View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10865A_low_147 (Length: 295)
Name: NF10865A_low_147
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_low_147 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 32107526 - 32107794
Alignment:
| Q |
1 |
aatgatatttctattgaaaaaaccaaaaccaagtttcgtgtatcttcctctcaaaaaagataagttgcatgtgtcttaaaaataagatcttatttgagtt |
100 |
Q |
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| T |
32107526 |
aatgatatttctattgaaaaaaccaaaaccaagtttcgtgtatcttcctctcaaaaaagataagttgcatgtgtcttgaaaataagatcttatttgattt |
32107625 |
T |
|
| Q |
101 |
tataaaaaatgaaatatatcaccttataaacttaatttatatggatgaattatacttaatatatgaacctaataatttcaacacatcttaatttttgtt- |
199 |
Q |
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|||||| | ||| |||| |||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
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| T |
32107626 |
tataaagagtgatatatttcaccttataaaatagatttatatggatgaattatgctcaatatatgaacctaataatttcaacacatcttaatttttgttg |
32107725 |
T |
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| Q |
200 |
ggacttctggatagccttaacattatggtcaatcatcacatttgattaagaacaatcacataagtaagt |
268 |
Q |
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| T |
32107726 |
ggacttctggatagctttaacattatgattaatcatcacatttggttaagaacaatcacacaagtaagt |
32107794 |
T |
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