View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10865A_low_173 (Length: 279)
Name: NF10865A_low_173
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_low_173 |
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Alignment Details
Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 164055 - 164331
Alignment:
| Q |
1 |
aatatcagtagtggatagagattcaacagacatggctgagagtgttcaaaaaatatggatcaagttcgttgttatgcaaaagctcatgataccataaaaa |
100 |
Q |
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| T |
164055 |
aatatcagtagtggatagagattcaacagacatggctgagagtgttcaaaaaatatggatcaagttcgttgttatgcaaaagctcatgataccataaaaa |
164154 |
T |
|
| Q |
101 |
gggttagaaatgaactattgagttgcattagaatgaaagaacgctttatataaatagcactgtcagttactgcaatgttaggaacaaatacatacaagta |
200 |
Q |
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| T |
164155 |
gggttagaaatgaactattgagttgcattagaatgaaagaacgctttatataaatagcactgtcagttactgcaatgttaggaacaaatacatacaagta |
164254 |
T |
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| Q |
201 |
ggaacataacgaatctccatgataacagttaaagaattctaattataaaccataatagaaagcttataactagtgat |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
164255 |
ggaacataacgaatctccatgataacagttaaagaattctaattataaaccataatagaaagcttataactagtgat |
164331 |
T |
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