View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10865A_high_25 (Length: 249)
Name: NF10865A_high_25
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_high_25 |
 | |
|
| [»] scaffold0129 (1 HSPs) |
| | |
|
| [»] scaffold0009 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 9314089 - 9314275
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9314089 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
9314188 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9314189 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
9314275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 35216104 - 35215918
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216104 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
35216005 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35216004 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
35215918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 38222858 - 38222672
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38222858 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
38222759 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38222758 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
38222672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 16727645 - 16727829
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16727645 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
16727744 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtaca |
191 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16727745 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtaca |
16727829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 12773432 - 12773246
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12773432 |
caaacttgcttaagaatatattgaacattccacttgtttacatttactatacacttcaaaaatcaaaagtcatatttccaatggatatgaatacaatatt |
12773333 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12773332 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
12773246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 23717767 - 23717953
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23717767 |
caaacttgcttaagaatacattgaacatttcacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
23717866 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23717867 |
tattaatttacattgagtctcaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
23717953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 32742746 - 32742932
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32742746 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaaatcaaaagtcatatttccaatggatatgaatacaatatt |
32742845 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32742846 |
tgttaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
32742932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 44501763 - 44501802
Alignment:
| Q |
154 |
agacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
44501763 |
agacatagactaatttgtctttttgtttggtatgtacagt |
44501802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 17195905 - 17196091
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17195905 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
17196004 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17196005 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
17196091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 10485142 - 10484956
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10485142 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatattttcaatggatatgaatacaatatt |
10485043 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10485042 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
10484956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 21395395 - 21395209
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21395395 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
21395296 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21395295 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgtctttttgtttggtatgtacagt |
21395209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 1086120 - 1086304
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1086120 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
1086219 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtaca |
191 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
1086220 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacataaactaatttgcctttttgtttggtatgtaca |
1086304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 5926246 - 5926060
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5926246 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
5926147 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5926146 |
tattaatttacattgagtctcaagatttggtgcaacgtaattctaagagacatagactaatttgcttttttgtttggtatgtacagt |
5926060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 49550622 - 49550808
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49550622 |
caaacttgcttaaaaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
49550721 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49550722 |
tattaatttacattgagtctcaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
49550808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 14676828 - 14676642
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14676828 |
caaacttgcttaagaatacattgaacattccagttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
14676729 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14676728 |
tattaatttacattgagtcccaagatttggtgcaacataattctaagagacatagactaatttgcctttttgtttggtatctacagt |
14676642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 45117902 - 45117716
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
45117902 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatgaatatgaatacaatatt |
45117803 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
45117802 |
tattaatttacattgagtcccaagatttggtgcaatgtaattctaagagacatagactaatttgcctttttgtttgatatgtacagt |
45117716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 27182877 - 27183064
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27182877 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
27182976 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttg-cctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
27182977 |
tattaatttacattgagtctcaagatttggtgcaacgtaattctaagagacatagactaatttgtcttttttgtttggtatgtacagt |
27183064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 45106587 - 45106516
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtca |
78 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45106587 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtca |
45106516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 44553828 - 44554014
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44553828 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
44553927 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44553928 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
44554014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 27644926 - 27645112
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27644926 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
27645025 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
27645026 |
tattaatttacattgagtcccaagatttggtgcaacgtaattccaagagacgtagactaatttgcctttttgtttggtatgtacagt |
27645112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 38518690 - 38518876
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38518690 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
38518789 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38518790 |
tattaatttacattgagtcacaagatttagtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
38518876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 20394578 - 20394392
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20394578 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
20394479 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20394478 |
tattaatttacattgagtcccaagatctggtgcaatgtaattctaagggacatagactaatttgcctttttgtttggtatgtacagt |
20394392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 34945262 - 34945077
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
34945262 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatataaatataatatt |
34945163 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
34945162 |
tattaatttacattgagt-ccaagatttggtgcaacgtaattctaagagacatagactaatttgcccttttgtttggtatgtacagt |
34945077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 3863612 - 3863510
Alignment:
| Q |
12 |
ttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatttatta |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
3863612 |
ttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatataatatttatta |
3863513 |
T |
|
| Q |
112 |
att |
114 |
Q |
| |
|
||| |
|
|
| T |
3863512 |
att |
3863510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 3863327 - 3863242
Alignment:
| Q |
106 |
ttattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtaca |
191 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3863327 |
ttattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtaca |
3863242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 28392857 - 28392970
Alignment:
| Q |
80 |
atttccaatggatatgaatacaatatttattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgt |
179 |
Q |
| |
|
|||||||||| ||||||| ||| || ||| |||||||| ||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28392857 |
atttccaatgaatatgaacacagtagttactaatttacgttgagccccaagattcgctgcaacgtaattctaagagacatagactaatttgcctttttgt |
28392956 |
T |
|
| Q |
180 |
ttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
28392957 |
ttggtatgtacagt |
28392970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 49529794 - 49529612
Alignment:
| Q |
8 |
aaacttgcttaagaatacattgaaca------ttccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaataca |
101 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||||||||| | | || || ||||| |||| || ||| |
|
|
| T |
49529794 |
aaacttgcttaagaatacattgaacacatttgttcatcttgtttacatttactgtac--ttcaaaagtcattattgatttt--caatgcatataaacaca |
49529699 |
T |
|
| Q |
102 |
atatttattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgt |
188 |
Q |
| |
|
|| ||| |||||||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||| |||| |||| |
|
|
| T |
49529698 |
ctagttactaatttacgttgagtcccaagattcgctgcaacgtaattctaagaggcatagactaatttgcctttttggttggcatgt |
49529612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 10542297 - 10542250
Alignment:
| Q |
146 |
attctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10542297 |
attctaagagacatagactaatttgcctttttgtttggtatgtacagt |
10542250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 3522360 - 3522174
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3522360 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
3522261 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
3522260 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgtctttttgtttggtatgtacagt |
3522174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 10902244 - 10902058
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10902244 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
10902145 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10902144 |
tattaatttacattgagtctcaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
10902058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 10269735 - 10269921
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10269735 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
10269834 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10269835 |
tattaatttacattgaatcccaagatttggtgcaacgtaattctaagagatatagactaatttgcctttttgtttggtatgtacagt |
10269921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 335249 - 335074
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
335249 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
335150 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttg |
182 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
335149 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttg |
335074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 43314788 - 43314940
Alignment:
| Q |
41 |
tgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatttattaatttacattgagtcccaagatttggtgca |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43314788 |
tgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatttattaatttacattgagtcccaagatttggtgca |
43314887 |
T |
|
| Q |
141 |
acgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
43314888 |
acgtaattctaagagatatagactaatttgcctttttgtttggtatgtacagt |
43314940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 13618835 - 13618768
Alignment:
| Q |
126 |
ccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
13618835 |
ccaagatttggtgcaacgtaattctaagagacatagactaatttgcttttttgtttggtatgtacagt |
13618768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 32591969 - 32591904
Alignment:
| Q |
128 |
aagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
32591969 |
aagatttggtgcaacgtaattctaagagacatagactaatttgcatttttgtttggtatgtacagt |
32591904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 183; Significance: 4e-99; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 30704632 - 30704818
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30704632 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
30704731 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30704732 |
tgttaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
30704818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 14218659 - 14218473
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218659 |
caaacttgcttaagaatatattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
14218560 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
14218559 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttagtatgtacagt |
14218473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 21351344 - 21351453
Alignment:
| Q |
80 |
atttccaatggatatgaatacaatatttattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgt |
179 |
Q |
| |
|
|||||||||| ||||||| |||||| ||| |||||||| |||| |||||| || | ||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
21351344 |
atttccaatgcatatgaacacaatagttactaatttacgttgaaccccaaggttcgctgcaacgtaattctaagaggcatagactaatttgcctttttat |
21351443 |
T |
|
| Q |
180 |
ttggtatgta |
189 |
Q |
| |
|
|| ||||||| |
|
|
| T |
21351444 |
tttgtatgta |
21351453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 183; Significance: 4e-99; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 2026368 - 2026182
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2026368 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
2026269 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2026268 |
tattaatttacattgagtcccaagatttggtgcaatgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
2026182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 37828224 - 37828410
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37828224 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaattcatatttccaatggatatgaatacaatatt |
37828323 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37828324 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
37828410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 43487761 - 43487575
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43487761 |
caaacttgcttaagaatatattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
43487662 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43487661 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
43487575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 23415354 - 23415168
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23415354 |
caaacttgcttaagaatacattgaactttccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
23415255 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
23415254 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcttttttgtttggtatgtacagt |
23415168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 3614977 - 3614795
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3614977 |
caaactttcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
3614878 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgta |
189 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3614877 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgtctttttgtttggtatgta |
3614795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 37039287 - 37039473
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37039287 |
caaacttgtttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
37039386 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
37039387 |
tattaatttacattgagtcataagatttagtgcaacgtaattctaagagacatagattaatttgcctttttatttggtatgtacagt |
37039473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 18003617 - 18003730
Alignment:
| Q |
80 |
atttccaatggatatgaatacaatatttattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgt |
179 |
Q |
| |
|
|||||||||| ||||||| ||| || ||| |||||||| |||||||||||| || | ||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
18003617 |
atttccaatgcatatgaacacagtaattactaatttacgttgagtcccaaggttcgttgcaacgtaattctaagaggcatatactaatttgcctttttgt |
18003716 |
T |
|
| Q |
180 |
ttggtatgtacagt |
193 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
18003717 |
ttgatatgtacagt |
18003730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 33336180 - 33336067
Alignment:
| Q |
80 |
atttccaatggatatgaatacaatatttattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgt |
179 |
Q |
| |
|
|||||||||| ||||||| ||| || ||| |||||||| |||||||| ||| || | || |||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
33336180 |
atttccaatgcatatgaacacagtaattactaatttacgttgagtcctaaggttcgctgtaacgtaattctaagaggcatagactaatttacctttttgt |
33336081 |
T |
|
| Q |
180 |
ttggtatgtacagt |
193 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
33336080 |
ttggtatggacagt |
33336067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 7357041 - 7357227
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7357041 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
7357140 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
7357141 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacattgactaatttgcctttttgtttggtatgtacagt |
7357227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 30112277 - 30112463
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30112277 |
caaacttacttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
30112376 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30112377 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
30112463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 30123564 - 30123750
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30123564 |
caaacttacttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
30123663 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30123664 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
30123750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 12532647 - 12532461
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12532647 |
caaacttgcttaagaatacattgaacattcgacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
12532548 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12532547 |
tattaatttacattgagtcctaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
12532461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 3534587 - 3534401
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3534587 |
caaacttgcttaagaatacattgaacattccatttgtttacatttactatatacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
3534488 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3534487 |
tattaatttacattgaatcccaagatttggtgcaacttaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
3534401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 2272273 - 2272092
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| || |
|
|
| T |
2272273 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacactttaaaaggcaaaagtcatatttccaatggatatgaata-----tt |
2272179 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
2272178 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttgatatgtacagt |
2272092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 16642352 - 16642538
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16642352 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
16642451 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16642452 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagattaatttgcctttttgtttggtatgtacagt |
16642538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 41773601 - 41773415
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
41773601 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatgaatatgaatacaatatt |
41773502 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41773501 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
41773415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 29649984 - 29649867
Alignment:
| Q |
76 |
tcatatttccaatggatatgaatacaatatttattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgccttt |
175 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
29649984 |
tcatatttccaatgaatatgaatacaatatttattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatatactaatttgccttt |
29649885 |
T |
|
| Q |
176 |
ttgtttggtatgtacagt |
193 |
Q |
| |
|
|| ||||||||||||||| |
|
|
| T |
29649884 |
ttatttggtatgtacagt |
29649867 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 79 - 193
Target Start/End: Complemental strand, 29658383 - 29658272
Alignment:
| Q |
79 |
tatttccaatggatatgaatacaatatttattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttg |
178 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
29658383 |
tatttccgatggatatgaatacaatatttattaatttacattgagttccaagatttggtgcaacgtaattc---gagacatagactaatttgccattttg |
29658287 |
T |
|
| Q |
179 |
tttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
29658286 |
tttggtatgtacagt |
29658272 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 8363016 - 8362954
Alignment:
| Q |
131 |
atttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8363016 |
atttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
8362954 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 22146981 - 22147021
Alignment:
| Q |
153 |
gagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22146981 |
gagacatagactaatttgcctttttgtttggtatgtacagt |
22147021 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 39597 - 39783
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
39597 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatattttcaatggatatgaatacaatatt |
39696 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39697 |
tattaatttacattgagtccgaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
39783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 15771 - 15957
Alignment:
| Q |
7 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcatatttccaatggatatgaatacaatatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
15771 |
caaacttgcttaagaatacattgaacattccacttgtttacatttactatacacttcaaaagtcaaaagtcacatttccaatggatatgaatacaatatt |
15870 |
T |
|
| Q |
107 |
tattaatttacattgagtcccaagatttggtgcaacgtaattctaagagacatagactaatttgcctttttgtttggtatgtacagt |
193 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
15871 |
tattaatttatattgagtcccaagatttggtgcaacgtaattctaagagacatagactaattttcctttttgtttggtatatacagt |
15957 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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