View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10865A_low_285 (Length: 246)
Name: NF10865A_low_285
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_low_285 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 17 - 226
Target Start/End: Original strand, 4806700 - 4806909
Alignment:
| Q |
17 |
acatcatattatggagactaaagcataggaatatggaaacaccaaacagttaaaaatgataataagtgcctgacaaatgataatacctgaagcaaaacac |
116 |
Q |
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| T |
4806700 |
acatcatattatggagactaaagcataggaatatggaaacaccaaacagttaaaaatgataataagtgcctgacaaatgataatacctgaagcaaaacac |
4806799 |
T |
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| Q |
117 |
caaatgattgaggttttgtcaattgcaaacacttcaagaatcccacccacaactttgggtatttccatacctacaacaactcatttagtcatgcatatgt |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4806800 |
caaatgattgaggttttgtcaattgcaaacacttcaagaatcctacccacaactttgggtatttccatacctacaacaactcatttagtcatgcatatgt |
4806899 |
T |
|
| Q |
217 |
acactgaaca |
226 |
Q |
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|||||||||| |
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| T |
4806900 |
acactgaaca |
4806909 |
T |
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