View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10865A_low_275 (Length: 247)
Name: NF10865A_low_275
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_low_275 |
 | |
|
| [»] scaffold0228 (3 HSPs) |
| | |
|
| [»] scaffold0111 (2 HSPs) |
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| [»] scaffold0018 (1 HSPs) |
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| [»] scaffold0039 (1 HSPs) |
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| [»] scaffold0964 (1 HSPs) |
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| [»] scaffold0050 (1 HSPs) |
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| [»] scaffold0007 (1 HSPs) |
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| [»] scaffold0014 (1 HSPs) |
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| [»] scaffold0196 (1 HSPs) |
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| [»] scaffold0193 (1 HSPs) |
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| [»] scaffold0186 (1 HSPs) |
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| [»] scaffold0004 (1 HSPs) |
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| [»] scaffold0112 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0772 (1 HSPs) |
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| [»] scaffold0205 (1 HSPs) |
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| [»] scaffold0001 (2 HSPs) |
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| [»] scaffold0058 (1 HSPs) |
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| [»] scaffold0305 (1 HSPs) |
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| [»] scaffold0183 (1 HSPs) |
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| [»] scaffold0020 (1 HSPs) |
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| [»] scaffold0013 (1 HSPs) |
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| [»] scaffold0331 (1 HSPs) |
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| [»] scaffold0233 (1 HSPs) |
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| [»] scaffold0133 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 25)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 19659226 - 19659142
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
19659226 |
atacacacatagacaattaatcacacaaaagcacatataaacacacataataaataattaaaataattctagcgaaaaacgggct |
19659142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 5348138 - 5348216
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
||||||||| ||||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5348138 |
atacacacatagacaattaatcatatacaagtacatataaacacacataataaataattaaaataattctagcgaaaaa |
5348216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 19631372 - 19631290
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| |||| |||| ||||||||| |
|
|
| T |
19631372 |
atacacacagagacaattaatcacacacaagcacatataaacacacataataaataaataaaacaattctagcaaaaaacggg |
19631290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 4657452 - 4657509
Alignment:
| Q |
23 |
agacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt |
80 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4657452 |
agacaattaatcacatacaagcacatataaacacacataataaataattaaaataatt |
4657509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 11832354 - 11832277
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||| | |||||| |||||||||| ||||| ||||||||| |||||| || |||||||||||||| ||||||||| |
|
|
| T |
11832354 |
atacacatagagacaaataatcacatacaagcacatataaacatacataaaaattaattaaaataattctagcgaaaa |
11832277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 12252161 - 12252084
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||| | |||||| ||||| |||| ||||| |||| |||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
12252161 |
atacacatagagacaaataatcgcatacaagcacatatgaacacacataataattaattaaaataattctagcgaaaa |
12252084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 15044641 - 15044580
Alignment:
| Q |
30 |
taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
|||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
15044641 |
taatcacatacgagcacatataaacacatataataaataattaaaataattatagcaaaaaa |
15044580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 25660965 - 25660880
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| |||||||||||||||| |
|
|
| T |
25660965 |
atacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct |
25660880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 25667370 - 25667285
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| |||||||||||||||| |
|
|
| T |
25667370 |
atacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct |
25667285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 25673775 - 25673690
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| |||||||||||||||| |
|
|
| T |
25673775 |
atacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct |
25673690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 11829214 - 11829296
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| ||| || |||||||||| ||| ||||||||||||||||||||| |||| ||| ||| | ||||||||| |||| |
|
|
| T |
11829214 |
atacacacagagataaataatcacatacaagaatatataaacacacataataattaataaaagtaaatctagcgaaaatcggg |
11829296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 25680200 - 25680115
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||| ||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| |||||||||||||||| |
|
|
| T |
25680200 |
atacatacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct |
25680115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 25688504 - 25688419
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||| ||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| |||||||||||||||| |
|
|
| T |
25688504 |
atacatacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct |
25688419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 30104331 - 30104254
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||||||| ||| |||||||||| || || ||||||||||||||||| | |||||||||||||| |||| |||| |
|
|
| T |
30104331 |
atacacacaaaaacagataatcacatacaaacacatataaacacacataatcattaattaaaataattctagcaaaaa |
30104254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 16218326 - 16218278
Alignment:
| Q |
47 |
atataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
16218326 |
atatcaacacacataataaataattaaaatatttctagcgaaaaacggg |
16218278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 10935225 - 10935307
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
|||||||||||| ||| |||||||| | || || |||| ||||||| |||||| |||||||||||| | |||| ||||||||| |
|
|
| T |
10935225 |
atacacacaaaggcaaataatcacacataaacacatattaacacacttaataattaattaaaataaatctagcaaaaaacggg |
10935307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 7770075 - 7770018
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataat |
70 |
Q |
| |
|
|||||| || ||||||| ||||||||| ||||| ||| |||||||||||||||||||| |
|
|
| T |
7770075 |
atacacgcagagacaataaatcacatacaagcacatacaaacacacataataaataat |
7770018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 15540756 - 15540797
Alignment:
| Q |
51 |
aaacacacataataaataattaaaataattatagcgaaaaac |
92 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
15540756 |
aaacacacataataaataattaaaataattttagtgaaaaac |
15540797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 4161665 - 4161586
Alignment:
| Q |
17 |
acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||| || |||||||||||||| ||||||||| ||||||| || | ||| ||||||||||| | ||||||||| |||||| |
|
|
| T |
4161665 |
acacagaggcaattaatcacataaaagcatataaaaacacatatta-aaacaattaaaataaatctagcgaaaatcgggct |
4161586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 13440903 - 13440947
Alignment:
| Q |
54 |
cacacataataaataattaaaataattatagcgaaaaacgggcta |
98 |
Q |
| |
|
|||| |||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
13440903 |
cacatataataaataattaaaatgattctagcgaaaaacgggcta |
13440947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 12695576 - 12695502
Alignment:
| Q |
16 |
cacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
|||||| ||||||| |||||||| ||||| |||| |||||| |||| | ||||||||||||||| |||||||||| |
|
|
| T |
12695576 |
cacacagagacaat-aatcacatgcaagcacatatcaacacatataagagataattaaaataattctagcgaaaaa |
12695502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 20421653 - 20421708
Alignment:
| Q |
23 |
agacaattaatcacatagaagcatatataaacacacataataaataattaaaataa |
78 |
Q |
| |
|
|||||||||||||| || ||||| ||||||||||| |||| || |||||||||||| |
|
|
| T |
20421653 |
agacaattaatcacgtacaagcacatataaacacatataaaaattaattaaaataa |
20421708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 17394186 - 17394268
Alignment:
| Q |
15 |
acacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||| || ||| |||||||| | |||||||||||||||| |||||||| ||| ||||||| | || |||||| |||||| |
|
|
| T |
17394186 |
acacacataggcaaataatcacacacaagcatatataaacacttataataaaaaataaaaataaatttaacgaaaatcgggct |
17394268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 6224522 - 6224458
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa |
78 |
Q |
| |
|
||||||||| || |||||||||||||| ||||||||| ||||||| || | ||| ||||||||||| |
|
|
| T |
6224522 |
atacacacagaggcaattaatcacataaaagcatataaaaacacatatta-aaacaattaaaataa |
6224458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 19431739 - 19431803
Alignment:
| Q |
30 |
taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
|||||||||| ||||| ||||||||||| | || || |||||||||||| | |||||||||||||| |
|
|
| T |
19431739 |
taatcacatacaagcacatataaacacataaaa-aattaattaaaataaatctagcgaaaaacggg |
19431803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 23475264 - 23475180
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
23475264 |
atacacacagagacaattaatcacatacaagcacatataatcacacataataaataattaaaataattctagcgaaaaatgggct |
23475180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 20408742 - 20408827
Alignment:
| Q |
10 |
aatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
|||||||||||| |||||| |||||||| | || | ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
20408742 |
aatatacacacatagacaaataatcacacacaaaaacatataaacacacataataagtaattaaaataattatagcgaaaaacggg |
20408827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 21721000 - 21721080
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg |
93 |
Q |
| |
|
||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||| | ||| |||||||||||| |
|
|
| T |
21721000 |
atacacacagagacaattaatcacatacgagcacatataaacacacataataaataattaaagtgattctagcgaaaaacg |
21721080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 18621302 - 18621226
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| ||| |||| |||||||||| |
|
|
| T |
18621302 |
atacacacagagacaattaatcacatacaagcacatataaacacacataataaataat--aaaaaattctagcgaaaaa |
18621226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 21424042 - 21424102
Alignment:
| Q |
30 |
taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
21424042 |
taatcacatacaagcacatataaacacacataataattaattaaaataattctagcgaaaa |
21424102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 22615874 - 22615950
Alignment:
| Q |
21 |
aaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||| || |||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
22615874 |
aaagataaataatcacatacaagcgcatataaacacacataataaataattaaaacatctatagcgaaaaacgggct |
22615950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 21981554 - 21981629
Alignment:
| Q |
5 |
cgaagaatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt |
80 |
Q |
| |
|
|||| |||||||||| |||||| |||||||||| ||||| |||| |||||||||||||| |||||||||||||| |
|
|
| T |
21981554 |
cgaataatatacacagtgagacaaataatcacatacaagcacatatgaacacacataataattaattaaaataatt |
21981629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 21403160 - 21403228
Alignment:
| Q |
27 |
aattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
21403160 |
aattaatcacatacaagaaccaataaacacacataataaataattaaaataattctagtaaaaaacggg |
21403228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 21682417 - 21682495
Alignment:
| Q |
17 |
acacaaagacaattaatcacatagaagcatatataaacacacataataaataatt-aaaataattatagcgaaaaacgg |
94 |
Q |
| |
|
|||||||||||||||||||| | || || |||||||| ||||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
21682417 |
acacaaagacaattaatcacgcataaacacatataaacgcacataagcaataattcaaaataattctagcgaaaaacgg |
21682495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 18830062 - 18829983
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac |
92 |
Q |
| |
|
||||||||| ||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18830062 |
atacacacagagacaattaattacatacaagcacatataaatacacataataaataattaaaataattatagcgaaaaac |
18829983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 25281802 - 25281877
Alignment:
| Q |
4 |
tcgaagaatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataat |
79 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
25281802 |
tcgaataaaatacacacaaagacaattaatcacatacaagcacatataaacacacataataaataattaaaataat |
25281877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 23539739 - 23539657
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| ||| || |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23539739 |
atacacacatagataaataatcacatacaagcgcatataaacacacataataaataattaaaataattatagcgaaaaacggg |
23539657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 23543193 - 23543268
Alignment:
| Q |
20 |
caaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
|||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
23543193 |
caaagacaattaatcatatataagcacatataaacacacataataaataattaaaataattctagcaaaaaacggg |
23543268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 24625620 - 24625705
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta |
98 |
Q |
| |
|
||||||||| |||||| |||||||||| ||||| ||||||||||| ||||||||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
24625620 |
atacacacagagacaaataatcacatacaagcacatataaacacatataataaataaataaaataattctagcgaaaatcgggcta |
24625705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 16090705 - 16090627
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16090705 |
atacacacaaagacaattaatcacacgcaagcgcatatagacacacataataaataattaaaataattctagcgaaaaa |
16090627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 14393046 - 14392971
Alignment:
| Q |
17 |
acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg |
93 |
Q |
| |
|
||||| |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| | |||||||||||| |
|
|
| T |
14393046 |
acacacagacaattaatcacatgcaagcata-ataaacacatataataaataattaaaataaatctagcgaaaaacg |
14392971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 20496234 - 20496153
Alignment:
| Q |
14 |
tacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
|||| ||| ||||||||||||| | | ||||| | ||||||||||||||||| |||||||||||||| ||||||||| |||| |
|
|
| T |
20496234 |
tacatacagagacaattaatcatacacaagcacaaataaacacacataataattaattaaaataattctagcgaaaatcggg |
20496153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 23241517 - 23241440
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||| ||||||||||||||||||| | ||||| || |||| ||||||||||||||| |||||||||| |||| |||| |
|
|
| T |
23241517 |
atacaaacaaagacaattaatcacacacaagcacatgtaaatacacataataaataaataaaataattttagccaaaa |
23241440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 15887060 - 15887123
Alignment:
| Q |
17 |
acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt |
80 |
Q |
| |
|
||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
15887060 |
acacagagacaattaatcacatacaagtgcatataaacacgcataataaataattaaaataatt |
15887123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 18829252 - 18829321
Alignment:
| Q |
21 |
aaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||| || ||| |||||||||||| |||||||| |||| | |||||||||||||||||| ||| ||||| |
|
|
| T |
18829252 |
aaagataaataaccacatagaagcacatataaacgcacacactaaataattaaaataattctagagaaaa |
18829321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 25264020 - 25264060
Alignment:
| Q |
55 |
acacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
25264020 |
acacataataaataattaaaataattctatcgaaaaacggg |
25264060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 15929673 - 15929719
Alignment:
| Q |
49 |
ataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||| | ||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
15929673 |
ataaacaaatataataaataaataaaataattttagcgaaaaacggg |
15929719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0228 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0228
Description:
Target: scaffold0228; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 6398 - 6316
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
6398 |
atacacacagagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcggg |
6316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0228; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 13980 - 13898
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
13980 |
atacacacagagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcggg |
13898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0228; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 23932 - 23850
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
23932 |
atacacacagagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcggg |
23850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 17170328 - 17170410
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
17170328 |
atacacacagagacaattaatcacatacaagcgcatataaacacacataataaataattaaaataattgtagagaaaaacggg |
17170410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 18223448 - 18223375
Alignment:
| Q |
17 |
acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||| | |||||||| |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
18223448 |
acacaaatataattaatcgcatacaagcacatataaacacacataataaataattaaaataattctagcgaaaa |
18223375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 24516767 - 24516844
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||| |||| |||| |
|
|
| T |
24516767 |
atacacacagagacaattaatcacatacaagcacatataaacgcacataataattaattaaaataattttagcaaaaa |
24516844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 19315778 - 19315702
Alignment:
| Q |
17 |
acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg |
93 |
Q |
| |
|
||||| |||||| |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
19315778 |
acacagagacaaataatcacatacaagcacatataaacacacataatgaataattaaaataattatattgaaaaacg |
19315702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 22827013 - 22826936
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||||| |||| | |||||||||| ||| | ||||| ||||||||||||| |||||||||||||| |||| |||| |
|
|
| T |
22827013 |
atacacacagagacgaataatcacatacaagaacatatagacacacataataattaattaaaataattctagcaaaaa |
22826936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 19858829 - 19858749
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg |
93 |
Q |
| |
|
||||||||| |||||| |||||||| | ||| |||||| ||||||||||||||||||| ||||||| || ||||||||| |
|
|
| T |
19858829 |
atacacacagagacaaataatcacacacaagagcatataaccacacataataaataattagaataattctaacgaaaaacg |
19858749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 22446785 - 22446869
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
|||| |||| |||||| ||||||||| | || ||||||||||||||||||| ||| |||||||||| ||||||||| |||||| |
|
|
| T |
22446785 |
atacgcacatagacaaacaatcacatacacacacatataaacacacataataattaaataaaataattctagcgaaaatcgggct |
22446869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 10176081 - 10176021
Alignment:
| Q |
30 |
taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac |
92 |
Q |
| |
|
|||||||||| || || ||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
10176081 |
taatcacatacaaacacatataaacaca--taataaataattaaaataattctagcgaaaaac |
10176021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 31480307 - 31480377
Alignment:
| Q |
25 |
acaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggc |
96 |
Q |
| |
|
|||| |||||| ||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||| |
|
|
| T |
31480307 |
acaaataatcatatacaagcacatataaacacacataat-gataattaaaataattctagcgaaaatcgggc |
31480377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 17364851 - 17364893
Alignment:
| Q |
49 |
ataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||| ||||| |
|
|
| T |
17364851 |
ataaacacatataataaataattaaaataattctagctaaaaa |
17364893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 22053278 - 22053212
Alignment:
| Q |
24 |
gacaattaatcacatagaagcatatataaacacacataataaa-taattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
||||||||||||||||| |||| |||||| |||| ||||||| ||||||||||| |||||||||||| |
|
|
| T |
22053278 |
gacaattaatcacataggagcacatataa--acacgtaataaagcaattaaaataaatatagcgaaaaa |
22053212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 25243109 - 25243028
Alignment:
| Q |
16 |
cacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
|||||||||| || ||| ||||| || || | ||||||||| |||||||||| ||||||||||| |||| |||||| |||| |
|
|
| T |
25243109 |
cacacaaagaaaaataagcacatgtaaacacacataaacacatataataaatagttaaaataattctagctaaaaacaggct |
25243028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 25307261 - 25307180
Alignment:
| Q |
16 |
cacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
|||||||||| || ||| ||||| || || | ||||||||| |||||||||| ||||||||||| |||| |||||| |||| |
|
|
| T |
25307261 |
cacacaaagaaaaataagcacatgtaaacacacataaacacatataataaatagttaaaataattctagctaaaaacaggct |
25307180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 26260485 - 26260408
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||||| || || |||||||| | ||||||||| | ||||||||||||| |||| ||||||| | ||||||||| |
|
|
| T |
26260485 |
atacacacagaggtaaataatcacacacaagcatataaatacacacataataattaataaaaataaatctagcgaaaa |
26260408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0111 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0111
Description:
Target: scaffold0111; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 25295 - 25377
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||| ||||| |||| |
|
|
| T |
25295 |
atacacacacagacaattaatcacatacaagcacatataaaaacacataataaataattaaaataattctagtgaaaatcggg |
25377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0111; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 29273 - 29225
Alignment:
| Q |
49 |
ataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
29273 |
ataaacacatataataaataattaaaataattatagcaaaaaacaggct |
29225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 61852 - 61930
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
||||||||| ||||||||||||||||| || || ||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
61852 |
atacacacagagacaattaatcacatataaacaaatatagacacacataataaataattaaaataattctagcgaaaaa |
61930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 16896797 - 16896879
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
16896797 |
atacacacagagacaattcatcacatacaagcacatataaacacacataataaataattaaaataattctaacaaaaaacggg |
16896879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 13310655 - 13310739
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta |
98 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||| |||||||| | ||||||||| ||||||| |
|
|
| T |
13310655 |
atacacacaaagacaattaattacatagaagcacacataaatacacataataaataa-taaaataaatctagcgaaaatcgggcta |
13310739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 14355783 - 14355860
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||||| || |||| ||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
14355783 |
atacacacagaggcaatcaatcacacacaagcacatataaacacacataataaataattaaaataattttagcgaaaa |
14355860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 13562551 - 13562477
Alignment:
| Q |
23 |
agacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||||||||| | |||| ||||||||||| |||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
13562551 |
agacaattaatcacacacaagcgaatataaacacatataataaatatttaaaataattttagcgaaaaacgggct |
13562477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 14565970 - 14565892
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
||||||||||||||||||||||||| | || | |||||||||||||||||||||||||||||||| | || ||||||| |
|
|
| T |
14565970 |
atacacacaaagacaattaatcacacataaaaacatataaacacacataataaataattaaaataaatctaacgaaaaa |
14565892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 18027909 - 18027827
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| ||| || |||||||| | ||||| |||||||||||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
18027909 |
atacacacagagataaataatcacacacaagcacatataaacacacataataaataattaaaataattctatcaaaaaacggg |
18027827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 19976674 - 19976592
Alignment:
| Q |
10 |
aatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac |
92 |
Q |
| |
|
||||||||||||||| ||| |||||||| | ||||| ||||||||||| ||||||||||| |||||||||| ||| ||||||| |
|
|
| T |
19976674 |
aatatacacacaaaggcaaataatcacacaaaagcacatataaacacatataataaataactaaaataattctagagaaaaac |
19976592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 19969109 - 19969028
Alignment:
| Q |
14 |
tacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
|||| |||||| ||||||||||| || ||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
19969109 |
tacatacaaaggcaattaatcacttacaagcacataaaaacacacat--taaataattaaaataattatagcgaaaaacaggct |
19969028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 18558146 - 18558223
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||||| |||||| ||| |||||| ||||| ||||||||| ||||||||| |||||||||||||| || |||||| |
|
|
| T |
18558146 |
atacacacatagacaaataaacacatacaagcacatataaacatacataataattaattaaaataattctaacgaaaa |
18558223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 14894554 - 14894608
Alignment:
| Q |
23 |
agacaattaatcacatagaagcatatataaacacacataataaataattaaaata |
77 |
Q |
| |
|
|||||| |||||| ||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
14894554 |
agacaaataatcatatacaagcacatataaacacacataataaataattaaaata |
14894608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 4177055 - 4176997
Alignment:
| Q |
16 |
cacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa |
75 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||| |
|
|
| T |
4177055 |
cacacaaagacaaataatcacatatgagcatatataaacacacataa-aaacaattaaaa |
4176997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 10975683 - 10975722
Alignment:
| Q |
41 |
aagcatatataaacacacataataaataattaaaataatt |
80 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10975683 |
aagcatatataaacacacataataattaattaaaataatt |
10975722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 14672252 - 14672334
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| || |||||||||||||| ||||| ||||||| ||| |||| || |||||||||||| | || |||||| |||| |
|
|
| T |
14672252 |
atacacacagaggcaattaatcacatacaagcacatataaatacatataaaaattaattaaaataaatctaacgaaaatcggg |
14672334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 15514717 - 15514654
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa |
78 |
Q |
| |
|
||||||||| || |||||||||||||| ||||||||||||| ||||||| || |||||||||||| |
|
|
| T |
15514717 |
atacacacagaggcaattaatcacatacaagcatatataaa--cacataaaaattaattaaaataa |
15514654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 5484191 - 5484119
Alignment:
| Q |
15 |
acacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcga |
87 |
Q |
| |
|
||||||| |||||| |||||||||| || || | ||||||| ||||||||||||||| ||||||| |||||| |
|
|
| T |
5484191 |
acacacagagacaactaatcacatacaaacacacataaacatgcataataaataattagaataattctagcga |
5484119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 9296635 - 9296693
Alignment:
| Q |
30 |
taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaa |
89 |
Q |
| |
|
|||||||||| ||||| ||||||| ||||||||||||||| |||||||| | |||||||| |
|
|
| T |
9296635 |
taatcacatacaagcacatataaatacacataataaataa-taaaataaatctagcgaaa |
9296693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 23301340 - 23301378
Alignment:
| Q |
59 |
ataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
23301340 |
ataataaataaataaaataattctagcgaaaaacgggct |
23301378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 19980953 - 19981006
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaa |
66 |
Q |
| |
|
||||||||| | |||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
19980953 |
atacacacatatgcaattaatcacacataagcatatacaaacacacataataaa |
19981006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 9521715 - 9521792
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac |
92 |
Q |
| |
|
|||||||||| ||||| |||||||||| || | ||||||||||| | |||||| | |||||||||| ||||||||||| |
|
|
| T |
9521715 |
atacacacaatgacaaataatcacatacaaactcatataaacaca--tgataaattaataaaataattctagcgaaaaac |
9521792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 17013124 - 17013080
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacaca |
57 |
Q |
| |
|
||||||||| || |||||||||||||| ||||| ||||||||||| |
|
|
| T |
17013124 |
atacacacagaggcaattaatcacataaaagcacatataaacaca |
17013080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 19176066 - 19176102
Alignment:
| Q |
24 |
gacaattaatcacatagaagcatatataaacacacat |
60 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
19176066 |
gacaattaatcacatacaagcataaataaacacacat |
19176102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 22460308 - 22460356
Alignment:
| Q |
44 |
catatataaacacacataataaataattaaaataattatagcgaaaaac |
92 |
Q |
| |
|
|||| ||||||||| ||||| ||||| |||||||||| ||||||||||| |
|
|
| T |
22460308 |
catagataaacacatataattaataaataaaataattctagcgaaaaac |
22460356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0039 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 8621 - 8705
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||| |||| | |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||| |||| |
|
|
| T |
8621 |
atacacacagagacgagtaatcacatacaagcacatataaacacacataataaataattaaaataattctagcaaaaaacaggct |
8705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 11773369 - 11773285
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||| |||||| || ||||| | ||||| |||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
11773369 |
atacacacagagacaaatagtcacacacaagcacatataaacacacataataaataattaaaataattttaacgaaaaacgggct |
11773285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 13761104 - 13761022
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| |||||| |||||||||| ||| | ||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
13761104 |
atacacacatagacaaataatcacatacaagtacatataaatacacataataaataattaaaataattccagcgaaaaacggg |
13761022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 3169646 - 3169557
Alignment:
| Q |
5 |
cgaagaatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg |
94 |
Q |
| |
|
||||||| ||||||||||||| || | ||||||| || | |||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
3169646 |
cgaagaaaatacacacaaagataaatgatcacatgcaacaacatataaacacacataataaatatttaaaataattctagcgaaaaacgg |
3169557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 18083286 - 18083354
Alignment:
| Q |
30 |
taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta |
98 |
Q |
| |
|
|||||||||| ||||| ||||||||||| |||||||||||||||||||||| | | ||||||||||||| |
|
|
| T |
18083286 |
taatcacatacaagcacatataaacacatataataaataattaaaataattctcgggaaaaacgggcta |
18083354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 16095582 - 16095664
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
|||||||||||||||| ||| ||| | || || |||||||||||||||| |||||||||||||||| |||| ||||||||| |
|
|
| T |
16095582 |
atacacacaaagacaactaagtacaaacaaacacatataaacacacataaataataattaaaataattctagctaaaaacggg |
16095664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 29740639 - 29740550
Alignment:
| Q |
4 |
tcgaagaatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg |
94 |
Q |
| |
|
||||| || ||||||||| |||||| |||||||||| || || |||||| ||||||||||| | ||||||||||||| || |||||||||| |
|
|
| T |
29740639 |
tcgaataaaatacacacatagacaaataatcacataaaa-cacatataagcacacataatagacaattaaaataattctaacgaaaaacgg |
29740550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 16197719 - 16197767
Alignment:
| Q |
47 |
atataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| || ||||||||||| |
|
|
| T |
16197719 |
atataaacacatataataaataattaaaataattctaacgaaaaacggg |
16197767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 17923285 - 17923370
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggcta |
98 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||| |||||||||||| | ||| |||||||| ||| | ||||||||| ||||||| |
|
|
| T |
17923285 |
atacacacatagacaattaatcacatacgagcataaataaacacacatta-aaacaattaaaattaaatctagcgaaaatcgggcta |
17923370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 19070666 - 19070750
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta |
98 |
Q |
| |
|
||||||||| |||||| ||||||||| |||||| |||||||||||||| ||| ||||||||||| | || |||||| ||||||| |
|
|
| T |
19070666 |
atacacacatagacaaacaatcacatacgagcataaataaacacacataa-aaacaattaaaataaatctaacgaaaatcgggcta |
19070750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 8326516 - 8326472
Alignment:
| Q |
51 |
aaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
8326516 |
aaacactcataataaataatgaaaataattctagcgaaaaacggg |
8326472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 5549 - 5630
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| || ||| ||||||||| |||| || ||||||||||||||||||||| |||||||| | ||||| ||| |||| |
|
|
| T |
5549 |
atacacacagaggcaaataatcacatgcaagcttaaataaacacacataataaataa-taaaataaatctagcgtaaatcggg |
5630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 4485524 - 4485573
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataa |
62 |
Q |
| |
|
||||||||| || |||||||||||||| ||||||||| ||||||| |||| |
|
|
| T |
4485524 |
atacacacagaggcaattaatcacataaaagcatataaaaacacatataa |
4485573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 13146672 - 13146717
Alignment:
| Q |
49 |
ataaacacacataataaataattaaaataattatagcgaaaaacgg |
94 |
Q |
| |
|
||||||||| |||||||||||||||||||||| || | |||||||| |
|
|
| T |
13146672 |
ataaacacatataataaataattaaaataattctatcaaaaaacgg |
13146717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 17160157 - 17160102
Alignment:
| Q |
41 |
aagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||| ||| |||||||||||| |||||| |||||||||| || ||||||||||||| |
|
|
| T |
17160157 |
aagcacatacaaacacacataa-aaataaataaaataattctaacgaaaaacgggct |
17160102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0964 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0964
Description:
Target: scaffold0964; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 2923 - 3008
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta |
98 |
Q |
| |
|
|||||||||||||||| |||||| ||| ||||| ||||||||| ||| |||||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
2923 |
atacacacaaagacaaataatcagatacaagcacatataaacatacaaaataaataattaaattaattctagtgaaaaacgggcta |
3008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 77996 - 78076
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg |
93 |
Q |
| |
|
||||||||| |||||| |||||||||| ||||| |||||| ||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
77996 |
atacacacacagacaaataatcacatacaagcacctataaatacacataataaataattaaaagaattctagcgaaaaacg |
78076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 20511080 - 20511148
Alignment:
| Q |
23 |
agacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
||||||||||||||||| || || ||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
20511080 |
agacaattaatcacatacaaacacatataaacatacataataaataattaaaataattctagcgaaaaa |
20511148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 18995999 - 18996079
Alignment:
| Q |
15 |
acacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||| |||||| |||||| ||| ||||| | ||||||||||||||||| |||||||||||| ||| ||||||| |||| |
|
|
| T |
18995999 |
acacacagagacaaataatcatatacaagcacaaataaacacacataataattaattaaaataactattgcgaaaatcggg |
18996079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 24282382 - 24282453
Alignment:
| Q |
23 |
agacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||||||| ||| ||||| |||||| |||| |||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
24282382 |
agacaattaatcatatacaagcacatataa-cacaaataataaataattaaaataattttagtgaaaaacggg |
24282453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 28774991 - 28775072
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| |||||| |||||| ||| || || |||||| ||||| ||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
28774991 |
atacacacacagacaaataatcatatacaaacacatataatcacacgtaataaataattaaaat-attctagcgaaaaacggg |
28775072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 19285331 - 19285397
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt |
80 |
Q |
| |
|
||||||||| ||||||||||||||| | || | |||||| ||||||||||||||||||||||||||| |
|
|
| T |
19285331 |
atacacacagagacaattaatcacacacaaacgcatataa-cacacataataaataattaaaataatt |
19285397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 19901748 - 19901698
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataat |
63 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| | ||||||||||||||||| |
|
|
| T |
19901748 |
atacacacaaagaaaattaatcacatacaagaacatataaacacacataat |
19901698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 24699346 - 24699272
Alignment:
| Q |
17 |
acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
|||||||| ||||||| |||| | || | ||||||||||| |||||||||||||||||||||| || ||||||| |
|
|
| T |
24699346 |
acacaaaggcaattaagcacacataaatacatataaacacatataataaataattaaaataattctatcgaaaaa |
24699272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 21654963 - 21655047
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||| | |||| || ||||| | |||| |||||| |||||||||||||||||||| |||||| |||| |||||| |||| |
|
|
| T |
21654963 |
atacacacagatacaaatagtcacacacaagcgcatataatcacacataataaataattaagataattttagcaaaaaacaggct |
21655047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 24689995 - 24689915
Alignment:
| Q |
17 |
acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
|||||||| ||||||| |||| | || | ||||| ||||| |||||||||||||||||||||| || ||||||| ||||| |
|
|
| T |
24689995 |
acacaaaggcaattaagcacacataaatacatatatacacatataataaataattaaaataattctatcgaaaaatgggct |
24689915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 21909460 - 21909410
Alignment:
| Q |
47 |
atataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| || | ||||| ||||| |
|
|
| T |
21909460 |
atataaacacatataataaataattaaaataattctatctaaaaatgggct |
21909410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 204159 - 204092
Alignment:
| Q |
30 |
taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
|||||||| | || ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
204159 |
taatcacacacaaacatatataaacacacataataaataattaaaataattctaacgaaaaacgggct |
204092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 16571918 - 16572000
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||| ||| ||||||||||||||||| || | ||||||| |||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
16571918 |
atacatacatagacaattaatcacatacgaggacatataaatacacataataaataattaaattaatcatagcgaaaaacggg |
16572000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 21982713 - 21982793
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg |
93 |
Q |
| |
|
||||||||||||| || |||||| ||| ||||| |||||| |||||||||||||||| |||||||||| || ||||||||| |
|
|
| T |
21982713 |
atacacacaaagataaataatcatatacaagcacatataagcacacataataaataaataaaataattctaacgaaaaacg |
21982793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 28801554 - 28801630
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||||| |||||| || ||| ||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
28801554 |
atacacacagagacaaata-tcatatacaagcacatataaacacacataataattaattaaaataattctagcgaaaa |
28801630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 9273387 - 9273466
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac |
92 |
Q |
| |
|
||||||||| ||||||||||||| | | || |||||| ||||| |||||||||| ||||||| ||||| |||| |||||| |
|
|
| T |
9273387 |
atacacacagagacaattaatcaaacataaacatatagaaacaaacataataaacaattaaattaattctagctaaaaac |
9273466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 11777004 - 11777046
Alignment:
| Q |
49 |
ataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
11777004 |
ataaacacacataataaatagttaaaataattctagcgaaaaa |
11777046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 15712174 - 15712258
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacaca--taataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
|||||||||||| |||||||||||| | ||||| |||||||||| | ||||||||| |||||||||| || ||||||||||| |
|
|
| T |
15712174 |
atacacacaaaggcaattaatcacacacaagcacttataaacacataataaataaataaataaaataattctaacgaaaaacggg |
15712258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 16684900 - 16684957
Alignment:
| Q |
41 |
aagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta |
98 |
Q |
| |
|
||||| ||||||||||| | || |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
16684900 |
aagcacatataaacacataaaacaaataaataaaataattctagcgaaaaacgggcta |
16684957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 9253420 - 9253495
Alignment:
| Q |
17 |
acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac |
92 |
Q |
| |
|
||||| ||||||||||||| | | || |||||||||||| ||||||||||| ||| || ||||| |||| |||||| |
|
|
| T |
9253420 |
acacagagacaattaatcatacataaacatatataaacaaacataataaatcatttaattaattctagctaaaaac |
9253495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 9567330 - 9567397
Alignment:
| Q |
23 |
agacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
|||||| |||||||||| | || |||||| |||||||||||| |||||||||||||| ||| ||||| |
|
|
| T |
9567330 |
agacaaataatcacatacagacacatataaccacacataataattaattaaaataattctagtgaaaa |
9567397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 9652751 - 9652827
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
||||||||| ||||||||| ||||||| ||||| |||||| |||||||| || |||||||||||| | || ||||||| |
|
|
| T |
9652751 |
atacacacagagacaattagtcacataaaagcacatataa--acacataaaaattaattaaaataaatctaacgaaaaa |
9652827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 12334051 - 12333994
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataat |
70 |
Q |
| |
|
||||||||| ||||||||||||||| | | || ||||||||||||||||||| |||| |
|
|
| T |
12334051 |
atacacacatagacaattaatcacaaacagacacatataaacacacataataattaat |
12333994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 23269315 - 23269250
Alignment:
| Q |
32 |
atcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
|||||| | ||||| ||||||||||||| | || |||||||||||| ||||||||||| |||||| |
|
|
| T |
23269315 |
atcacacacaagcacatataaacacacaataaaagtaattaaaataaatatagcgaaaatcgggct |
23269250 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 6942896 - 6942864
Alignment:
| Q |
41 |
aagcatatataaacacacataataaataattaa |
73 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |
|
|
| T |
6942896 |
aagcacatataaacacacataataaataattaa |
6942864 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 202283 - 202204
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg |
93 |
Q |
| |
|
||||||||| |||||| || ||||||| ||||| ||||||| |||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
202283 |
atacacacagagacaaata-tcacatacaagcacatataaatacacataataaataattaaaataattctatcgaaaaacg |
202204 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0196 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0196
Description:
Target: scaffold0196; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 17781 - 17701
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg |
94 |
Q |
| |
|
|||||||||||||||| |||||||| | ||| |||||| |||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17781 |
atacacacaaagacaaataatcacacacaagtgcatataa-cacatataataaataattaaaataattctagcgaaaaacgg |
17701 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0193 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0193
Description:
Target: scaffold0193; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 19660 - 19737
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
||||||||| |||||||| |||| || ||||| ||||||||||||||||||| |||||||||||||| ||| ||||| |
|
|
| T |
19660 |
atacacacagtgacaattattcacttacaagcagatataaacacacataataattaattaaaataattctagggaaaa |
19737 |
T |
|
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Target: scaffold0186 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0186
Description:
Target: scaffold0186; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 19821 - 19897
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaa |
89 |
Q |
| |
|
||||||||| |||||||||||||| | || || ||||||||||| |||||||||||||||||||||| || ||||| |
|
|
| T |
19821 |
atacacacatggacaattaatcacacataaacacatataaacacatataataaataattaaaataattctaacgaaa |
19897 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 370771 - 370687
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||||||| |||||||||||||| | || || |||||||||| |||||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
370771 |
atacacacagggacaattaatcacacataaacacgtataaacacatataataaacaattaaaataattctagcgaaaaatgggct |
370687 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0112
Description:
Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 13966 - 14031
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa |
78 |
Q |
| |
|
||||||||| || |||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |
|
|
| T |
13966 |
atacacacagaggcaattaatcacatagaagcacatataaacatatataataatgaattaaaataa |
14031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 42423 - 42367
Alignment:
| Q |
41 |
aagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct |
97 |
Q |
| |
|
||||| ||| || |||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
42423 |
aagcacatacaaccacatataataaataattaaaataattctagcgaaaaacgggct |
42367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0772 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0772
Description:
Target: scaffold0772; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 2188 - 2111
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| ||||||||| | |||| ||||||| ||||||| | || ||||||| |
|
|
| T |
2188 |
atacacacagagacaattaatcacatataagcacatataaacatatataa-aaataataaaaataaatgtaacgaaaaa |
2111 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0205 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0205
Description:
Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 8755 - 8817
Alignment:
| Q |
28 |
attaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa |
90 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||| ||| ||||||| | ||||||||| |
|
|
| T |
8755 |
attaatcacatacaagcataaataaacacacataataacaaataaaaataaatctagcgaaaa |
8817 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 151271 - 151223
Alignment:
| Q |
47 |
atataaacacacataataaataattaaaataattatagcgaaaaacggg |
95 |
Q |
| |
|
||||||||| |||||| || ||||||||||||||||||| ||||||||| |
|
|
| T |
151271 |
atataaacatacataaaaattaattaaaataattatagcaaaaaacggg |
151223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 155616 - 155658
Alignment:
| Q |
49 |
ataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
155616 |
ataaacacgtataataaataattaaaataattctagcgaaaaa |
155658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 73540 - 73628
Alignment:
| Q |
4 |
tcgaagaatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg |
94 |
Q |
| |
|
||||| || ||||||||| | |||| |||| ||| | ||||| ||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
73540 |
tcgaataaaatacacacagaaacaaataatgacacacaagcacatataaacacaca--ataaatatataaaataattctagcgaaaaacgg |
73628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0305 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0305
Description:
Target: scaffold0305; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 10302 - 10348
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacaca |
59 |
Q |
| |
|
||||||||| ||||||||||||||| | ||||| ||||||||||||| |
|
|
| T |
10302 |
atacacacatagacaattaatcacagacaagcacatataaacacaca |
10348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0183
Description:
Target: scaffold0183; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 11825 - 11886
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa |
75 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||| ||||||||||| || | |||||||||||| |
|
|
| T |
11825 |
atacacacaaaggcaattaatcacatttaagcagatataaacacatatta-aaataattaaaa |
11886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 109106 - 109148
Alignment:
| Q |
47 |
atataaacacacataataaataattaaaataattatagcgaaa |
89 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
109106 |
atataaacacatataataattaattaaaataattctagcgaaa |
109148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 6524 - 6439
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataatt-aaaataattatagcgaaaaacgggcta |
98 |
Q |
| |
|
||||||||| || |||||||||||||| |||||| | |||||||||||| ||| |||| ||||||| | ||||||||| ||||||| |
|
|
| T |
6524 |
atacacacataggcaattaatcacatacgagcataaacaaacacacataa-aaacaattaaaaataaatctagcgaaaatcgggcta |
6439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0331 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0331
Description:
Target: scaffold0331; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 5249 - 5200
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacacacataa |
62 |
Q |
| |
|
||||||||| || |||||||||||| | ||||| |||||||||||||||| |
|
|
| T |
5249 |
atacacacagaggcaattaatcacaaacaagcacatataaacacacataa |
5200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0233 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0233
Description:
Target: scaffold0233; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 16449 - 16493
Alignment:
| Q |
47 |
atataaacacacataataaataattaaaataattatagcgaaaaa |
91 |
Q |
| |
|
|||||||||||||||||||||| ||||||| || |||||||||| |
|
|
| T |
16449 |
atataaacacacataataaatatctaaaatagttctagcgaaaaa |
16493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 26108 - 26152
Alignment:
| Q |
13 |
atacacacaaagacaattaatcacatagaagcatatataaacaca |
57 |
Q |
| |
|
||||||||| || |||||||||||||| ||||| ||||||||||| |
|
|
| T |
26108 |
atacacacagaggcaattaatcacataaaagcacatataaacaca |
26152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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