7801228 - 7801162
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||| ||||||||||||| |||||||||| ||  |||||||||||||||||  ||| |||||||||||    
T  7801228 acactaacacgccgacacaactaataatttgaa--aaaatcacataattcagcgtaattacaagtgtcg 7801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 17435181 - 17435250
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||||||||||| ||| ||||| |||||||||||| |  |||||| |||||||||||| ||| |||||||||    
T  17435181 cacggacactgatacgtcgacatagctaataatttta--aaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 853928 - 853865
Alignment:
Q  101 ctgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||| |||||||||| |  ||||||||||||||| |||  || |||||||||||    
T  853928 ctgacacgccgacacaactaataatttga--aaaaatcacataattaagtgcaattacaagtgtcg 853865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 9027160 - 9027194
Alignment:
Q  93 cacggacactgacacgccgacacagctaataattt 127  Q
    ||||||||||||||||||||||| |||||||||||    
T  9027160 cacggacactgacacgccgacaccgctaataattt 9027194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 9522898 - 9522944
Alignment:
Q  118 ctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||  |||||||||||||||||| ||| |||||||||||    
T  9522898 ctaataatttaaa--aaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 17341741 - 17341671
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    ||||| ||||||||||||||||| | ||||||||| |   |||||||||||||||||| ||| || |||||||    
T  17341741 cacgggcactgacacgccgacaccgttaataatttga--taaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 23771561 - 23771598
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaa 130  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  23771561 cacggacacggacacgccgacacagttaataatttaaa 23771598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 1191763 - 1191706
Alignment:
Q  107 cgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||| |  |||| ||||| |||||||| ||| |||||||||||    
T  1191763 cgccgacacagctaataatttga--aaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 7265668 - 7265615
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||||||||| |||| ||||||||||| |   ||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttga--gaaaatcacataattcagt 7265615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 24115918 - 24115865
Alignment:
Q  99 cactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataa 154  Q
    ||||||||||| |||||| |||||||||| |  ||||||||||||||||| |||||    
T  24115918 cactgacacgctgacacaactaataatttca--aaaaatcacataattcaatataa 24115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 71709 - 71843
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactac------aagtgtcgtgtcggtgtcagacacgacacgta 190  Q
    ||||||||||||||||||||||||||||||| || |||||||||| |||||||| ||| |||       ||||||||||||||||| ||||| ||||||     
T  71709 gacactgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtg 71808  T
Q  191 tccgacaacaggacatgtataattcgaggagtgtc 225  Q
    ||||||| | ||||| |  |||| |||||||||||    
T  71809 tccgacaccgggacacgactaatccgaggagtgtc 71843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 98 - 225
Target Start/End: Complemental strand, 4987363 - 4987232
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt------cgtgtcggtgtcagacacgacacgtat 191  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||||||      |||||||||||  |||||||||||| |    
T  4987363 acactgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgt 4987266  T
Q  192 ccgacaacaggacatgtataattcgaggagtgtc 225  Q
    |||||| | ||||| |  |||| |||||||||||    
T  4987265 ccgacaccgggacacgcctaatccgaggagtgtc 4987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 238
Target Start/End: Original strand, 27505229 - 27505371
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg-tgtcggtgtcagacacgacacgtatc 192  Q
    ||||| || |||| ||||||||||||||||||||   |||||||||||||||| ||| ||| ||||||||||| ||||| |||| |||||||||||| ||    
T  27505229 acggatacggacaagccgacacagctaataatttt--taaaaatcacataattaagtgtaattacaagtgtcggtgtcg-tgtctgacacgacacgtgtc 27505325  T
Q  193 cgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 238  Q
    ||||| | |||||||  |||| |||||||||||  | |||||||||    
T  27505326 cgacaccgggacatgcctaatccgaggagtgtccgtgcttcatagc 27505371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 21479104 - 21479193
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacac 187  Q
    ||||||||||||||||||||||||||||||| |  |||||||||| |||||||| ||| ||| |||||| ||||||||||| ||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttga--aaaaatcacacaattcagtgtaattactagtgtcggtgtcggtgtcggacacgacac 21479193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 16000089 - 16000022
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||| ||||||||||||  |||||| |||||||||||| |||||||||||||||    
T  16000089 gacactgacacgccgacacaactaataatttaa--aaaaataacataattcagtgtaactacaagtgtcg 16000022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 28917983 - 28918054
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||| ||||||||||||||| |||||||||||| |  ||||||||||||||||||| ||| |||||||||||    
T  28917983 cacggaaactgacacgccgacatagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcg 28918054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 35994811 - 35994738
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcgg 172  Q
    ||||| ||||| |||||||||||||||||||| ||   ||||||||||||||||| ||| |||||||||||||||||    
T  35994811 ggacaatgacaagccgacacagctaataatttgaa---aaatcacataattcagtgtaattacaagtgtcgtgtcgg 35994738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 55401057 - 55401195
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    |||||||||||| ||||||||||| |||||||||| |  ||||||||||||||| ||| ||| |||||     ||||||||||| |||||||||||| ||    
T  55401057 cacggacactgatacgccgacacaactaataatttga--aaaaatcacataatttagtgtaattacaa-----gtgtcggtgtcggacacgacacgtgtc 55401149  T
Q  193 cgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 238  Q
    ||||| |  |||| |  |||| |||||||||||  | |||||||||    
T  55401150 cgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagc 55401195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 10954934 - 10955031
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    |||| ||||||||||||||||||| |||||||||| |  ||||||||||||||||||| |||  ||||     ||||||||||| |||||||||||| ||    
T  10954934 cacgaacactgacacgccgacacaactaataatttga--aaaaatcacataattcagtgtaatcacaa-----gtgtcggtgtcggacacgacacgtgtc 10955026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 14747547 - 14747610
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaag 161  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||| ||| ||| ||||||    
T  14747547 gacactgacacgccgacacagctaataatttgaa-aaaaatcacataatttagtgtaattacaag 14747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 26508099 - 26508163
Alignment:
Q  100 actgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| ||||||||||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  26508099 actgacacgctgacacagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 8587098 - 8587027
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||||||| ||| |||||| |  ||||||||||||||| ||| ||| |||||||||||    
T  8587098 cacggacactgacacgccgacacatctagtaatttga--aaaaatcacataattaagtgtaattacaagtgtcg 8587027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 10268560 - 10268493
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||| ||| ||||||||||    
T  10268560 ggacactgacacgccgacacagttaataatttga--aaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 14209105 - 14209195
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacacgacacgt 189  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||||| ||| ||||      ||||||||||||||||| ||||||||||||    
T  14209105 gacacgccgacacaactaataattttaa--aaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgt 14209195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 34307846 - 34307763
Alignment:
Q  104 acacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgt 189  Q
    |||||| ||||| ||||||||||| |   ||||||||||| |||||| ||| || |||||||||||||||||| ||||||||||||    
T  34307846 acacgctgacaccgctaataatttgag--aaaatcacatatttcagtgtaattataagtgtcgtgtcggtgtcggacacgacacgt 34307763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 21257058 - 21256992
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||| ||||||  ||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||    
T  21257058 acaccgacacgatgacacagctaataatttgaa--aaaatcacataattcagtataattacaagtgtcg 21256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 14832077 - 14832189
Alignment:
Q  89 gaagcacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacac 182  Q
    |||||||||| || |||||||||| |||||||||||||| |  ||||||||||||| ||| | ||| ||||      |||||||||||||| || |||||    
T  14832077 gaagcacggatacggacacgccgatacagctaataatttga--aaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacac 14832174  T
Q  183 gacacgtatccgaca 197  Q
    ||||||| |||||||    
T  14832175 gacacgtgtccgaca 14832189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 40052318 - 40052367
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattca 148  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  40052318 gacactgacacgccgacacagctaataatttga--aaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 14829676 - 14829742
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||   ||| |||||||||||    
T  14829676 gacactgacacgccgacacagctaataattt---gaaaaatcacataattcatggtaattacaagtgtcg 14829742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 225
Target Start/End: Original strand, 28812499 - 28812633
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacac 187  Q
    |||||||| |||||||||||||| |||||||||| |  | ||||||||||||||||| ||  |||||      ||||||||| |||||||||||||| ||    
T  28812499 acggacac-gacacgccgacacaactaataatttga--agaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatac 28812595  T
Q  188 gtatccgacaacaggacatgtataattcgaggagtgtc 225  Q
     | ||||||| ||||||| |  |||| |||||||||||    
T  28812596 atgtccgacagcaggacacgcctaatccgaggagtgtc 28812633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 3865633 - 3865599
Alignment:
Q  93 cacggacactgacacgccgacacagctaataattt 127  Q
    |||||||||||||||||||||||||||||||||||    
T  3865633 cacggacactgacacgccgacacagctaataattt 3865599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 10318111 - 10318077
Alignment:
Q  93 cacggacactgacacgccgacacagctaataattt 127  Q
    |||||||||||||||||||||||||||||||||||    
T  10318111 cacggacactgacacgccgacacagctaataattt 10318077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 10335363 - 10335292
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||||||| |||||||||| |  |||| ||||||| || ||| ||| |||||||||||    
T  10335363 cacggacactgacacgccgacacaactaataatttga--aaaagtcacatattttagtgtaaatacaagtgtcg 10335292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 11610510 - 11610573
Alignment:
Q  100 actgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||||||||| ||  ||||||||||    
T  11610510 actgacacgccaacaccgctaataatttaa--aaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 15796371 - 15796300
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| |||||||||||||||| ||||||||| |  |||||||| |||||||||| ||| ||||| |||||    
T  15796371 cacggacaatgacacgccgacacagttaataatttga--aaaaatcatataattcagtgtaattacaattgtcg 15796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 20503451 - 20503518
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||| | |||||||| |  |||||| |||||||||||| ||| |||||||||||    
T  20503451 gacactgacacgccgacacaacaaataatttga--aaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 25775493 - 25775562
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||| |||||  ||||||||| || || |||||||||||||||| ||| |||||||||||    
T  25775493 ggacactgacacgccaacacatttaataatttgaa-aataatcacataattcagtgtaattacaagtgtcg 25775562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 162
Target Start/End: Complemental strand, 26492282 - 26492215
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagt 162  Q
    |||||||||||||||||||||| |||||||||||| |  |||||||| | |||||||| ||| |||||||    
T  26492282 cacggacactgacacgccgacagagctaataatttga--aaaaatcatacaattcagtgtaattacaagt 26492215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 34185196 - 34185129
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||| |||||||||||||| ||||||||||| ||  ||||||||| |||||||| ||| |||||||||||    
T  34185196 gacagtgacacgccgacacggctaataatttcaa--aaaatcacacaattcagtgtaattacaagtgtcg 34185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 39756222 - 39756289
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||| |  ||||||||||||  |||||||||||||| | ||||| |||||||||||    
T  39756222 gacactgacacgccgacaaaattaataatttaaa--aaaatcacataatttaatataattacaagtgtcg 39756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 14216874 - 14216944
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||||||||||| ||||||| |||||||||| |  ||| |||| |||||||||| ||| ||||||||||    
T  14216874 cacggacactgacacgtcgacacaactaataatttta--aaatatcatataattcagtgtaattacaagtgtc 14216944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 14223003 - 14223073
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||||||||||| ||||||| |||||||||| |  ||| |||| |||||||||| ||| ||||||||||    
T  14223003 cacggacactgacacgtcgacacaactaataatttta--aaatatcatataattcagtgtaattacaagtgtc 14223073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 3164102 - 3164033
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||||||| || |||| |||||||||||||||||| |  ||||||||||||||||||| |||  ||||||||    
T  3164102 cacggacaatggcacgtcgacacagctaataatttga--aaaaatcacataattcagtgtaagaacaagtgt 3164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 24205118 - 24205041
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcgg 172  Q
    ||||||||||||||||||||||| | ||||||||| |   ||||| ||||||| |||| ||| || ||||||||||||||    
T  24205118 cacggacactgacacgccgacacggataataatttga--gaaaatgacataatacagtgtaattataagtgtcgtgtcgg 24205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 25948964 - 25948895
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||||||||||||| ||||| || ||||||||||| |  ||||||||||||||||||| ||| || ||||||    
T  25948964 cacggacactgacatgccgatacggctaataatttga--aaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 34910309 - 34910370
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||||| ||| |||||| ||||    
T  34910309 gacacgccgacacaactaataatttgaa--aaaatcacataattcagtgtaattacaagagtcg 34910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 225
Target Start/End: Complemental strand, 40993409 - 40993287
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 196  Q
    ||||| |||||  |||||| |||||||||||||| ||||||||||||||||||| ||| || |      ||||||||||| |||||||||| | ||||||    
T  40993409 gacacggacacctcgacaccgctaataatttaaa-aaaaatcacataattcagtgtaattata-----tgtgtcggtgtcggacacgacacatgtccgac 40993316  T
Q  197 aacaggacatgtataattcgaggagtgtc 225  Q
    | | ||||| |  |||| |||||||||||    
T  40993315 accgggacacgcctaatccgaggagtgtc 40993287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 51206412 - 51206359
Alignment:
Q  111 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  51206412 gacacagctaataatttgaa--aaaatcacataattcagtgtaaatacaagtgtcg 51206359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 3610619 - 3610687
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgt 167  Q
    |||||||||||||| |||||| |||||||||||  |||||| |||||| ||||| ||| ||| ||||||||    
T  3610619 gacactgacacgccaacacagttaataatttaa--aaaaataacataactcagtgtaattaccagtgtcgt 3610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 5339128 - 5339187
Alignment:
Q  133 aaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    |||||||||||||| | | |||  ||||||||||| |||||||| |||||||||||||||    
T  5339128 aaaatcacataatttaatgtaaaaacaagtgtcgtatcggtgtcggacacgacacgtatc 5339187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 8593136 - 8593190
Alignment:
Q  111 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| ||||||  | ||||||||||||||||||||||| |||||||||||    
T  8593136 gacacagctactaatttgga-aaaaatcacataattcagtataattacaagtgtcg 8593190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 14979166 - 14979218
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    ||||| || ||||||||||||||||||||||| |  |||||||||||||||||||    
T  14979166 ggacaatggcacgccgacacagctaataatttga--aaaaatcacataattcagt 14979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 8383239 - 8383310
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| |||||||||||||| ||||||||||| |   ||||||| |||||||||| ||| || ||||||||    
T  8383239 cacggacattgacacgccgacaccgctaataatttga--gaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 1509539 - 1509592
Alignment:
Q  111 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||| ||  |||||||||||||| ||| ||| |||||||||||    
T  1509539 gacacagctaataatttgaa--aaaatcacataatttagtgtaattacaagtgtcg 1509592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 127
Target Start/End: Complemental strand, 32400780 - 32400748
Alignment:
Q  95 cggacactgacacgccgacacagctaataattt 127  Q
    |||||||||||||| ||||||||||||||||||    
T  32400780 cggacactgacacggcgacacagctaataattt 32400748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 49651853 - 49651792
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||| |||||||| ||||||||||| ||  |||||||||||||||| | ||| |||||||||||    
T  49651853 gacatgccgacacggctaataatttgaa--aaaatcacataattcactgtaattacaagtgtcg 49651792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 1486786 - 1486656
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtat 191  Q
    |||||| |||||||||| ||||||||||||||||| |  ||||||||||||||||||| ||| || ||||||| ||||| ||||| |||||||||||| |    
T  1486786 cacggatactgacacgctgacacagctaataatttga--aaaaatcacataattcagtgtaattataagtgtcggtgtc-gtgtcggacacgacacgtgt 1486690  T
Q  192 ccgacaacaggacatgtataattcgaggagtgtc 225  Q
    |||||| | ||||| |  |||| |||||||||||    
T  1486689 ccgacaccgggacacgcctaatccgaggagtgtc 1486656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 18471280 - 18471353
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| |||| || |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  18471280 cacggacaatgacccgtcgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcg 18471353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 22515974 - 22515867
Alignment:
Q  83 gcctaagaagcacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacac 182  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||| |  ||||||||||||||| ||| ||| |||||     ||||||||||| |||||    
T  22515974 gcctatgaagcacggacacggacacgcagacacagctaataatttga--aaaaatcacataatttagtgtaattacaa-----gtgtcggtgtcggacac 22515882  T
Q  183 gacacgtatccgaca 197  Q
    ||||| |||||||||    
T  22515881 gacacatatccgaca 22515867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 5944267 - 5944336
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||| || ||||||||    
T  5944267 gacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcg 5944336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 31694785 - 31694716
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| ||| ||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  31694785 gacactgatacgtcgacatagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcg 31694716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 46348460 - 46348363
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||| |||||| ||| ||| |||||     ||||||||||| |||||||||||| ||    
T  46348460 cacggacactgacacgccgacacagctaataatttga--aaaaatcatataatttagtgtaattacaa-----gtgtcggtgtcggacacgacacgtgtc 46348368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 18556533 - 18556425
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 186  Q
    ||||||||||||||||||||||||||||||||||| |  ||| ||||||||||| | | ||| |||||      |||||||| ||||||||||| |||||    
T  18556533 cacggacactgacacgccgacacagctaataatttga--aaatatcacataatttaatgtaattacaagtattggtgtcgtgacggtgtcagacccgaca 18556436  T
Q  187 cgtatccgaca 197  Q
    |||||||||||    
T  18556435 cgtatccgaca 18556425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 51410016 - 51410104
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgaca 197  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||| ||| |||||||||     ||||||| ||||||||||||||||||||    
T  51410016 gacatgccgacacatctaataatttgaa-aaaaatcacataattcagtgtaattacaagtgt-----cggtgtcggacacgacacgtatccgaca 51410104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 6427447 - 6427516
Alignment:
Q  97 gacactgacacgccgacacagctaataattt-aaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||    
T  6427447 gacactgacatgccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtc 6427516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 113289 - 113350
Alignment:
Q  101 ctgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||||||    
T  113289 ctgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 47989484 - 47989615
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgta 190  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||||||||||| ||| |||||      |||||||||||||||| |||||||||| |     
T  47989484 gacactgacacgccgacacaa-taataatttaaa--aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatg 47989580  T
Q  191 tccgacaacaggacatgtataattcgaggagtgtc 225  Q
    || |||| | ||||| |  |||| |||||||||||    
T  47989581 tctgacatcgggacacgcctaatccgaggagtgtc 47989615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 13011293 - 13011223
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||| ||||||||| |||||||||||||||||||| || ||||||||||||||| ||| ||| |||||||||    
T  13011293 cacgaacactgacatgccgacacagctaataatttgaa-aaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 225
Target Start/End: Original strand, 37598816 - 37598938
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccg 194  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||| |||||||| ||| || ||     ||||||||||| |||||||||||| ||||    
T  37598816 cggacactgacacgccgacacaactaataatttga--aaaaatcaca-aattcagtgtaattataa-----gtgtcggtgtcggacacgacacgtgtccg 37598907  T
Q  195 acaacaggacatgtataattcgaggagtgtc 225  Q
    ||||  ||||| |  |||| |||||||||||    
T  37598908 acaatgggacacgcctaatccgaggagtgtc 37598938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 398842 - 398787
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    ||||||||||||||||||||||| ||||||||||| |  |||||||||||||||||||    
T  398842 cacggacactgacacgccgacaccgctaataatttga--aaaaatcacataattcagt 398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 22881689 - 22881622
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||| |||||||||| |  ||||||||||||||| ||| ||| |||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttga--aaaaatcacataatttagtgtaattacaagtgtcg 22881622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 38078738 - 38078667
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||| ||||||||||| |||||||||||||||||| |  ||||||||||||||||| | ||| |||||||||||    
T  38078738 cacgaacactgacacgtcgacacagctaataatttga--aaaaatcacataattcaatgtaattacaagtgtcg 38078667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 42359526 - 42359455
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||| |||||| |||||||||| |  |||||||||| |||||||| ||| |||||||||||    
T  42359526 cacggacactgacacgctgacacatctaataatttga--aaaaatcacaaaattcagtgtaattacaagtgtcg 42359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 48450664 - 48450593
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||| |||||||||||||||| |  |||||| |||||||| ||| ||| |||||||||||    
T  48450664 cacggacactgacacgccaacacagctaataatttga--aaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 1815240 - 1815310
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||||||  |||| |||| ||  |||||||||||||||||| ||| |||||||||||    
T  1815240 acggacactgacacgccgacacaaataattattttaa--aaaatcacataattcagtgtaattacaagtgtcg 1815310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 19058924 - 19058862
Alignment:
Q  102 tgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||||||||  ||| || |||||||||||| ||| |||||||||||    
T  19058924 tgacacgccgacacagctaataatttaa--aaagataacataattcagtgtaattacaagtgtcg 19058862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 40258973 - 40258885
Alignment:
Q  132 aaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtc 225  Q
    ||||||||||||||||||| ||| |||||||||||     |||||||||||||||| | ||||||| ||||||| |  |||| |||||||||||    
T  40258973 aaaaatcacataattcagtgtaattacaagtgtcg-----gtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtc 40258885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 9103624 - 9103692
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||| ||| |||||||||||    
T  9103624 cggacactgacacgccgacacagttaataatttga--aaaaatcacataatttagtttaa-tacaagtgtcg 9103692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 9828098 - 9828162
Alignment:
Q  161 gtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtc 225  Q
    |||||||||| |||||||||||||||||| ||||||| | ||||| || |||| |||||||||||    
T  9828098 gtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtc 9828162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 31672969 - 31672905
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagt 162  Q
    |||||||||||| ||||||||||||||||||| |  ||||||||| ||||||||| ||| |||||||    
T  31672969 ggacactgacacaccgacacagctaataatttga--aaaaatcacttaattcagtgtaattacaagt 31672905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 52284702 - 52284792
Alignment:
Q  111 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg-----tgtcggtgtcagacacgacacgtatccgaca 197  Q
    |||||||||||||||||||| |||||  | |||||||||||||| |||||||||||     | ||||||||||||||||||| | |||||||    
T  52284702 gacacagctaataatttaaa-aaaaaaaatataattcagtataattacaagtgtcggtgaatatcggtgtcagacacgacacatgtccgaca 52284792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 2896198 - 2896143
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    ||||||||||||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  2896198 cacggacactgacacgccgacaccgctaataatttga--gaaaatcacataattcagt 2896143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 5376577 - 5376506
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| |||||||||||| |||||||||||||   ||||| |||||||||||| ||| || ||||||||    
T  5376577 cacggacactaacacgccgacaccgctaataatttaa--gaaaataacataattcagtgtaattaaaagtgtcg 5376506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 6612248 - 6612177
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| ||||||||||| |||| ||||||||| ||  ||||| |||||||||||| ||| |||||||||||    
T  6612248 cacggacaatgacacgccgatacagttaataatttgaa--aaaattacataattcagtgtaattacaagtgtcg 6612177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 12443541 - 12443482
Alignment:
Q  89 gaagcacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||| || ||||||||||||||||||||||||| |   ||||||||||||||||||    
T  12443541 gaagcacggatacggacacgccgacacagctaataatttga--gaaaatcacataattcagt 12443482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 14359594 - 14359529
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    ||||| |||||||||||||||||||||||||    ||||||||||||||| ||| ||| ||||||||||    
T  14359594 gacacggacacgccgacacagctaataattt---gaaaaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 24577259 - 24577192
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||| ||||||| |||||| |||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  24577259 gacacggacacgctgacacaactaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 24577192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 31015025 - 31015096
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||| ||||||| |||| |||||||||||||||| |   |||||||||||||||||| ||| |||||||||||    
T  31015025 cacgggcactgacgcgcctacacagctaataatttgag--aaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 1705068 - 1704998
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| ||||| |||||||| |||||||||| ||  |||||||||||||||||  ||| |||||||||||    
T  1705068 acggacaccgacacaccgacacatctaataatttgaa--aaaatcacataattcagggtaattacaagtgtcg 1704998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 225
Target Start/End: Complemental strand, 5898339 - 5898218
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 196  Q
    |||||||| |||||||||| ||||||||| | ||  |||||||||||||||||| ||| || | | ||||     |||||||||||||||||| ||| ||    
T  5898339 gacactgagacgccgacaccgctaataatctgaa--aaaatcacataattcagtgtaattatatgcgtcg-----gtgtcagacacgacacgtgtccaac 5898247  T
Q  197 aacaggacatgtataattcgaggagtgtc 225  Q
    | | ||||| || |||| |||||||||||    
T  5898246 accgggacacgtctaatccgaggagtgtc 5898218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 15641107 - 15641045
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataacta 157  Q
    |||||||||||||| |||||||| |||||||||||||   |||||||||| ||||||| ||||||    
T  15641107 cacggacactgacatgccgacactgctaataatttaa--gaaaatcacatgattcagtgtaacta 15641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 26526835 - 26526762
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| |||| |  || |||||||||||||||| ||||| ||||||||| | ||||| |||||||||||    
T  26526835 cacggacactaacacactaacgcagctaataatttaaaaaaaaaacacataatttaatataattacaagtgtcg 26526762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 40917733 - 40917839
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 186  Q
    |||||| |||||||||||||||||||||||||||| |  |||||||||  |||| ||| ||| |||||      |||||||||||||||  |||||||||    
T  40917733 cacggatactgacacgccgacacagctaataatttga--aaaaatcac--aattaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgaca 40917828  T
Q  187 cgtatccgaca 197  Q
    ||| |||||||    
T  40917829 cgtgtccgaca 40917839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 48040539 - 48040467
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||||| ||||||||| || |||  ||||||| || ||| ||| |||||||||||    
T  48040539 cacggacactgacacgccgacacagataataatttgaa-aaaggtcacatattttagtgtaaatacaagtgtcg 48040467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 24334781 - 24334711
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||| ||||| |||||||||||||| |||| || ||||||  ||||||||||| ||| |||||||||||    
T  24334781 cggacacggacacaccgacacagctaatcatttgaaaaaaaat-gcataattcagtgtaattacaagtgtcg 24334711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 1262866 - 1262925
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataa 154  Q
    |||| |||| ||||||||||||||||||||||||| |   |||||||||||||||| |||||    
T  1262866 cacgaacacggacacgccgacacagctaataatttga--gaaaatcacataattcaatataa 1262925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 13997869 - 13997920
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    ||||||||||||||||||| | |||| ||||||  |||||||||||||||||||    
T  13997869 gacactgacacgccgacaccgttaattatttaa--aaaaatcacataattcagt 13997920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 21378560 - 21378631
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||  ||||| |||||||||||||||| || ||  ||||| |||||||||||| ||| |||||||||||    
T  21378560 cacggacatggacacaccgacacagctaataaattgaa--aaaattacataattcagtgtaattacaagtgtcg 21378631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 36878447 - 36878498
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    ||||||||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttga--gaaaatcacataattcagt 36878498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 6427331 - 6427385
Alignment:
Q  92 gcacggacactgacacgccgacacagctaataatttaaataaaaatcacataattca 148  Q
    ||||||||||||||||||| |||| ||||||||||| |   ||||||||||||||||    
T  6427331 gcacggacactgacacgccaacaccgctaataatttga--gaaaatcacataattca 6427385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 9033085 - 9033029
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||||||||| | ||||  |||||||||| || |||||||||||||||||||    
T  9033085 cacggacactgacacgtcaacaccactaataatttgaa-aaaaatcacataattcagt 9033029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 29144431 - 29144365
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||| |||||||||||||||||||||| || |||||| | ||||| |||| ||| ||||||||||    
T  29144431 gacactgatacgccgacacagctaataatttgaa-aaaaat-agataatgcagtgtaattacaagtgtc 29144365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 19562 - 19659
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 196  Q
    |||||||||||||||| ||| |||||||||| ||   ||||||||||||||||| ||| |||||||||  |||||||||  |||||||||||| ||||||    
T  19562 gacactgacacgccgatacaactaataatttgaa---aaatcacataattcagtgtaattacaagtgttatgtcggtgttggacacgacacgtgtccgac 19658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 8e-18; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 24894371 - 24894426
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  24894371 cacggacactgacacgccgacacagctaataatttaa--aaaaatcacataattcagt 24894426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 37558959 - 37559030
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||| | ||| |||||||||||    
T  37558959 cacggacactgacacgccgacacagctaataattt--gtaaaaatcacataattcaatgtaattacaagtgtcg 37559030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 19536475 - 19536403
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||| ||| |||||||||||    
T  19536475 cacggacaatgacacgccgacacaactaataatttgaa-aaaaatcacataattcagtgtaattacaagtgtcg 19536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 30404927 - 30404820
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    ||||||||||||||||||||||| | ||||||||| ||  |||||||||||||||||| ||| |||||||     ||||| ||| |||||||||| | ||    
T  30404927 cacggacactgacacgccgacacggttaataatttgaa--aaaatcacataattcagtgtaattacaagt-----gtcggcgtcggacacgacacatgtc 30404835  T
Q  193 cgacaacaggacatg 207  Q
    ||||| |||||||||    
T  30404834 cgacaccaggacatg 30404820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 18421945 - 18422016
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||||  |||||||||||  ||| ||||||||||||||| ||| |||||||||||    
T  18421945 cacggacactgacacgccgacacaattaataatttaa--aaatatcacataattcagtgtaattacaagtgtcg 18422016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 27460011 - 27460068
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataa 154  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||    
T  27460011 ggacactgacacgccgacacagctaataatttgaa-aaaaatgacataattcagtataa 27460068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 10548007 - 10547950
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||| ||||||||||    
T  10548007 cacggacactgacacgtcgacaccgttaataatttaaataaaaatcatataattcagt 10547950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 14996301 - 14996229
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||| |||||||||||||||||||| || |||||||| |||||| ||| ||| |||||||||||    
T  14996301 cacggacactgacaagccgacacagctaataatttgaa-aaaaatcatataatttagtgtaattacaagtgtcg 14996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 21374776 - 21374706
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||||| |||||||||||||||||||||||| |  |||||| |||||||||||| ||| ||||||||||    
T  21374776 cacggacactaacacgccgacacagctaataatttga--aaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 21624252 - 21624320
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||||||||||| || ||||||  ||||||||||| ||| |||||||||||    
T  21624252 gacactgacacgccgacacagctaataattttaa-aaaaatagcataattcagtgtaattacaagtgtcg 21624320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 2438794 - 2438671
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    |||||||||||||  || ||||||||||||||||| ||  |||||||||||||||||| ||| |||||||     ||||||||| |||||||||| | ||    
T  2438794 cacggacactgac--gctgacacagctaataatttcaa--aaaatcacataattcagtgtaattacaagt-----gtcggtgtcggacacgacacatgtc 2438704  T
Q  193 cgacaacaggacatgtataattcgaggagtgtc 225  Q
    ||||| | ||||| |  |||| |||||||||||    
T  2438703 cgacaccgggacacgcctaatccgaggagtgtc 2438671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 6940237 - 6940308
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||||||||||||||||||||| |  |||| | |||||||| ||| ||| |||||||||||    
T  6940237 cacggacactgacacgccgacacagctaataatttta--aaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 20539751 - 20539680
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||| |||||||||||||||||| |  |||||||| |||||| ||| ||| |||||||||||    
T  20539751 cacggacactgacacgtcgacacagctaataatttga--aaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 30717607 - 30717536
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||  |||||| |||||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  30717607 cacggacactgacaaaccgacaaagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 30717536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 15972855 - 15972951
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    ||||||||||||||||||||||||  ||||||||| |  |||||| ||| |||||||| ||| |||||     ||||||||||| |||||||||||| ||    
T  15972855 cacggacactgacacgccgacacaattaataatttga--aaaaattacacaattcagtgtaattacaa-----gtgtcggtgtcggacacgacacgtgtc 15972947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 38117232 - 38117167
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||| || ||| |||||||||    
T  38117232 gacactgacacgccgacacagctaataatttga--aaaaatcacatacttcggtgtaattacaagtgt 38117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 5040729 - 5040787
Alignment:
Q  108 gccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||| |||||||||||||| || ||||||||||||||||| | ||| |||||||||||    
T  5040729 gccgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcg 5040787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 15657846 - 15657917
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| |||||||||| || ||||||||||   |||||||||||||||||||| ||| ||||| |||||    
T  15657846 cacggacactaacacgccgactcaactaataatttg--taaaaatcacataattcagtgtaattacaaatgtcg 15657917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 16069331 - 16069276
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    ||||||||||||||||||||||| | |||||||||||  |||||||| ||||||||||    
T  16069331 cacggacactgacacgccgacaccgttaataatttaa--aaaaatcatataattcagt 16069276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 18841087 - 18840993
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccga 195  Q
    |||||||||||||| |||||| |||||||||| ||  ||||| |||||||| ||| ||| |||||||||||     |||||||||||||||| | |||||    
T  18841087 ggacactgacacgctgacacaactaataatttgaa--aaaattacataattaagtgtaattacaagtgtcg-----gtgtcagacacgacacatgtccga 18840995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 20473308 - 20473375
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||| ||||||||| ||||||||||||  |||| ||| |||||||||| ||| |||||||||||    
T  20473308 gacactgacatgccgacacaactaataatttaa--aaaactcatataattcagtgtaattacaagtgtcg 20473375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 225
Target Start/End: Original strand, 37419727 - 37419861
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacg 188  Q
    ||||||||||||||||||||  || |||||||| |  |||||||||| |||||||| ||| |||||      |||||||||||||||| |||||||  ||    
T  37419727 cggacactgacacgccgacatggcaaataatttga--aaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcg 37419824  T
Q  189 tatccgacaacaggacatgtataattcgaggagtgtc 225  Q
    | ||||||| | ||||| |  |||| |||||||||||    
T  37419825 tgtccgacaccgggacacgcctaatccgaggagtgtc 37419861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 23058520 - 23058448
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| ||||||||| |||||  ||||||||| || |||||||||||||| |||| ||| |||||||||||    
T  23058520 cacggacagtgacacgcccacacaattaataatttgaa-aaaaatcacataatccagtgtaattacaagtgtcg 23058448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 28677895 - 28677993
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 196  Q
    |||||||  |||||||||| ||||||||||| ||  |||||||||||||||||| ||| || | ||   |||||||||||| |||||||| || ||||||    
T  28677895 gacactggaacgccgacaccgctaataatttgaa--aaaatcacataattcagtgtaattatatgttcggtgtcggtgtcaaacacgacaagtgtccgac 28677992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 5891845 - 5891762
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgt 189  Q
    ||||| ||||||||| |||||||||   ||||||| ||||||||  || ||| || |||||||||||||||||  ||||||||||||    
T  5891845 gacacaccgacacagttaataattt---taaaaattacataattatgtgtaattataagtgtcgtgtcggtgtttgacacgacacgt 5891762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 21091706 - 21091775
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||||||||| ||||||| |||||||||||||   ||||| ||||| |||||| ||| ||||||||||    
T  21091706 acggacactgacacaccgacaccgctaataatttaa--gaaaataacatacttcagtgtaattacaagtgtc 21091775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 33153415 - 33153476
Alignment:
Q  102 tgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    ||||||||||| ||| ||||| |||||||  |||||||||||||||||| ||| ||||||||||    
T  33153415 tgacacgccgaaacatctaatgatttaaa--aaaatcacataattcagtgtaattacaagtgtc 33153476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 11223937 - 11223869
Alignment:
Q  96 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||| ||||||| ||||||||||||| ||| ||  ||||| |||||||||||| ||| |||||||||||    
T  11223937 ggacacagacacgctgacacagctaatattttgaa--aaaataacataattcagtgtaattacaagtgtcg 11223869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 12941012 - 12940941
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||||||  |||||| |||||||||| |  |||||||| |||||||||| ||| ||||| |||||    
T  12941012 cacggacactgacacgttgacacaactaataatttga--aaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 21616744 - 21616799
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    ||||||||| ||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  21616744 cacggacacggacacgccgacaccgctaataatttga--gaaaatcacataattcagt 21616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 31808063 - 31808114
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    ||||||||||| ||||||| |||||||||||||   ||||||||||||||||||    
T  31808063 gacactgacacaccgacaccgctaataatttaa--caaaatcacataattcagt 31808114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 19573962 - 19574047
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacac 182  Q
    |||||||| ||||||||||||| | |||||||||||   ||||| |||||||||||| ||| || | ||| |||||||||||| |||||    
T  19573962 acggacac-gacacgccgacaccgataataatttaag--aaaataacataattcagtgtaattataggtggcgtgtcggtgtcggacac 19574047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 21782890 - 21782840
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 150  Q
    |||||||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  21782890 acactgacacgccgacactgctaataatttga--gaaaatcacataattcagt 21782840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 39323246 - 39323316
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||||||| ||| |||||| ||||||||||| |   ||||| |||||||||||| ||| ||||||||||    
T  39323246 cacggacactgaaacgtcgacaccgctaataatttga--caaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 44635520 - 44635573
Alignment:
Q  135 aatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacac 187  Q
    |||||| ||||||||| ||| |||||||||| ||||||||||| ||||||||||    
T  44635520 aatcacgtaattcagtgtaattacaagtgtcggtgtcggtgtcggacacgacac 44635573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 12224212 - 12224276
Alignment:
Q  102 tgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||| ||| |||||||||||| || ||||||| |||||| || | ||| |||||||||||    
T  12224212 tgacacgccaacatagctaataatttgaaaaaaaatcccataatccaatgtaattacaagtgtcg 12224276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 35056922 - 35056958
Alignment:
Q  161 gtgtcgtgtcggtgtcagacacgacacgtatccgaca 197  Q
    |||||||||||||||| |||||||||||| |||||||    
T  35056922 gtgtcgtgtcggtgtcggacacgacacgtgtccgaca 35056958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 13382 - 13476
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacg 188  Q
    |||||||||||||||||||||||| |||||||||| |   ||||||||||||||||||  || |||||| ||| ||||||||||| |||||||||||    
T  13382 cacggacactgacacgccgacacaactaataatttga--gaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacg 13476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 20154 - 20224
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||| ||| ||||||||||    
T  20154 cacggacaatgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtc 20224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 21945 - 21851
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacg 188  Q
    |||||||||||||||||||||||| |||||||||| |   ||||||||||||||||||  || |||||| ||| ||||||||||| |||||||||||    
T  21945 cacggacactgacacgccgacacaactaataatttga--gaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacg 21851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 123612 - 123681
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaa-aatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||| |||||||||||    
T  123612 acactgacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcg 123681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 92790 - 92859
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||||||||||||||||| ||||||||||| |   ||||| |||||||||||| ||| ||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttga--gaaaattacataattcagtgtaattacaagtgtc 92859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 8780 - 8877
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 192  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||| || ||| ||| ||| |||||     ||||||||||| |||||||||||| ||    
T  8780 cacggacactgacacgccgacacagctaataatttga--aaaaatcatattatttagtgtaattacaa-----gtgtcggtgtcggacacgacacgtgtc 8872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 4950 - 4891
Alignment:
Q  104 acacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  4950 acacaccgacacagctaataatttaaa-aaaaatcacataattcagtgtaattacaagtgt 4891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 33430 - 33355
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagaca 181  Q
    ||||||||||||||||||||||||| |  |||||| |||||||||||| ||| ||||| ||||||||||||||| ||||    
T  33430 gacacgccgacacagctaataatttga--aaaaataacataattcagtgtaattacaa-tgtcgtgtcggtgtccgaca 33355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 539 - 468
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||| |||||||||| ||||||||||| |  |||||||||| |||||||| ||| |||||||||||    
T  539 cacggacactgatacgccgacactgctaataatttga--aaaaatcacaaaattcagtgtaattacaagtgtcg 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 46664 - 46735
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| |||||||||||||||| ||||||||| |  ||||||||||||||||||| ||| ||||| |||||    
T  46664 cacggacaatgacacgccgacacagttaataatttga--aaaaatcacataattcagtgtaattacaaatgtcg 46735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 178896 - 178825
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatca-cataattcagtataactacaagtgtc 165  Q
    |||||||||||||||||||||||| |||||||||| |  |||||||| ||||||||||| ||| ||||||||||    
T  178896 cacggacactgacacgccgacacaactaataatttga--aaaaatcatcataattcagtgtaattacaagtgtc 178825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 192325 - 192256
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||||||||||||||||| | ||||||||| |   ||||| ||||||||| || ||| ||||||||||    
T  192325 acggacactgacacgccgacaccgttaataatttga--gaaaattacataattcggtgtaattacaagtgtc 192256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 23406 - 23494
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacac 187  Q
    ||||||||||||||||||||| |||||| | ||  ||||||||||||||||||| ||| || ||||||| ||||| ||||| ||||||||||    
T  23406 gacactgacacgccgacacagataataactcaa--aaaaatcacataattcagtgtaattataagtgtcggtgtc-gtgtcggacacgacac 23494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 23497 - 23563
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 165  Q
    |||||||||| ||||||||| |||||| ||||| ||||||||||||||||||| ||| || |||||||    
T  23497 acactgacacaccgacacagttaataacttaaa-aaaaatcacataattcagtgtaattataagtgtc 23563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 3922 - 3778
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacacgacacgta 190  Q
    |||||||| | |||||||| | ||||||||||||  |||||||||||||||||| ||| ||||      |||||||||| |||||| |||||||||| |     
T  3922 gacactgatatgccgacacggttaataatttaaa--aaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatg 3825  T
Q  191 tccgacaacaggacatgtataattcgaggagtgtcatttcttcatag 237  Q
    ||||||| |  |||| |  |||| ||||||||||| || ||||||||    
T  3824 tccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 241576 - 241684
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 186  Q
    |||||||||||||||||||||||||||||||||||    ||||||||||||||| ||| ||| ||  |      ||||||||| |||||| |||||||||    
T  241576 cacggacactgacacgccgacacagctaataattt--ggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgaca 241673  T
Q  187 cgtatccgaca 197  Q
    ||| |||||||    
T  241674 cgtgtccgaca 241684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 348083 - 348135
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataatt 146  Q
    |||||||||||||| || || ||||||| |||||||| |||||||||||||||    
T  348083 acggacactgacacaccaacccagctaaaaatttaaaaaaaaatcacataatt 348135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 7108 - 7040
Alignment:
Q  94 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 164  Q
    ||||||||||| ||| |||||||||||||||||| |  |||||| |||||||| ||||||| |||||||||    
T  7108 acggacactgatacgtcgacacagctaataatttga--aaaaattacataatttagtataattacaagtgt 7040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 23753 - 23823
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    ||||||||||||| | | ||||| ||||||||| || ||||||||||||||||||| ||| |||||||||||    
T  23753 cggacactgacacactgtcacagttaataatttgaa-aaaaatcacataattcagtgtaattacaagtgtcg 23823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 130464 - 130535
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||| ||||| |||||||||| ||||| ||| ||  |||||||||||||||||| ||| |||||||||||    
T  130464 cacggacaatgacaagccgacacagttaatagtttgaa--aaaatcacataattcagtgtaattacaagtgtcg 130535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 14522 - 14580
Alignment:
Q  103 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtg 163  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||||| ||| ||||||||    
T  14522 gacacgccgacacaactaataatttgaa--aaaatcacataattcagtgtaattacaagtg 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 45608 - 45536
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||||||||||||| |||||||  |||| || |||| |||||| |||||||||||| ||| |||||||||||    
T  45608 cacggacactgacacgtcgacacaattaattatctaaaaaaaaat-acataattcagtgtaattacaagtgtcg 45536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 224
Target Start/End: Original strand, 70264 - 70384
Alignment:
Q  97 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 196  Q
    ||||| |||| | |||||||| ||||||||| ||  ||||| |||||||||||| ||| || ||     ||||||||||| |||||||||||| ||||||    
T  70264 gacacagacatgtcgacacagttaataatttgaa--aaaataacataattcagtgtaattataa-----gtgtcggtgtcggacacgacacgtgtccgac 70356  T
Q  197 aacaggacatgtataattcgaggagtgt 224  Q
    | |||||||||  |||| ||| ||||||    
T  70357 accaggacatgcctaatccgatgagtgt 70384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 9752 - 9688
Alignment:
Q  161 gtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtc 225  Q
    ||||||||| ||||||||||||||||| | || |||| | ||||| ||||||| |||||||||||    
T  9752 gtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtc 9688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 225345 - 225264
Alignment:
Q  93 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtc 176  Q
    ||||||||||||||||||||||||| ||||||||| |   ||||| ||||||| || | ||| || ||||||||||| ||||||    
T  225345 cacggacactgacacgccgacacagataataatttga--gaaaatgacataatacaatgtaattataagtgtcgtgttggtgtc 225264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 8707 - 8604
Alignment:
Q  98 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgtat 191  Q
    ||||||||| ||||||||| |||||||||| ||  || |||||||||||| |||||| |||||      ||||||||||||| || ||||||| |||| |    
T  8707 acactgacatgccgacacaactaataatttgaa--aatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgt 8610  T
Q  192 ccgaca 197  Q
    ||||||    
T  8609 ccgaca 8604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 189
Target Start/End: Complemental strand, 263378 - 263349
Alignment:
Q  160 agtgtcgtgtcggtgtcagacacgacacgt 189  Q
    ||||||||||||||||||||||||||||||    
T  263378 agtgtcgtgtcggtgtcagacacgacacgt 263349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 17824 - 17755
Alignment:
Q  95 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 166  Q
    |||||| | |||||| |||||| |||||||||| ||  |||||||||||||| ||| ||| |||||||||||    
T  17824 cggacaataacacgctgacacaactaataatttgaa--aaaatcacataatttagtgtaattacaagtgtcg 17755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University