View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10865A_low_294 (Length: 244)

Name: NF10865A_low_294
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10865A_low_294
NF10865A_low_294
[»] chr6 (26 HSPs)
chr6 (1-164)||(17705259-17705419)
chr6 (1-159)||(28675259-28675418)
chr6 (1-159)||(17175816-17175975)
chr6 (58-159)||(32702375-32702475)
chr6 (58-161)||(2309216-2309318)
chr6 (1-159)||(33696807-33696967)
chr6 (58-159)||(29693615-29693716)
chr6 (58-159)||(23290876-23290976)
chr6 (1-161)||(33695119-33695281)
chr6 (1-160)||(18365368-18365527)
chr6 (1-160)||(18370632-18370791)
chr6 (68-157)||(11548386-11548474)
chr6 (96-158)||(34238883-34238944)
chr6 (1-131)||(18889466-18889597)
chr6 (1-144)||(6031550-6031695)
chr6 (1-49)||(25987041-25987089)
chr6 (1-89)||(9752110-9752199)
chr6 (105-161)||(2121002-2121058)
chr6 (96-155)||(8515727-8515786)
chr6 (96-155)||(17176023-17176082)
chr6 (96-155)||(17705467-17705526)
chr6 (96-155)||(33695329-33695388)
chr6 (96-155)||(33696700-33696759)
chr6 (105-155)||(28675152-28675202)
chr6 (109-161)||(582520-582572)
chr6 (1-49)||(29693549-29693597)
[»] chr3 (36 HSPs)
chr3 (1-192)||(42297975-42298156)
chr3 (58-165)||(47738281-47738388)
chr3 (17-159)||(36864827-36864969)
chr3 (1-159)||(3456175-3456334)
chr3 (58-144)||(33839705-33839791)
chr3 (61-159)||(40328004-40328102)
chr3 (2-161)||(19650693-19650852)
chr3 (1-164)||(22426135-22426298)
chr3 (58-161)||(30385570-30385672)
chr3 (58-157)||(33145882-33145980)
chr3 (1-164)||(33113904-33114069)
chr3 (58-161)||(26612916-26613019)
chr3 (1-159)||(3137209-3137368)
chr3 (1-159)||(3574321-3574480)
chr3 (68-159)||(8361834-8361924)
chr3 (59-162)||(24343720-24343823)
chr3 (58-159)||(34482683-34482783)
chr3 (58-159)||(37216848-37216948)
chr3 (58-158)||(8320378-8320477)
chr3 (68-159)||(9796824-9796914)
chr3 (58-157)||(42921295-42921394)
chr3 (58-160)||(3089589-3089690)
chr3 (66-159)||(6042055-6042147)
chr3 (58-161)||(2754889-2754991)
chr3 (58-160)||(37522223-37522324)
chr3 (66-159)||(48161084-48161176)
chr3 (68-159)||(41224414-41224504)
chr3 (61-145)||(41883030-41883114)
chr3 (96-155)||(6041888-6041947)
chr3 (96-158)||(46919102-46919164)
chr3 (1-49)||(30385122-30385170)
chr3 (1-49)||(9796935-9796983)
chr3 (96-144)||(9797031-9797079)
chr3 (1-49)||(33839642-33839690)
chr3 (103-155)||(42297357-42297409)
chr3 (96-144)||(47738120-47738168)
[»] chr5 (28 HSPs)
chr5 (1-169)||(38899510-38899680)
chr5 (1-158)||(3362889-3363048)
chr5 (1-161)||(33584122-33584283)
chr5 (1-159)||(4892313-4892472)
chr5 (1-160)||(8145486-8145644)
chr5 (1-156)||(12850912-12851069)
chr5 (1-161)||(6043305-6043465)
chr5 (58-159)||(12614532-12614633)
chr5 (1-159)||(25398349-25398508)
chr5 (1-159)||(37321588-37321747)
chr5 (1-159)||(3521802-3521960)
chr5 (68-159)||(22912852-22912942)
chr5 (1-159)||(14138779-14138937)
chr5 (68-159)||(17545477-17545567)
chr5 (1-138)||(11360947-11361085)
chr5 (1-160)||(2477747-2477907)
chr5 (1-116)||(4433845-4433961)
chr5 (96-155)||(12614735-12614794)
chr5 (96-142)||(27482031-27482077)
chr5 (1-49)||(31640846-31640894)
chr5 (84-155)||(3362782-3362853)
chr5 (96-155)||(22913056-22913115)
chr5 (84-131)||(31640930-31640977)
chr5 (84-155)||(38899716-38899787)
chr5 (105-155)||(6043522-6043572)
chr5 (96-149)||(10458407-10458460)
chr5 (105-142)||(27481843-27481880)
chr5 (96-144)||(8145390-8145438)
[»] chr2 (25 HSPs)
chr2 (1-162)||(9293367-9293530)
chr2 (1-155)||(3989187-3989342)
chr2 (58-164)||(22592880-22592988)
chr2 (1-161)||(33380318-33380479)
chr2 (1-162)||(10661998-10662161)
chr2 (1-163)||(7475299-7475462)
chr2 (1-159)||(23267857-23268016)
chr2 (1-156)||(31174633-31174788)
chr2 (1-169)||(35160868-35161039)
chr2 (58-130)||(16767285-16767357)
chr2 (58-159)||(13355018-13355118)
chr2 (68-159)||(43331092-43331182)
chr2 (68-157)||(21393483-21393570)
chr2 (58-161)||(9723576-9723679)
chr2 (68-138)||(37335824-37335894)
chr2 (58-118)||(14941199-14941259)
chr2 (96-155)||(14941368-14941427)
chr2 (1-131)||(21936192-21936325)
chr2 (96-142)||(27847649-27847695)
chr2 (1-49)||(16767378-16767426)
chr2 (96-155)||(9293578-9293637)
chr2 (96-155)||(9723409-9723468)
chr2 (68-119)||(34320991-34321042)
chr2 (84-144)||(13354861-13354921)
chr2 (119-159)||(27847791-27847831)
[»] scaffold0085 (2 HSPs)
scaffold0085 (1-163)||(47961-48123)
scaffold0085 (96-144)||(47865-47913)
[»] chr4 (43 HSPs)
chr4 (1-157)||(17655541-17655699)
chr4 (1-159)||(53123142-53123301)
chr4 (1-159)||(21802115-21802276)
chr4 (1-161)||(44893537-44893698)
chr4 (1-159)||(44893008-44893167)
chr4 (1-157)||(9088981-9089138)
chr4 (1-163)||(36073461-36073623)
chr4 (1-157)||(24128350-24128507)
chr4 (60-159)||(42671840-42671939)
chr4 (61-159)||(11314046-11314144)
chr4 (1-131)||(30563320-30563452)
chr4 (1-159)||(36073058-36073221)
chr4 (58-159)||(37219801-37219902)
chr4 (1-159)||(46441955-46442114)
chr4 (1-159)||(50156374-50156532)
chr4 (1-159)||(4751557-4751717)
chr4 (1-159)||(22199372-22199529)
chr4 (1-164)||(47290177-47290341)
chr4 (1-159)||(2624948-2625107)
chr4 (1-159)||(31078614-31078773)
chr4 (1-137)||(37934758-37934895)
chr4 (68-159)||(10442582-10442672)
chr4 (1-159)||(7744907-7745066)
chr4 (105-161)||(25063367-25063423)
chr4 (63-158)||(44744607-44744698)
chr4 (68-157)||(24392854-24392942)
chr4 (58-159)||(33530479-33530579)
chr4 (58-159)||(49387682-49387782)
chr4 (58-144)||(23964274-23964359)
chr4 (66-163)||(36073252-36073349)
chr4 (96-155)||(33530690-33530749)
chr4 (84-155)||(36072951-36073022)
chr4 (96-144)||(36073745-36073793)
chr4 (84-155)||(4751450-4751521)
chr4 (1-48)||(10442696-10442743)
chr4 (96-155)||(10442791-10442850)
chr4 (96-155)||(22199265-22199324)
chr4 (84-155)||(24128243-24128314)
chr4 (96-155)||(24392671-24392730)
chr4 (96-155)||(31078821-31078880)
chr4 (1-48)||(36073650-36073697)
chr4 (96-155)||(49387890-49387949)
chr4 (118-162)||(53998976-53999020)
[»] scaffold0228 (6 HSPs)
scaffold0228 (1-164)||(16095-16259)
scaffold0228 (1-164)||(26047-26211)
scaffold0228 (1-49)||(8513-8561)
scaffold0228 (96-144)||(8417-8465)
scaffold0228 (96-144)||(15999-16047)
scaffold0228 (96-144)||(25951-25999)
[»] chr8 (45 HSPs)
chr8 (1-157)||(34665493-34665649)
chr8 (1-157)||(20091598-20091755)
chr8 (1-159)||(37985851-37986009)
chr8 (3-157)||(38017047-38017201)
chr8 (59-157)||(37132477-37132575)
chr8 (1-159)||(6108028-6108187)
chr8 (1-162)||(42754834-42754996)
chr8 (1-161)||(17841643-17841804)
chr8 (58-161)||(30055686-30055788)
chr8 (1-162)||(25581031-25581193)
chr8 (58-164)||(10044518-10044623)
chr8 (1-159)||(26041908-26042067)
chr8 (1-159)||(40779924-40780083)
chr8 (1-159)||(32064856-32065016)
chr8 (58-131)||(41819590-41819663)
chr8 (58-158)||(14129029-14129128)
chr8 (70-166)||(31347564-31347659)
chr8 (1-159)||(1645759-1645919)
chr8 (58-157)||(24211169-24211267)
chr8 (1-160)||(3596835-3596995)
chr8 (66-159)||(1503638-1503730)
chr8 (58-159)||(15187730-15187830)
chr8 (78-159)||(30834850-30834931)
chr8 (1-144)||(32393969-32394111)
chr8 (68-159)||(7022159-7022249)
chr8 (62-156)||(3890412-3890506)
chr8 (58-144)||(39772612-39772697)
chr8 (68-159)||(7017653-7017743)
chr8 (1-144)||(35353152-35353296)
chr8 (108-144)||(1886633-1886669)
chr8 (1-120)||(8453945-8454065)
chr8 (1-118)||(27835288-27835407)
chr8 (58-161)||(24844653-24844756)
chr8 (1-49)||(24211459-24211507)
chr8 (1-49)||(41819684-41819732)
chr8 (96-155)||(8453838-8453897)
chr8 (84-155)||(15187564-15187635)
chr8 (96-155)||(26042118-26042177)
chr8 (96-155)||(27782119-27782178)
chr8 (96-155)||(32064749-32064808)
chr8 (96-155)||(34665386-34665445)
chr8 (102-156)||(24844866-24844920)
chr8 (1-49)||(7017771-7017819)
chr8 (96-144)||(38016986-38017034)
chr8 (96-144)||(42755044-42755092)
[»] chr1 (29 HSPs)
chr1 (14-161)||(25973533-25973679)
chr1 (1-159)||(44094809-44094967)
chr1 (1-160)||(37821628-37821788)
chr1 (1-164)||(20304920-20305085)
chr1 (1-164)||(51737616-51737780)
chr1 (1-159)||(19015515-19015674)
chr1 (1-159)||(36966503-36966662)
chr1 (1-159)||(41876237-41876396)
chr1 (1-158)||(40215099-40215257)
chr1 (1-159)||(25463787-25463946)
chr1 (68-161)||(32000059-32000151)
chr1 (68-159)||(33786426-33786516)
chr1 (1-164)||(6883598-6883762)
chr1 (58-159)||(3559787-3559887)
chr1 (58-159)||(18404618-18404718)
chr1 (68-157)||(40273888-40273976)
chr1 (61-167)||(44690808-44690914)
chr1 (97-158)||(52064373-52064434)
chr1 (96-160)||(19722893-19722956)
chr1 (1-160)||(9910085-9910247)
chr1 (96-156)||(33786637-33786696)
chr1 (84-155)||(32000257-32000328)
chr1 (111-159)||(27523050-27523098)
chr1 (1-49)||(44690935-44690983)
chr1 (96-155)||(16045800-16045859)
chr1 (96-155)||(40214992-40215051)
chr1 (96-155)||(40273706-40273765)
chr1 (96-144)||(27523257-27523305)
chr1 (1-49)||(40273813-40273861)
[»] chr7 (35 HSPs)
chr7 (1-157)||(4974532-4974689)
chr7 (1-165)||(30848680-30848845)
chr7 (1-159)||(45637823-45637981)
chr7 (1-161)||(24395083-24395243)
chr7 (58-144)||(29737314-29737400)
chr7 (61-157)||(20009895-20009991)
chr7 (1-159)||(3962090-3962248)
chr7 (58-159)||(35445567-35445667)
chr7 (96-165)||(36790265-36790334)
chr7 (1-159)||(48880722-48880881)
chr7 (68-159)||(15238564-15238654)
chr7 (1-159)||(15577642-15577804)
chr7 (58-159)||(34483008-34483108)
chr7 (1-159)||(42611922-42612081)
chr7 (58-159)||(42696253-42696354)
chr7 (68-158)||(37476876-37476965)
chr7 (58-159)||(15329444-15329544)
chr7 (58-162)||(35876414-35876517)
chr7 (74-159)||(25167651-25167735)
chr7 (68-159)||(18037157-18037247)
chr7 (1-46)||(35444669-35444714)
chr7 (96-155)||(15329277-15329336)
chr7 (96-155)||(48880929-48880988)
chr7 (1-49)||(25167756-25167804)
chr7 (1-49)||(34482946-34482993)
chr7 (96-155)||(3961983-3962042)
chr7 (96-155)||(4974737-4974796)
chr7 (96-155)||(15577852-15577911)
chr7 (96-155)||(42611815-42611874)
chr7 (96-155)||(45637716-45637775)
chr7 (1-46)||(15329384-15329429)
chr7 (95-155)||(24394976-24395036)
chr7 (87-155)||(36790459-36790527)
chr7 (1-49)||(37476986-37477034)
chr7 (87-155)||(37477073-37477141)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-162)||(4507-4669)
[»] scaffold0471 (2 HSPs)
scaffold0471 (1-157)||(12953-13110)
scaffold0471 (84-155)||(12846-12917)
[»] scaffold0178 (2 HSPs)
scaffold0178 (1-160)||(11732-11892)
scaffold0178 (96-155)||(11625-11684)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-160)||(41122-41281)


Alignment Details
Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 17705419 - 17705259
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnnatgaaaggttaataaatgagactgagatctaaggatagttatt 100  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||        ||||||||||||||||||||||||| ||||||||  | |||||    
T  17705419 aataaaatctcagtctggccggaaatcatgggatggtgggtgttatgtaatttttt-atgaaaggttaataaatgagactgaaatctaaggtga-ttatt 17705322  T
Q  101 gtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttt 164  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||| ||||    
T  17705321 gtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttttt 17705259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 28675259 - 28675418
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| | ||||||||          ||||||||||||||||||||||||| |||||||| |  |||    
T  28675259 aataaaatctcagcctggccggaaatcatggggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgatta 28675358  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  28675359 ttgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 28675418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 17175975 - 17175816
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  17175975 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 17175876  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||  ||||||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  17175875 ttgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 32702375 - 32702475
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | || ||||||||||||||||||||||||| |||||| |||||||||||||||| || |||||||||    
T  32702375 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 32702473  T
Q  158 cc 159  Q
    ||    
T  32702474 cc 32702475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 2309318 - 2309216
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||||||||||||| |||||||| |  |||||||| ||||||||||||||||||||||| ||||||||||  |||| || |||||||||    
T  2309318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatcgttgatatctagcatttt 2309220  T
Q  158 ccat 161  Q
    ||||    
T  2309219 ccat 2309216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 33696807 - 33696967
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||           ||||||| ||||||||||||||||| |||||| | |  ||    
T  33696807 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 33696906  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||| |||||||||||| |||||||||| |||||||||||||||| || |||||||||||    
T  33696907 attgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcattttcc 33696967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 29693615 - 29693716
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    |||||||| |||||||| ||||||| |||||||| |  ||||| || |||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  158 cc 159  Q
    ||    
T  29693715 cc 29693716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 23290976 - 23290876
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | || |||||||| ||| ||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttctt-ataaaatcatttttgatatctagcatttt 23290878  T
Q  158 cc 159  Q
    ||    
T  23290877 cc 23290876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 33695281 - 33695119
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||           ||||||| ||||||||||||||||| |||||| | |  ||    
T  33695281 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 33695182  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    |||||| ||| |||||||| ||| |||||| |||||||||||||||| || |||||||||||||    
T  33695181 attgtgacatatcattcttaaatatttctt-ataaaatcattcttgatatctagcattttccat 33695119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 18365527 - 18365368
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||  ||||||| |||||||||| | ||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  18365527 aataaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 18365428  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    ||||  |||||||||||| ||||||||| |||||||||||||||| || ||||||||||||    
T  18365427 tgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcca 18365368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 18370791 - 18370632
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||  ||||||| |||||||||| | ||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  18370791 aataaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 18370692  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    ||||  |||||||||||| ||||||||| |||||||||||||||| || ||||||||||||    
T  18370691 tgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcca 18370632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||| |||||||| |  |||||||| ||||||||||||||||| |||||||| ||||||||||||| || |||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgat-aaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 34238944 - 34238883
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttc 158  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  34238944 ttattgtgtcatgtcattcttgaatctt-cttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18889597 - 18889466
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||| || |||| |||||||||| ||||| || |||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  18889597 aataaaatctcagccttgccggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 18889498  T
Q  100 tgtgtcatgtcattcttgaatctttcttgata 131  Q
    |||| ||||||||||||||||| |||||||||    
T  18889497 tgtgccatgtcattcttgaatcattcttgata 18889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 6031695 - 6031550
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    ||||||||| ||| ||||||| |||||||||| ||||| ||||||||||           || |||| ||||||||||||||||| |||||| | |  ||    
T  6031695 aataaaatcccagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtgatt 6031596  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    |||||| |||||||||||| ||||||| || ||||||||||||||||    
T  6031595 attgtgccatgtcattcttaaatcttt-tttataaaatcattcttga 6031550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25987041 - 25987089
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  25987041 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9752199 - 9752110
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta-nnnnnnnnatgaaaggttaataaatgagactgagatctaa 89  Q
    ||||||||||||| ||||||| |||||||||| || || ||||||||||         ||||||||||||||||||||||||| ||||||    
T  9752199 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaa 9752110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 2121058 - 2121002
Alignment:
Q  105 catgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    |||||||||||||||||||| || ||||||||||| |||| || || ||||||||||    
T  2121058 catgtcattcttgaatctttttttataaaatcatttttgatatctaacattttccat 2121002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 8515727 - 8515786
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||| ||||| ||||||||||||| ||||||| || |||||||    
T  8515727 ttattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcatt 8515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 17176023 - 17176082
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||||||  ||| ||||||||||| ||||||| || |||||||    
T  17176023 ttattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 17705467 - 17705526
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||| ||  ||||||||||||||| ||||||| || |||||||    
T  17705467 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 33695329 - 33695388
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  33695329 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 33696759 - 33696700
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  33696759 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 28675202 - 28675152
Alignment:
Q  105 catgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  28675202 catgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 582572 - 582520
Alignment:
Q  109 tcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    |||||||| ||| |||||| |||||||||||||||| || || ||||||||||    
T  582572 tcattcttaaatttttcttaataaaatcattcttgatatctaacattttccat 582520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29693549 - 29693597
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||| ||||||| |||||||||| |||||  |||||||||    
T  29693549 aataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 29693597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 8e-42; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 42297975 - 42298156
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnnatgaaaggttaataaatgagactgagatctaaggatagttatt 100  Q
    ||||||||||||||||||||| |||||||||| ||||   |||||||||        ||||||||||||||||||||||||| |||||||| | ||||||    
T  42297975 aataaaatctcagtctggccggaaatcatggggtggtagatgttatgtattttttttatgaaaggttaataaatgagactgaaatctaagggtggttatt 42298074  T
Q  101 gtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccattttaatataattaaactccaat-gatttttcc 192  Q
    |||||||||||||||           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  42298075 gtgtcatgtcattct-----------tgataaaatcattcttgatatttagcattttccattttaatataattaaactccaatggatttttcc 42298156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 165
Target Start/End: Original strand, 47738281 - 47738388
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  158 ccatttta 165  Q
    ||||||||    
T  47738381 ccatttta 47738388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 36864969 - 36864827
Alignment:
Q  17 ggccgaaaatcatgggatggtgtgtgttatgtannnnnnnnatgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattctt 116  Q
    ||||| |||||||||||||||| ||||||||||        |||||| |||||||||||||||||| |||||||| |  |||||||||||||||||||||    
T  36864969 ggccggaaatcatgggatggtgggtgttatgtattttttatatgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattctt 36864870  T
Q  117 gaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||||| ||||||||||||||||||| || |||||||||||    
T  36864869 gaatcttttttgataaaatcattcttgatatctagcattttcc 36864827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 3456175 - 3456334
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| |||  |||    
T  3456175 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgatta 3456274  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
     |||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  3456275 gtgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 3456334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 33839705 - 33839791
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||||||||||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 33839791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 40328004 - 40328102
Alignment:
Q  61 aaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||| ||||||| ||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  40328004 aaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 40328102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 19650852 - 19650693
Alignment:
Q  2 ataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttatt 100  Q
    ||||||||||||  |||||| |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  |||||    
T  19650852 ataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 19650753  T
Q  101 gtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| || |||||||||||||    
T  19650752 gtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttccat 19650693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22426298 - 22426135
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    |||||||| |||||||||||| |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| ||||||   |  ||||    
T  22426298 aataaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgattat 22426199  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttt 164  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||| ||||    
T  22426198 tgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttttt 22426135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 30385570 - 30385672
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  30385570 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatttagcatttt 30385668  T
Q  158 ccat 161  Q
    ||||    
T  30385669 ccat 30385672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||||| ||||||| |||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 33113904 - 33114069
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    |||||||| |||||||||||| |||||||||| ||||| ||||||||||           ||||||| ||||||||||||| ||| |||||| | |  ||    
T  33113904 aataaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgatt 33114003  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttt 164  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||| ||||    
T  33114004 attgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttttt 33114069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 26612916 - 26613019
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||||||||||||| |||||||| |  |||||||| ||||| ||||||||||||||||| ||||||||||| |||| || || ||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  158 ccat 161  Q
    ||||    
T  26613016 ccat 26613019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 3137368 - 3137209
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| || || ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  3137368 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgatta 3137269  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  3137268 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 3137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 3574480 - 3574321
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    |||||||||||||  |||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||  | |  |||    
T  3574480 aataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgatta 3574381  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| || |||||||||||    
T  3574380 ttgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 8361924 - 8361834
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||| |||||||| |  ||||||||||||||||||||||||| ||||||||| ||||||||||||| || |||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttcc 8361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 24343720 - 24343823
Alignment:
Q  59 tgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttc 158  Q
    |||||||||||||||| ||||||| |||||||| |  ||||  | ||||||||||||||||||||| ||||||||||||||||||| || || |||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  159 catt 162  Q
    ||||    
T  24343820 catt 24343823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 34482783 - 34482683
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 34482685  T
Q  158 cc 159  Q
    ||    
T  34482684 cc 34482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 37216948 - 37216848
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||  ||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  37216948 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 37216850  T
Q  158 cc 159  Q
    ||    
T  37216849 cc 37216848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||| ||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattattgatatctagcatttt 8320379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||| |||||||  |  |||||||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||||||||||||| || ||||| |  || ||||| |||||||||||| ||| ||||||||||||||||||||| | || |||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 3089589 - 3089690
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||| ||||||||||||  ||||||||| |||||||||||||||| || |||||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcatttt 3089687  T
Q  158 cca 160  Q
    |||    
T  3089688 cca 3089690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 6042055 - 6042147
Alignment:
Q  66 ttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||||| |||||| | |  |||||||| ||||||||||||| ||||||||| |||||||||||||||| || |||||||||||    
T  6042055 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 6042147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 2754889 - 2754991
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| || ||| | |  |||||||| |||||||||||| |||||||||| ||||||| |||||||| || |||||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatgattcttgatatctagcatttt 2754987  T
Q  158 ccat 161  Q
    ||||    
T  2754988 ccat 2754991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 37522223 - 37522324
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  ||||| || |||||||||||| ||| |||||| |||||||||||||||| || |||||||||    
T  37522223 atgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 37522321  T
Q  158 cca 160  Q
    |||    
T  37522322 cca 37522324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 48161084 - 48161176
Alignment:
Q  66 ttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||||| |||||| | |  ||||||||||||||| |||||| || |||||| |||||||||||||||| || |||||||||||    
T  48161084 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttctt-ataaaatcattcttgatatctagcattttcc 48161176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 41224414 - 41224504
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||| ||| || ||||| |  |||||||| |||||||||||||||| ||||||||| ||||||||||||| || |||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttcc 41224504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 41883114 - 41883030
Alignment:
Q  61 aaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgag 145  Q
    ||||||| |||||| ||||||| ||| || |||  ||||| |  ||||||||||||||||||||||| ||||||||||| |||||    
T  41883114 aaaggttgataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttgag 41883030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 6041947 - 6041888
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  6041947 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 46919102 - 46919164
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttc 158  Q
    ||||| || ||||||||| |||||||||| ||||||||||||||||||| || || |||||||    
T  46919102 ttattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacattttc 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30385122 - 30385170
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||    
T  30385122 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9796983 - 9796935
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||| ||| |||||||||||||||| ||||| || |||||||    
T  9796983 aataaaatctctgtcgggccgaaaatcatggggtggtgggtcttatgta 9796935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 9797031 - 9797079
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| || |||||||||||||||| |||||||| |||||| |||||||    
T  9797031 ttattctgccatgtcattcttgaatttttcttgagaaaatctttcttga 9797079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33839642 - 33839690
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    |||||||||||| |||||||| |||||||||| ||||  ||||||||||    
T  33839642 aataaaatctcaatctggccgtaaatcatggggtggtaggtgttatgta 33839690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 42297409 - 42297357
Alignment:
Q  103 gtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||||||||||| ||  ||||||||||||||| ||||||| || |||||||    
T  42297409 gtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 42297357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 47738168 - 47738120
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| || ||| |||||||||||| ||||||||||||||| |||||||    
T  47738168 ttattctgccatatcattcttgaatatttcttgataaaatctttcttga 47738120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 38899680 - 38899510
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||| ||          ||||||| ||||||||||||||||| |||||| | | ||||    
T  38899680 aataaaatctcagtctggccgaaaatcatggggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggtta 38899581  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccattttaatat 169  Q
    ||||| |||||||||||||||| ||| || |||||||||||||||| || |||||||||||||||||||||    
T  38899580 ttgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttccattttaatat 38899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 3362889 - 3363048
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||           ||||||| ||||||||||||||||| |||||| | | |||    
T  3362889 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggtt 3362988  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttc 158  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||| || ||||||||||    
T  3362989 attgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 33584283 - 33584122
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  33584283 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 33584184  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||||    
T  33584183 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 33584122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 4892313 - 4892472
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  4892313 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgatta 4892412  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  4892413 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 4892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 8145486 - 8145644
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||| |||| || |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  8145486 aataaaatctcagcctggtcggaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 8145584  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  8145585 tgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcca 8145644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 12850912 - 12851069
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||           ||||||| ||||||||||||||||| |||||| | | |||    
T  12850912 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggtt 12851011  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattt 156  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||| || ||||||||    
T  12851012 attgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6043465 - 6043305
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||| ||||||| |||||||||| || || ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  6043465 aataaaatctcagcctggccggaaatcatggggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 6043366  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    |||| |||||||||||| ||| |||||| |||||||||||||||| || |||||||||||||    
T  6043365 tgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttccat 6043305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 12614633 - 12614532
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||||||||||||| |||||| | |  |||||||| |||||||||||| ||||||| ||||||||||||| ||||| || |||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  158 cc 159  Q
    ||    
T  12614533 cc 12614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 25398349 - 25398508
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  25398349 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 25398448  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| ||||||||| |||||| |||||| |||||||||||||||| || |||||||||||    
T  25398449 ttgtgccatgtcattgttgaatttttctt-ataaaatcattcttgatatctagcattttcc 25398508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 37321747 - 37321588
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    |||||||||||||||| |||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  37321747 aataaaatctcagtctagccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgatta 37321648  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| ||| |||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  37321647 ttgtgccatttcattcttgaatatttctt-ataaaatcattcttgatatctagcattttcc 37321588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 3521960 - 3521802
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    |||||||||| ||| |||||| |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  3521960 aataaaatcttagtttggccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 3521861  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||| |||||||||||| ||| |||||| |||||||||||||||| || |||||||||||    
T  3521860 tgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 3521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||| |||||||| |  |||||||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 14138779 - 14138937
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||| |||  || |||||||||| ||||| ||||||||||         ||||||| ||||||||||||| ||| |||||| | |  ||||    
T  14138779 aataaaatctcagcctgatcggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgattat 14138878  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||| ||||||||||||||||||||||| |||||||||||||| | || |||||||||||    
T  14138879 tgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 14138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 17545567 - 17545477
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||| ||| ||| ||||| ||||||||||||| || |||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcattttcc 17545477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 11361085 - 11360947
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||| ||| ||| |||||| |||  |||    
T  11361085 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgatta 11360986  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcat 138  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  11360985 ttgtgccatgtcattcttgaatctttctt-ataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 2477747 - 2477907
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    |||||||| |||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||| ||||||| |||||| | |  | |    
T  2477747 aataaaatttcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatca 2477846  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    ||||| ||||||||||||  ||||||||| |||||||||||||||| || ||||||||||||    
T  2477847 ttgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttcca 2477907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 4433961 - 4433845
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta-nnnnnnnnatgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||         ||||||| ||||||||| ||||||| |||||| | |  ||||    
T  4433961 aataaaatctcagtctggccggaaatcatgggatggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatctaaaggtgattat 4433862  T
Q  100 tgtgtcatgtcattctt 116  Q
    |||| ||||||||||||    
T  4433861 tgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 12614735 - 12614794
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||||| || |||||||    
T  12614735 ttattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 27482031 - 27482077
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattctt 142  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  27482031 ttattctgttatgtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31640894 - 31640846
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||    
T  31640894 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 31640846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 3362853 - 3362782
Alignment:
Q  84 atctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||||| | |||||| || ||||||||||||| |  ||||||||||||||| ||||||| || |||||||    
T  3362853 atctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 3362782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 22913056 - 22913115
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||| |||||||| |||||| ||||||| || |||||||    
T  22913056 ttattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 31640930 - 31640977
Alignment:
Q  84 atctaaggatagttattgtgtcatgtcattcttgaatctttcttgata 131  Q
    |||||||| | |||||| || |||||||||||||||||||||||||||    
T  31640930 atctaagggtggttattctgccatgtcattcttgaatctttcttgata 31640977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 38899716 - 38899787
Alignment:
Q  84 atctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||||| | |||||| || ||||||||||||| |  ||||||||||||||| ||||||| || |||||||    
T  38899716 atctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 38899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 6043522 - 6043572
Alignment:
Q  105 catgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  6043522 catgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 10458460 - 10458407
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagattt 149  Q
    ||||| || |||||||||||||||| ||||||||||||||  ||||||| ||||    
T  10458460 ttattttgccatgtcattcttgaatttttcttgataaaatttttcttgatattt 10458407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 27481880 - 27481843
Alignment:
Q  105 catgtcattcttgaatctttcttgataaaatcattctt 142  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  27481880 catgtcattcttgaatttttcttgataaaatctttctt 27481843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 8145438 - 8145390
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| || |||||||||||||||  ||||||||||||||| |||||||    
T  8145438 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttga 8145390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 9293530 - 9293367
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||           ||||||| ||||||||||||||||| |||||||| |  ||    
T  9293530 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgatt 9293431  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatt 162  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||    
T  9293430 attgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccatt 9293367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 3989187 - 3989342
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  3989187 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttatta 3989286  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| || |||||||    
T  3989287 ttgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 22592880 - 22592988
Alignment:
Q  58 atgaaaggttaataaatgagactgaga--tctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||||||||||||||| ||||||| |  ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  156 ttccatttt 164  Q
    |||| ||||    
T  22592980 ttccttttt 22592988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 33380318 - 33380479
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  33380318 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgatta 33380417  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||||    
T  33380418 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 33380479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 10661998 - 10662161
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    ||||||||||||| ||||||| ||||||| || ||||| ||||||||||           ||||||| ||||||||||||||||| |||||| | |  ||    
T  10661998 aataaaatctcagcctggccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 10662097  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatt 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| || ||||||||||||||    
T  10662098 attgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccatt 10662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7475462 - 7475299
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  7475462 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 7475363  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccattt 163  Q
    || |||||| |||||||||||| |||||| |||||||||||||||| || |||||||||||||||    
T  7475362 ttatgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccattt 7475299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 23268016 - 23267857
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  23268016 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 23267917  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||| ||| |||||| |||||||||||||||| || |||||||||||    
T  23267916 ttgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 31174788 - 31174633
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||||||| ||| |||||||||| ||||| ||||||||||         ||||||| ||||||||||||| ||| |||||| |    ||||    
T  31174788 aataaaatctcagtctgaccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagtttat 31174689  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattt 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  31174688 tgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 35160868 - 35161039
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn----atgaaaggttaataaatgagactgagatctaaggatagt 96  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||            ||||||| ||||||||||||||||| |||||| | |  |    
T  35160868 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 35160967  T
Q  97 tattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccattttaatat 169  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||| ||| ||||    
T  35160968 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccaattttatat 35161039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 16767357 - 16767285
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgat 130  Q
    ||||||||||||||||||||||||| |||||||  |  |||||||||||||||||||||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 13355018 - 13355118
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| ||||||   |  |||||||| ||||||||||||| ||||||||| |||||||||||||||| || |||||||||    
T  13355018 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 13355116  T
Q  158 cc 159  Q
    ||    
T  13355117 cc 13355118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 43331092 - 43331182
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||| |||||| | |  |||||||  |||||||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcc 43331182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||| || ||||| |  ||||||||||||||||||||||||| ||||||||| ||||||||||||| || |||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgat-aaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 9723576 - 9723679
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    |||||| || ||||||| ||||||| |||||| | |  ||||| ||||||||||||||| ||| ||||||||| ||||||||||||| || || ||||||    
T  9723576 atgaaaagtgaataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacatttt 9723675  T
Q  158 ccat 161  Q
    ||||    
T  9723676 ccat 9723679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcat 138  Q
    ||||||||||||||| |||||||| |  ||| |||||||||||||| || |||||||||||||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 14941259 - 14941199
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttga 118  Q
    ||||||||||||||||| ||| ||| ||||||||||  |||||||||||||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 14941368 - 14941427
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || ||||||||||||||||||||||| |||||||| ||||||| || |||||||    
T  14941368 ttattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21936192 - 21936325
Alignment:
Q  1 aataaaatctc-agtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    ||||||||||| || ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||| ||||| |||||| | |  ||    
T  21936192 aataaaatctctagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtgatt 21936291  T
Q  98 attgtgtcatgtcattcttgaatctttcttgata 131  Q
    |||||| ||||||||||||| ||| |||||||||    
T  21936292 attgtgccatgtcattcttggatcattcttgata 21936325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 27847695 - 27847649
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattctt 142  Q
    ||||| |||||||||||||||||||||||||| |||||||| |||||    
T  27847695 ttattctgtcatgtcattcttgaatctttcttaataaaatctttctt 27847649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16767426 - 16767378
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||||||||||| ||||||| || ||||| ||||||||||    
T  16767426 aataaaatctcagtctggccggaaatcatagggtggtgggtgttatgta 16767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 9293578 - 9293637
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  9293578 ttattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 9723468 - 9723409
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||| |||||||||| |||||||| ||||| | || |||||||    
T  9723468 ttattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaa 119  Q
    ||||||||||||||| |||||||| |  |||||||| |||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 13354921 - 13354861
Alignment:
Q  84 atctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    |||||||| || ||||| || ||| |||||||||||  ||||||||||||||| |||||||    
T  13354921 atctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttga 13354861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 27847791 - 27847831
Alignment:
Q  119 atctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||||| |||||||| || |||||||||||    
T  27847791 atctttcttgataaaattattcttgatatctagcattttcc 27847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 47961 - 48123
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| |||  ||||    
T  47961 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgattat 48060  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccattt 163  Q
    ||||  |||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  48061 tgtgctatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccattt 48123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 47913 - 47865
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| || |||||||||||||||  ||||||||||||||| |||||||    
T  47913 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttga 47865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 17655541 - 17655699
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttat--gtannnnnnnnatgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| ||||||||||||| || |||||||  |||        ||||||||||||||||||||||||| |||||| | || |||    
T  17655541 aataaaatctcagcctggccggaaatcatgggatgatgggtgttatatgtattttttttatgaaaggttaataaatgagactgaaatctaaaggtaatta 17655640  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    || ||||||||||||||| ||||||||||||||||||||||||| | || |||||||||    
T  17655641 ttatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 53123142 - 53123301
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| |||  |||    
T  53123142 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgatta 53123241  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  53123242 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 53123301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 21802276 - 21802115
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgt---gtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagt 96  Q
    ||||||||||||||||||||| |||||||||| |||||    ||||||||||         ||||||| ||||||||||||||||| |||||||| |  |    
T  21802276 aataaaatctcagtctggccggaaatcatggggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaagggtgat 21802177  T
Q  97 tattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  21802176 tattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 21802115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 44893537 - 44893698
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  44893537 aataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 44893636  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    ||||| |||||||||||| ||| |||||| |||||||||||||||| || |||||||||||||    
T  44893637 ttgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttccat 44893698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 44893167 - 44893008
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  44893167 aataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 44893068  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||| ||| |||||| |||||||||||||||| || |||||||||||    
T  44893067 ttgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 44893008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 9088981 - 9089138
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| |||  |||    
T  9088981 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgatta 9089080  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||    
T  9089081 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 36073461 - 36073623
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||| ||| ||| |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  36073461 aataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 36073560  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccattt 163  Q
    |||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||||||    
T  36073561 tgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccattt 36073623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 24128350 - 24128507
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| |||||  |||||||||          ||||||| ||||||||||||||||| |||||| | || |||    
T  24128350 aataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaatta 24128449  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||| || |||||||||    
T  24128450 ttgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  60 gaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||||||| |||||||||| | ||||||| ||  ||||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 11314144 - 11314046
Alignment:
Q  61 aaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||||||||||| |||||   |||||||| |  |||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcc 11314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30563320 - 30563452
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||||||||||||| ||||||| |||||||  |  |||    
T  30563320 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgatta 30563419  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgata 131  Q
    |||||||||||||||||||||||||||||||||    
T  30563420 ttgtgtcatgtcattcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 36073058 - 36073221
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn------atgaaaggttaataaatgagactgagatctaaggata 94  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||              ||||||| ||||||||||||||||| |||||| | |     
T  36073058 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaaggtg 36073157  T
Q  95 gttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||| |||| || |||||||||||    
T  36073158 gttattgtgccatgtcattcttgaatttttctt-ataaaatcatttttgatatctagcattttcc 36073221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 37219801 - 37219902
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||||| ||| ||| ||||||||||  ||||| || |||||||||||| ||||||||||||||||||||||||||| || || ||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  158 cc 159  Q
    ||    
T  37219901 cc 37219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 46441955 - 46442114
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||  ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  46441955 aataaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 46442054  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  46442055 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 46442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 50156532 - 50156374
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||||| |  |||    
T  50156532 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaagg-tgatta 50156434  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    || ||||||||||||||||||| |||||| |||||||||||||||| || || ||||||||    
T  50156433 ttatgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacattttcc 50156374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 4751557 - 4751717
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    |||||||||||||||||| || |||||||||| ||||| ||||||||||           ||||||| ||||||||||||||||| |||||| | | |||    
T  4751557 aataaaatctcagtctggtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggtt 4751656  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||| |||||||||||| ||| |||||| ||||||| |||||||| || |||||||||||    
T  4751657 attgtgccatgtcattcttaaatttttctt-ataaaattattcttgatatctagcattttcc 4751717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 22199372 - 22199529
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||| ||||||  |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  22199372 aataaaatctcagcctggccagaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 22199470  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||| || |||||||||||    
T  22199471 tgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 22199529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 47290177 - 47290341
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          |||||||  |||||||||||||||| |||||| | |  |||    
T  47290177 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgatta 47290276  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttt 164  Q
    ||||  |||||||||||||||| |||||| |||||||||||||||| || ||||||||||| ||||    
T  47290277 ttgtaccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttttt 47290341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 2624948 - 2625107
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||||||||||| |||||||||  ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  2624948 aataaaatctcagtctggccggaaatcatggagtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 2625047  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||  |||||||| ||||||||||||| |||||||||||||||| || || ||||||||    
T  2625048 ttgtgctatgtcatttttgaatctttctt-ataaaatcattcttgatatctaacattttcc 2625107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 31078773 - 31078614
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| || || ||||||||||          ||||||| ||||||||||||| ||| |||||| |||  |||    
T  31078773 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgatta 31078674  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||||||| ||| || |||||||||||||||| || |||||||||||    
T  31078673 ttgtgccatgtcattcttgaat-tttttttataaaatcattcttgatatctagcattttcc 31078614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 37934895 - 37934758
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    |||||||||||||||||| || |||| |||||||||||  |||||||||         ||||||||||||||||||||| ||| |||||||| |  ||||    
T  37934895 aataaaatctcagtctggtcggaaattatgggatggtggttgttatgtatttttttttatgaaaggttaataaatgagattgaaatctaagggtgattat 37934796  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatca 137  Q
    |||||||| ||||| ||||||||||||| |||||||||    
T  37934795 tgtgtcatatcattattgaatctttcttaataaaatca 37934758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 10442672 - 10442582
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||| |||||| | |  |||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  10442672 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 10442582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 7745066 - 7744907
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||  ||||||||||||| ||| |||||| | |  |||    
T  7745066 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgatta 7744967  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||  |||||||||||||||||||||| |||||||||||||||| || || ||||||||    
T  7744966 ttgtgcaatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 7744907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 25063423 - 25063367
Alignment:
Q  105 catgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  25063423 catgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttccat 25063367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 44744607 - 44744698
Alignment:
Q  63 aggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttc 158  Q
    |||||||||||| ||||||| ||||||||||| |||||| |||||||||||||||||    |||||||||||||||| |||| || || |||||||    
T  44744607 aggttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaa----tcttgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||| ||||||||||  ||||||||  ||||||||||| ||| ||||||||| ||||||||||||| || |||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgat-aaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||| ||||||| |||||| | |  |||||||| ||||||||||||| |||||| || |||||||||||||||| || |||||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttt-tttataaaatcattcttgatatctagcatttt 33530481  T
Q  158 cc 159  Q
    ||    
T  33530480 cc 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 49387782 - 49387682
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||| |||||||||||||||| |||||| |||||||||| ||||| || || ||||||    
T  49387782 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcatccttgatatctaacatttt 49387684  T
Q  158 cc 159  Q
    ||    
T  49387683 cc 49387682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 23964359 - 23964274
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||||| ||||||||||||| ||| |||||| |||  ||||| || |||||||||||| |||||||||| ||||||||||||||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttctt-ataaaatcattcttga 23964274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 36073349 - 36073252
Alignment:
Q  66 ttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccattt 163  Q
    ||||||||| ||||||| |||||||  || ||||| || ||| |||||||| |||||||||||||||||||||| ||   || |||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttccattt 36073252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 33530690 - 33530749
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||| ||||||||||||||| ||||||| || |||||||    
T  33530690 ttattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 36073022 - 36072951
Alignment:
Q  84 atctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||||| | |||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  36073022 atctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 36073745 - 36073793
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| ||||||||||||||| |||||||||| |||||||| |||||||    
T  36073745 ttattttgtcatgtcattcttaaatctttcttcataaaatctttcttga 36073793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 4751521 - 4751450
Alignment:
Q  84 atctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||||| | |||||| || ||||||||||||| |  ||||||||||||||| ||||||| || |||||||    
T  4751521 atctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 4751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10442743 - 10442696
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgt 48  Q
    ||||||||||||| ||||||| |||||||||| ||||| |||||||||    
T  10442743 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgt 10442696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 10442791 - 10442850
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  10442791 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 22199324 - 22199265
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  22199324 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 24128314 - 24128243
Alignment:
Q  84 atctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||||||||  ||||| || |||||||||||||||  |||||||| |||||| ||||||| || |||||||    
T  24128314 atctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 24392730 - 24392671
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||| |||||||| |||||| ||||||| || |||||||    
T  24392730 ttattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 31078821 - 31078880
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  31078821 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 36073697 - 36073650
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgt 48  Q
    |||||||||||||| |||||| |||||||||| ||||| |||||||||    
T  36073697 aataaaatctcagtttggccggaaatcatggggtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 49387890 - 49387949
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  49387890 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 53999020 - 53998976
Alignment:
Q  118 aatctttcttgataaaatcattcttgagatttagcattttccatt 162  Q
    ||||||||||||||||||||||||||| || ||  ||||||||||    
T  53999020 aatctttcttgataaaatcattcttgatatctaatattttccatt 53998976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 71; Significance: 3e-32; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 16095 - 16259
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||||          ||||||| ||||||||||||||||| |||||| |||  |||    
T  16095 aataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgatta 16194  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttt 164  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || ||||||||||| ||||    
T  16195 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttttt 16259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26047 - 26211
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  26047 aataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 26146  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttt 164  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || ||||||||||| ||||    
T  26147 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttttt 26211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8513 - 8561
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  8513 aataaaatctcaggctggccggaaatcatgggatggtgggtgttatgta 8561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 8465 - 8417
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| || |||||||||||||||  ||||||||||||||| |||||||    
T  8465 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttga 8417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 16047 - 15999
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| || |||||||||||||||  ||||||||||||||| |||||||    
T  16047 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttga 15999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 25999 - 25951
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| || |||||||||||||||  ||||||||||||||| |||||||    
T  25999 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttga 25951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 34665493 - 34665649
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    |||||||||||||  ||||||||||||||||  ||||| ||||||||||         ||||||||||||||||||||||||| |||||||| |  ||||    
T  34665493 aataaaatctcagcttggccgaaaatcatggagtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaagggtgattat 34665592  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  34665593 tgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20091755 - 20091598
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| || |||| |||||||||| ||||| ||||||||||          ||||||||||||||||||||||||| |||||||| |  |||    
T  20091755 aataaaatctcagcctagccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgatta 20091656  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  20091655 ttgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 37986009 - 37985851
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||         ||||||| |||||||||| |||||| |||||| | |  ||||    
T  37986009 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgattat 37985910  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  37985909 tgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 37985851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 38017047 - 38017201
Alignment:
Q  3 taaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnnatgaaaggttaataaatgagactgagatctaaggatag-ttattg 101  Q
    ||||||||||| ||||||| |||||||||| ||||| ||||||||||         |||||| ||||||||||||||||| |||||| | ||  ||||||    
T  38017047 taaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttgaaagattaataaatgagactgaaatctaaaggtaaattattg 38017146  T
Q  102 tgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    |||||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  38017147 tgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  59 tgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    |||||||||||||||| ||||||| |||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 6108187 - 6108028
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  6108187 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgatta 6108088  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  6108087 ttgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 42754996 - 42754834
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  42754996 aataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 42754897  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatt 162  Q
    ||||  |||||||||||| ||| |||||| |||||||||||||||| || ||||||||||||||    
T  42754896 ttgtaccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttccatt 42754834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 17841804 - 17841643
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  17841804 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 17841705  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||||    
T  17841704 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 17841643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 30055686 - 30055788
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||||||||||| | |||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  30055686 atgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcatttt 30055784  T
Q  158 ccat 161  Q
    ||||    
T  30055785 ccat 30055788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25581193 - 25581031
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||| ||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  25581193 aataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 25581094  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatt 162  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||| || ||||||||||||||    
T  25581093 ttgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccatt 25581031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 10044518 - 10044623
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||| ||| |||||| | |  |||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 10044616  T
Q  158 ccatttt 164  Q
    |||||||    
T  10044617 ccatttt 10044623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 26042067 - 26041908
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||| ||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  26042067 aataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 26041968  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  26041967 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 26041908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 40780083 - 40779924
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| |||||  |||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  40780083 aataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 40779984  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  40779983 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 40779924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 32064856 - 32065016
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    ||||||||||||| ||||||| |||||||||| || || ||||||||||           ||||||| ||||||||||||||||| |||||| | |  ||    
T  32064856 aataaaatctcagcctggccggaaatcatgggctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 32064955  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||| || |||||||||||    
T  32064956 attgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 32065016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 41819663 - 41819590
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgata 131  Q
    |||| |||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||    
T  41819663 atgataggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatatctagcatttt 14129127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 31347659 - 31347564
Alignment:
Q  70 taaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccattttaa 166  Q
    ||||||||||||| |||||| | |  |||||||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcctttttaa 31347564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 1645919 - 1645759
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    ||||||||||||| |||| || |||||||||| ||||| ||||||||||           ||||||| ||||||||||||||||| |||||| | |  ||    
T  1645919 aataaaatctcagcctggtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 1645820  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||| |||||||||||||  |||||||| |||||||||||||||| || |||||||||||    
T  1645819 attgtgccatgtcattcttggttctttctt-ataaaatcattcttgatatctagcattttcc 1645759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||| ||||||||||||| ||||||||| |||||||||||||||| || |||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 3596995 - 3596835
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||| ||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  3596995 aataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 3596896  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    ||||| ||| |||||||| ||| |||||| |||||||||||||||| || ||||||||||||    
T  3596895 ttgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcca 3596835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 1503730 - 1503638
Alignment:
Q  66 ttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||||| |||||| | |  |||||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 1503638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 15187730 - 15187830
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  ||||||||  |||||||||||| ||||||||| |||||||||||||||| || |||||||||    
T  15187730 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 15187828  T
Q  158 cc 159  Q
    ||    
T  15187829 cc 15187830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 30834931 - 30834850
Alignment:
Q  78 actgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcc 30834850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 32393969 - 32394111
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    |||||||||||||||| ||||||||||||||| ||||  ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  32393969 aataaaatctcagtctagccgaaaatcatggggtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 32394068  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    |||| |||||||||||| ||| ||| || ||||||||||||||||    
T  32394069 tgtg-catgtcattcttaaatattt-tttataaaatcattcttga 32394111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 7022159 - 7022249
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||| ||||||||    |||||||| | |||||||||||||||||||||||| |||||||| |||| || |||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgat-aaatcattgttgatatctagcattttcc 7022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 3890506 - 3890412
Alignment:
Q  62 aaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattt 156  Q
    ||||||||||||| ||| | | |||||| | |  ||||| || ||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  3890506 aaggttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 39772697 - 39772612
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||||| |||||||| || ||||| |||||| | |  |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  39772697 atgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttga 39772612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 7017743 - 7017653
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||| ||||||||||  ||||| |   ||||||||||| ||| ||||||||| ||||||||||||| || |||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgat-aaatcattcttgatatctagcattttcc 7017653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 35353152 - 35353296
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||| | ||||| ||||||||||          ||||||| ||||||||||||| | | || ||| | |  |||    
T  35353152 aataaaatctcagcctggccggaaatcatgaggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgatta 35353251  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||    
T  35353252 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttga 35353296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 1886633 - 1886669
Alignment:
Q  108 gtcattcttgaatctttcttgataaaatcattcttga 144  Q
    |||||||||||||||||||||||||||||||||||||    
T  1886633 gtcattcttgaatctttcttgataaaatcattcttga 1886669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 8453945 - 8454065
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||| ||||||| |||| ||||  ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  8453945 aataaaatctcagcctggccggaaattatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 8454044  T
Q  100 tgtgtcatgtcattcttgaat 120  Q
    |||| ||||||||||||||||    
T  8454045 tgtgccatgtcattcttgaat 8454065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27835407 - 27835288
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| || | || |||||||||||||||| ||||||||||          || |||||||||||||||||| ||| ||||||||||  |||    
T  27835407 aataaaatctcagcctagacggaaatcatgggatggtgggtgttatgtatttttgttttataaaaggttaataaatgagattgaaatctaaggatgatta 27835308  T
Q  99 ttgtgtcatgtcattcttga 118  Q
    ||||||||| ||||| ||||    
T  27835307 ttgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 24844756 - 24844653
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||| | ||| | | |||||||  |  ||||| || |||| ||||||| |||||||||||||||||||||| |||| || || ||||||    
T  24844756 atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacatttt 24844657  T
Q  158 ccat 161  Q
    ||||    
T  24844656 ccat 24844653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24211507 - 24211459
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||    
T  24211507 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41819732 - 41819684
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||| | ||||| |||||||||| ||||||||||||||||    
T  41819732 aataaaatctcagcccggccggaaatcatggggtggtgtgtgttatgta 41819684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 8453897 - 8453838
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||||||  |||||||| |||||| ||||||| || |||||||    
T  8453897 ttattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 15187635 - 15187564
Alignment:
Q  84 atctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||||| || ||||| || ||| |||||||||||  ||||||||||||||| ||||||| || |||||||    
T  15187635 atctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 26042118 - 26042177
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||||||  ||||||||||||||| ||||| | || |||||||    
T  26042118 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 27782119 - 27782178
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || ||||||||| |||||||||||||||||||||  ||||||| || |||||||    
T  27782119 ttattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 32064808 - 32064749
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  32064808 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 34665445 - 34665386
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  34665445 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 24844866 - 24844920
Alignment:
Q  102 tgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattt 156  Q
    ||||||||||||||||||| |||||| |||||||  ||||||| || ||||||||    
T  24844866 tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7017819 - 7017771
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||| ||| ||||| |||||||||| ||||| ||||||||||    
T  7017819 aataaaatctctgtcgggccggaaatcatggggtggtgggtgttatgta 7017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 38017034 - 38016986
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| || |||||||||||||||  ||||||||||||||| |||||||    
T  38017034 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttga 38016986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 42755044 - 42755092
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| || |||||||||||||||  ||||||||||||||| |||||||    
T  42755044 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttga 42755092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 25973533 - 25973679
Alignment:
Q  14 tctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnnatgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcatt 113  Q
    ||||||||||||||||||| ||||| ||||||||||        ||||||| ||||||||||||||||| || ||| | |  ||||||||||||||||||    
T  25973533 tctggccgaaaatcatggggtggtgggtgttatgtattttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcatt 25973632  T
Q  114 cttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    ||||||| |||||| |||||||||||||||| || |||||||||||||    
T  25973633 cttgaatttttctt-ataaaatcattcttgatatctagcattttccat 25973679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 44094809 - 44094967
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  44094809 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgattat 44094908  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||| || |||||||||||    
T  44094909 tgtgtcatgtcattcttggatctttctt-ataaaataattcttgatatctagcattttcc 44094967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 37821788 - 37821628
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| |||||||||||||||||| || || ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  37821788 aataaaatctcagcctggccgaaaatcatggggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 37821689  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| || ||||||||||||    
T  37821688 ttgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcca 37821628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 20305085 - 20304920
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn---atgaaaggttaataaatgagactgagatctaaggatagtt 97  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||           ||||||| || |||||||||||||| |||||| | |  ||    
T  20305085 aataaaatctcagcttggccgaaaatcatgggatggtgggtgttatgtatttttttttttatgaaagattgataaatgagactgaaatctaaaggtgatt 20304986  T
Q  98 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttt 164  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||| ||||    
T  20304985 attgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccttttt 20304920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 51737616 - 51737780
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||| |||||||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  51737616 aataaaatctcagcctgaccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 51737715  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttt 164  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || ||||||||||| ||||    
T  51737716 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccttttt 51737780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 19015515 - 19015674
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  19015515 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgatta 19015614  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  19015615 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcattttcc 19015674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 36966662 - 36966503
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  36966662 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 36966563  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| ||||| |||||||||| |||||| |||||||||||||||| || |||||||||||    
T  36966562 ttgtgccatgttattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 36966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 41876396 - 41876237
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  41876396 aataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 41876297  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||  ||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  41876296 ttgtgctatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 41876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 40215099 - 40215257
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||  ||||||||||||||||| |||||| | |  |||    
T  40215099 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgatta 40215198  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttc 158  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||    
T  40215199 ttgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 25463787 - 25463946
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||| | |||||| | |  |||    
T  25463787 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgatta 25463886  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||| || |||||||||||    
T  25463887 ttgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 32000151 - 32000059
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    ||||||||||||||| |||||||| |  |||||||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttccat 32000059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 33786516 - 33786426
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||| |||||||| |  |||||||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattttcc 33786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 6883598 - 6883762
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |   ||    
T  6883598 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaata 6883697  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttt 164  Q
    || || |||||||||||||||| |||||| |||||||||||||||| || ||||||||||| ||||    
T  6883698 ttatgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccgtttt 6883762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 3559787 - 3559887
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| || ||| | |  |||||||||||| ||||||||| ||||||||| |||||||||||||||| || |||||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 3559885  T
Q  158 cc 159  Q
    ||    
T  3559886 cc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 18404618 - 18404718
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| ||||||   |  |||||||| |||||||||||| |||||||||| |||||||||||||||| || |||||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcatttt 18404716  T
Q  158 cc 159  Q
    ||    
T  18404717 cc 18404718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||||||||||| |||||||| |  |||||||| |||||||||||||||| ||||||||| ||||||||||||| || |||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 167
Target Start/End: Complemental strand, 44690914 - 44690808
Alignment:
Q  61 aaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    |||| ||||||||| ||||||  |||||||| |  ||||| || ||||||||||||||||||||||||||||||||||| |||| || || |||||| |     
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttttct 44690815  T
Q  161 ttttaat 167  Q
    |||||||    
T  44690814 ttttaat 44690808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 52064434 - 52064373
Alignment:
Q  97 tattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttc 158  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||| || ||||||||||    
T  52064434 tattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 19722956 - 19722893
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| || || |||||||||    
T  19722956 ttattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcca 19722893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 9910247 - 9910085
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatg----tannnnnnnnatgaaaggttaataaatgagactgagatctaaggatagt 96  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||||||    |         ||||||| ||||||||| || |||| |||||| | |  |    
T  9910247 aataaaatctcagtatggccggaaatcatggggtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaatctaaaggtgat 9910148  T
Q  97 tattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||||| || || |||||||||    
T  9910147 tattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacattttcca 9910085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 33786637 - 33786696
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattt 156  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||    
T  33786637 ttattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 32000257 - 32000328
Alignment:
Q  84 atctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||||| | |||||| ||||||||||||||||||| |||||||| |||||| ||||||| || |||||||    
T  32000257 atctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 27523098 - 27523050
Alignment:
Q  111 attcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||    
T  27523098 attcttgaatctttcttgataaaatcattcttgatatataacattttcc 27523050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44690983 - 44690935
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||||||||||| |||||||||| || || ||||||||||    
T  44690983 aataaaatctcagtctggccggaaatcatggggtgttgggtgttatgta 44690935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 16045800 - 16045859
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  16045800 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 40215051 - 40214992
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  40215051 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 40273765 - 40273706
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||| |||||||| |||||| ||||||| || |||||||    
T  40273765 ttattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 27523257 - 27523305
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||| ||||||||||||||| ||| ||||||||||||||  |||||||    
T  27523257 ttattctgtcatgtcattcttaaatttttcttgataaaattgttcttga 27523305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40273813 - 40273861
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||| ||| ||||| |||||||||| ||||| ||||||||||    
T  40273813 aataaaatctctgtcgggccggaaatcatggggtggtgggtgttatgta 40273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 4974689 - 4974532
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    |||||||||||||| |||||| |||||||| | ||||| ||||||||||          ||||||||||||||||||||||||| |||||||| |  |||    
T  4974689 aataaaatctcagtttggccggaaatcatgaggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgatta 4974590  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||| |||||||||||||||||||| || |||||||||||||||| || |||||||||    
T  4974589 ttgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 30848680 - 30848845
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||||||||          ||||||| ||||||||||||||||| || ||| | |  |||    
T  30848680 aataaaatctcagtctggccggaaatcatgggatagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgatta 30848779  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttta 165  Q
    ||||| |||||||||||||||| |||||| |||||| ||||||||| || |||||||||||||||||    
T  30848780 ttgtgccatgtcattcttgaatttttctt-ataaaagcattcttgatatctagcattttccatttta 30848845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 45637823 - 45637981
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||||||||||| |||||||||| |||||  |||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  45637823 aataaaatctcagtctggccggaaatcatggggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 45637922  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||| ||||||||||||||||||||||| |||||||||||||| | || |||||||||||    
T  45637923 tgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 45637981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 24395083 - 24395243
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||  ||||||| |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  24395083 aataaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattat 24395182  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccat 161  Q
    |||| |||||||||||||||||||| || |||||||||||||||| || |||||||||||||    
T  24395183 tgtgccatgtcattcttgaatcttt-tttataaaatcattcttgatatctagcattttccat 24395243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 29737314 - 29737400
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttga 144  Q
    ||||||||||||||||||||||||| |||||||| |  |||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttga 29737400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 20009991 - 20009895
Alignment:
Q  61 aaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    |||||||||||||||||||| | ||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||| ||| || || ||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 3962090 - 3962248
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    |||||||||||||  |||||| |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  3962090 aataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 3962189  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||| ||||||||||||| || |||||| |||||||||||||||| || |||||||||||    
T  3962190 tgtgccatgtcattcttggatatttctt-ataaaatcattcttgatatctagcattttcc 3962248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 35445567 - 35445667
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||||||| |||||||||||| |||||| |||||||||||||||| || |||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 35445665  T
Q  158 cc 159  Q
    ||    
T  35445666 cc 35445667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 36790334 - 36790265
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatttta 165  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||    
T  36790334 ttattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttccatttta 36790265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 48880881 - 48880722
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||          ||||||| ||||||||||| ||||| ||||||   |  |||    
T  48880881 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgatta 48880782  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  48880781 ttgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 48880722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 15238564 - 15238654
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||| ||| ||| ||||| ||||||||||||| || |||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcattttcc 15238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 15577804 - 15577642
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-----atgaaaggttaataaatgagactgagatctaaggatag 95  Q
    |||| |||||||||||||||| |||||||||| ||||| ||||||||||             || |||| ||||||||||||||||| |||||| | |      
T  15577804 aatataatctcagtctggccggaaatcatgggttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaaatctaaaggtga 15577705  T
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||||||| || |||||||||||    
T  15577704 ttattgtgacatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 15577642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||| ||| |||||| | |  |||||||| ||||||||||||||||||||||| |||||||||||||||| || || ||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 34483106  T
Q  158 cc 159  Q
    ||    
T  34483107 cc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 42611922 - 42612081
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    |||||||| |||||||| ||| |||||||||| ||||| ||||||||||          ||||||| ||||||||| ||||||| |||||| | |  |||    
T  42611922 aataaaatttcagtctgaccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatta 42612021  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||| ||||||||||||  ||||||||| |||||||||||||||| || |||||||||||    
T  42612022 ttgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttcc 42612081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 42696253 - 42696354
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    |||||| |||||||||||||||||| |||||||| |  |||||||  |||||||||||||||| ||| |||||||||||||| |||| || || ||||||    
T  42696253 atgaaaagttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacatttt 42696352  T
Q  158 cc 159  Q
    ||    
T  42696353 cc 42696354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttc 158  Q
    ||||||||||||||| |||||||| |  |||||||| ||||||||| || ||||||||||||| ||||||||||||| || ||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgat-aaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 15329444 - 15329544
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| ||||||   |  |||||||| |||||||||||||||| |||||| |||||||||||||| | || |||||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattctttatatctagcatttt 15329542  T
Q  158 cc 159  Q
    ||    
T  15329543 cc 15329544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 35876414 - 35876517
Alignment:
Q  58 atgaaaggttaataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    ||||||| ||||||||||||||||| |||||| | |  |||||||| ||||||||| ||  || |||||| |||||||||||||||| || |||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttctt-ataaaatcattcttgatatctagcatttt 35876512  T
Q  158 ccatt 162  Q
    |||||    
T  35876513 ccatt 35876517  T

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Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  74 tgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    ||||||||| |||||| | |  |||||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 25167651  T

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Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 18037157 - 18037247
Alignment:
Q  68 aataaatgagactgagatctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcc 159  Q
    |||||||| |||||| |||||||| |  |||||||  |||||||||||| ||||||||||||| |||||||| |||| || |||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgat-aaatcattgttgatatctagcattttcc 18037247  T

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Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35444669 - 35444714
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttat 46  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||    
T  35444669 aataaaatctcagcctggccgaaaatcatgggatggtgggtgttat 35444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 15329336 - 15329277
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  15329336 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 48880929 - 48880988
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  48880929 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25167804 - 25167756
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||||||||||| |||||||||| || || ||||||||||    
T  25167804 aataaaatctcagtctggccggaaatcatggggtgatgggtgttatgta 25167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34482946 - 34482993
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  34482946 aataaaatctcagtctggccggaaatcatggg-tggtgggtgttatgta 34482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 3962042 - 3961983
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||| ||  ||||||||||||||| ||||||| || |||||||    
T  3962042 ttattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 4974737 - 4974796
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  4974737 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 15577852 - 15577911
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  15577852 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 42611874 - 42611815
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  42611874 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 45637775 - 45637716
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || |||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  45637775 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15329384 - 15329429
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttat 46  Q
    ||||||||||||| ||||||| |||||||||| ||||| |||||||    
T  15329384 aataaaatctcagactggccggaaatcatggggtggtgagtgttat 15329429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 24395036 - 24394976
Alignment:
Q  95 gttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||| || |||||||||||| ||  ||||||||||||||| ||||||| || |||||||    
T  24395036 gttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 24394976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 36790459 - 36790527
Alignment:
Q  87 taaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| || ||||| || |||||||||||| ||| ||||||||||||| | ||||||| || |||||||    
T  36790459 taagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcatt 36790527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37477034 - 37476986
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgta 49  Q
    ||||||||||| ||| ||||| |||||||||| ||||| ||||||||||    
T  37477034 aataaaatctctgtcgggccggaaatcatggggtggtgggtgttatgta 37476986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 37477073 - 37477141
Alignment:
Q  87 taaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    |||||||  ||||| || |||||||||||| ||| |||||||| |||||| ||||||| || |||||||    
T  37477073 taaggatgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcatt 37477141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 4507 - 4669
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  4507 aataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 4606  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttccatt 162  Q
    ||||| ||| |||||||| ||| |||||| |||||||||||||||| || ||||||||||||||    
T  4607 ttgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcattttccatt 4669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 12953 - 13110
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| ||||||| |||||||||| |||||  |||||||||          ||||||| ||||||||||||||||| |||||| | || |||    
T  12953 aataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaatta 13052  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatttt 157  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||| || |||||||||    
T  13053 ttgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 12917 - 12846
Alignment:
Q  84 atctaaggatagttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||||||||  ||||| || |||||||||||||||  |||||||| |||||| ||||||| || |||||||    
T  12917 atctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 11732 - 11892
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn--atgaaaggttaataaatgagactgagatctaaggatagtta 98  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||| |||||| | |  |||    
T  11732 aataaaatctcagcctggccgaaaatcatggggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 11831  T
Q  99 ttgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    ||||| |||||||||||| ||| |||||| |||||||||||||||| || || |||||||||    
T  11832 ttgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattttcca 11892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 11684 - 11625
Alignment:
Q  96 ttattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcatt 155  Q
    ||||| ||||||||||||||||||  ||||||||||||||| ||||||| || |||||||    
T  11684 ttattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 41122 - 41281
Alignment:
Q  1 aataaaatctcagtctggccgaaaatcatgggatggtgtgtgttatgtannnnnnnn-atgaaaggttaataaatgagactgagatctaaggatagttat 99  Q
    ||||||||||||| ||||||| |||||||||| ||||| ||||||||||         ||||||| ||||||||||||||||| |||||| | |  ||||    
T  41122 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 41221  T
Q  100 tgtgtcatgtcattcttgaatctttcttgataaaatcattcttgagatttagcattttcca 160  Q
    |||  ||| ||||||||| ||||||||| |||||||||||||||| || ||||||||||||    
T  41222 tgtaccatatcattcttggatctttctt-ataaaatcattcttgatatctagcattttcca 41281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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