View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10865A_low_385 (Length: 228)
Name: NF10865A_low_385
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_low_385 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 7176815 - 7176594
Alignment:
| Q |
1 |
tattaccaagcaaatacaacctatgtttttcaaaacacagacacttattttatagttgctaacaacacttttgaaggactttcaacatgtcaagctttga |
100 |
Q |
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| T |
7176815 |
tattatcaagcaaatacatcctatgtttttcaaaacacagacacttattttatagttgctaacaacacttttgaaggactttcaacatgtcaagctttga |
7176716 |
T |
|
| Q |
101 |
tgcatgaaaatcataatcctggtgatgtatatcctggtagaaaactactcgttcctcttagatgtgcttgtcccacaaagaatcaaactcagaaaaacat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
7176715 |
tgcatgaaaatcataatcctggtgatgtatatcctggtagaaaactacttgttcctcttagatgtgcttgtcctacaaagaatcaaactcagaaaaacat |
7176616 |
T |
|
| Q |
201 |
aaagtatcttttgagttatttg |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
7176615 |
aaagtatcttttgagttatttg |
7176594 |
T |
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