View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10865A_low_210 (Length: 265)

Name: NF10865A_low_210
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10865A_low_210
NF10865A_low_210
[»] chr1 (49 HSPs)
chr1 (143-265)||(50680335-50680457)
chr1 (139-265)||(11437174-11437301)
chr1 (139-265)||(11436041-11436168)
chr1 (143-265)||(24426050-24426173)
chr1 (140-265)||(51684366-51684492)
chr1 (139-265)||(24422799-24422926)
chr1 (140-265)||(45148581-45148706)
chr1 (139-265)||(45157184-45157310)
chr1 (143-265)||(39153091-39153214)
chr1 (158-265)||(43058804-43058911)
chr1 (143-265)||(45149945-45150068)
chr1 (139-265)||(52274967-52275094)
chr1 (140-265)||(39699742-39699867)
chr1 (140-265)||(39222448-39222575)
chr1 (139-265)||(36612852-36612978)
chr1 (152-265)||(37526853-37526965)
chr1 (139-265)||(35594216-35594341)
chr1 (143-265)||(39151934-39152057)
chr1 (139-265)||(51685740-51685867)
chr1 (143-265)||(52276138-52276261)
chr1 (139-241)||(23980465-23980568)
chr1 (139-265)||(39698562-39698688)
chr1 (139-257)||(52827346-52827465)
chr1 (140-265)||(36613879-36614005)
chr1 (139-265)||(35595167-35595295)
chr1 (139-241)||(35067001-35067104)
chr1 (139-257)||(41366114-41366232)
chr1 (139-265)||(43059981-43060108)
chr1 (143-265)||(7983053-7983175)
chr1 (143-265)||(43378688-43378810)
chr1 (139-248)||(7675451-7675560)
chr1 (152-265)||(45156062-45156175)
chr1 (139-215)||(14999284-14999360)
chr1 (139-265)||(44404441-44404568)
chr1 (163-265)||(33088091-33088193)
chr1 (140-265)||(41364829-41364954)
chr1 (140-265)||(50681583-50681705)
chr1 (139-241)||(33088616-33088719)
chr1 (163-265)||(46066547-46066648)
chr1 (139-215)||(7674527-7674602)
chr1 (139-239)||(16290092-16290194)
chr1 (162-265)||(40384748-40384851)
chr1 (143-257)||(52828053-52828168)
chr1 (201-265)||(30248174-30248237)
chr1 (139-241)||(12389981-12390083)
chr1 (174-265)||(44411941-44412032)
chr1 (167-265)||(25652742-25652840)
chr1 (140-265)||(33739094-33739219)
chr1 (144-192)||(7987905-7987952)
[»] chr4 (48 HSPs)
chr4 (3-131)||(45499583-45499711)
chr4 (139-265)||(1290173-1290300)
chr4 (142-261)||(19750554-19750673)
chr4 (142-261)||(19789133-19789252)
chr4 (139-265)||(31599788-31599915)
chr4 (140-265)||(1834119-1834246)
chr4 (139-265)||(1835077-1835204)
chr4 (139-241)||(1963195-1963298)
chr4 (143-265)||(12129626-12129749)
chr4 (139-265)||(8757674-8757800)
chr4 (139-265)||(13509334-13509460)
chr4 (139-265)||(49308003-49308128)
chr4 (152-265)||(1289110-1289223)
chr4 (152-265)||(8758812-8758925)
chr4 (140-257)||(10471371-10471489)
chr4 (140-258)||(10447006-10447126)
chr4 (139-265)||(52491582-52491709)
chr4 (139-241)||(17382992-17383094)
chr4 (140-265)||(31600960-31601086)
chr4 (139-239)||(17388212-17388312)
chr4 (139-265)||(10470545-10470672)
chr4 (139-257)||(25685805-25685924)
chr4 (143-265)||(35935508-35935631)
chr4 (140-241)||(1964440-1964542)
chr4 (139-257)||(5525359-5525477)
chr4 (140-265)||(25684934-25685060)
chr4 (139-257)||(13386515-13386635)
chr4 (143-262)||(8155741-8155860)
chr4 (143-223)||(55602379-55602459)
chr4 (139-265)||(10448235-10448362)
chr4 (139-257)||(48780247-48780366)
chr4 (139-241)||(5526125-5526227)
chr4 (152-246)||(21539065-21539159)
chr4 (167-265)||(33296251-33296349)
chr4 (139-215)||(26421647-26421723)
chr4 (143-265)||(35934347-35934468)
chr4 (143-265)||(37728540-37728662)
chr4 (139-265)||(13386013-13386142)
chr4 (139-241)||(3928857-3928960)
chr4 (139-214)||(14868889-14868964)
chr4 (139-214)||(14876970-14877045)
chr4 (148-235)||(26420324-26420410)
chr4 (140-265)||(50909647-50909774)
chr4 (139-265)||(21177996-21178122)
chr4 (148-241)||(46638724-46638817)
chr4 (139-215)||(49306774-49306850)
chr4 (143-240)||(27257960-27258057)
chr4 (139-214)||(48781072-48781147)
[»] scaffold0320 (1 HSPs)
scaffold0320 (139-265)||(19487-19614)
[»] chr8 (48 HSPs)
chr8 (139-265)||(10007738-10007865)
chr8 (140-265)||(10006344-10006470)
chr8 (139-265)||(5513981-5514107)
chr8 (139-265)||(24122882-24123008)
chr8 (145-265)||(1824053-1824174)
chr8 (145-265)||(1858498-1858619)
chr8 (139-265)||(22221339-22221466)
chr8 (139-265)||(22227681-22227808)
chr8 (139-265)||(30335638-30335765)
chr8 (143-265)||(29968312-29968434)
chr8 (157-265)||(24123873-24123981)
chr8 (143-257)||(8389672-8389787)
chr8 (139-265)||(12353336-12353461)
chr8 (140-265)||(22220388-22220514)
chr8 (141-265)||(18979095-18979220)
chr8 (152-256)||(18978033-18978136)
chr8 (139-263)||(32207302-32207425)
chr8 (143-265)||(40471122-40471244)
chr8 (140-265)||(11283184-11283310)
chr8 (139-231)||(12351920-12352013)
chr8 (139-265)||(1823551-1823679)
chr8 (139-265)||(1857996-1858124)
chr8 (139-257)||(8388463-8388580)
chr8 (152-265)||(18970924-18971036)
chr8 (140-265)||(30336476-30336602)
chr8 (139-264)||(30568886-30569011)
chr8 (142-262)||(43661267-43661388)
chr8 (143-265)||(11282011-11282134)
chr8 (143-241)||(11287779-11287878)
chr8 (156-241)||(24488679-24488763)
chr8 (152-265)||(29043411-29043524)
chr8 (201-265)||(34625175-34625239)
chr8 (139-265)||(43661798-43661925)
chr8 (139-231)||(5003107-5003198)
chr8 (140-205)||(23170034-23170098)
chr8 (140-192)||(3819489-3819541)
chr8 (201-257)||(18488245-18488301)
chr8 (139-241)||(32968455-32968558)
chr8 (140-190)||(36249552-36249603)
chr8 (139-241)||(38980043-38980146)
chr8 (139-241)||(39011140-39011243)
chr8 (139-265)||(45114492-45114618)
chr8 (140-241)||(38974795-38974897)
chr8 (140-241)||(39005893-39005995)
chr8 (140-192)||(24483143-24483196)
chr8 (144-241)||(45112875-45112971)
chr8 (209-265)||(11456679-11456735)
chr8 (201-265)||(30570231-30570295)
[»] chr2 (40 HSPs)
chr2 (139-265)||(11258786-11258913)
chr2 (140-265)||(18299373-18299499)
chr2 (139-265)||(18904366-18904493)
chr2 (139-265)||(38840468-38840595)
chr2 (139-264)||(23869511-23869636)
chr2 (139-265)||(7899857-7899984)
chr2 (139-265)||(22587929-22588055)
chr2 (139-265)||(22848190-22848317)
chr2 (139-257)||(36449777-36449896)
chr2 (139-265)||(18797245-18797373)
chr2 (143-265)||(7898694-7898817)
chr2 (139-265)||(18905963-18906089)
chr2 (139-265)||(38839241-38839368)
chr2 (139-265)||(24475224-24475350)
chr2 (140-265)||(41878092-41878220)
chr2 (141-265)||(13030293-13030415)
chr2 (139-265)||(802566-802692)
chr2 (143-265)||(36450896-36451018)
chr2 (141-265)||(18300700-18300822)
chr2 (182-265)||(11996750-11996833)
chr2 (163-265)||(22587525-22587626)
chr2 (139-231)||(41879221-41879314)
chr2 (139-265)||(11257621-11257747)
chr2 (139-265)||(13570532-13570659)
chr2 (163-265)||(28617946-28618047)
chr2 (140-231)||(1034478-1034570)
chr2 (139-241)||(16446153-16446256)
chr2 (167-265)||(810756-810854)
chr2 (139-215)||(18868923-18869000)
chr2 (163-215)||(32739647-32739699)
chr2 (143-222)||(8534586-8534665)
chr2 (139-212)||(5819741-5819814)
chr2 (167-215)||(13568000-13568048)
chr2 (163-265)||(18869137-18869241)
chr2 (201-265)||(22067757-22067821)
chr2 (165-265)||(26545496-26545596)
chr2 (139-205)||(11938823-11938890)
chr2 (194-265)||(26544203-26544274)
chr2 (139-197)||(21837298-21837355)
chr2 (151-211)||(5362187-5362247)
[»] chr5 (38 HSPs)
chr5 (139-265)||(18486877-18487004)
chr5 (139-265)||(25523068-25523195)
chr5 (139-265)||(16650830-16650957)
chr5 (139-265)||(28538675-28538802)
chr5 (139-265)||(19752911-19753037)
chr5 (140-265)||(22940598-22940723)
chr5 (143-265)||(24332916-24333039)
chr5 (139-265)||(36486463-36486590)
chr5 (143-265)||(28539795-28539917)
chr5 (143-265)||(42195137-42195258)
chr5 (139-257)||(19754113-19754233)
chr5 (142-265)||(36485302-36485426)
chr5 (139-265)||(42196175-42196302)
chr5 (139-215)||(33160311-33160388)
chr5 (139-265)||(18485137-18485271)
chr5 (139-265)||(25055411-25055538)
chr5 (139-241)||(40255671-40255774)
chr5 (140-241)||(1796054-1796156)
chr5 (143-265)||(2186774-2186896)
chr5 (139-257)||(5777900-5778017)
chr5 (139-261)||(21835040-21835162)
chr5 (140-231)||(25056390-25056482)
chr5 (139-257)||(5778819-5778938)
chr5 (156-231)||(7311607-7311682)
chr5 (194-265)||(16650047-16650118)
chr5 (168-265)||(5730837-5730934)
chr5 (180-265)||(25524073-25524158)
chr5 (139-250)||(1797287-1797398)
chr5 (140-215)||(20214196-20214271)
chr5 (158-215)||(18154513-18154569)
chr5 (139-215)||(33158097-33158174)
chr5 (209-257)||(5961476-5961524)
chr5 (143-241)||(20216762-20216861)
chr5 (139-214)||(5730440-5730517)
chr5 (152-256)||(1015497-1015601)
chr5 (139-215)||(25524152-25524230)
chr5 (163-213)||(34893689-34893739)
chr5 (158-215)||(2685763-2685820)
[»] chr3 (53 HSPs)
chr3 (139-265)||(7758401-7758528)
chr3 (139-265)||(54540765-54540892)
chr3 (140-265)||(46719941-46720067)
chr3 (139-265)||(19984848-19984975)
chr3 (143-265)||(7267647-7267769)
chr3 (139-265)||(12700174-12700299)
chr3 (139-265)||(55191970-55192096)
chr3 (143-262)||(23770385-23770505)
chr3 (139-241)||(29931225-29931328)
chr3 (139-241)||(29980379-29980482)
chr3 (139-265)||(19986045-19986174)
chr3 (140-265)||(47614185-47614311)
chr3 (158-265)||(34019120-34019227)
chr3 (139-265)||(46721195-46721322)
chr3 (139-265)||(54539754-54539881)
chr3 (143-265)||(7268802-7268924)
chr3 (139-265)||(11671316-11671442)
chr3 (140-265)||(51469972-51470098)
chr3 (141-265)||(8456479-8456603)
chr3 (139-242)||(24516459-24516563)
chr3 (139-241)||(22776811-22776914)
chr3 (139-241)||(29932698-29932800)
chr3 (139-241)||(29981852-29981954)
chr3 (166-257)||(31645000-31645091)
chr3 (139-257)||(47609696-47609815)
chr3 (139-257)||(12703483-12703601)
chr3 (140-241)||(51037536-51037637)
chr3 (139-265)||(534498-534625)
chr3 (143-257)||(47610563-47610678)
chr3 (139-197)||(47615591-47615650)
chr3 (140-231)||(535791-535883)
chr3 (139-265)||(8875905-8876032)
chr3 (139-241)||(51038789-51038892)
chr3 (139-257)||(5029666-5029784)
chr3 (140-241)||(52840603-52840705)
chr3 (139-215)||(53614818-53614895)
chr3 (143-265)||(40426753-40426877)
chr3 (209-265)||(47615552-47615608)
chr3 (162-265)||(4271463-4271566)
chr3 (140-265)||(49216247-49216373)
chr3 (163-265)||(6249633-6249734)
chr3 (139-265)||(51470430-51470556)
chr3 (143-265)||(54986982-54987103)
chr3 (200-257)||(784930-784987)
chr3 (152-265)||(11670397-11670510)
chr3 (139-214)||(5001199-5001275)
chr3 (139-265)||(23769856-23769982)
chr3 (139-265)||(52839036-52839163)
chr3 (139-241)||(28262192-28262294)
chr3 (163-216)||(6170296-6170349)
chr3 (139-241)||(18442629-18442733)
chr3 (139-241)||(19487703-19487807)
chr3 (143-263)||(51347271-51347392)
[»] chr7 (36 HSPs)
chr7 (139-265)||(7500454-7500580)
chr7 (140-265)||(18371424-18371550)
chr7 (139-265)||(7501827-7501954)
chr7 (139-265)||(22630427-22630554)
chr7 (152-265)||(18372432-18372544)
chr7 (139-265)||(22629482-22629612)
chr7 (140-265)||(31659622-31659749)
chr7 (143-265)||(42886261-42886384)
chr7 (139-265)||(3227569-3227696)
chr7 (145-265)||(14999130-14999249)
chr7 (142-257)||(17781663-17781779)
chr7 (139-258)||(31660991-31661111)
chr7 (139-265)||(31949321-31949448)
chr7 (139-265)||(31949777-31949904)
chr7 (139-257)||(127336-127453)
chr7 (139-240)||(11658378-11658480)
chr7 (139-265)||(21505415-21505540)
chr7 (139-241)||(30439357-30439459)
chr7 (163-265)||(47369805-47369907)
chr7 (140-257)||(47525350-47525468)
chr7 (141-257)||(3227109-3227225)
chr7 (139-231)||(17782562-17782655)
chr7 (142-265)||(46482599-46482723)
chr7 (143-241)||(11662550-11662649)
chr7 (207-265)||(14998048-14998106)
chr7 (140-257)||(769413-769531)
chr7 (139-213)||(34174010-34174084)
chr7 (140-241)||(48934902-48935004)
chr7 (139-211)||(20163585-20163658)
chr7 (152-213)||(47524538-47524599)
chr7 (139-191)||(21508453-21508504)
chr7 (210-265)||(770736-770791)
chr7 (139-231)||(34351496-34351584)
chr7 (143-256)||(128585-128699)
chr7 (139-215)||(597309-597382)
chr7 (139-234)||(34352792-34352888)
[»] scaffold0632 (1 HSPs)
scaffold0632 (139-265)||(3283-3409)
[»] chr6 (31 HSPs)
chr6 (139-265)||(7316269-7316396)
chr6 (158-265)||(1829578-1829685)
chr6 (140-265)||(7314880-7315005)
chr6 (139-256)||(10784591-10784710)
chr6 (139-265)||(16704472-16704599)
chr6 (139-231)||(14822359-14822452)
chr6 (163-265)||(26575029-26575131)
chr6 (139-265)||(27437827-27437954)
chr6 (139-265)||(17496792-17496924)
chr6 (139-265)||(6842258-6842385)
chr6 (139-257)||(8659264-8659383)
chr6 (139-265)||(26574618-26574744)
chr6 (139-257)||(6840193-6840310)
chr6 (139-257)||(27322051-27322169)
chr6 (159-247)||(26949178-26949263)
chr6 (152-256)||(10785897-10786000)
chr6 (140-256)||(16703570-16703684)
chr6 (143-265)||(5658759-5658882)
chr6 (139-257)||(8821872-8821991)
chr6 (139-231)||(14823584-14823678)
chr6 (139-257)||(8660187-8660305)
chr6 (140-257)||(8822776-8822894)
chr6 (139-257)||(3721611-3721730)
chr6 (164-240)||(12350823-12350898)
chr6 (141-256)||(12382695-12382811)
chr6 (182-261)||(3333005-3333084)
chr6 (143-257)||(34834562-34834677)
chr6 (139-214)||(3722533-3722609)
chr6 (139-191)||(27447962-27448015)
chr6 (201-265)||(3333500-3333564)
chr6 (142-197)||(26717127-26717183)
[»] scaffold0019 (2 HSPs)
scaffold0019 (141-265)||(61434-61559)
scaffold0019 (140-265)||(60090-60216)
[»] scaffold2034 (1 HSPs)
scaffold2034 (140-256)||(233-350)
[»] scaffold1303 (1 HSPs)
scaffold1303 (139-265)||(1438-1565)
[»] scaffold0302 (2 HSPs)
scaffold0302 (139-241)||(17469-17572)
scaffold0302 (140-265)||(18751-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (139-265)||(5413-5540)
scaffold0294 (139-236)||(4441-4539)
[»] scaffold0003 (2 HSPs)
scaffold0003 (139-265)||(49408-49535)
scaffold0003 (139-191)||(39343-39396)
[»] scaffold0059 (2 HSPs)
scaffold0059 (163-265)||(3699-3801)
scaffold0059 (141-215)||(4755-4829)
[»] scaffold0045 (2 HSPs)
scaffold0045 (140-215)||(49109-49185)
scaffold0045 (164-265)||(48334-48432)
[»] scaffold0586 (1 HSPs)
scaffold0586 (143-257)||(6346-6461)
[»] scaffold0049 (2 HSPs)
scaffold0049 (139-261)||(7394-7517)
scaffold0049 (202-265)||(7894-7957)
[»] scaffold0186 (1 HSPs)
scaffold0186 (140-241)||(23081-23181)
[»] scaffold0093 (2 HSPs)
scaffold0093 (141-265)||(2440-2564)
scaffold0093 (141-265)||(7063-7187)
[»] scaffold0369 (1 HSPs)
scaffold0369 (139-233)||(13192-13285)
[»] scaffold0227 (1 HSPs)
scaffold0227 (140-241)||(118-220)


Alignment Details
Target: chr1 (Bit Score: 99; Significance: 6e-49; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 50680335 - 50680457
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||     
T  50680335 taaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccctttgca 50680434  T
Q  243 tctttgatccttttggtcaattt 265  Q
    |||||||||||||||||||||||    
T  50680435 tctttgatccttttggtcaattt 50680457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 11437301 - 11437174
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | ||||||||||||||||| |    
T  11437301 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagatttaaccctt 11437202  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    || | |||||||||||||||||||||||    
T  11437201 ttacatctttgatccttttggtcaattt 11437174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 11436041 - 11436168
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||   |||||||||||||||||||||| | ||||||||||||||||| |    
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagatttaacccat 11436140  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| | ||||||||||||||    
T  11436141 ttgcatctttggttcttttggtcaattt 11436168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 24426173 - 24426050
Alignment:
Q  143 taaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgc 24426074  T
Q  242 ttctttgatccttttggtcaattt 265  Q
       |||||| ||||||||||||||    
T  24426073 aaatttgatacttttggtcaattt 24426050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 51684366 - 51684492
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||||||||||||||||| ||||| || ||||||||||||| || ||||||||||||||||||| | ||||||||||||| ||||||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagcccctt 51684465  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| ||||||||| ||||||    
T  51684466 tgcatctttggtccttttggccaattt 51684492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 24422799 - 24422926
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||| | ||||||||||||| ||||     
T  24422799 aggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccca 24422898  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||   |||||||||||||||||||||    
T  24422899 ttgcaaatttgatccttttggtcaattt 24422926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 45148581 - 45148706
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||| ||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||   ||||||||||||||||||||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagatttaacccctt 45148679  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| ||||||||| ||||||    
T  45148680 tgcatctttggtccttttggccaattt 45148706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 45157310 - 45157184
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||| || ||| |||||||||||||||   ||  ||||||||||||||||    
T  45157310 aggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctt 45157211  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| ||||||||||||||||    
T  45157210 tgcatctttggtccttttggtcaattt 45157184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 39153214 - 39153091
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||| || ||| |||||||||||||||   || ||||||||||||||||||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 39153115  T
Q  242 ttctttgatccttttggtcaattt 265  Q
     |||||| ||||||||||||||||    
T  39153114 atctttggtccttttggtcaattt 39153091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 265
Target Start/End: Original strand, 43058804 - 43058911
Alignment:
Q  158 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttg 257  Q
    |||| ||||||| |||||||| |||||||| |||| |||||| ||||||||||||||||| || |||||||||| ||||||| | |||||||||||||||    
T  43058804 ccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccctttacatctttgatccttttg 43058903  T
Q  258 gtcaattt 265  Q
    ||||||||    
T  43058904 gtcaattt 43058911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 45150068 - 45149945
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt-agtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||| ||||| |||||||||||||||| ||||||||||||| |||||| |||||| ||||||||    ||||||||||||| |||||||||    
T  45150068 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccctttgc 45149969  T
Q  242 ttctttgatccttttggtcaattt 265  Q
     |||||||||||||||| ||||||    
T  45149968 atctttgatccttttggccaattt 45149945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 52274967 - 52275094
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||| ||||| |||||||||||||||| |||||||| |||| |||||| ||||||||||||||| | ||||||||||||| || |     
T  52274967 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcctca 52275066  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||   |||||||||||||||||||||    
T  52275067 ttgcaaatttgatccttttggtcaattt 52275094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 39699867 - 39699742
Alignment:
Q  140 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    |||||||||||| ||| ||||| |||||||||| ||||| |||||||| |||| |||||| | ||||||||||||| | ||||||||||||| |||| ||    
T  39699867 ggctaaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagccccatt 39699768  T
Q  240 gcttctttgatccttttggtcaattt 265  Q
    ||  |||| |||||||||||||||||    
T  39699767 gcaactttaatccttttggtcaattt 39699742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 39222575 - 39222448
Alignment:
Q  140 ggctaaagtgcatttt--ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    |||||||||||| |||  ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| || |||||||||  ||| |    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgcccat 39222476  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| || |||||| ||||||    
T  39222475 ttgcatctttggtctttttgggcaattt 39222448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 36612852 - 36612978
Alignment:
Q  139 aggctaaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||||  |  |||||| ||||||||||||||||  |||||||||||||  ||||    
T  36612852 aggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttggatct-taagtacaaaaactacaattttaaccccctaagatttagtccct 36612950  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| || |||||||||||||    
T  36612951 ttgcatctttggtcattttggtcaattt 36612978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 265
Target Start/End: Complemental strand, 37526965 - 37526853
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 251  Q
    ||||||||||||||||||||||||||| |||||||||| || ||| |||| |||| |||||||| | ||||||||||||| ||||||||| |||||| ||    
T  37526965 ttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaatttt-ggcccctaagatttagcccctttgcatctttggtc 37526867  T
Q  252 cttttggtcaattt 265  Q
     ||||| |||||||    
T  37526866 tttttgatcaattt 37526853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 35594216 - 35594341
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||| |||||||||||||||| |||||||| |||| ||||||| |||||||||||||| | ||||||| ||||| |||||    
T  35594216 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgacccc-taagtattaaaactacaatttt-gacccctaaaatttagcccct 35594313  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||| | ||||||    
T  35594314 ttgcatctttggtccttttagccaattt 35594341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 39151934 - 39152057
Alignment:
Q  143 taaagtgcattttc-cccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    |||||||||||||  ||||||||| ||||||||||||  |||||||||||| || ||| |||||||||||||||    |  |||||||||||||||||||    
T  39151934 taaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagatttaacccctttgc 39152033  T
Q  242 ttctttgatccttttggtcaattt 265  Q
     |||||| ||||||||||||||||    
T  39152034 atctttggtccttttggtcaattt 39152057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 51685867 - 51685740
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| ||||||||||||| || | ||||||||||  || ||| |||||||||||||||   ||||||||||||| |||||    
T  51685867 aggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccct 51685768  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||| ||||||    
T  51685767 ttgcatctttggtccttttggccaattt 51685740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 52276261 - 52276138
Alignment:
Q  143 taaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||||||| | ||||||||||||| ||  |||||||||||| |||||| |||||||| || ||||||||||||||||||| |||| ||||    
T  52276261 taaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagccccattgc 52276162  T
Q  242 ttctttgatccttttggtcaattt 265  Q
       ||||||||||||| |||||||    
T  52276161 aaatttgatccttttgatcaattt 52276138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 23980568 - 23980465
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| ||||||| |||||||| |||||||||| || |||||| |||||||| |||||| ||| ||||||||||| |||||    
T  23980568 aggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagcccct 23980469  T
Q  238 ttgc 241  Q
    ||||    
T  23980468 ttgc 23980465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 39698562 - 39698688
Alignment:
Q  139 aggctaaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||| |||||| | |||||| |||||| | || |||||||||| || |     
T  39698562 aggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataatttt-ggccactaagatttagcctcg 39698660  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  |||| |||||||||||||||||    
T  39698661 ttgcaactttaatccttttggtcaattt 39698688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 52827346 - 52827465
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||| |||| ||||||  ||||| ||||||| |  ||||||||||||| ||||     
T  52827346 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcccca 52827445  T
Q  238 ttgcttctttgatccttttg 257  Q
    ||||  ||||| ||||||||    
T  52827446 ttgcaactttggtccttttg 52827465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 36614005 - 36613879
Alignment:
Q  140 ggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||||||| || ||| ||||||| ||||||||  |||||||||||| |||||| |||||||||||||||   ||||||||||||| || |||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagcctctt 36613906  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||  ||||  |||||||| |||||||    
T  36613905 tgcaactttagtccttttgatcaattt 36613879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 35595295 - 35595167
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttc-caattttggccccataagtataaaaacta-caattttagtcccctaagatttaaccc 235  Q
    ||||||||||| | ||| |||||| ||||||| ||||||||  |||||||| |||| || |||||||||||| ||||||| | ||||||||||||| |||    
T  35595295 aggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttgg-cccctaagatttagccc 35595197  T
Q  236 ctttgcttctttgatccttttggtcaattt 265  Q
    |||||| |||||| ||||||||||||||||    
T  35595196 ctttgcatctttggtccttttggtcaattt 35595167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 35067104 - 35067001
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||||||| ||||||||| || | ||||||||||| || | | ||||||||||||||| | ||||||| ||||| |||||    
T  35067104 aggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagcccct 35067005  T
Q  238 ttgc 241  Q
    ||||    
T  35067004 ttgc 35067001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 41366232 - 41366114
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||| | |||||||||||||| | ||||||| ||||| ||||||| ||||| |||| ||||| ||||||||||||| ||||     
T  41366232 aggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaa-tttagccccctaagatttagcccca 41366134  T
Q  238 ttgcttctttgatccttttg 257  Q
    ||||  ||||| ||||||||    
T  41366133 ttgcaactttggtccttttg 41366114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 43060108 - 43059981
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||| | ||| |||||| ||||||||||||| ||  ||||||| |||| |||||| |||||||||||||||   ||| ||||||||| | | |    
T  43060108 aggctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagctcat 43060009  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||||||||||    
T  43060008 ttgcatctttggtccttttggtcaattt 43059981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 7983053 - 7983175
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||| ||| | ||| |||||||||| ||||| ||||||||||||| || |||| ||||| ||||||||   ||||||||||||| |||| ||||     
T  7983053 taaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatccccattgca 7983152  T
Q  243 tctttgatccttttggtcaattt 265  Q
      ||| |||||||||||||||||    
T  7983153 aatttcatccttttggtcaattt 7983175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 43378810 - 43378688
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||| ||| | | |||||||||||||||||| ||||||||  ||| |||||| ||||| |||||||||   | ||||||||||| | |||||||     
T  43378810 taaagtgcacttttctctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgca 43378711  T
Q  243 tctttgatccttttggtcaattt 265  Q
    ||||| |||||||||||| ||||    
T  43378710 tctttaatccttttggtcgattt 43378688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 7675560 - 7675451
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||| | ||||| || ||||||||||||||||| |||||||| || | |||||| ||||| || ||||||   ||||||||||||| ||||||    
T  7675560 aggctaaagtgtactttccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctt 7675461  T
Q  239 tgcttctttg 248  Q
    ||| ||||||    
T  7675460 tgcatctttg 7675451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 265
Target Start/End: Original strand, 45156062 - 45156175
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 251  Q
    |||||| ||||||| |||||||||||| |||||||| ||   || ||| ||||||||||||||||  || ||||||||||||| |||||  |||||| ||    
T  45156062 ttttcctcccttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaattttaaccctctaagatttaacctctttgtatctttggtc 45156161  T
Q  252 cttttggtcaattt 265  Q
     |||||||||||||    
T  45156162 tttttggtcaattt 45156175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 14999284 - 14999360
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||||||| | ||| ||||| |||||||||||||||| |||||||| |||| |||||| |||||||||||||||    
T  14999284 aggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 14999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 44404441 - 44404568
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    |||||||| |||| |||| ||| | |||||||||||||||  ||||||| ||||| |||||| |||||||| |||||| | ||||||| ||||| ||  |    
T  44404441 aggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagccaat 44404540  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| || |||||||||||||    
T  44404541 ttgcatctttggtcattttggtcaattt 44404568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 33088091 - 33088193
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 262  Q
    ||||||||||||||||  ||||||   | | ||| ||||||||||||||||||| |||| ||||||||| ||| |||||||||||  ||||||||| |||    
T  33088091 taactttcaaaaacttgtaatttttatctcctaaatataaaaactacaattttattcccttaagatttagcccatttgcttctttagtccttttggccaa 33088190  T
Q  263 ttt 265  Q
    |||    
T  33088191 ttt 33088193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 41364829 - 41364954
Alignment:
Q  140 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    |||||||||||| ||| | ||| |||||||||||||||| ||||||||||||| ||| ||  ||||| |||||||    ||||||||||||| |||| ||    
T  41364829 ggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagccccatt 41364928  T
Q  240 gcttctttgatccttttggtcaattt 265  Q
    ||  ||||| || ||||| |||||||    
T  41364929 gcaactttggtcattttgatcaattt 41364954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 50681705 - 50681583
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||||||| ||||| |||||||||||| |||||||||| |  ||| ||||||||||||||| || |||||    |||||| || |||    
T  50681705 ggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaatattggtccc----gatttagcctctt 50681610  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| |||| ||| |||||||    
T  50681609 tgcatctttggtcctattgatcaattt 50681583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 33088719 - 33088616
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| ||| || |||| ||||||||||| |||||||| |||  |||||| |||||||||||||||    |||||||||||| |||||    
T  33088719 aggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagcccct 33088620  T
Q  238 ttgc 241  Q
    ||||    
T  33088619 ttgc 33088616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 46066547 - 46066648
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 262  Q
    ||||||||||||| || | ||||| ||||| || ||| ||||||||||||||||| ||||||||||||| ||  ||||| ||| ||||| ||||| ||||    
T  46066547 taactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttag-cccctaagatttagccaatttgcatctctgatctttttgatcaa 46066645  T
Q  263 ttt 265  Q
    |||    
T  46066646 ttt 46066648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 7674527 - 7674602
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||||||||  ||| ||||| ||||||| |||||||| ||||||||| ||| |||||| |||||||||||||||    
T  7674527 aggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttgggccc-taagtacaaaaactacaatttt 7674602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 16290092 - 16290194
Alignment:
Q  139 aggctaaagtgcattttcccccctt--aactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 236  Q
    |||||||||||||||||  |||| |  ||| |||||||| || ||||||||| ||| || ||||||||||||||||||||  | || |||| ||||||||    
T  16290092 aggctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaattttaacctcccaagaattaacccc 16290191  T
Q  237 ttt 239  Q
    |||    
T  16290192 ttt 16290194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 265
Target Start/End: Original strand, 40384748 - 40384851
Alignment:
Q  162 ttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtca 261  Q
    |||| ||||||||| || ||||||| | | | || ||| |||||||||||||||  |||||||| ||||| || |||||| |||||| ||||||||| ||    
T  40384748 ttaattttcaaaaagttgcaattttagtctcctatgtacaaaaactacaattttgatcccctaaaatttagcctctttgcatctttggtccttttggcca 40384847  T
Q  262 attt 265  Q
    ||||    
T  40384848 attt 40384851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 52828168 - 52828053
Alignment:
Q  143 taaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||| |||||| ||| |||||||||||| |||||||||| || ||||||  ||||| |||||||    ||||||||||||| |||| ||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 52828069  T
Q  242 ttctttgatccttttg 257  Q
      ||||| ||||||||    
T  52828068 aactttggtccttttg 52828053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 30248174 - 30248237
Alignment:
Q  201 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||||||||||||  || |||||||||||| ||||||| ||||||||| |||||| ||||||    
T  30248174 aaaaactacaattttac-cctctaagatttaactcctttgcatctttgatcattttggccaattt 30248237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 12390083 - 12389981
Alignment:
Q  139 aggctaaagtgcattttcccc-ccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||||||| ||| |||||||||||||||| || | ||||||  ||| || ||| ||||| || |||||| | ||||| ||||||| |||||    
T  12390083 aggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccccct-agatttagcccct 12389985  T
Q  238 ttgc 241  Q
    ||||    
T  12389984 ttgc 12389981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 44412032 - 44411941
Alignment:
Q  174 aacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||| ||||||| | ||| |||||| ||||||||||||||||  ||  |||||||||  ||||||||  ||||||||||||| | ||||||    
T  44412032 aacttgcaattttagtcccctaagtacaaaaactacaattttacccctttaagatttaggccctttgcaactttgatcctttttgccaattt 44411941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 265
Target Start/End: Original strand, 25652742 - 25652840
Alignment:
Q  167 tttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    |||||||||||| ||||||||  ||| |||||| ||||| || || ||| | || |||||||||| ||| ||||| |||||| || |||||| ||||||    
T  25652742 tttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagcccatttgcatctttggtcattttggccaattt 25652840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 33739094 - 33739219
Alignment:
Q  140 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    ||||||| ||||||||  |||  |||||||||||| |||  ||||||| |||| || | | | |||||| || |||  |||||||| |||||||||| ||    
T  33739094 ggctaaaatgcattttttccctctaactttcaaaagcttgtaattttgaccccttacgcacagaaactaaaaattttatcccctaaaatttaaccccatt 33739193  T
Q  240 gcttctttgatccttttggtcaattt 265  Q
    ||  |||| ||| |||||||||||||    
T  33739194 gcaactttaatcattttggtcaattt 33739219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 7987952 - 7987905
Alignment:
Q  144 aaagtgcattttccccccttaactttcaaaaacttccaattttggcccc 192  Q
    |||||||||||| |||||| |||||||||||| || |||||||||||||    
T  7987952 aaagtgcatttttccccct-aactttcaaaaatttacaattttggcccc 7987905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 9e-48; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 45499583 - 45499711
Alignment:
Q  3 tcgactgagatgaattgcatggaattgatgctctttcaaaagcagaacttaagtgtagctgagccaaacacaactttatttactgaagtgtagttatttg 102  Q
    |||| ||| ||| |||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45499583 tcgaatgacatggattgtatggaattgatgctttttcaaaagctgaacttaagtgtagctgagccaaacacaactttatttactgaagtgtagttatgtg 45499682  T
Q  103 gagttggggttaaatggtattttccatac 131  Q
    |||||||||||||||||||||||| ||||    
T  45499683 gagttggggttaaatggtattttctatac 45499711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 1290300 - 1290173
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||    
T  1290300 aggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccct 1290201  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||||||||||    
T  1290200 ttgcatctttggtccttttggtcaattt 1290173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 19750673 - 19750554
Alignment:
Q  142 ctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    |||||||||| ||| ||||| ||||||| |||||||| ||||||||||||| |||||| ||||||||||||||||  ||||||||||||| |||| ||||    
T  19750673 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19750574  T
Q  242 ttctttgatccttttggtca 261  Q
       |||||||||||||||||    
T  19750573 aaatttgatccttttggtca 19750554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 19789133 - 19789252
Alignment:
Q  142 ctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    |||||||||| ||| ||||| ||||||| |||||||| ||||||||||||| |||||| ||||||||||||||||  ||||||||||||| |||| ||||    
T  19789133 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19789232  T
Q  242 ttctttgatccttttggtca 261  Q
       |||||||||||||||||    
T  19789233 aaatttgatccttttggtca 19789252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 31599788 - 31599915
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||| ||||||| |||| ||||| ||||||| |||||||| |||||||| |||| |||||| ||||||||||||||| ||||||||||||||| |||||    
T  31599788 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccct 31599887  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||||||||||| | ||||||    
T  31599888 ttgcaactttgatcctttttgccaattt 31599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 1834119 - 1834246
Alignment:
Q  140 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttag-tcccctaagatttaacccct 237  Q
    |||||||||||| ||| |||||| ||||||| |||||||| |||||||| |||| || ||||||||||||||||||| |  ||||||||||||| ||| |    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcccat 1834218  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||||||||||    
T  1834219 ttgcatctttggtccttttggtcaattt 1834246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 1835204 - 1835077
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||  || |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||   ||||||||||||| |||||    
T  1835204 aggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 1835105  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||| | ||||||    
T  1835104 ttgcatctttggtccttttagccaattt 1835077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 1963195 - 1963298
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||||||||||||||||| || ||||||||||| | || ||| ||||||||||||||||| ||||||||| ||| |||||    
T  1963195 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcccct 1963294  T
Q  238 ttgc 241  Q
    ||||    
T  1963295 ttgc 1963298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 12129626 - 12129749
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||   ||| ||||||||| ||| |||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 12129725  T
Q  242 ttctttgatccttttggtcaattt 265  Q
     |||||| || ||||| |||||||    
T  12129726 atctttggtcattttgatcaattt 12129749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 8757674 - 8757800
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| |||  ||||||||||||||||||||| ||||||| ||||| |||||| | ||||||||||||| | ||| ||||||||| |||| |    
T  8757674 aggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagccccat 8757773  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||   ||| |||||||||||||||||    
T  8757774 tgcaattttaatccttttggtcaattt 8757800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 13509460 - 13509334
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||| | ||| ||||| ||||||| ||||| || |||||||||||||  |||||| ||||||||||||||  |||||||||||||| ||||||    
T  13509460 aggctaaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagcccctt 13509361  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||  ||||| ||||||||| ||||||    
T  13509360 tgcacctttgctccttttggccaattt 13509334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 49308128 - 49308003
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||||| | |||||| |||||  |||||     
T  49308128 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt-gccccctatgattttgcccctg 49308030  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
     || |||||| |||||| |||||||||    
T  49308029 cgcatctttggtcctttgggtcaattt 49308003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 265
Target Start/End: Original strand, 1289110 - 1289223
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 251  Q
    |||||||||||||||||||||| | ||  |||||||  ||  |||||||||||||||||||||||| | | |||||||||||||| |||| |||||| ||    
T  1289110 ttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaagatttaacccccttgcatctttggtc 1289209  T
Q  252 cttttggtcaattt 265  Q
    ||||||||||||||    
T  1289210 cttttggtcaattt 1289223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 265
Target Start/End: Complemental strand, 8758925 - 8758812
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 251  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| | ||||||||||||| | ||| ||||||||| | || ||||   ||| |||    
T  8758925 ttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagctccattgcaattttaatc 8758826  T
Q  252 cttttggtcaattt 265  Q
    ||||||||||||||    
T  8758825 cttttggtcaattt 8758812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 10471489 - 10471371
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| |||| |    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 10471390  T
Q  239 tgcttctttgatccttttg 257  Q
    |||  ||||| ||||||||    
T  10471389 tgcaactttggtccttttg 10471371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 10447006 - 10447126
Alignment:
Q  140 ggctaaagtgca-ttttccccc-cttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    |||||||||||| ||||||||| ||||| ||||||||| || ||||||| ||||| || ||| |||||| |||||||||  ||||||||||||| |||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccct 10447105  T
Q  238 ttgcttctttgatccttttgg 258  Q
    |||| |||||| |||||||||    
T  10447106 ttgcatctttggtccttttgg 10447126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 52491709 - 52491582
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||| | |||||| |||||||||||||||||||| ||||||||| ||  ||| || | ||||||||||||| | ||||||| ||||| ||||     
T  52491709 aggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagcccca 52491610  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  |||| |||||||||||||||||    
T  52491609 ttgcaactttaatccttttggtcaattt 52491582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 17382992 - 17383094
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| | ||| |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | |||| |||| ||| ||||||    
T  17382992 aggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatcccctt 17383091  T
Q  239 tgc 241  Q
    |||    
T  17383092 tgc 17383094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 31601086 - 31600960
Alignment:
Q  140 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||  ||||| ||||||| |||||||| |||||||| |||| |||||| |||||||||||||||   ||| ||||||||| ||| ||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccatt 31600987  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||  ||||||||||||| ||||||||    
T  31600986 tgcaactttgatcctttttgtcaattt 31600960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 17388312 - 17388212
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||||||||| ||| |||||| | ||||||||||||| | |||| |||| ||| ||||||    
T  17388312 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagcccctt 17388213  T
Q  239 t 239  Q
    |    
T  17388212 t 17388212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 10470545 - 10470672
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||  ||||||  ||||  |||||||    ||||||||||||| ||||     
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagcccca 10470644  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||| |||||||| |||||||    
T  10470645 ttgcaactttggtccttttgatcaattt 10470672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 25685924 - 25685805
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  25685924 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagcccca 25685825  T
Q  238 ttgcttctttgatccttttg 257  Q
    ||||  ||||| ||||||||    
T  25685824 ttgcaactttggtccttttg 25685805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 35935631 - 35935508
Alignment:
Q  143 taaagtgcattttcccccc-ttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||||||||| |||||||| ||||| || ||||||| ||||| |||||| | ||||||||||||| | ||||||||||||| || | ||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcctcattgc 35935532  T
Q  242 ttctttgatccttttggtcaattt 265  Q
      |||| |||||||||| ||||||    
T  35935531 aactttaatccttttggccaattt 35935508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 1964542 - 1964440
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||||| ||||||||||| ||||| || ||||||||||||| || | | ||||||||||||||| ||||| ||||| ||| ||||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttggtcccttaagaattatcccctt 1964443  T
Q  239 tgc 241  Q
    |||    
T  1964442 tgc 1964440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 5525359 - 5525477
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||| |||||| ||||| |||||||||||||||| |||||||| |||| ||||||  ||||| |||||||    ||||||||||||| |||| |    
T  5525359 aggctaaagtacatttttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5525458  T
Q  239 tgcttctttgatccttttg 257  Q
    |||  ||||| ||||||||    
T  5525459 tgcaactttggtccttttg 5525477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 25684934 - 25685060
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||| |||  ||||||  ||||| |||||||    ||||||||||||| |||| |    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagccccat 25685033  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||  ||||| |||||||| |||||||    
T  25685034 tgcaactttggtccttttgatcaattt 25685060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 13386635 - 13386515
Alignment:
Q  139 aggctaaagtgca--ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 236  Q
    |||||||||||||  |||||||||| |||||||||||||||| |||||||| |||||||||||  ||||| |||||||    |||||||||| || ||||    
T  13386635 aggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagcccc 13386536  T
Q  237 tttgcttctttgatccttttg 257  Q
     ||||  ||||| ||||||||    
T  13386535 attgcaactttggtccttttg 13386515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 262
Target Start/End: Original strand, 8155741 - 8155860
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggc-cccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||| |||||| ||||||||||||||| ||||||| || ||| |||||  ||||||||||||||| | ||||||||||||| || ||||||    
T  8155741 taaagtgcacttttccccct-aactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttgc 8155839  T
Q  242 ttctttgatccttttggtcaa 262  Q
     |||||  || ||||||||||    
T  8155840 atctttagtcattttggtcaa 8155860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 55602379 - 55602459
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccct 223  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||| | ||  ||  ||||||||||||||||||||||||||    
T  55602379 taaagtgcatttttcccctttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaattttagtcccct 55602459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 10448362 - 10448235
Alignment:
Q  139 aggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| || ||| ||| ||| ||||||||| || | ||||| ||||| || ||| ||||||||||||||| | || ||||||| || |||||    
T  10448362 aggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcccct 10448263  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||| ||||||    
T  10448262 ttgcatctttggtccttttggccaattt 10448235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 48780247 - 48780366
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||| ||||||| |||||||| |||||||| |||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  48780247 aggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 48780346  T
Q  238 ttgcttctttgatccttttg 257  Q
    ||||  ||||| ||||||||    
T  48780347 ttgcaactttggtccttttg 48780366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 5526227 - 5526125
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| ||||  |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| |||| |    
T  5526227 aggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagccccat 5526128  T
Q  239 tgc 241  Q
    |||    
T  5526127 tgc 5526125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 21539159 - 21539065
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctt 246  Q
    |||||| ||||||| ||| |||||||| ||||||||||| | ||||| ||||||||||||||||   ||||||||||||| | ||||||| ||||    
T  21539159 ttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgcatctt 21539065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 265
Target Start/End: Original strand, 33296251 - 33296349
Alignment:
Q  167 tttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||||||||  |||||||| | | ||||||||||||||| |||||| ||||||||  ||||| | | ||||| ||||||||| |||||||||||||    
T  33296251 tttcaaaaacttataattttggtctcctaagtataaaaactataattttggtcccctataatttagctcatttgcatctttgatcattttggtcaattt 33296349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 26421723 - 26421647
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||||||||| ||| ||||  |||||||||||||||| |||||||| || | |||||| |||||||||||||||    
T  26421723 aggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaatttt 26421647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 35934347 - 35934468
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||| ||| |||||| |||||||||||||||  |||||||| ||| |||||| | ||| || |||||| | ||| ||||||||| |||| ||||     
T  35934347 taaagtgcacttttccccct-aactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagccccattgca 35934445  T
Q  243 tctttgatccttttggtcaattt 265  Q
     |||| || ||||||||||||||    
T  35934446 actttaattcttttggtcaattt 35934468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 37728662 - 37728540
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    |||||||||||||  || | ||||||| ||||| || ||||||||||| | || ||| |||||||||||||||   ||  ||||||||| |  ||||||     
T  37728662 taaagtgcattttttcctcctaacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagatttagcttctttgca 37728563  T
Q  243 tctttgatccttttggtcaattt 265  Q
    |||||||||||||| ||||||||    
T  37728562 tctttgatccttttagtcaattt 37728540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 13386013 - 13386142
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaa-cttccaattttggccccataagtataaaaactacaattt-tagtcccctaagatttaaccc 235  Q
    ||||||||||||| ||| |||||| ||||||||||||| ||| ||||||||||||| ||||||  ||||| ||||||| |   ||||||||||||| ||     
T  13386013 aggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcct 13386112  T
Q  236 ctttgcttctttgatccttttggtcaattt 265  Q
    | ||||  ||||| |||||||| |||||||    
T  13386113 cattgcaactttggtccttttgatcaattt 13386142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 3928960 - 3928857
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||| ||||||||||||  || | ||||||||||| || |||| ||||| |||||||| | || ||| | |||| |||||    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccctctatgttttagcccct 3928861  T
Q  238 ttgc 241  Q
    ||||    
T  3928860 ttgc 3928857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 14868889 - 14868964
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattt 214  Q
    ||||||||||||| ||| ||||| || ||||||||| ||| ||||||||||||  ||||||| ||||| |||||||    
T  14868889 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14868964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 14877045 - 14876970
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattt 214  Q
    ||||||||||||| ||| ||||| || ||||||||| ||| ||||||||||||  ||||||| ||||| |||||||    
T  14877045 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 26420324 - 26420410
Alignment:
Q  148 tgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccc 235  Q
    |||| ||||||||  || ||||||||||||| ||||||||| ||| |||||||||||| || ||||||||| || | |||||||||||    
T  26420324 tgcactttccccctatatctttcaaaaacttgcaattttggtccc-taagtataaaaattataattttagttcctttagatttaaccc 26420410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 50909774 - 50909647
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt-agtcccctaagatttaacccct 237  Q
    |||||||||||| |||| || || ||| ||| ||||| || | |||||| | || || ||||||||||||||||||| |  ||| ||||||||| |||||    
T  50909774 ggctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagcccct 50909675  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| |||||||| |||||||    
T  50909674 ttgcatctttggtccttttgatcaattt 50909647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 21177996 - 21178122
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||| | ||||||||| ||||||||| ||| || ||||||||  ||| || | | |||||||||||||||   ||||||| ||||| ||| ||    
T  21177996 aggctaaagtgtactttccccccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagcccttt 21178095  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||  |||||||| |||| | ||||||    
T  21178096 tgcaactttgatcatttttgccaattt 21178122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 46638817 - 46638724
Alignment:
Q  148 tgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    |||||||| || |||||||||||||||| ||  |||||||  ||| || | | ||||| ||||||||||| |||||||||||||  ||||||||    
T  46638817 tgcatttttcctccttaactttcaaaaagttggaattttgatcccctatgaacaaaaattacaattttagccccctaagatttagtccctttgc 46638724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 49306774 - 49306850
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||||||||| |||   |||  ||||||||||||||| |||||||||||   |||||| |||||||||||||||    
T  49306774 aggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaatttt 49306850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 27258057 - 27257960
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 240  Q
    |||| |||| |||| |||||||||||| ||||| || |||||||| |||  ||  || ||||||| ||||||||  ||| ||||||||| ||||||||    
T  27258057 taaaatgcactttctccccttaacttttaaaaagttgcaattttgaccctctatatacaaaaactccaattttaaccccttaagatttagcccctttg 27257960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 48781147 - 48781072
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattt 214  Q
    ||||||||||||| ||| |||||| ||||||||||||| || ||||||||| ||| ||||||  ||||| |||||||    
T  48781147 aggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggtccc-taagtactaaaaccacaattt 48781072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 19487 - 19614
Alignment:
Q  139 aggctaaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||||||| |||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  19487 aggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccct 19586  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| ||||||||| |||||||||||||    
T  19587 ttgcatctttgatcattttggtcaattt 19614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 10007865 - 10007738
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||| |||||||| ||||||||||||||| |||||    
T  10007865 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcccct 10007766  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||| ||||||||    
T  10007765 ttgcatctttggtccttttcgtcaattt 10007738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 10006344 - 10006470
Alignment:
Q  140 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||| ||||| |||||||| | ||||||||||||| ||||||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcccctt 10006443  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| ||||||||||||||||    
T  10006444 tgcatctttggtccttttggtcaattt 10006470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 5513981 - 5514107
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| |||  |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||   ||||||| ||||| ||||||    
T  5513981 aggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagcccctt 5514080  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| |||||||| |||||||    
T  5514081 tgcatctttggtccttttgatcaattt 5514107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 24122882 - 24123008
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||||||| ||||| ||||||| ||||| || |||||||| |||| |||||| |||||||| |||||||||||||||||||||| |  |||    
T  24122882 aggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagcttctt 24122981  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| ||||||||||||||||    
T  24122982 tgcatctttggtccttttggtcaattt 24123008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 1824174 - 1824053
Alignment:
Q  145 aagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgctt 243  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | ||||||||||||| ||  ||||| |    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcat 1824075  T
Q  244 ctttgatccttttggtcaattt 265  Q
    ||||| ||||||||||||||||    
T  1824074 ctttggtccttttggtcaattt 1824053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 1858619 - 1858498
Alignment:
Q  145 aagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgctt 243  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | ||||||||||||| ||  ||||| |    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcat 1858520  T
Q  244 ctttgatccttttggtcaattt 265  Q
    ||||| ||||||||||||||||    
T  1858519 ctttggtccttttggtcaattt 1858498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 22221466 - 22221339
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||| |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||   ||||||||||||| |||||    
T  22221466 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 22221367  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    || | |||||||||||||| | ||||||    
T  22221366 ttacatctttgatccttttagccaattt 22221339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 22227808 - 22227681
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||| |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||   ||||||||||||| |||||    
T  22227808 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 22227709  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    || | |||||||||||||| | ||||||    
T  22227708 ttacatctttgatccttttagccaattt 22227681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 30335638 - 30335765
Alignment:
Q  139 aggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||||||| || ||||||||||| |||||||| |||||||||| |  |||||| ||||| ||||||||||  ||||||||||||| |||||    
T  30335638 aggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagcccct 30335737  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| |||||||| |||||||    
T  30335738 ttgcatctttggtccttttgttcaattt 30335765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 29968434 - 29968312
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||| ||| ||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||| | ||||||||||||||| |||| ||||     
T  29968434 taaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagatttagccccattgca 29968335  T
Q  243 tctttgatccttttggtcaattt 265  Q
     |||| ||| |||||| ||||||    
T  29968334 actttaatcattttggccaattt 29968312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 24123981 - 24123873
Alignment:
Q  157 cccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatcctttt 256  Q
    ||||| |||||||||||||||| ||||||||||| | ||||||  |||| ||||||||||| | ||||||||||| ||||||||| |||||| |||||||    
T  24123981 cccccgtaactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgcatctttggtcctttt 24123882  T
Q  257 ggtcaattt 265  Q
    |||||||||    
T  24123881 ggtcaattt 24123873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 8389787 - 8389672
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||||||| ||||| ||||||||| || ||||||||| ||| || ||| ||||||||||||||||||||||||||||||||||||||| |    
T  8389787 taaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagatttaacccctttac 8389688  T
Q  242 ttctttgatccttttg 257  Q
     | |||| ||||||||    
T  8389687 atttttggtccttttg 8389672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 12353461 - 12353336
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||||||  ||||||| |||||| | ||||||||||||| |||| |    
T  12353461 aggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagta-caaaactataattttggccccctaagatttagccccat 12353363  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||   ||| || ||||||||||||||    
T  12353362 tgcaattttaattcttttggtcaattt 12353336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 22220388 - 22220514
Alignment:
Q  140 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||| |||||| ||||||| ||| |||| |||||||| |||| || ||||||||||||||||||| | ||||||||||||| ||| ||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccatt 22220487  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| |||||||| |||||||    
T  22220488 tgcatctttggtccttttgatcaattt 22220514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 265
Target Start/End: Complemental strand, 18979220 - 18979095
Alignment:
Q  141 gctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    ||||||||||| |||||||||| |||||||||| ||||| ||||||||||||| ||| |||||||||||||||||| | ||| || |||||| ||| |||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccattt 18979121  T
Q  240 gcttctttgatccttttggtcaattt 265  Q
    ||  ||||||||||||| | ||||||    
T  18979120 gcaactttgatcctttttgccaattt 18979095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 18978033 - 18978136
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 251  Q
    ||||||||||| ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||| | ||| ||||||||| |||||||||  ||||||||    
T  18978033 ttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgcaactttgatc 18978131  T
Q  252 ctttt 256  Q
    |||||    
T  18978132 ctttt 18978136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 263
Target Start/End: Complemental strand, 32207425 - 32207302
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| |||||||||| ||| ||||||||||| |||||||| | || |||||| ||||||||||||||| | | | ||||||||| || |||    
T  32207425 aggctaaagtgcactttcccccct-aaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctctt 32207327  T
Q  239 tgcttctttgatccttttggtcaat 263  Q
    ||| |||||| ||||||||||||||    
T  32207326 tgcatctttggtccttttggtcaat 32207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 40471244 - 40471122
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||||||||| |||||||| |||||||| ||||||||| || |||| || ||||||||||||||||| ||| |||||||||||| |||||     
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttggtcc-ataaatacaaaaactacaattttagccccttaagatttaacctctttgt 40471146  T
Q  242 ttctttgatccttttggtcaattt 265  Q
     |||||| || |||||||||||||    
T  40471145 atctttggtcattttggtcaattt 40471122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 11283310 - 11283184
Alignment:
Q  140 ggctaaagtgcattttcccccc-ttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||||||||||||| |||||||||||||| ||  |||||| ||||| || |||||||||  |||||||| ||||||||| ||||| ||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtcccctaaaatttagcccctt 11283211  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||   ||||||| |||| ||||||||    
T  11283210 tgcaattttgatcattttagtcaattt 11283184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 12351920 - 12352013
Alignment:
Q  139 aggctaaagtgcattttcccc-ccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 231  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||||| |||| |||||| |||||||||||||||   |||||||||||||    
T  12351920 aggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagattta 12352013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 1823551 - 1823679
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||| | |||| ||||||||||||| |||||||| |||||||| |||  |||||| ||||||||||||||  ||||||||||||||| ||| |    
T  1823551 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccat 1823650  T
Q  238 ttgc-ttctttgatccttttggtcaattt 265  Q
    |||| || |||| ||||||||| ||||||    
T  1823651 ttgcattttttggtccttttggccaattt 1823679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 1857996 - 1858124
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||| | |||| ||||||||||||| |||||||| |||||||| |||  |||||| ||||||||||||||  ||||||||||||||| ||| |    
T  1857996 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccat 1858095  T
Q  238 ttgc-ttctttgatccttttggtcaattt 265  Q
    |||| || |||| ||||||||| ||||||    
T  1858096 ttgcattttttggtccttttggccaattt 1858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 8388463 - 8388580
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| |||||||||| |||||| ||||| || ||||||| ||||| || ||| |||||||| |||||| | ||||||||||||| ||||||    
T  8388463 aggctaaagtgcactttcccccct-aacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccctt 8388561  T
Q  239 tgcttctttgatccttttg 257  Q
    ||| | |||| ||||||||    
T  8388562 tgcgtttttggtccttttg 8388580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 265
Target Start/End: Original strand, 18970924 - 18971036
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccct-aagatttaacccctttgcttctttgat 250  Q
    ||||||||||| ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||| | ||||| ||||||||||||||||||  ||||| |    
T  18970924 ttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaatttt-gacccctgaagatttaacccctttgcaactttggt 18971021  T
Q  251 ccttttggtcaattt 265  Q
    |||||| | ||||||    
T  18971022 cctttttgccaattt 18971036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 30336602 - 30336476
Alignment:
Q  140 ggctaaagtgcattt-tccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| || | ||||| ||||||||||||||||  |||||| ||| | |||||| ||||||||||||||||  || |||||||||| ||  ||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagccattt 30336503  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| ||||||||||||||||    
T  30336502 tgcatctttggtccttttggtcaattt 30336476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 264
Target Start/End: Original strand, 30568886 - 30569011
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||||||||  ||| ||||||||| || ||||||||  | | || ||| |||||||| ||||||  |||||||||||||| ||||||    
T  30568886 aggctaaagtgcactttccccctctaagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttgatcccctaagatttagcccctt 30568985  T
Q  239 tgcttctttgatccttttggtcaatt 264  Q
    ||| |||||| ||||||||| |||||    
T  30568986 tgcatctttggtccttttggccaatt 30569011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 43661267 - 43661388
Alignment:
Q  142 ctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 240  Q
    |||||||||| |||||  ||||||| ||| ||||| || ||||||||| ||| || ||| |||||||| |||||| | ||||||||||||| ||||||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttg 43661366  T
Q  241 cttctttgatccttttggtcaa 262  Q
    | |||||| | |||||||||||    
T  43661367 catctttggttcttttggtcaa 43661388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 11282011 - 11282134
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||| ||||||||||||| ||||| || ||||||||||||| ||  || |||||  ||||||||   |||||||||||||||||||||||    
T  11282011 taaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccctttgc 11282110  T
Q  242 ttctttgatccttttggtcaattt 265  Q
       ||||||| ||||| |||||||    
T  11282111 aattttgatctttttgatcaattt 11282134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 11287779 - 11287878
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||| | ||| ||||||| |||||||| ||||||||||||  |||||| | ||||||||||||| | ||||||||| ||||| |||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcctttgc 11287878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 24488763 - 24488679
Alignment:
Q  156 ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||| ||||| |||||||| | ||| ||||||||| |||| ||||    
T  24488763 ccccccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaatttt-gccccgtaagatttagccccattgc 24488679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 265
Target Start/End: Original strand, 29043411 - 29043524
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 251  Q
    |||||| |||||||| |||||||| |  | |||||| |||| || ||| |||||||||||||||   || |||||||||| ||||||||  |||||||||    
T  29043411 ttttcctcccttaaccttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaattttttccctctaagatttagcccctttgtatctttgatc 29043510  T
Q  252 cttttggtcaattt 265  Q
    ||||| | ||||||    
T  29043511 cttttagacaattt 29043524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 34625239 - 34625175
Alignment:
Q  201 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||||||||||||| |||||| |||||| || ||| ||  ||||||||||||||||||||||    
T  34625239 aaaaactacaattttagccccctatgatttaccctcttcgcaactttgatccttttggtcaattt 34625175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 43661925 - 43661798
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||| ||||||| |||||| ||||||||||||||||| || |||||||   ||  || ||| |||||||| |||||| | ||||||||||||  |||      
T  43661925 aggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccccctaagatttcgcccaa 43661826  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| |||||||| |||||||    
T  43661825 ttgcatctttggtccttttgatcaattt 43661798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 5003198 - 5003107
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagta-taaaaactacaattttagtcccctaagattta 231  Q
    ||||||||| ||| |||||||||| ||||||||||| ||| |||||||   ||| |||||| ||||||| |||||||| |||||||||||||||    
T  5003198 aggctaaagcgcactttcccccct-aactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaatttt-gtcccctaagattta 5003107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  140 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaa 205  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||||  ||| |||||| |||||    
T  23170098 ggctaaagtgcattttcccccc-taattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 3819489 - 3819541
Alignment:
Q  140 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggcccc 192  Q
    |||||||||||||||| ||||||||| ||||||||  || |||||||||||||    
T  3819489 ggctaaagtgcatttttcccccttaagtttcaaaatgttgcaattttggcccc 3819541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 18488301 - 18488245
Alignment:
Q  201 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttg 257  Q
    ||||||||||||||| | || ||||||| |||||||||||| |||||| ||||||||    
T  18488301 aaaaactacaattttggccctctaagatataacccctttgcatctttggtccttttg 18488245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 32968455 - 32968558
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | || ||| | |||| |||||    
T  32968455 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagcccct 32968554  T
Q  238 ttgc 241  Q
    ||||    
T  32968555 ttgc 32968558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 36249552 - 36249603
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggcc 190  Q
    |||||||||||| |||||||||||||| ||||||||| || |||||||||||    
T  36249552 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcc 36249603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 38980146 - 38980043
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| ||||     
T  38980146 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcccca 38980047  T
Q  238 ttgc 241  Q
    ||||    
T  38980046 ttgc 38980043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 39011243 - 39011140
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| ||||     
T  39011243 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcccca 39011144  T
Q  238 ttgc 241  Q
    ||||    
T  39011143 ttgc 39011140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 45114618 - 45114492
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||| ||||||| |||||| ||| |||||||||||||||| |||||||||  |  || ||| | ||||||||||||| | || ||||||||||||| |     
T  45114618 aggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaatttt-ggcctctaagatttaacctca 45114520  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  |||| ||| ||||||| |||||    
T  45114519 ttgcaactttaatcattttggttaattt 45114492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 38974795 - 38974897
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| |||| |    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccat 38974894  T
Q  239 tgc 241  Q
    |||    
T  38974895 tgc 38974897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 39005893 - 39005995
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| |||| |    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccat 39005992  T
Q  239 tgc 241  Q
    |||    
T  39005993 tgc 39005995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 24483143 - 24483196
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggcccc 192  Q
    |||||||||||| |||||||| | ||| |||||||||||| |||||||||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggcccc 24483196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 45112875 - 45112971
Alignment:
Q  144 aaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    |||||||||||| || || ||||||||||||| ||  |||||| | | | |||||| ||||| || |||||| ||||||||||| ||| |||||||||    
T  45112875 aaagtgcatttttcctccctaactttcaaaaatttgtaattttagtctc-taagtacaaaaattataattttggtcccctaagaattagcccctttgc 45112971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 11456679 - 11456735
Alignment:
Q  209 caattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||| | |||||| |||||| |||| |||| |||||| ||||||||||||||||    
T  11456679 caattttggccccctatgatttagccccattgcatctttggtccttttggtcaattt 11456735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 30570295 - 30570231
Alignment:
Q  201 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||| || |||||| | ||||||||||||| ||| ||||| |||||| ||||||||| ||||||    
T  30570295 aaaaattagaattttggccccctaagatttagcccttttgcatctttggtccttttggccaattt 30570231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 11258913 - 11258786
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||     
T  11258913 aggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagcccca 11258814  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||   |||||||||||||||||||||    
T  11258813 ttgcagatttgatccttttggtcaattt 11258786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 18299373 - 18299499
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||||| ||| |||||||||||||||| ||||||||||| | |||||||||||||||||||||| | |||||| |||||| ||| ||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagcccttt 18299472  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||||||||||||||||||||    
T  18299473 tgcatctttgatccttttggtcaattt 18299499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 18904366 - 18904493
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||| || |||||||| ||| |||||    
T  18904366 aggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagcccct 18904465  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    || | |||||| ||||||||| ||||||    
T  18904466 ttacatctttggtccttttggccaattt 18904493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 38840595 - 38840468
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||| ||||||||||||| ||||     
T  38840595 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagatttagcccca 38840496  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||   ||| ||||||||| |||||||    
T  38840495 ttgcaattttaatccttttgatcaattt 38840468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 264
Target Start/End: Complemental strand, 23869636 - 23869511
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||||||||||| |||||||| ||||||||||||| ||| || |||||||||||||||||  |||||||||||| |||||    
T  23869636 aggctaaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccct 23869538  T
Q  238 ttgcttctttgatccttttggtcaatt 264  Q
    |||| ||||||||||||||| ||||||    
T  23869537 ttgcatctttgatccttttgttcaatt 23869511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 7899984 - 7899857
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||||| | ||||||||||||||| ||||||||||||| ||||     
T  7899984 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagcccca 7899885  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||   |||| ||| |||||||||||||    
T  7899884 ttgtaactttaatctttttggtcaattt 7899857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 22588055 - 22587929
Alignment:
Q  139 aggctaaagtgcattttccccc-cttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||||||| |||| | |||||||||||||||| ||||||||||||| || ||| ||||||||||||||| | ||| ||||||||| |||||    
T  22588055 aggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggcccc-tatgtacaaaaactacaattttggccccttaagatttagcccct 22587957  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||| ||||||    
T  22587956 ttgcatctttggtccttttggccaattt 22587929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 22848190 - 22848317
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||| ||||| |||||||||||||||| ||||||||| ||| ||| || ||||||||||||||| |  |||||||||||| |||||    
T  22848190 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccct 22848289  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||| |||||||| |||||||    
T  22848290 ttgcagctttggtccttttgatcaattt 22848317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 36449777 - 36449896
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||   |||| |||| |||  ||||    
T  36449777 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaattaggccct 36449876  T
Q  238 ttgcttctttgatccttttg 257  Q
    ||||   |||||||||||||    
T  36449877 ttgcaattttgatccttttg 36449896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 18797245 - 18797373
Alignment:
Q  139 aggctaaagtgca-ttttcc-ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 236  Q
    ||||||||||||| |||||| |||| |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||   ||||||| ||||| ||||    
T  18797245 aggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccc 18797344  T
Q  237 tttgcttctttgatccttttggtcaattt 265  Q
    ||||| |||||| ||||||| | ||||||    
T  18797345 tttgcatctttggtccttttagccaattt 18797373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 7898694 - 7898817
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||| ||| | |||||||| ||||||||||||| | ||||||||||||| |||| ||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagccccattgc 7898793  T
Q  242 ttctttgatccttttggtcaattt 265  Q
       ||| ||||||||| |||||||    
T  7898794 aattttaatccttttgatcaattt 7898817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 18906089 - 18905963
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||| | |||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||| ||||||||||||| | | |    
T  18906089 aggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttag-cccctaagatttagctcat 18905991  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| || ||||| |||||||    
T  18905990 ttgcatctttggtctttttgatcaattt 18905963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 38839241 - 38839368
Alignment:
Q  139 aggctaaagtgcattttc-cccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    |||||||||||||||||  ||||||||| |||||||||||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| ||||     
T  38839241 aggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagcccca 38839340  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||   ||| ||| |||||||||||||    
T  38839341 ttgcaattttaatcattttggtcaattt 38839368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 24475224 - 24475350
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||  || || ||| ||||||||||||||||  |||||| ||||| |||||||||||||||||||||| | ||||||  ||||| | | ||    
T  24475224 aggctaaagtgcgcttccctcccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagctcatt 24475323  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| ||||||||||||||||    
T  24475324 tgcatctttggtccttttggtcaattt 24475350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 41878092 - 41878220
Alignment:
Q  140 ggctaaagtgcattttccccccttaactttcaaaaac---ttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 236  Q
    |||||||||||| ||||||||||||||||||||||||   || ||||||||||||| |||||| | ||||||||||||| | ||| ||||||||| ||||    
T  41878092 ggctaaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagcccc 41878191  T
Q  237 tttgcttctttgatccttttggtcaattt 265  Q
     ||||   ||| ||| |||||||||||||    
T  41878192 attgcaattttaatctttttggtcaattt 41878220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 265
Target Start/End: Original strand, 13030293 - 13030415
Alignment:
Q  141 gctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 240  Q
    ||||||||||| ||| |||||| |||||||||||||||  |||||||||||| |||||| ||||| ||||||||| | ||||||||||||| | | ||||    
T  13030293 gctaaagtgcacttttccccct-aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttttgccccctaagatttagctcttttg 13030390  T
Q  241 cttctttgatccttttggtcaattt 265  Q
    | |||||| || |||||||||||||    
T  13030391 catctttggtcattttggtcaattt 13030415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 802692 - 802566
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||| | ||| ||||| ||| |||||||||||| ||||||||||||| |  ||| |||||||||||||||   || ||||||||| |||||||    
T  802692 aggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctt 802593  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| | |||| |||||| |||||||||    
T  802592 tgcatatttggtcctttaggtcaattt 802566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 36451018 - 36450896
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||| ||| |||||| | ||||||||||||  | |||| |||| ||| | |||||||     
T  36451018 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcctttgca 36450919  T
Q  243 tctttgatccttttggtcaattt 265  Q
      |||||||||||||| ||||||    
T  36450918 attttgatccttttggccaattt 36450896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 265
Target Start/End: Complemental strand, 18300822 - 18300700
Alignment:
Q  141 gctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 240  Q
    |||||| |||| ||| |||||| |||||||| |||||| |||||||| |||| |||||| ||||||||||||||| | ||||||  ||||| ||||||||    
T  18300822 gctaaattgcacttttccccct-aactttcataaacttgcaattttgaccccctaagtacaaaaactacaatttt-gacccctataatttagcccctttg 18300725  T
Q  241 cttctttgatccttttggtcaattt 265  Q
    | |||||| ||||||||| ||||||    
T  18300724 catctttggtccttttggacaattt 18300700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 11996750 - 11996833
Alignment:
Q  182 attttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    |||||| |||| || ||| |||||||||||||||||| | |||||||||||||||||| | |||||| ||||||||||||||||    
T  11996750 attttgaccccctatgtacaaaaactacaattttagttctctaagatttaacccctttacatctttggtccttttggtcaattt 11996833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 22587525 - 22587626
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 262  Q
    ||||||||||||| |||||||||||| ||| ||  || ||||||||||||||| | ||||||||||||| || |||||| |||||| ||||||||| |||    
T  22587525 taactttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggccccctaagatttagcctctttgcatctttggtccttttggccaa 22587623  T
Q  263 ttt 265  Q
    |||    
T  22587624 ttt 22587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 41879314 - 41879221
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 231  Q
    |||||||||| || |||| ||||||||| |||||||||||| ||||||||||||| |||||| | ||||||||||||||  ||||||| |||||    
T  41879314 aggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaattta 41879221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 11257621 - 11257747
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||  | ||| |||||||||||||||| |||||||   ||| |||||||||||||||||||||| | | ||||||||||| ||||     
T  11257621 aggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaaccc-taagtataaaaactacaattttggcctcctaagatttagcccca 11257719  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||   ||||||||||||| |||||||    
T  11257720 ttgcaaatttgatccttttgatcaattt 11257747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 13570659 - 13570532
Alignment:
Q  139 aggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||||||| |  ||| |||||||||||||||| ||||||| | ||| |||||| |||||||| |||||| |||||| |||| |||  ||||    
T  13570659 aggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttggtcccccaagaattagtccct 13570560  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    || |  ||||||||||||| | ||||||    
T  13570559 ttacaactttgatcctttttgccaattt 13570532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 28617946 - 28618047
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 262  Q
    |||||||||||| ||| |||||||||||||  ||||| ||||||| ||||||| | ||||||||||||| ||||||||| |||||| |  |||||||| |    
T  28617946 taactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaatttt-gccccctaagatttagcccctttgcatctttggttattttggtcta 28618044  T
Q  263 ttt 265  Q
    |||    
T  28618045 ttt 28618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 1034570 - 1034478
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 231  Q
    |||||||||||| ||||||||||||||||||||||||| | ||||||||||||| || |||  ||||| |||||||    |||||||||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagattta 1034478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 16446153 - 16446256
Alignment:
Q  139 aggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||  || ||||| || |||||||||||||||  | ||| |||| ||||||| |    
T  16446153 aggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttgataccccaagaattaacccat 16446252  T
Q  238 ttgc 241  Q
    ||||    
T  16446253 ttgc 16446256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 265
Target Start/End: Complemental strand, 810854 - 810756
Alignment:
Q  167 tttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    |||||||||||| ||||||||||||| |  ||| |||||||||||||||   || ||||||||| |||||||||| | |||| |||||| | |||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgcatatttggtcctttagatcaattt 810756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 18868923 - 18869000
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||||||| | |||||| ||| |||||||||||||||| ||||||||||| | ||| || |||||||||||||||    
T  18868923 aggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaatttt 18869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 32739647 - 32739699
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    |||||||||||||||| ||||||||||||| || ||| |||||||||||||||    
T  32739647 taactttcaaaaacttgcaattttggccccttatgtacaaaaactacaatttt 32739699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 8534586 - 8534665
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccc 222  Q
    ||||||||  ||| ||||||||| |||||||||||| ||||||||  ||  |||||||| ||||||||||||| ||||||    
T  8534586 taaagtgctcttttcccccttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaattttggtcccc 8534665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 5819814 - 5819741
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaat 212  Q
    ||||||| | ||| ||||||||||||| ||||||||| || | |||||||||||||| | | ||||||||||||    
T  5819814 aggctaaggcgcactttccccccttaagtttcaaaaagttgcgattttggccccatatgaacaaaaactacaat 5819741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 13568000 - 13568048
Alignment:
Q  167 tttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    |||||||||||| ||||||||||||| ||| || |||||||||||||||    
T  13568000 tttcaaaaacttgcaattttggccccctaaatacaaaaactacaatttt 13568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 18869241 - 18869137
Alignment:
Q  163 taactttcaaaaacttc-caattttggccccataagtataaaaactacaattttagtcccctaagatttaaccc-ctttgcttctttgatccttttggtc 260  Q
    ||||||||||||| ||  |||||||||||   |||||| |||||||||||||||  |||||||||||||| |||  ||||| |||||| || ||||| ||    
T  18869241 taactttcaaaaatttggcaattttggccttctaagtacaaaaactacaatttttatcccctaagatttagcccattttgcatctttggtctttttgatc 18869142  T
Q  261 aattt 265  Q
    |||||    
T  18869141 aattt 18869137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 22067821 - 22067757
Alignment:
Q  201 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||||||||||||| ||||||  ||||| || ||| ||  ||||||||||||||||||||||    
T  22067821 aaaaactacaattttagccccctataatttaccctcttcgcaactttgatccttttggtcaattt 22067757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 265
Target Start/End: Complemental strand, 26545596 - 26545496
Alignment:
Q  165 actttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaatt 264  Q
    ||||||||||| || |||||||| |||| ||| || ||||| || ||||||   || |||||||||| ||||||||| |||||| || ||||| ||||||    
T  26545596 actttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagcccctttgcatctttggtcattttgatcaatt 26545497  T
Q  265 t 265  Q
    |    
T  26545496 t 26545496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 11938890 - 11938823
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaa 205  Q
    ||||||||||||| |||||| ||| |||||||||||||||| ||||||||| | | |||||| |||||    
T  11938890 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa 11938823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 26544203 - 26544274
Alignment:
Q  194 taagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    |||||| |||||||||| |||||| | ||||||||||| | ||||||| | |||| |||||||| |||||||    
T  26544203 taagtacaaaaactacagttttagcctcctaagatttagcacctttgcatatttggtccttttgatcaattt 26544274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 21837355 - 21837298
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataag 197  Q
    ||||||||||||| |||  ||||| ||||||||||||||| ||||||||||||| ||||    
T  21837355 aggctaaagtgcactttttcccct-aactttcaaaaacttgcaattttggccccctaag 21837298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 5362187 - 5362247
Alignment:
Q  151 attttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaa 211  Q
    |||||| |||| ||||||||| ||| || | |||||||||||||||| | |||||||||||    
T  5362187 attttcgccccctaactttcacaaagttgcgattttggccccataagaaaaaaaactacaa 5362247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 18487004 - 18486877
Alignment:
Q  139 aggctaaagtgcattttcccccc-ttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||| |||| |||||||| | ||||||||||||| |||||    
T  18487004 aggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccct 18486905  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||||||||||    
T  18486904 ttgcatctttggtccttttggtcaattt 18486877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 25523068 - 25523195
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||   ||||||||||||| |||||    
T  25523068 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccct 25523167  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| ||||||||||||||| |||||||    
T  25523168 ttgcatctttgatccttttgatcaattt 25523195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 16650957 - 16650830
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||||||||||| |||||||| |||||||| |||| |||||||||||||||||||||||| |||||||| |||| ||| |    
T  16650957 aggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcccat 16650858  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||||||||||    
T  16650857 ttgcatctttggtccttttggtcaattt 16650830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 28538675 - 28538802
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||| |||||||||||||||| |||||||| |||| |||||| ||||||||||||||||| ||||||||||||| |||||    
T  28538675 aggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccct 28538774  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||||||||||| ||||||||    
T  28538775 ttgcaactttgatcctttttgtcaattt 28538802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 19752911 - 19753037
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||||| | |||||| |||||| |||| |    
T  19752911 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccat 19753010  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| ||||||||||||||||    
T  19753011 tgcatctttggtccttttggtcaattt 19753037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 22940723 - 22940598
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||||| | ||||||| ||||| ||||||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaatttt-gacccctaaaatttagcccctt 22940625  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    | | ||||| |||||||||||||||||    
T  22940624 ttcatcttttatccttttggtcaattt 22940598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 24332916 - 24333039
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||| || ||| |||||||||||||||   || ||||||||||||||||||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 24333015  T
Q  242 ttctttgatccttttggtcaattt 265  Q
     |||||| ||||||||||||||||    
T  24333016 atctttggtccttttggtcaattt 24333039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 36486590 - 36486463
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||| ||||||| |||| ||||| ||||||| |||||||| |||||||| |||| |||||| ||||||||||||||| |||||||||||||||  ||||    
T  36486590 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccct 36486491  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||||||||||| ||||||||    
T  36486490 ttgcaactttgatcctttttgtcaattt 36486463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 28539917 - 28539795
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||||||| ||||| ||||||| |||||||| |||||||| |||  |||||| ||||||||||||||| |||||||||||||||  ||||||||     
T  28539917 taaagtgcatttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttagtccctttgca 28539818  T
Q  243 tctttgatccttttggtcaattt 265  Q
     ||||||||||||| | ||||||    
T  28539817 actttgatcctttttgccaattt 28539795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 42195137 - 42195258
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||| ||| ||||||||||||| ||||| || | ||||||||||| || ||| |||| |||||||||| ||||||||||||||| |||||||||     
T  42195137 taaagtgcacttttcccccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgca 42195235  T
Q  243 tctttgatccttttggtcaattt 265  Q
    |||||| ||||||||||||||||    
T  42195236 tctttggtccttttggtcaattt 42195258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 19754233 - 19754113
Alignment:
Q  139 aggctaaagtgcattttc--cccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 236  Q
    |||||||||||||||||   ||||| |||||||||||||||| ||||||||||||| ||| || ||||||||||||||| | |||||| |||||| ||||    
T  19754233 aggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagcccc 19754134  T
Q  237 tttgcttctttgatccttttg 257  Q
     |||| |||||| ||||||||    
T  19754133 attgcatctttggtccttttg 19754113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 36485302 - 36485426
Alignment:
Q  142 ctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 240  Q
    |||||||||||||| || ||| ||||||| |||||||| |||||||| || | |||||| |||||||| |||||| | ||||||||||||||||||||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttg 36485401  T
Q  241 cttctttgatccttttggtcaattt 265  Q
    |  |||||||| |||| ||||||||    
T  36485402 caactttgatcatttttgtcaattt 36485426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 42196302 - 42196175
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||  ||||||| ||||| ||   | ||||||||  || ||| |||||||||| |||||||||||||||||||| ||| |    
T  42196302 aggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttagcccat 42196203  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||||||||||    
T  42196202 ttgcatctttggtccttttggtcaattt 42196175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 33160388 - 33160311
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||| |||||||| |||||||||||||    
T  33160388 aggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaatttt 33160311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 18485137 - 18485271
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaa-------ttttagtcccctaagattt 230  Q
    ||||||||||||| |||  ||||| ||||||| |||||||| ||||||||||||| ||||||| ||||| ||||       |||| | ||||||||||||    
T  18485137 aggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgggttttggccccctaagattt 18485236  T
Q  231 aacccctttgcttctttgatccttttggtcaattt 265  Q
    | ||||||||| ||||||||||||||||| |||||    
T  18485237 agcccctttgcatctttgatccttttggttaattt 18485271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 25055411 - 25055538
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| ||||||| ||   ||| ||||||||  ||| || ||||||||||||||||||| | ||||||||||||| ||| |    
T  25055411 aggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagcccat 25055510  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| |||||||| |||||||    
T  25055511 ttgcatctttggtccttttgatcaattt 25055538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 40255774 - 40255671
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||| ||||| ||| |||||||| |||||||| |||| ||| || | ||||||||||||| | ||||||||||||||||||     
T  40255774 aggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaacccca 40255675  T
Q  238 ttgc 241  Q
    ||||    
T  40255674 ttgc 40255671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 1796054 - 1796156
Alignment:
Q  140 ggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||||||| || ||| |||||||||||||||| ||| ||||||| | |||||| |||||||||||||||  ||||| |||| ||||||| ||    
T  1796054 ggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttgatcccccaagaattaacccatt 1796153  T
Q  239 tgc 241  Q
    |||    
T  1796154 tgc 1796156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 2186774 - 2186896
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    |||||||||||||  |||| ||| ||||||||| || ||||||||| |   || ||| |||||||||||||||| |||||||||||||| ||  ||| |     
T  2186774 taaagtgcattttttccccctaagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaattttaatcccctaagatttagccattttaca 2186873  T
Q  243 tctttgatccttttggtcaattt 265  Q
    |||||| ||||||||||||||||    
T  2186874 tctttggtccttttggtcaattt 2186896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 5777900 - 5778017
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||| |||| ||||||  ||||| |||||||    ||||||||||||| |||| |    
T  5777900 aggctaaagtgcactttcccccct-aactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5777998  T
Q  239 tgcttctttgatccttttg 257  Q
    |||  ||||| ||||||||    
T  5777999 tgcaactttggtccttttg 5778017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 21835040 - 21835162
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||||||||  ||| ||| ||||| ||   |||||| |||| || ||| |||||||||||||||   ||||||||||||||||||||    
T  21835040 aggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttgaccccctaagatttaacccctt 21835139  T
Q  239 tgcttctttgatccttttggtca 261  Q
    |||  ||||||||||||| ||||    
T  21835140 tgcaactttgatccttttagtca 21835162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 25056482 - 25056390
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 231  Q
    |||||||||||| |||||| | | |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||   |||||||||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagattta 25056390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 5778938 - 5778819
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||| ||||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  5778938 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 5778839  T
Q  238 ttgcttctttgatccttttg 257  Q
    ||||  ||||| ||||||||    
T  5778838 ttgcaactttggtccttttg 5778819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 7311607 - 7311682
Alignment:
Q  156 ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 231  Q
    |||||| |||||||||||||||| |||| |||||| |  ||||| ||||||||||||||||| |||||||||||||    
T  7311607 ccccccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagattta 7311682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 16650047 - 16650118
Alignment:
Q  194 taagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    |||||| |||||||||||||||   || |||||||||||||||||||| |||||| ||||||||||||||||    
T  16650047 taagtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaattt 16650118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 5730934 - 5730837
Alignment:
Q  168 ttcaaaaacttccaattttggccccataagtataaaaactacaattttagt-cccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||||||||||||||||||||| ||||||  ||||| |||| |||||| |||||||||||||||||| ||||  ||||| | |||||| |||||||    
T  5730934 ttcaaaaacttccaattttggccccctaagtaccaaaaccacaa-tttagtccccctaagatttaaccccattgcaactttggttcttttgatcaattt 5730837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 25524158 - 25524073
Alignment:
Q  180 caattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||||||| | |||||| |||||||| ||||||   ||||||||||||| ||||||||| |||||  ||||||||||||||||    
T  25524158 caattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgcatctttagtccttttggtcaattt 25524073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 1797398 - 1797287
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||| |||||  ||| |||| ||| |||||||| |||||||||| || ||   | ||||||||||||||| ||||| ||||||||| ||||||    
T  1797398 aggctaaagtggattttttccctttaagttttaaaaacttgcaattttggctccttataaacaaaaactacaattttggtcccttaagatttagcccctt 1797299  T
Q  239 tgcttctttgat 250  Q
    |||  |||||||    
T  1797298 tgcaactttgat 1797287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 20214196 - 20214271
Alignment:
Q  140 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    |||||||||||| ||| |||||||||||||||||||||| ||||||| || |  || ||| |||||||||||||||    
T  20214196 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaatttt 20214271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 18154513 - 18154569
Alignment:
Q  158 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||    
T  18154513 ccccttaactttcaaaaacttacaattttgacccc-taagtacaaaaactacaatttt 18154569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 33158097 - 33158174
Alignment:
Q  139 aggctaaagtgcattttcc-ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||||| | || |||||| |||||||||||||||    
T  33158097 aggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaatttt 33158174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 5961476 - 5961524
Alignment:
Q  209 caattttagtcccctaagatttaacccctttgcttctttgatccttttg 257  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||||||    
T  5961476 caattttagccccctaaaatttaacccctttgcatctttgatccttttg 5961524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 20216861 - 20216762
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||| || || ||  || ||||||||||||||| | |||| |||| ||| ||| |||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagcccatttgc 20216762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 5730440 - 5730517
Alignment:
Q  139 aggctaaagtgcatttt--ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattt 214  Q
    ||||||||||||| |||  ||||||||||||||||||||||| ||||||||||  | ||||||  ||||| |||||||    
T  5730440 aggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 1015497 - 1015601
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 251  Q
    |||||| ||| ||||||| ||||| || ||||||||||||| |  ||| |||| |||||||||||  ||||||||| |||  |||||||| | |||| ||    
T  1015497 ttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaattagtccctttgcatatttggtc 1015596  T
Q  252 ctttt 256  Q
    |||||    
T  1015597 ctttt 1015601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 25524230 - 25524152
Alignment:
Q  139 aggctaaagtgcatttt--ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||||||||| |||  |||||| ||| ||| ||||| ||  |||||||||||| |||||| |||||||||||||||    
T  25524230 aggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaatttt 25524152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 34893689 - 34893739
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaatt 213  Q
    |||||||||||||||| |||||||||| || || ||| |||||||||||||    
T  34893689 taactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 2685763 - 2685820
Alignment:
Q  158 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    |||| ||| ||||||||||||  |||||||| ||| |||||| |||||||||||||||    
T  2685763 ccccctaattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 7758401 - 7758528
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  7758401 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccct 7758500  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||  |||||| ||||||||||||||||    
T  7758501 ttgtatctttggtccttttggtcaattt 7758528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 54540892 - 54540765
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||| | ||||||||||||| |||||    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccct 54540793  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||||||||||| ||||||||    
T  54540792 ttgcaactttgatcctttttgtcaattt 54540765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 46719941 - 46720067
Alignment:
Q  140 ggctaaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||||||| |||||||||||||| ||||| || | ||||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagcccatt 46720040  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| | |||| ||||||||||||||||    
T  46720041 tgcatatttggtccttttggtcaattt 46720067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 19984848 - 19984975
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||| ||| |||||||||||| ||||||||||||| || ||| |||||||||||||||   ||  |||||||||||||||    
T  19984848 aggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccct 19984947  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||||||||||    
T  19984948 ttgcatctttggtccttttggtcaattt 19984975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 7267647 - 7267769
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||||||| |||||| | ||||||||||||| | ||||||||||||| || | ||||     
T  7267647 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcctcattgca 7267746  T
Q  243 tctttgatccttttggtcaattt 265  Q
     |||| |||||||||||||||||    
T  7267747 actttaatccttttggtcaattt 7267769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 12700174 - 12700299
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||   |||||| |||||| || | |    
T  12700174 aggctaaagtgcactttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagccacat 12700272  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| ||||||||||||||||    
T  12700273 tgcatctttggtccttttggtcaattt 12700299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 55192096 - 55191970
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||| | |||  |||| ||||||||||    
T  55192096 aggctaaagtgtattttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctt 55191997  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||   ||||||| |||| ||||||||    
T  55191996 tgcaattttgatcatttttgtcaattt 55191970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 23770505 - 23770385
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||||| |||||||| ||| ||||| || ||||||||| ||| || ||| ||||||||||||||||| |||||||||||||||||||||||    
T  23770505 taaagtgcaattttctccccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagccccctaagatttaacccctttgc 23770406  T
Q  242 ttctttgatccttttggtcaa 262  Q
     |||||  |||||||||||||    
T  23770405 atctttagtccttttggtcaa 23770385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 29931225 - 29931328
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||| |||||||||||||||| ||||||| ||||| ||| || ||||||||||||||| | |||||||||||||||||||    
T  29931225 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccct 29931324  T
Q  238 ttgc 241  Q
    ||||    
T  29931325 ttgc 29931328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 29980379 - 29980482
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||| |||||||||||||||| ||||||| ||||| ||| || ||||||||||||||| | |||||||||||||||||||    
T  29980379 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccct 29980478  T
Q  238 ttgc 241  Q
    ||||    
T  29980479 ttgc 29980482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 19986174 - 19986045
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggcccca--taagtataaaaactacaattttagtcccctaagatttaaccc 235  Q
    ||||||||||||| |||||||| ||||| |||||||||||| |||||||||||||   || |||||||||||||||||||   || ||||||||||||||    
T  19986174 aggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaaccc 19986075  T
Q  236 ctttgcttctttgatccttttggtcaattt 265  Q
    |||||| |||||| || ||| |||||||||    
T  19986074 ctttgcatctttggtcatttcggtcaattt 19986045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 47614185 - 47614311
Alignment:
Q  140 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||  ||||| |||||||||||||||| ||||||||||||| ||||||| ||||| |||||||| | ||||||||||||| || |||    
T  47614185 ggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcctctt 47614284  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| | |||||||| |||||    
T  47614285 tgcatctttggtgcttttggttaattt 47614311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 34019227 - 34019120
Alignment:
Q  158 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttg 257  Q
    ||||||||||||||||||||| |||||||| |||| || ||| ||| ||||||||||| ||||||||| ||||| | | ||||| |||||| ||||||||    
T  34019227 ccccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagctcatttgcatctttggtccttttg 34019128  T
Q  258 gtcaattt 265  Q
    ||||||||    
T  34019127 gtcaattt 34019120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 46721322 - 46721195
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||| |||| ||||||| ||||| || | |||||  |||| || ||| ||||||||||||||||||||||||||||||| |||||    
T  46721322 aggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcccct 46721223  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| | |||| ||||| ||||||||||    
T  46721222 ttgcatatttggtccttctggtcaattt 46721195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 54539754 - 54539881
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||||  |||| ||| || |||||||||||||||  |||||||||||||| | | |    
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagctcat 54539853  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||||||||||| | ||||||    
T  54539854 ttgcaactttgatcctttttgccaattt 54539881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 7268924 - 7268802
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||| ||| ||||| |||||||||||||||| ||||||||||| | |||||||| ||||||||||||| | | |||||||||||  ||| ||||     
T  7268924 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttagtcccattgca 7268825  T
Q  243 tctttgatccttttggtcaattt 265  Q
      ||| ||||||||| |||||||    
T  7268824 attttaatccttttgatcaattt 7268802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 11671442 - 11671316
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| |||  || | |||||||||||||||| ||||||| ||||| ||| |||||||||||||  |||   |||||| |||||||||||||    
T  11671442 aggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgatttaacccctt 11671343  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    | | |||||| |||||||| |||||||    
T  11671342 tacatctttggtccttttgatcaattt 11671316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 51469972 - 51470098
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||||||| || ||| |||||||||||| ||||||||||||| ||||||  ||||| ||||||| |  ||||||||||||| |||| |    
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagccccat 51470071  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||  ||||| |||||||| |||||||    
T  51470072 tgcaactttggtccttttgatcaattt 51470098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 265
Target Start/End: Original strand, 8456479 - 8456603
Alignment:
Q  141 gctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 240  Q
    ||||||||||| |||  |||| ||| |||||||||||| ||||||||| ||| ||| || ||||||||||||||| | ||||||||||||| || | |||    
T  8456479 gctaaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcctcattg 8456578  T
Q  241 cttctttgatccttttggtcaattt 265  Q
    |   |||||||||||| ||||||||    
T  8456579 caaatttgatccttttagtcaattt 8456603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 24516459 - 24516563
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    |||| |||||||| |||| ||||| ||||||| |||||||| |||||||||| || |||||||||||||||||||||| | ||| ||||||||| | |||    
T  24516459 aggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcct 24516558  T
Q  238 ttgct 242  Q
    |||||    
T  24516559 ttgct 24516563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 22776914 - 22776811
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||| ||||||||| ||| || ||||||||||||| || ||| ||||||||||||||| | ||||||||| ||| |||||    
T  22776914 aggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaattagcccct 22776815  T
Q  238 ttgc 241  Q
    ||||    
T  22776814 ttgc 22776811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 29932800 - 29932698
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||   ||| |||||||||  ||||    
T  29932800 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtacaaaaactacaattttgaccccttaagatttagtccct 29932702  T
Q  238 ttgc 241  Q
    ||||    
T  29932701 ttgc 29932698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 29981954 - 29981852
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||   ||| |||||||||  ||||    
T  29981954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtacaaaaactacaattttgaccccttaagatttagtccct 29981856  T
Q  238 ttgc 241  Q
    ||||    
T  29981855 ttgc 29981852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 257
Target Start/End: Original strand, 31645000 - 31645091
Alignment:
Q  166 ctttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttg 257  Q
    ||||||||||||| ||||||||||||| |||||  ||||||||||||||||  | ||||||||||| ||| ||||| |||||| ||||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgcatctttggtccttttg 31645091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 47609696 - 47609815
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    |||||||| |||| |||||||||| |||||||||||||||| |||||||| |||| ||||||  ||||| ||||||| |  ||||||||||||| ||||     
T  47609696 aggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcccca 47609795  T
Q  238 ttgcttctttgatccttttg 257  Q
    ||||  ||||| ||||||||    
T  47609796 ttgcaactttggtccttttg 47609815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 12703601 - 12703483
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| |||  |||  ||||||||||||| ||  |||||||||||| |||||| ||||||||||||||| | |||||| |||||| |||| |    
T  12703601 aggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccat 12703502  T
Q  239 tgcttctttgatccttttg 257  Q
    ||| |||||| || |||||    
T  12703501 tgcatctttggtcattttg 12703483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 51037536 - 51037637
Alignment:
Q  140 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    |||||||||||| ||| | ||||||||||||||||| || |||||||| |||  || | | ||||||||||||||||| ||||||||| ||| |||||||    
T  51037536 ggctaaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagccccttt 51037635  T
Q  240 gc 241  Q
    ||    
T  51037636 gc 51037637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 534498 - 534625
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||  ||||| ||||| |||||||||| |||||||| || | || ||| ||||||||||||||| | ||||||||||||| ||  |    
T  534498 aggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcctat 534597  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||| ||||| ||||||    
T  534598 ttgcatctttggtccatttggccaattt 534625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 47610678 - 47610563
Alignment:
Q  143 taaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| |||| ||||    
T  47610678 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 47610579  T
Q  242 ttctttgatccttttg 257  Q
      ||||| ||||||||    
T  47610578 aactttggtccttttg 47610563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 47615650 - 47615591
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataag 197  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  47615650 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 535883 - 535791
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 231  Q
    |||||||||| | |||||| ||| |||||||||||||||| ||||||||| ||| ||||||| ||||||| ||||||   |||||||||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagattta 535791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 8875905 - 8876032
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||| |||||||| ||  |||||  | ||||||| ||||| || ||| ||||||||||||||| | ||||||||||||| ||  |    
T  8875905 aggctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagccaat 8876004  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| | |||| ||||||| ||||||||    
T  8876005 ttgcatatttggtccttttagtcaattt 8876032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 51038892 - 51038789
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||||||||||| ||||| || |||||||| |||| || | | ||||||||||||||| ||||| ||||| ||  |||||    
T  51038892 aggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttggtcccttaagaattgtcccct 51038793  T
Q  238 ttgc 241  Q
    ||||    
T  51038792 ttgc 51038789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 5029784 - 5029666
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| ||||| || ||||||||| ||| ||||||||||| | ||||||  ||||| ||||||||   ||||||||| ||| |||| |    
T  5029784 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagccccat 5029685  T
Q  239 tgcttctttgatccttttg 257  Q
    ||||| |||  ||||||||    
T  5029684 tgcttatttcgtccttttg 5029666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 52840705 - 52840603
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||  |||||| ||| |||||||||||||||| |||||||||| || ||| ||| ||||| ||||||||   ||||||||||||| |||| |    
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagccccat 52840606  T
Q  239 tgc 241  Q
    |||    
T  52840605 tgc 52840603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 53614818 - 53614895
Alignment:
Q  139 aggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||| | ||  ||  ||||||||||||||||||    
T  53614818 aggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaatttt 53614895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 40426877 - 40426753
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaactt-ccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 240  Q
    ||||||||| |||||||||||||||||| ||||| || | ||||| |||||| ||  || ||||| ||||||||| | |||||| |||||| | ||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgatttagctcctttg 40426778  T
Q  241 cttctttgatccttttggtcaattt 265  Q
      |||||| |||||||||| |||||    
T  40426777 tgtctttggtccttttggttaattt 40426753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 47615608 - 47615552
Alignment:
Q  209 caattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||| | ||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  47615608 caattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattt 47615552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 265
Target Start/End: Original strand, 4271463 - 4271566
Alignment:
Q  162 ttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtca 261  Q
    |||||||||||||| ||  |||||||  | | ||| ||||||||||||||||||||   | ||||||||| ||| |||||  ||||||||||||| ||||    
T  4271463 ttaactttcaaaaatttgtaattttgatctcttaaatataaaaactacaattttagcatcttaagatttagcccatttgcaactttgatcctttttgtca 4271562  T
Q  262 attt 265  Q
    ||||    
T  4271563 attt 4271566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 49216247 - 49216373
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccc-taagatttaacccct 237  Q
    |||||||||||| |||||| | | ||| ||||||||| || |||||||| |||| || ||| ||||||||||||| | |||||| ||||||||| | | |    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattat-gtccccttaagatttagctcat 49216345  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| ||||||||| |||||| ||||||    
T  49216346 ttgcatctttgatcattttggccaattt 49216373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 6249633 - 6249734
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 262  Q
    |||||||||||||||| |||||||   ||| |||||| |||||||||||||||| |||| |||||||||  | | ||||   ||||||||||||| ||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttta-tcccttaagatttagtctcattgcaaatttgatccttttgatcaa 6249731  T
Q  263 ttt 265  Q
    |||    
T  6249732 ttt 6249734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 51470556 - 51470430
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| | | ||||| |||||||||||||||| |||||| |  ||| ||||||  ||||| |||||||    ||||||||||||| | || |    
T  51470556 aggctaaagtgcactcttcccccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaatttagcacccctaagatttagctccat 51470457  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||  ||||| |||||||| |||||||    
T  51470456 tgcaactttggtccttttgatcaattt 51470430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 54987103 - 54986982
Alignment:
Q  143 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 242  Q
    ||||||||| ||| |||||| || ||||||||| || | ||||| | ||| || |||||||||||| ||||||   || |||||||||| | |||||||     
T  54987103 taaagtgcacttttccccct-aagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaagatttagctcctttgca 54987005  T
Q  243 tctttgatccttttggtcaattt 265  Q
    ||||||||| |||||| ||||||    
T  54987004 tctttgatcattttggccaattt 54986982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 784987 - 784930
Alignment:
Q  200 taaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttg 257  Q
    ||||||||||||||||| ||| |||| |||||||| |||||| ||||||||| |||||    
T  784987 taaaaactacaattttaatcctctaaaatttaacctctttgcatctttgatcattttg 784930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 265
Target Start/End: Original strand, 11670397 - 11670510
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 251  Q
    |||| ||| ||||| ||||||||| || ||||||| | ||| ||||||||||||||| |||||| ||||| || ||||||  ||| |||| | |||  ||    
T  11670397 tttttcccgcttaattttcaaaaatttgcaattttagtcccctaagtataaaaactataattttggtcccttatgatttagtcccattgcattttttgtc 11670496  T
Q  252 cttttggtcaattt 265  Q
    |||||| |||||||    
T  11670497 cttttgatcaattt 11670510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 5001199 - 5001275
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattt 214  Q
    ||||||||||||| |||||| ||| || ||||||||| ||| ||||||||||||| ||||||  ||||| |||||||    
T  5001199 aggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 23769856 - 23769982
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||| ||||||| |||||| |||||||||||||| || || |||||||   ||  || ||  ||||||||||||||| | ||||||||||||  | | |    
T  23769856 aggctgaagtgcacttttccacccttaactttcaacaagttgcaattttaatcctctatgtgcaaaaactacaatttt-gacccctaagatttcgctcat 23769954  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||||||||||    
T  23769955 ttgcatctttggtccttttggtcaattt 23769982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 52839036 - 52839163
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| |||||| |||||| ||  ||||||| |||  ||||||  ||||| |||||||||  || |||| ||||| ||||     
T  52839036 aggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagcccca 52839135  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||   ||| |||||||||||||||||    
T  52839136 ttgcaaatttcatccttttggtcaattt 52839163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 28262192 - 28262294
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| ||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| |||| |    
T  28262192 aggctaaagtgcacttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccat 28262291  T
Q  239 tgc 241  Q
    |||    
T  28262292 tgc 28262294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 6170296 - 6170349
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaatttta 216  Q
    |||||||||||||||| ||||||||  ||| |||||| ||||| ||||||||||    
T  6170296 taactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttta 6170349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 18442629 - 18442733
Alignment:
Q  139 aggctaaagtgcattttcccccct--taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 236  Q
    ||||||||||||| |||||||||   ||||||||||||  || | |||||||||||  | |||| |||||||||||||| | |||||| | |||| ||||    
T  18442629 aggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatgttttagcccc 18442728  T
Q  237 tttgc 241  Q
     ||||    
T  18442729 attgc 18442733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 19487703 - 19487807
Alignment:
Q  139 aggctaaagtgcattttcccccct--taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 236  Q
    ||||||||||||| |||||||||   ||||||||||||  || | |||||||||||  | |||| |||||||||||||| | |||||| | |||| ||||    
T  19487703 aggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatgttttagcccc 19487802  T
Q  237 tttgc 241  Q
     ||||    
T  19487803 attgc 19487807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 51347271 - 51347392
Alignment:
Q  143 taaagtgcattttccccc-cttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||||||| ||||| ||| ||||| || ||||||||| ||  || | | |||||  ||||||||   ||||||||||||||||| |||||    
T  51347271 taaagtgcactttccccctcttaagtttgaaaaagttgcaattttggtcctctatgaacaaaaatgacaattttgaccccctaagatttaacccgtttgc 51347370  T
Q  242 ttctttgatccttttggtcaat 263  Q
      |||||||| ||||| |||||    
T  51347371 aactttgatcattttgatcaat 51347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 7500454 - 7500580
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||  ||  |||||||| |||| |||||||| | ||||||||||||| ||||||    
T  7500454 aggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcccctt 7500553  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||||||||||||||||||||    
T  7500554 tgcatctttgatccttttggtcaattt 7500580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 18371424 - 18371550
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||||||| | |||||||||||||||| ||||||||||||| |||||| ||||||||||||||| | ||||||||||||| | | ||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagcacatt 18371523  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||||||||||||||||||||    
T  18371524 tgcatctttgatccttttggtcaattt 18371550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 7501954 - 7501827
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||| ||||| |||||||| | ||| |||||| || |||||    
T  7501954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccct 7501855  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||||||||||    
T  7501854 ttgcatctttggtccttttggtcaattt 7501827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 22630554 - 22630427
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||||||||||||| ||| || ||||||||||||||||| ||||||||||| | || ||    
T  22630554 aggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcctct 22630455  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||  |||||| ||||||||||||||||    
T  22630454 ttgtatctttggtccttttggtcaattt 22630427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 265
Target Start/End: Complemental strand, 18372544 - 18372432
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 251  Q
    ||||||||||| || |||||||||||| ||||||||||||| |||||| ||||||||||||||| | ||||||||||||| ||||||||  |||||| ||    
T  18372544 ttttcccccct-aattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttgtatctttggtc 18372446  T
Q  252 cttttggtcaattt 265  Q
    ||||||||||||||    
T  18372445 cttttggtcaattt 18372432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 22629482 - 22629612
Alignment:
Q  139 aggctaaagtgcattttcccccct----taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacc 234  Q
    ||||||||||||||||| ||||||    ||| ||||||||||||  |||||||||| | |||||| ||||||||||||||| | ||||||||||||| ||    
T  22629482 aggctaaagtgcatttttccccctcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcc 22629581  T
Q  235 cctttgcttctttgatccttttggtcaattt 265  Q
    ||||||| |||||| ||||||||||||||||    
T  22629582 cctttgcatctttggtccttttggtcaattt 22629612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 31659622 - 31659749
Alignment:
Q  140 ggctaaagtgcatttt--ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    |||||||||||| |||  |||||| |||||||||||||||| |||||||| |||| |||||| ||||||||||||||| | ||||||||||||| ||||     
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccca 31659721  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||   |||||||||||||||||||||    
T  31659722 ttgcaaatttgatccttttggtcaattt 31659749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 42886384 - 42886261
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||||| || | ||||||||||||| || |||||||| |||| ||| || ||||||||||||||||| ||||||||||||| ||| |||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccatttgc 42886285  T
Q  242 ttctttgatccttttggtcaattt 265  Q
     ||||||||| |||||||||||||    
T  42886284 atctttgatcattttggtcaattt 42886261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 3227696 - 3227569
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  3227696 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagcccca 3227597  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||| |||||||| |||||||    
T  3227596 ttgcaactttggtccttttgatcaattt 3227569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 14999249 - 14999130
Alignment:
Q  145 aagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttc 244  Q
    ||||||| ||| ||||| ||| |||||||| ||| |||||||| |||| ||| || ||||||||||||||| |  |||||||||||| ||||||||| ||    
T  14999249 aagtgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgcatc 14999151  T
Q  245 tttgatccttttggtcaattt 265  Q
    |||| |||||| |||||||||    
T  14999150 tttgttcctttaggtcaattt 14999130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 17781663 - 17781779
Alignment:
Q  142 ctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 240  Q
    |||||||||| |||||||||| |||||||||||||||| |||||||| |||| ||||||  ||||| ||||||| |  ||||||||||||| |||| |||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattg 17781762  T
Q  241 cttctttgatccttttg 257  Q
    |  ||||| ||||||||    
T  17781763 caactttggtccttttg 17781779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 31661111 - 31660991
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||| || ||||||||||||| || |||||||| |||  || ||| |||||||| |||||||||||||||| |||||||| |     
T  31661111 aggctaaagtgcactttcccctctctaactttcaaaaatttgcaattttgaccctttacgtacaaaaactataattttagtcccctaaaatttaacctca 31661012  T
Q  238 ttgcttctttgatccttttgg 258  Q
    ||||   ||||||||||||||    
T  31661011 ttgcaaatttgatccttttgg 31660991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 31949321 - 31949448
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||| || ||| |||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  31949321 aggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 31949420  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||| |||||||| |||||||    
T  31949421 ttgcaactttggtccttttgatcaattt 31949448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 31949904 - 31949777
Alignment:
Q  139 aggctaaagtgcatt-ttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| | |||||||| |||||||||||||||| ||||||||||||| ||| ||  ||||| |||||||    ||||||||||||| ||||     
T  31949904 aggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaagatttagcccca 31949805  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||| |||||||| |||||||    
T  31949804 ttgcaactttggtccttttgatcaattt 31949777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 127336 - 127453
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||||||||| ||| ||||||  ||||| |||| ||||| ||||||||||||| |||  |    
T  127336 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaa-tttagccccctaagatttagcccaat 127434  T
Q  239 tgcttctttgatccttttg 257  Q
    |||  ||||| ||||||||    
T  127435 tgcaactttggtccttttg 127453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 11658378 - 11658480
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    |||||||| |||| ||||||||||||||||||||||||| | ||||||| ||||| || ||| ||||||||||||||| |||||  |||| ||| |||||    
T  11658378 aggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttggtccctcaagaattagcccct 11658477  T
Q  238 ttg 240  Q
    |||    
T  11658478 ttg 11658480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 21505415 - 21505540
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| |||||| |||||||||||| || | |||||||||||  |  || |||||||||||||||   ||| ||||||||| ||||||    
T  21505415 aggctaaagtgcacttttccccct-aactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccctt 21505513  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| ||||||||| ||||||    
T  21505514 tgcatctttggtccttttggacaattt 21505540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 30439459 - 30439357
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| |||| |||||||||||||||||| || | ||||||    | || ||  ||||||||||||||||||||||||||||||| ||||||    
T  30439459 aggctaaagtgcactttctccccttaactttcaaaaagttacgattttgatttcctatgttcaaaaactacaattttagtcccctaagatttagcccctt 30439360  T
Q  239 tgc 241  Q
    |||    
T  30439359 tgc 30439357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 47369805 - 47369907
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 262  Q
    |||||||||||||||| ||||||| ||| |||||||| |||||||| |||||| | ||| ||||||||| ||||||||| |||||  |  ||||||||||    
T  47369805 taactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcccctttgcatctttagttattttggtcaa 47369904  T
Q  263 ttt 265  Q
    |||    
T  47369905 ttt 47369907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 47525468 - 47525350
Alignment:
Q  140 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||| |||||| |||||||||||||||| ||||||| ||||| ||||||| ||||| |||||||    ||||||||||||| |||| |    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagccccat 47525369  T
Q  239 tgcttctttgatccttttg 257  Q
    |||  ||||| ||||||||    
T  47525368 tgcaactttggtccttttg 47525350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 3227109 - 3227225
Alignment:
Q  141 gctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccc-taagatttaaccccttt 239  Q
    ||||||||||| ||||||||| ||| |||||||||||| ||||||||||||| ||||||  ||||| |||| ||||| |||| ||||||||| |||| ||    
T  3227109 gctaaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagcccccttaagatttagccccatt 3227207  T
Q  240 gcttctttgatccttttg 257  Q
    ||  ||||| ||||||||    
T  3227208 gcaactttggtccttttg 3227225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 17782655 - 17782562
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 231  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    |||||||||||||    
T  17782655 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagattta 17782562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 46482599 - 46482723
Alignment:
Q  142 ctaaagtgcattttccccc-cttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 240  Q
    |||||||||||||| | || | ||| ||||||||| ||  || |||| |||| || ||| |||||||| ||||||| |||||||||||||| | ||||||    
T  46482599 ctaaagtgcatttttctcctcctaattttcaaaaatttgtaaatttgaccccctatgtacaaaaactataattttaatcccctaagatttatctcctttg 46482698  T
Q  241 cttctttgatccttttggtcaattt 265  Q
    | | ||| |||||||||||||||||    
T  46482699 cattttttatccttttggtcaattt 46482723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 11662649 - 11662550
Alignment:
Q  143 taaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| || |  || ||| |||||||| |||||| | |||| |||| ||| |||||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagcccctttgc 11662550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 14998048 - 14998106
Alignment:
Q  207 tacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||||| | ||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  14998048 tacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattt 14998106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 769413 - 769531
Alignment:
Q  140 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||| || ||| ||| |||||||||||| |||||||| |  | |||||| ||||| || |||||| |  |||| ||| ||||||| ||    
T  769413 ggctaaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggctcccttagaattaacccatt 769512  T
Q  239 tgcttctttgatccttttg 257  Q
    ||| |||||||||||||||    
T  769513 tgcatctttgatccttttg 769531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 34174084 - 34174010
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatt 213  Q
    ||||||||||||| ||| ||||| || ||||||||| ||| ||||||||||||| ||||||  ||||| ||||||    
T  34174084 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 48935004 - 48934902
Alignment:
Q  140 ggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||||||| || ||| ||||||||||||||||  ||||||| |||  |||||| |||||||| ||||||  ||||| |||| ||| ||| ||    
T  48935004 ggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttgatcccccaagaattagcccatt 48934905  T
Q  239 tgc 241  Q
    |||    
T  48934904 tgc 48934902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 20163658 - 20163585
Alignment:
Q  139 aggctaaagtgcattt-tccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaa 211  Q
    ||||||||||||| || ||| ||| |||||||||||||||| |||||||||| || || ||| |||||||||||    
T  20163658 aggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 47524538 - 47524599
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatt 213  Q
    |||||||||  |||||||||||||||| ||||||||||||| ||||||  ||||| ||||||    
T  47524538 ttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 21508504 - 21508453
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccc 191  Q
    ||||||||||||||||| |||| |||||||||||||| || ||||||||||||    
T  21508504 aggctaaagtgcatttttcccc-ttaactttcaaaaagtttcaattttggccc 21508453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 770791 - 770736
Alignment:
Q  210 aattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    |||||| | ||||||| ||||| ||||||||| ||||||||| |||||||||||||    
T  770791 aattttggccccctaaaatttagcccctttgcatctttgatcattttggtcaattt 770736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 34351496 - 34351584
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 231  Q
    |||||||||||||||    |||| | |||||||||||||| |||||||||| |   ||||||| ||||||||||||||  ||| |||||||||    
T  34351496 aggctaaagtgcatt----ccccctgactttcaaaaacttgcaattttggctctccaagtatagaaactacaattttaaccccttaagattta 34351584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 128699 - 128585
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||||||| || ||||||||||||| || |||||||| |||| ||||||  ||||| |||||||    ||||||||||| | |||| ||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagccccattgc 128600  T
Q  242 ttctttgatcctttt 256  Q
      |||||| ||||||    
T  128599 aactttgaccctttt 128585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 597382 - 597309
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||| ||||||||| ||||  ||||||||||||||||  ||||||| | | ||||||| |||||||||||||||    
T  597382 aggctaatgtgcatttttcccc--taactttcaaaaacttgaaattttgacgc-ataagtacaaaaactacaatttt 597309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 34352888 - 34352792
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacc 234  Q
    ||||||||||||| |||  | ||| ||| |||||||||||| | ||||||| ||| |||||| | |||||| |||||| | || |||||||||||||    
T  34352888 aggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccctctaagatttaacc 34352792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 3409 - 3283
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||| ||| |||||||| |||||| ||||||||||||||| |||||    
T  3409 aggctaaagtgcacttttcccccctta-ctttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcccct 3311  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||||||||||| | ||||||    
T  3310 ttgcaactttgatcctttttgccaattt 3283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 7316396 - 7316269
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| |||  |||| |||||||| | ||| ||||||||| |||||    
T  7316396 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagcccct 7316297  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| ||| || ||||||||||||||||    
T  7316296 ttgcatctatggtccttttggtcaattt 7316269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 1829685 - 1829578
Alignment:
Q  158 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttg 257  Q
    |||| ||||||| |||||||| |||||||| |||| |||||||||||||||||||||| | ||||||||||||| ||||||||| |||||| || |||||    
T  1829685 ccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctttgcatctttggtcattttg 1829586  T
Q  258 gtcaattt 265  Q
    ||||||||    
T  1829585 gtcaattt 1829578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 7314880 - 7315005
Alignment:
Q  140 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||| ||||| ||||||||   ||||||||||||| ||||||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtatcaaaacaacaattttgaccccctaagatttagcccctt 7314978  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| || |||||||||||||    
T  7314979 tgcatctttggtcattttggtcaattt 7315005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 10784591 - 10784710
Alignment:
Q  139 aggctaaagtgca-ttttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 236  Q
    ||||||||||||| ||||||| ||||||||||| |||||||| |||||||  |||| |||||||||||||||||||||| | |||| |||||||| ||||    
T  10784591 aggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccc 10784690  T
Q  237 tttgcttctttgatcctttt 256  Q
    |||||  |||||||||||||    
T  10784691 tttgcaactttgatcctttt 10784710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 16704599 - 16704472
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||  |||  ||||||||| || ||    
T  16704599 aggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagcctct 16704500  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  || |||||||||| ||||||||    
T  16704499 ttgcaactatgatcctttttgtcaattt 16704472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 14822359 - 14822452
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 231  Q
    |||||| |||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||| | |||||||||||||    
T  14822359 aggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagattta 14822452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 26575131 - 26575029
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 262  Q
    |||||||||||||||| |||||||  |||| |||||| ||||||||||||||| | ||||||||||||||| |||||||  ||||||||||||| | |||    
T  26575131 taactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgcaactttgatcctttttgccaa 26575032  T
Q  263 ttt 265  Q
    |||    
T  26575031 ttt 26575029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 27437827 - 27437954
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||| |||||||||||| ||||| || ||||||||||||| ||   |||||||||||||||||   ||||||||||||| | |||    
T  27437827 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcct 27437926  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||| ||||||||| ||||||    
T  27437927 ttgcaactttggtccttttggccaattt 27437954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 17496792 - 17496924
Alignment:
Q  139 aggctaaagtgcattttcccccct-----taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccc-taagatttaa 232  Q
    ||||||||||||||||| ||||||     |||||||||||||||| |||||||  |||  |||||| ||||||| ||||||| | |||| ||||||||||    
T  17496792 aggctaaagtgcatttttccccctccccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatttaa 17496891  T
Q  233 cccctttgcttctttgatccttttggtcaattt 265  Q
    || |||||| |||||| |||||||| |||||||    
T  17496892 cctctttgcatctttggtccttttgatcaattt 17496924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 6842385 - 6842258
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| ||| ||||||||| || ||||||||||||| || ||  |||||||||||||||||| || ||| |||||  |  |    
T  6842385 aggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaattttagttccttaaaatttagtctgt 6842286  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||||||||||||| ||||||    
T  6842285 ttgcatctttgatccttttggccaattt 6842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 8659264 - 8659383
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  8659264 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 8659363  T
Q  238 ttgcttctttgatccttttg 257  Q
    ||||  ||||| ||||||||    
T  8659364 ttgcaactttggtccttttg 8659383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 26574618 - 26574744
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||| ||| |||||||||||||||| ||||||||  ||  |||||| ||||||||| |||||  |||| ||||||||| |||||    
T  26574618 aggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactac-attttgatcccttaagatttagcccct 26574716  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  |||||||| |||| ||||||||    
T  26574717 ttgcaactttgatcttttttgtcaattt 26574744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 6840193 - 6840310
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||| ||||||| |||||||| |||| ||||||||| || | ||||||||||| ||| || |||||||| ||||||   || ||||||||||| |||||    
T  6840193 aggctgaagtgcactttccccc-ttaagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttgaccctctaagatttaatccctt 6840291  T
Q  239 tgcttctttgatccttttg 257  Q
    ||| |||||||||||||||    
T  6840292 tgcatctttgatccttttg 6840310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 27322169 - 27322051
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    ||||||||||||| ||| ||||| || ||||||||| ||| ||||||||||||| ||||||  ||||| ||||||||   ||||||||| ||| ||||||    
T  27322169 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagcccctt 27322070  T
Q  239 tgcttctttgatccttttg 257  Q
    ||||| |||  ||||||||    
T  27322069 tgcttatttcgtccttttg 27322051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 26949263 - 26949178
Alignment:
Q  159 cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttcttt 247  Q
    ||||||||||||||||| || |||||||| |||  ||||||||||||||||||||||| ||  |||||||||||||||||||| |||||    
T  26949263 cccttaactttcaaaaa-ttgcaattttgcccc--taagtataaaaactacaattttaatcttctaagatttaacccctttgcatcttt 26949178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 10786000 - 10785897
Alignment:
Q  152 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 251  Q
    ||||||||||| |||||| ||||| || |||||||  |||| |||||| ||||||||||||||||  ||| ||||||||| |||||||||  ||||||||    
T  10786000 ttttcccccct-aacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgcaactttgatc 10785902  T
Q  252 ctttt 256  Q
    |||||    
T  10785901 ctttt 10785897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 16703570 - 16703684
Alignment:
Q  140 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    |||||||||||| ||| |||||| | ||||||||||||| ||||||||  || |||| || ||||||||||||||||| ||||||| ||||||||||||     
T  16703570 ggctaaagtgcacttttccccct-atctttcaaaaacttgcaattttgatcc-ataaatacaaaaactacaattttagccccctaaaatttaaccccttc 16703667  T
Q  240 gcttctttgatcctttt 256  Q
     |  |||||||||||||    
T  16703668 ccaactttgatcctttt 16703684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 5658759 - 5658882
Alignment:
Q  143 taaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||||||| |||||||||| ||| ||||| ||  |||||| |  || || ||| |||||||||||||||  |||| ||||||||| ||| |||||    
T  5658759 taaagtgcatttttccccccttaagttttaaaaagttataattttagttccctatgtacaaaaactacaattttgatcccttaagatttagcccatttgc 5658858  T
Q  242 ttctttgatccttttggtcaattt 265  Q
      ||||||||||||||||||||||    
T  5658859 aactttgatccttttggtcaattt 5658882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 8821872 - 8821991
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| | ||     
T  8821872 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagctcca 8821971  T
Q  238 ttgcttctttgatccttttg 257  Q
    ||||  ||||| ||||||||    
T  8821972 ttgcaactttggtccttttg 8821991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 14823678 - 14823584
Alignment:
Q  139 aggctaaagtgca--ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 231  Q
    |||||||||||||  |||| ||||||||| ||| |||||||| ||||||| ||||| |||||| | ||||||||||||| | |||||||||||||    
T  14823678 aggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagattta 14823584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 8660305 - 8660187
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||| | |||||||||||||||| |||||||| |||| ||||||  ||||| |||||||    ||||||||||||| | ||     
T  8660305 aggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacccc-taagtaccaaaaccacaatttagcccccctaagatttagctcca 8660207  T
Q  238 ttgcttctttgatccttttg 257  Q
    ||||  ||||||||||||||    
T  8660206 ttgcaactttgatccttttg 8660187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 8822894 - 8822776
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||||||| | ||||||||||||||||| |||||||| |||| ||||||  ||||| |||||||    ||||||||||||| |||  |    
T  8822894 ggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcccaat 8822795  T
Q  239 tgcttctttgatccttttg 257  Q
    |||  ||||| ||||||||    
T  8822794 tgcaactttggtccttttg 8822776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 3721611 - 3721730
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccc-taagatttaacccc 236  Q
    ||||||||||||| ||| |||||| |||||||||||||||| |||||||| |||| ||||||  ||||| | || ||||| |||| ||||||||| ||||    
T  3721611 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataa-tttagaccccttaagatttagcccc 3721709  T
Q  237 tttgcttctttgatccttttg 257  Q
     ||||  ||||| ||||||||    
T  3721710 attgcaactttggtccttttg 3721730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 12350823 - 12350898
Alignment:
Q  164 aactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 240  Q
    |||||| | |||||| |||||||| |||| || ||||||||||||||||||||  ||||||||||||| ||||||||    
T  12350823 aactttaataaacttgcaattttgacccc-tatgtataaaaactacaattttaaccccctaagatttagcccctttg 12350898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 12382811 - 12382695
Alignment:
Q  141 gctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    ||||||||||| ||| || ||| ||| ||| ||||| ||  ||||||| |||| ||||||| ||||||| ||||||  ||||| |||||||||||| |||    
T  12382811 gctaaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttgatccccaaagatttaaccctttt 12382712  T
Q  240 gcttctttgatcctttt 256  Q
    || |||||| |||||||    
T  12382711 gcatctttggtcctttt 12382695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 3333084 - 3333005
Alignment:
Q  182 attttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtca 261  Q
    ||||||||||| || ||| ||||||||||||||||  || |||| ||||| |||||||||  ||||||||||||| ||||    
T  3333084 attttggccccctatgtacaaaaactacaattttaaccctctaaaatttagcccctttgcaactttgatccttttagtca 3333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 34834677 - 34834562
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| ||||||| || |||||||||||||||| ||||||||  | | ||||||| ||||| |||||||    ||||||||||||| |||| ||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagccccattgc 34834578  T
Q  242 ttctttgatccttttg 257  Q
      ||||| ||||||||    
T  34834577 aactttggtccttttg 34834562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 3722609 - 3722533
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattt 214  Q
    ||||||||||||| ||||||| || |||||||||||||||| |||||||| |||  ||||||  ||||| |||||||    
T  3722609 aggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 27448015 - 27447962
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccc 191  Q
    ||||||||||||| |||||||||||||| ||| ||||| || ||||||||||||    
T  27448015 aggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggccc 27447962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 3333564 - 3333500
Alignment:
Q  201 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||||||||||||  || ||| |||||| |||||| ||  ||||||||||||||| ||||||    
T  3333564 aaaaactacaattttaaccctctatgatttagccccttcgcaactttgatccttttggccaattt 3333500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 26717183 - 26717127
Alignment:
Q  142 ctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataag 197  Q
    |||||||||| |||||||||||||| ||||| |||||| |||||||| |||| ||||    
T  26717183 ctaaagtgcacttttccccccttaagtttcagaaacttgcaattttgaccccttaag 26717127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 265
Target Start/End: Complemental strand, 61559 - 61434
Alignment:
Q  141 gctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    ||||||||||| |||||| ||||||| |||||||||||| ||||||| ||||| |||||| |||||||| |||||| | |||||| |||||| ||| |||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagccctttt 61460  T
Q  240 gcttctttgatccttttggtcaattt 265  Q
    || |||||| ||||||||||||||||    
T  61459 gcatctttggtccttttggtcaattt 61434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 60090 - 60216
Alignment:
Q  140 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||| || ||| ||||||| |||||||| |||||||| |||| || |||||||||||||||||||   |||||| |||||| ||||||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccctt 60189  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    ||| |||||| || |||||||||||||    
T  60190 tgcatctttggtctttttggtcaattt 60216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 233 - 350
Alignment:
Q  140 ggctaaagtgcattttcccc-ccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| ||||||| |||||||||||||||| || ||||||||| ||| || ||| |||||||| |||||| ||||||||||| ||| ||||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccctt 332  T
Q  239 tgcttctttgatcctttt 256  Q
    ||| | ||||||||||||    
T  333 tgcatatttgatcctttt 350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 1438 - 1565
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||| | ||| |||||| ||||||| |||||||| |||||||| |||| || |||||||||||| ||||||   ||||||||||||| ||| |    
T  1438 aggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccat 1537  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    |||| |||||| ||||||||||||||||    
T  1538 ttgcatctttggtccttttggtcaattt 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 17469 - 17572
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||| ||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||||| | |||| |||| ||| |||||    
T  17469 aggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccct 17568  T
Q  238 ttgc 241  Q
    ||||    
T  17569 ttgc 17572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 18877 - 18751
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||| ||| | ||||||| ||||| || ||||||||| ||| || ||| |||||||| |||||| | ||| ||| ||||| |||| |    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagccccat 18778  T
Q  239 tgcttctttgatccttttggtcaattt 265  Q
    |||  |||| ||| |||||||||||||    
T  18777 tgcaactttaatcattttggtcaattt 18751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 5540 - 5413
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| |||||||||| ||| |||||||||||| |||||||| |||| |||||| |||||||||||||||   ||| ||||||||| ||||     
T  5540 aggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagcccca 5441  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    || |   ||||||||||||||| |||||    
T  5440 ttacaaatttgatccttttggttaattt 5413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 4441 - 4539
Alignment:
Q  139 aggctaaagtgca--ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 236  Q
    |||||||||||||  ||||||||||| || |||||||||||| ||||||| ||||| |||||| ||||| ||||||||||  ||||||| ||||| ||||    
T  4441 aggctaaagtgcacattttcccccct-aattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccctaaaatttagcccc 4539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 49535 - 49408
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||||| |||||||||||| ||||| || ||||||||||||| ||   |||||||||||||||||   ||||||||||||| | |||    
T  49535 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcct 49436  T
Q  238 ttgcttctttgatccttttggtcaattt 265  Q
    ||||  ||||| ||||||||| ||||||    
T  49435 ttgcaactttggtccttttggccaattt 49408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 39343 - 39396
Alignment:
Q  139 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccc 191  Q
    ||||||||||||| |||||||||||||| ||| ||||| || ||||||||||||    
T  39343 aggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggccc 39396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 3699 - 3801
Alignment:
Q  163 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 262  Q
    |||||||||||||||| ||||||||||||| | |||| | |||||| |||||||||||||||||||||| || | ||||  |||| ||| ||||||||||    
T  3699 taactttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagccgcattgcaactttaatctttttggtcaa 3798  T
Q  263 ttt 265  Q
    |||    
T  3799 ttt 3801  T

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Target: scaffold0059; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 4829 - 4755
Alignment:
Q  141 gctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||||||| |||||| || ||||||| |||||| | ||||||||||||| ||| || | |||||||||||||    
T  4829 gctaaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaatttt 4755  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 49185 - 49109
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 215  Q
    ||||||| |||| |||||| ||||||||||| |||||||| ||||||||||| | ||||||| ||||||||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

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Target: scaffold0045; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 48334 - 48432
Alignment:
Q  164 aactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaat 263  Q
    |||| |||||||||| ||||||  | ||| || ||| |||||||| |||||| |||||||||||||||  |||||||| |||||| ||| ||||||||||    
T  48334 aactctcaaaaacttgcaattt--gacccctatgtacaaaaactataattttggtcccctaagatttattccctttgcatctttggtcc-tttggtcaat 48430  T

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Target: scaffold0586 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 257
Target Start/End: Original strand, 6346 - 6461
Alignment:
Q  143 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 241  Q
    ||||||||| |||||| ||||||| ||||||||| || | ||||| ||||| || ||| |||||||||||||||   ||||||||||||| ||  |||||    
T  6346 taaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgaccccctaagatttagcctttttgc 6445  T
Q  242 ttctttgatccttttg 257  Q
     |||||| ||||||||    
T  6446 atctttggtccttttg 6461  T

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Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 7517 - 7394
Alignment:
Q  139 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 237  Q
    ||||||||||||| ||  |||||| ||| ||| ||||| || | |||||| |||| || ||| | |||||||||||||   ||||||||||||| |||||    
T  7517 aggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttgaccccctaagatttagcccct 7418  T
Q  238 ttgcttctttgatccttttggtca 261  Q
    ||||  ||||||||||||| ||||    
T  7417 ttgcaactttgatccttttagtca 7394  T

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Target: scaffold0049; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 7957 - 7894
Alignment:
Q  202 aaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 265  Q
    ||||||| |||||||  |||||| |||||| |||||||||  ||||||||||||||| ||||||    
T  7957 aaaactagaattttaaccccctatgatttagcccctttgcaactttgatccttttggccaattt 7894  T

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Target: scaffold0186 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 23081 - 23181
Alignment:
Q  140 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    |||||||||||| ||| |||||| ||||||||||||||| |||||||| |||  ||||||  ||||| ||||| ||  ||||||||| |||| |||| ||    
T  23081 ggctaaagtgcacttttccccct-aactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctttagccccatt 23179  T
Q  240 gc 241  Q
    ||    
T  23180 gc 23181  T

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Target: scaffold0093 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 265
Target Start/End: Complemental strand, 2564 - 2440
Alignment:
Q  141 gctaaagtgcattttccccccttaactttcaaaaa-cttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    ||||||||||| ||| |||||| |||||||||||| ||| |||||||| |||| |||||| |||||| || ||||| | |||||| |||||| |  | ||    
T  2564 gctaaagtgcacttttccccct-aactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacatt 2466  T
Q  240 gcttctttgatccttttggtcaattt 265  Q
    ||   ||| |||||||||||||||||    
T  2465 gcaaatttcatccttttggtcaattt 2440  T

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Target: scaffold0093; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 265
Target Start/End: Complemental strand, 7187 - 7063
Alignment:
Q  141 gctaaagtgcattttccccccttaactttcaaaaa-cttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 239  Q
    ||||||||||| ||| |||||| |||||||||||| ||| |||||||| |||| |||||| |||||| || ||||| | |||||| |||||| |  | ||    
T  7187 gctaaagtgcacttttccccct-aactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacatt 7089  T
Q  240 gcttctttgatccttttggtcaattt 265  Q
    ||   ||| |||||||||||||||||    
T  7088 gcaaatttcatccttttggtcaattt 7063  T

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Target: scaffold0369 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 13192 - 13285
Alignment:
Q  139 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaac 233  Q
    ||||||||||||| ||| |||||| |||||| ||||| ||   |||||| || | || |||  |||||||||||||| |||||||||||||||||    
T  13192 aggctaaagtgcacttttccccct-aactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttttgtcccctaagatttaac 13285  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 220 - 118
Alignment:
Q  140 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 238  Q
    |||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| |||| |    
T  220 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccat 121  T
Q  239 tgc 241  Q
    |||    
T  120 tgc 118  T

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