View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10865A_low_128 (Length: 315)
Name: NF10865A_low_128
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_low_128 |
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Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 9 - 272
Target Start/End: Complemental strand, 46551078 - 46550815
Alignment:
| Q |
9 |
aatgagaataaatataatgccattttattaaaatttggtagaaatagttaaacccatcgttagaccaaatctccattagacgcctctgaattatgaataa |
108 |
Q |
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| T |
46551078 |
aatgagaataaatataataccattttattaaaatttggtagaaatagttaaacccatcgttagaccaaatctccattagacgcctctgaattatgaataa |
46550979 |
T |
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| Q |
109 |
gtaacttaattctaaacaattttgtttcaaatttaggggtttatatttgccaagcaggaactagtaggagattttatttcaaataacttctggtcaatca |
208 |
Q |
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| T |
46550978 |
gtaacttaattctaaacaattttgtttcaaatttaggggtttatatttgccaagcaggaactaggaggagattttatttcaaacaacatctagtcaatca |
46550879 |
T |
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| Q |
209 |
tgttcaactatttacgacccttttgtaggataaaactaatatggtattagtgtttaataatgaa |
272 |
Q |
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| T |
46550878 |
tgttcaactatttacaacccttttgtaggataaaactaatatggtattagtgtttaataatgaa |
46550815 |
T |
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