View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10865A_low_177 (Length: 278)
Name: NF10865A_low_177
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_low_177 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 8 - 278
Target Start/End: Original strand, 52850613 - 52850883
Alignment:
| Q |
8 |
tgagatgaaacataatggctggtgtttcactttgaatactttacatcaaacacttgcataaagtcacaattatatgctatttttatgtcatatatcaagt |
107 |
Q |
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| T |
52850613 |
tgagatgaaacataatggctggtgtttcactttgaatgctttacatcaaacacttgcataaagtcacaattatatgctatttttatgtcatatatcaagt |
52850712 |
T |
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| Q |
108 |
tttcacactattttcatgccacaattactgaacagcctgctgtctctaacccgtgagaggaaaatgctcagtaagcaagtgcataagaagttttcgagga |
207 |
Q |
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| T |
52850713 |
tttcacactattttcatgccacaattactgaacagcctgctgtctctaacccgtgagaggaaaatgctcagtaagcaagtgcataagaagttttcgagga |
52850812 |
T |
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| Q |
208 |
agggaagagaggaactatacctgaagtggggtattgatttgaagacaaaacacagaagtatacaattggca |
278 |
Q |
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| T |
52850813 |
agggaagagaggaactatacctgaagtggggtattgatttgaagacaaaacacagaagtatacaattggca |
52850883 |
T |
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