View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10865A_low_389 (Length: 227)

Name: NF10865A_low_389
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10865A_low_389
NF10865A_low_389
[»] chr4 (66 HSPs)
chr4 (1-221)||(821196-821414)
chr4 (1-220)||(44054778-44054997)
chr4 (1-220)||(45460040-45460258)
chr4 (1-220)||(33739121-33739339)
chr4 (6-220)||(15273736-15273949)
chr4 (1-210)||(25120215-25120424)
chr4 (1-150)||(5683906-5684055)
chr4 (1-220)||(16521644-16521863)
chr4 (6-150)||(18247155-18247299)
chr4 (1-220)||(44345684-44345902)
chr4 (1-215)||(21960657-21960870)
chr4 (5-220)||(12900853-12901070)
chr4 (1-220)||(30233626-30233845)
chr4 (14-165)||(7133479-7133631)
chr4 (5-152)||(9294491-9294638)
chr4 (7-220)||(19698447-19698657)
chr4 (7-220)||(19709032-19709242)
chr4 (6-154)||(26679002-26679152)
chr4 (5-115)||(15212413-15212523)
chr4 (14-150)||(18167766-18167903)
chr4 (1-215)||(23271015-23271226)
chr4 (1-220)||(54119356-54119574)
chr4 (6-154)||(22355604-22355754)
chr4 (15-215)||(55377673-55377873)
chr4 (1-103)||(10643043-10643145)
chr4 (1-220)||(18294100-18294321)
chr4 (1-150)||(14995051-14995202)
chr4 (1-142)||(13245306-13245447)
chr4 (19-146)||(18251103-18251232)
chr4 (74-212)||(53705902-53706039)
chr4 (6-115)||(15212311-15212419)
chr4 (6-98)||(15288106-15288198)
chr4 (6-98)||(15295216-15295308)
chr4 (1-165)||(19999381-19999547)
chr4 (76-220)||(8873631-8873774)
chr4 (86-199)||(19019506-19019617)
chr4 (1-103)||(18495604-18495708)
chr4 (74-142)||(53908963-53909031)
chr4 (83-211)||(13810709-13810838)
chr4 (77-154)||(10487603-10487682)
chr4 (77-154)||(16329069-16329148)
chr4 (61-115)||(15212557-15212611)
chr4 (1-41)||(7133711-7133751)
chr4 (1-41)||(8373209-8373249)
chr4 (1-41)||(14950874-14950914)
chr4 (1-41)||(18167646-18167686)
chr4 (5-51)||(8373321-8373367)
chr4 (77-142)||(110391-110456)
chr4 (1-41)||(9294379-9294419)
chr4 (1-41)||(34394053-34394093)
chr4 (1-36)||(110336-110371)
chr4 (1-51)||(5684153-5684204)
chr4 (1-51)||(18294418-18294469)
chr4 (1-39)||(8044115-8044153)
chr4 (82-165)||(18109838-18109923)
chr4 (1-103)||(18247042-18247146)
chr4 (1-39)||(34393910-34393948)
chr4 (1-39)||(53706054-53706092)
chr4 (1-42)||(15212198-15212239)
chr4 (1-42)||(15274021-15274062)
chr4 (1-42)||(15288271-15288312)
chr4 (1-42)||(15295381-15295422)
chr4 (1-41)||(22355826-22355866)
chr4 (5-33)||(15212605-15212633)
chr4 (1-41)||(26678889-26678929)
chr4 (1-33)||(47356182-47356214)
[»] chr1 (39 HSPs)
chr1 (1-218)||(22407286-22407503)
chr1 (1-215)||(49966504-49966717)
chr1 (1-213)||(18506211-18506422)
chr1 (6-220)||(20826206-20826419)
chr1 (1-213)||(35053695-35053909)
chr1 (1-186)||(44036024-44036208)
chr1 (1-215)||(2422065-2422279)
chr1 (1-215)||(21717058-21717271)
chr1 (1-150)||(15862592-15862741)
chr1 (5-150)||(22353134-22353279)
chr1 (1-220)||(5675690-5675909)
chr1 (1-220)||(27330861-27331078)
chr1 (1-220)||(41210901-41211119)
chr1 (1-220)||(35523508-35523729)
chr1 (1-150)||(22250113-22250261)
chr1 (7-133)||(41218316-41218442)
chr1 (1-220)||(51657400-51657622)
chr1 (1-165)||(17147635-17147801)
chr1 (5-152)||(20956127-20956278)
chr1 (1-105)||(21858411-21858515)
chr1 (1-220)||(9785340-9785549)
chr1 (1-106)||(45050537-45050642)
chr1 (12-116)||(20894886-20894991)
chr1 (74-142)||(37845654-37845722)
chr1 (77-154)||(51451544-51451623)
chr1 (1-146)||(22365610-22365757)
chr1 (1-38)||(20526973-20527010)
chr1 (72-142)||(20930380-20930450)
chr1 (1-38)||(20444601-20444638)
chr1 (1-38)||(20530366-20530403)
chr1 (1-42)||(20826491-20826532)
chr1 (1-38)||(37845737-37845774)
chr1 (1-42)||(41393305-41393346)
chr1 (74-142)||(20444653-20444721)
chr1 (74-142)||(20527025-20527092)
chr1 (74-142)||(20530418-20530486)
chr1 (1-101)||(7641803-7641903)
chr1 (1-33)||(18060885-18060917)
chr1 (1-33)||(22352983-22353015)
[»] chr8 (65 HSPs)
chr8 (4-215)||(25121403-25121614)
chr8 (1-212)||(22322525-22322736)
chr8 (1-210)||(29759149-29759358)
chr8 (1-220)||(19994234-19994452)
chr8 (1-220)||(20480527-20480748)
chr8 (1-220)||(37610225-37610443)
chr8 (1-142)||(41245521-41245662)
chr8 (6-152)||(24107629-24107775)
chr8 (6-146)||(28836562-28836704)
chr8 (7-220)||(18611377-18611587)
chr8 (1-147)||(21680061-21680209)
chr8 (6-145)||(22908532-22908673)
chr8 (1-198)||(20648541-20648740)
chr8 (1-165)||(24386843-24387010)
chr8 (7-146)||(24930160-24930302)
chr8 (1-150)||(22007638-22007786)
chr8 (1-165)||(20655158-20655325)
chr8 (1-220)||(21696420-21696639)
chr8 (1-147)||(16417119-16417266)
chr8 (1-103)||(43374782-43374884)
chr8 (1-154)||(13663635-13663790)
chr8 (1-154)||(24718564-24718718)
chr8 (1-150)||(13722174-13722325)
chr8 (1-165)||(16874074-16874240)
chr8 (1-212)||(20568356-20568567)
chr8 (1-212)||(20574549-20574760)
chr8 (1-220)||(3432661-3432877)
chr8 (1-150)||(17730612-17730765)
chr8 (1-165)||(38532517-38532685)
chr8 (6-99)||(6775326-6775420)
chr8 (30-152)||(28556874-28556998)
chr8 (6-220)||(16040335-16040549)
chr8 (1-215)||(16042123-16042337)
chr8 (1-106)||(24548076-24548181)
chr8 (73-220)||(16406149-16406295)
chr8 (77-154)||(5237128-5237207)
chr8 (77-154)||(24662391-24662470)
chr8 (5-51)||(17151399-17151445)
chr8 (1-100)||(270587-270687)
chr8 (1-100)||(645233-645333)
chr8 (1-100)||(830968-831068)
chr8 (1-41)||(13722433-13722473)
chr8 (1-41)||(13722581-13722621)
chr8 (1-41)||(13722729-13722769)
chr8 (1-41)||(13722877-13722917)
chr8 (1-41)||(13723025-13723065)
chr8 (1-41)||(24107848-24107888)
chr8 (1-41)||(24930375-24930415)
chr8 (74-143)||(16194917-16194986)
chr8 (1-38)||(16195001-16195038)
chr8 (1-41)||(16040621-16040661)
chr8 (1-37)||(17151521-17151557)
chr8 (7-41)||(18618028-18618062)
chr8 (66-182)||(22144136-22144250)
chr8 (1-42)||(6775492-6775533)
chr8 (1-42)||(22908745-22908786)
chr8 (1-42)||(28836449-28836490)
chr8 (1-33)||(224430-224462)
chr8 (1-33)||(700843-700875)
chr8 (1-33)||(738053-738085)
chr8 (1-33)||(861948-861980)
chr8 (1-33)||(13663905-13663937)
chr8 (1-33)||(13723180-13723212)
chr8 (1-41)||(43684509-43684549)
chr8 (77-154)||(43684587-43684666)
[»] chr6 (55 HSPs)
chr6 (1-218)||(32897585-32897802)
chr6 (1-210)||(19984298-19984507)
chr6 (1-213)||(25645918-25646129)
chr6 (6-220)||(16230555-16230768)
chr6 (1-220)||(18776070-18776291)
chr6 (5-215)||(18824637-18824847)
chr6 (6-150)||(25174527-25174671)
chr6 (5-215)||(4989869-4990079)
chr6 (1-216)||(18431495-18431708)
chr6 (10-150)||(27655147-27655287)
chr6 (1-212)||(18569448-18569660)
chr6 (5-152)||(18840555-18840702)
chr6 (11-150)||(33315628-33315767)
chr6 (14-165)||(18004002-18004154)
chr6 (1-220)||(16105421-16105638)
chr6 (14-215)||(15736160-15736362)
chr6 (6-146)||(13622160-13622302)
chr6 (1-215)||(35016770-35016983)
chr6 (5-115)||(18824841-18824951)
chr6 (5-115)||(18840696-18840806)
chr6 (1-197)||(16084943-16085136)
chr6 (1-213)||(25745422-25745634)
chr6 (6-198)||(16826872-16827065)
chr6 (6-220)||(18582151-18582367)
chr6 (1-212)||(22431110-22431320)
chr6 (14-146)||(14627658-14627791)
chr6 (1-198)||(23152121-23152318)
chr6 (1-165)||(18087846-18088014)
chr6 (7-198)||(19628302-19628490)
chr6 (1-99)||(1658915-1659013)
chr6 (6-98)||(19609350-19609442)
chr6 (1-165)||(23976429-23976595)
chr6 (61-165)||(26088787-26088893)
chr6 (5-220)||(25368428-25368646)
chr6 (1-106)||(1651148-1651253)
chr6 (9-147)||(22867026-22867166)
chr6 (21-99)||(21776791-21776870)
chr6 (54-192)||(18397842-18397982)
chr6 (100-198)||(13015910-13016006)
chr6 (92-150)||(25903975-25904033)
chr6 (1-41)||(16827138-16827178)
chr6 (7-152)||(28195924-28196074)
chr6 (15-85)||(16301107-16301178)
chr6 (1-41)||(4989757-4989797)
chr6 (1-80)||(13016008-13016088)
chr6 (5-41)||(18825023-18825059)
chr6 (1-44)||(15736440-15736483)
chr6 (1-36)||(16239227-16239262)
chr6 (7-41)||(18843083-18843117)
chr6 (1-42)||(14627871-14627912)
chr6 (7-51)||(15861597-15861642)
chr6 (1-42)||(16230442-16230483)
chr6 (1-42)||(18004234-18004275)
chr6 (1-42)||(25174414-25174455)
chr6 (1-42)||(27655348-27655389)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-217)||(71539-71755)
[»] scaffold0011 (6 HSPs)
scaffold0011 (1-212)||(256001-256211)
scaffold0011 (1-212)||(262607-262817)
scaffold0011 (5-142)||(124454-124591)
scaffold0011 (5-142)||(75855-75992)
scaffold0011 (75-142)||(193515-193582)
scaffold0011 (1-39)||(193470-193508)
[»] scaffold0480 (1 HSPs)
scaffold0480 (1-212)||(6453-6663)
[»] chr7 (62 HSPs)
chr7 (1-216)||(44864102-44864316)
chr7 (1-220)||(12753740-12753958)
chr7 (1-208)||(125685-125892)
chr7 (1-220)||(3893952-3894173)
chr7 (1-220)||(47288634-47288852)
chr7 (6-220)||(14252277-14252491)
chr7 (1-150)||(15851185-15851334)
chr7 (1-218)||(12544801-12545017)
chr7 (1-220)||(369746-369965)
chr7 (1-175)||(11286072-11286247)
chr7 (1-198)||(15823514-15823711)
chr7 (6-150)||(16417436-16417580)
chr7 (1-218)||(45453346-45453561)
chr7 (3-220)||(112381-112600)
chr7 (1-175)||(26071396-26071571)
chr7 (1-175)||(26095183-26095358)
chr7 (1-220)||(142487-142708)
chr7 (6-220)||(32495532-32495747)
chr7 (14-150)||(15952144-15952280)
chr7 (6-154)||(13912155-13912305)
chr7 (6-145)||(7291825-7291966)
chr7 (1-215)||(13867163-13867379)
chr7 (5-150)||(11515198-11515345)
chr7 (6-220)||(2027529-2027742)
chr7 (5-152)||(7285361-7285510)
chr7 (1-152)||(12249263-12249417)
chr7 (1-103)||(36051522-36051624)
chr7 (1-165)||(18981044-18981212)
chr7 (1-212)||(39047785-39047996)
chr7 (1-165)||(13757437-13757603)
chr7 (1-220)||(13273612-13273833)
chr7 (1-152)||(49048942-49049097)
chr7 (1-220)||(15629640-15629860)
chr7 (1-147)||(16571246-16571394)
chr7 (1-147)||(16594268-16594416)
chr7 (1-105)||(1937973-1938076)
chr7 (16-115)||(7285504-7285603)
chr7 (5-220)||(10861927-10862144)
chr7 (14-99)||(16480034-16480120)
chr7 (74-142)||(11582027-11582095)
chr7 (77-154)||(15442707-15442786)
chr7 (77-154)||(30263272-30263351)
chr7 (5-51)||(11515092-11515138)
chr7 (74-142)||(16210691-16210759)
chr7 (1-41)||(32495819-32495859)
chr7 (102-165)||(3048688-3048751)
chr7 (82-133)||(13038299-13038350)
chr7 (1-39)||(11582109-11582147)
chr7 (1-39)||(13038373-13038411)
chr7 (82-165)||(2191684-2191769)
chr7 (1-39)||(16210638-16210676)
chr7 (1-42)||(7291712-7291753)
chr7 (1-42)||(15952360-15952401)
chr7 (1-42)||(16417323-16417364)
chr7 (1-42)||(16480200-16480241)
chr7 (1-42)||(26010455-26010496)
chr7 (82-142)||(3058966-3059026)
chr7 (112-220)||(35093783-35093890)
chr7 (5-36)||(3058910-3058941)
chr7 (1-39)||(15926223-15926261)
chr7 (1-42)||(2027416-2027457)
chr7 (1-41)||(13912378-13912418)
[»] scaffold0037 (3 HSPs)
scaffold0037 (1-220)||(25809-26028)
scaffold0037 (1-215)||(70486-70700)
scaffold0037 (7-147)||(93560-93701)
[»] chr5 (58 HSPs)
chr5 (1-220)||(21393047-21393265)
chr5 (6-220)||(9731762-9731975)
chr5 (1-212)||(28258460-28258669)
chr5 (1-215)||(1169602-1169815)
chr5 (13-198)||(23510859-23511044)
chr5 (5-150)||(10779344-10779489)
chr5 (6-150)||(11318-11462)
chr5 (1-150)||(16535164-16535313)
chr5 (1-220)||(20710995-20711214)
chr5 (6-150)||(29191785-29191929)
chr5 (1-220)||(17472823-17473042)
chr5 (6-215)||(11582846-11583055)
chr5 (1-220)||(4864126-4864343)
chr5 (5-152)||(110145-110292)
chr5 (1-220)||(24184295-24184515)
chr5 (6-154)||(1220890-1221040)
chr5 (6-154)||(4201124-4201274)
chr5 (6-198)||(27184830-27185023)
chr5 (1-147)||(19404440-19404588)
chr5 (1-218)||(21652485-21652704)
chr5 (6-215)||(23513767-23513977)
chr5 (6-150)||(18779155-18779301)
chr5 (2-165)||(21649689-21649855)
chr5 (6-146)||(25425589-25425732)
chr5 (4-145)||(11338021-11338165)
chr5 (6-150)||(22367647-22367793)
chr5 (5-150)||(11341605-11341749)
chr5 (1-150)||(22884454-22884602)
chr5 (1-220)||(23453810-23454032)
chr5 (1-220)||(23465315-23465537)
chr5 (5-150)||(25901488-25901635)
chr5 (6-98)||(7424648-7424740)
chr5 (9-99)||(19498764-19498855)
chr5 (1-220)||(24474445-24474654)
chr5 (77-154)||(21234670-21234749)
chr5 (77-215)||(23505663-23505802)
chr5 (77-154)||(20615547-20615626)
chr5 (1-41)||(110364-110404)
chr5 (1-41)||(1169923-1169963)
chr5 (1-103)||(11341493-11341597)
chr5 (1-41)||(27185095-27185135)
chr5 (77-154)||(37051919-37051998)
chr5 (82-146)||(35792275-35792341)
chr5 (1-42)||(11205-11246)
chr5 (1-42)||(1221112-1221153)
chr5 (1-42)||(7424534-7424575)
chr5 (1-42)||(9732047-9732088)
chr5 (1-42)||(10779560-10779601)
chr5 (1-42)||(11582733-11582774)
chr5 (1-42)||(18779374-18779415)
chr5 (1-42)||(22367865-22367906)
chr5 (1-42)||(25425476-25425517)
chr5 (1-39)||(11212986-11213024)
chr5 (1-39)||(23513655-23513693)
chr5 (1-39)||(29192004-29192042)
chr5 (1-42)||(21074870-21074911)
chr5 (1-41)||(4201347-4201387)
chr5 (1-29)||(25192390-25192418)
[»] chr3 (67 HSPs)
chr3 (1-219)||(16183094-16183311)
chr3 (6-220)||(18909656-18909869)
chr3 (6-220)||(53769627-53769840)
chr3 (1-220)||(50113218-50113434)
chr3 (1-220)||(6147927-6148143)
chr3 (6-150)||(22274011-22274155)
chr3 (1-215)||(22145362-22145576)
chr3 (6-150)||(2450374-2450518)
chr3 (13-220)||(13837733-13837938)
chr3 (1-220)||(17099571-17099789)
chr3 (1-220)||(318695-318915)
chr3 (10-154)||(17957375-17957520)
chr3 (3-143)||(47786041-47786183)
chr3 (1-212)||(12350934-12351146)
chr3 (5-150)||(49231180-49231326)
chr3 (14-150)||(16819882-16820019)
chr3 (1-220)||(15469552-15469770)
chr3 (2-165)||(23491363-23491530)
chr3 (1-152)||(11062184-11062338)
chr3 (1-220)||(35122543-35122763)
chr3 (6-220)||(7852777-7852993)
chr3 (1-142)||(13816369-13816511)
chr3 (5-218)||(53899605-53899820)
chr3 (5-198)||(51159475-51159669)
chr3 (70-215)||(54423001-54423145)
chr3 (1-219)||(11198653-11198873)
chr3 (1-215)||(12562563-12562779)
chr3 (1-142)||(19571932-19572073)
chr3 (1-220)||(14297355-14297574)
chr3 (1-220)||(14302982-14303201)
chr3 (4-220)||(8630706-8630920)
chr3 (1-139)||(17937353-17937492)
chr3 (1-142)||(15860308-15860449)
chr3 (1-147)||(40938588-40938736)
chr3 (1-147)||(14294286-14294434)
chr3 (1-147)||(14299913-14300061)
chr3 (1-150)||(25057703-25057856)
chr3 (6-142)||(33340812-33340949)
chr3 (11-220)||(17138342-17138553)
chr3 (82-220)||(17523552-17523690)
chr3 (1-106)||(15574897-15575002)
chr3 (1-106)||(15613916-15614021)
chr3 (1-215)||(19945483-19945700)
chr3 (102-165)||(38167007-38167070)
chr3 (74-143)||(12031164-12031233)
chr3 (1-42)||(33340699-33340740)
chr3 (1-41)||(16819762-16819802)
chr3 (5-152)||(39654774-39654925)
chr3 (1-39)||(51159742-51159780)
chr3 (74-143)||(2048969-2049038)
chr3 (107-220)||(16260149-16260261)
chr3 (1-37)||(2048917-2048953)
chr3 (74-142)||(19230968-19231036)
chr3 (52-103)||(14522487-14522538)
chr3 (15-103)||(10737388-10737476)
chr3 (4-38)||(19230919-19230953)
chr3 (1-42)||(2450590-2450631)
chr3 (1-42)||(18909543-18909584)
chr3 (1-42)||(22273898-22273939)
chr3 (1-42)||(53769514-53769555)
chr3 (1-37)||(12031249-12031285)
chr3 (1-42)||(7852664-7852705)
chr3 (1-42)||(17957596-17957637)
chr3 (1-33)||(8269673-8269705)
chr3 (1-33)||(8276784-8276816)
chr3 (5-41)||(11883518-11883554)
chr3 (1-33)||(44228283-44228315)
[»] chr2 (50 HSPs)
chr2 (6-220)||(21275503-21275716)
chr2 (1-210)||(22273742-22273951)
chr2 (1-210)||(22282975-22283184)
chr2 (6-220)||(12643001-12643214)
chr2 (6-220)||(42179342-42179555)
chr2 (6-150)||(19887825-19887969)
chr2 (1-220)||(36891794-36892013)
chr2 (6-150)||(21140843-21140987)
chr2 (6-165)||(3800036-3800195)
chr2 (1-175)||(27260418-27260592)
chr2 (1-212)||(6878300-6878513)
chr2 (3-139)||(16900224-16900361)
chr2 (3-139)||(16993615-16993752)
chr2 (1-220)||(4449312-4449533)
chr2 (30-152)||(25211866-25211988)
chr2 (1-212)||(8942503-8942715)
chr2 (1-212)||(12637255-12637467)
chr2 (25-215)||(270035-270226)
chr2 (1-139)||(22581094-22581235)
chr2 (5-150)||(34823165-34823309)
chr2 (5-150)||(12727126-12727270)
chr2 (1-220)||(28972897-28973118)
chr2 (1-103)||(8886997-8887099)
chr2 (1-165)||(24572526-24572693)
chr2 (1-165)||(9653983-9654138)
chr2 (75-142)||(20628580-20628647)
chr2 (1-103)||(7320346-7320450)
chr2 (77-154)||(14907583-14907662)
chr2 (77-154)||(23819112-23819191)
chr2 (5-103)||(22862348-22862446)
chr2 (1-43)||(25877210-25877252)
chr2 (1-154)||(20013977-20014131)
chr2 (1-41)||(25600818-25600858)
chr2 (74-142)||(461646-461714)
chr2 (1-41)||(24827831-24827871)
chr2 (1-101)||(12726908-12727010)
chr2 (1-103)||(19887978-19888082)
chr2 (1-39)||(20628662-20628700)
chr2 (6-51)||(3800257-3800302)
chr2 (1-42)||(12643286-12643327)
chr2 (1-42)||(21140730-21140771)
chr2 (1-42)||(21275788-21275829)
chr2 (4-80)||(22691175-22691252)
chr2 (4-80)||(22695822-22695899)
chr2 (3-36)||(43644243-43644276)
chr2 (5-220)||(22787108-22787325)
chr2 (1-41)||(34823053-34823093)
chr2 (74-142)||(43644158-43644226)
chr2 (5-68)||(721343-721407)
chr2 (1-41)||(5889559-5889599)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-175)||(7652-7827)
[»] scaffold0251 (2 HSPs)
scaffold0251 (6-220)||(14842-15055)
scaffold0251 (1-42)||(15127-15168)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-210)||(32287-32495)
[»] scaffold0078 (3 HSPs)
scaffold0078 (1-210)||(40349-40557)
scaffold0078 (6-154)||(38372-38522)
scaffold0078 (1-42)||(38594-38635)
[»] scaffold0021 (3 HSPs)
scaffold0021 (1-220)||(137897-138115)
scaffold0021 (1-220)||(87297-87504)
scaffold0021 (1-215)||(10524-10740)
[»] scaffold0673 (1 HSPs)
scaffold0673 (1-220)||(1925-2143)
[»] scaffold0359 (2 HSPs)
scaffold0359 (1-220)||(12826-13044)
scaffold0359 (1-220)||(183-400)
[»] scaffold0383 (3 HSPs)
scaffold0383 (1-150)||(1369-1518)
scaffold0383 (1-213)||(6089-6303)
scaffold0383 (1-41)||(1222-1262)
[»] scaffold0447 (2 HSPs)
scaffold0447 (1-213)||(3481-3695)
scaffold0447 (159-213)||(8256-8309)
[»] scaffold0346 (1 HSPs)
scaffold0346 (1-171)||(2925-3096)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-191)||(6405-6594)
[»] scaffold0034 (4 HSPs)
scaffold0034 (5-220)||(39178-39392)
scaffold0034 (5-220)||(44661-44875)
scaffold0034 (1-115)||(39070-39184)
scaffold0034 (5-146)||(78414-78558)
[»] scaffold0068 (2 HSPs)
scaffold0068 (1-218)||(46984-47201)
scaffold0068 (1-218)||(60432-60649)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-154)||(20446-20599)
[»] scaffold0028 (4 HSPs)
scaffold0028 (5-220)||(129353-129568)
scaffold0028 (6-142)||(89938-90075)
scaffold0028 (1-41)||(129241-129281)
scaffold0028 (1-42)||(90147-90188)
[»] scaffold0003 (4 HSPs)
scaffold0003 (6-150)||(6148-6292)
scaffold0003 (74-142)||(216932-217000)
scaffold0003 (1-42)||(6035-6076)
scaffold0003 (1-37)||(217016-217052)
[»] scaffold0396 (1 HSPs)
scaffold0396 (1-215)||(13283-13497)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-220)||(95327-95545)
scaffold0044 (1-41)||(95179-95219)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-220)||(237040-237261)
scaffold0009 (1-41)||(270980-271020)
[»] scaffold0023 (2 HSPs)
scaffold0023 (6-150)||(155402-155546)
scaffold0023 (1-42)||(155618-155659)
[»] scaffold0303 (1 HSPs)
scaffold0303 (6-165)||(1507-1666)
[»] scaffold0025 (3 HSPs)
scaffold0025 (4-220)||(145538-145757)
scaffold0025 (1-51)||(145388-145438)
scaffold0025 (72-143)||(147698-147769)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-220)||(13057-13275)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-175)||(3518-3692)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-215)||(28890-29104)
scaffold0116 (1-39)||(28742-28780)
[»] scaffold0091 (1 HSPs)
scaffold0091 (1-212)||(43051-43261)
[»] scaffold0597 (2 HSPs)
scaffold0597 (10-165)||(2162-2319)
scaffold0597 (1-41)||(2395-2435)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-211)||(113652-113861)
scaffold0022 (8-220)||(108526-108739)
[»] scaffold0234 (2 HSPs)
scaffold0234 (1-220)||(18510-18734)
scaffold0234 (1-51)||(18831-18881)
[»] scaffold0244 (2 HSPs)
scaffold0244 (7-219)||(17485-17697)
scaffold0244 (7-220)||(23903-24116)
[»] scaffold0195 (4 HSPs)
scaffold0195 (1-176)||(7781-7957)
scaffold0195 (1-176)||(13170-13346)
scaffold0195 (1-103)||(20249-20351)
scaffold0195 (1-103)||(18165-18267)
[»] scaffold0018 (2 HSPs)
scaffold0018 (1-220)||(52361-52578)
scaffold0018 (1-220)||(56313-56530)
[»] scaffold0269 (3 HSPs)
scaffold0269 (6-146)||(935-1077)
scaffold0269 (6-146)||(15191-15333)
scaffold0269 (111-220)||(12021-12129)
[»] scaffold1734 (2 HSPs)
scaffold1734 (1-146)||(197-345)
scaffold1734 (1-39)||(48-86)
[»] scaffold0158 (1 HSPs)
scaffold0158 (1-199)||(23931-24128)
[»] scaffold0315 (2 HSPs)
scaffold0315 (6-150)||(17618-17764)
scaffold0315 (1-41)||(17505-17545)
[»] scaffold0554 (1 HSPs)
scaffold0554 (1-217)||(767-984)
[»] scaffold0032 (3 HSPs)
scaffold0032 (1-165)||(54488-54653)
scaffold0032 (1-42)||(109344-109385)
scaffold0032 (93-146)||(14590-14645)
[»] scaffold0761 (2 HSPs)
scaffold0761 (6-146)||(2740-2882)
scaffold0761 (1-37)||(2958-2994)
[»] scaffold0407 (1 HSPs)
scaffold0407 (1-142)||(5770-5913)
[»] scaffold0213 (1 HSPs)
scaffold0213 (1-150)||(27880-28028)
[»] scaffold0465 (1 HSPs)
scaffold0465 (1-165)||(11062-11229)
[»] scaffold0622 (1 HSPs)
scaffold0622 (1-133)||(8291-8424)
[»] scaffold0120 (2 HSPs)
scaffold0120 (72-220)||(18263-18410)
scaffold0120 (1-81)||(30046-30127)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-220)||(145784-146005)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-201)||(21517-21696)
scaffold0008 (72-133)||(129390-129451)
[»] scaffold0310 (1 HSPs)
scaffold0310 (6-103)||(1575-1672)
[»] scaffold0808 (1 HSPs)
scaffold0808 (1-220)||(2540-2761)
[»] scaffold0138 (5 HSPs)
scaffold0138 (13-220)||(14350-14556)
scaffold0138 (1-39)||(28356-28394)
scaffold0138 (1-39)||(40352-40390)
scaffold0138 (1-41)||(28505-28545)
scaffold0138 (1-41)||(40501-40541)
[»] scaffold0066 (2 HSPs)
scaffold0066 (86-220)||(53462-53593)
scaffold0066 (1-41)||(53163-53203)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-103)||(248741-248843)
[»] scaffold0589 (1 HSPs)
scaffold0589 (1-152)||(6751-6906)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-75)||(14538-14613)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-152)||(2287-2442)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-94)||(59581-59675)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-154)||(2723-2880)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-99)||(32441-32541)
[»] scaffold1140 (2 HSPs)
scaffold1140 (75-142)||(2085-2152)
scaffold1140 (1-39)||(2040-2078)
[»] scaffold0610 (1 HSPs)
scaffold0610 (109-176)||(1817-1884)
[»] scaffold0692 (1 HSPs)
scaffold0692 (1-212)||(505-698)
[»] scaffold0132 (2 HSPs)
scaffold0132 (6-66)||(41677-41737)
scaffold0132 (1-41)||(41565-41605)
[»] scaffold1753 (1 HSPs)
scaffold1753 (1-146)||(319-467)
[»] scaffold0750 (1 HSPs)
scaffold0750 (109-214)||(5515-5619)
[»] scaffold0498 (1 HSPs)
scaffold0498 (72-142)||(7890-7960)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-39)||(6415-6453)
scaffold0218 (74-142)||(6332-6400)
[»] scaffold0106 (1 HSPs)
scaffold0106 (74-131)||(40502-40559)
[»] scaffold0141 (2 HSPs)
scaffold0141 (77-154)||(21581-21660)
scaffold0141 (77-154)||(25836-25915)
[»] scaffold0302 (1 HSPs)
scaffold0302 (1-36)||(4699-4734)
[»] scaffold0004 (1 HSPs)
scaffold0004 (91-146)||(330964-331021)
[»] scaffold1404 (1 HSPs)
scaffold1404 (1-34)||(413-446)
[»] scaffold0266 (1 HSPs)
scaffold0266 (72-133)||(4788-4849)
[»] scaffold0215 (1 HSPs)
scaffold0215 (1-42)||(17353-17394)
[»] scaffold0162 (2 HSPs)
scaffold0162 (74-142)||(27696-27763)
scaffold0162 (1-36)||(27781-27816)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-39)||(34428-34466)


Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 821414 - 821196
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  821414 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattccttacattctaagtaagatagcatacacatttcatgataaacatcatatc 821315  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  821314 caatacaatcattcattcatacaacttcacttggtcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgacc--aaac 821217  T
Q  201 cgtatcaagtggcaaccggcg 221  Q
    |||||||||||||||| ||||    
T  821216 cgtatcaagtggcaactggcg 821196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 44054778 - 44054997
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||| |||  |||||| ||||||||||||||||||| || || ||||||||||||||||    
T  44054778 aatgtcattcaacatcaactattacatttagcttcaccattcaagcatttcttacattctaagtaagatagcatacatatctcgtgataaacatcatatc 44054877  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44054878 caatacaatcattcattcatataacttcacttagtcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 44054977  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    ||||||||||||||||||||    
T  44054978 cgtatcaagtggcaaccggc 44054997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 45460258 - 45460040
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||||| |||||||||||| ||||||||  |||||||||||||||||||    
T  45460258 aatgtcattcaacattaactatctcatatagtttcaccattcaagcattccttacattctaagtaagataacatacacacctcatgataaacatcatatc 45460159  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||||| ||||||| |||||||||  ||||| |||||| ||||||||||||||||||||    
T  45460158 caatacaatcatttaatcatacaacttcacttagtcatataagaatagtcacaacaattcataagacaattggctcaag-aaacatttccgaccaaaaac 45460060  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    | ||||||||||| ||||||    
T  45460059 catatcaagtggccaccggc 45460040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 33739121 - 33739339
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  33739121 aatgtcattcaacatcaactatcacatatagcttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatc 33739220  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||||||||| | |||||| |||  |||| || |||| |||   |||||  ||||| ||| ||||||||||||||||    
T  33739221 caatacaatcattcattcatacaacttcacttagttatataaaaatggtcaccacaattcttaatacaattggttcaag-aaatatttccgaccaaaaac 33739319  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    ||| ||||||||||| ||||    
T  33739320 cgtgtcaagtggcaaacggc 33739339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 15273949 - 15273736
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  |||||| || ||||||||||||||||||||||||    
T  15273949 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatcacatacatatctcatgataaacatcatatccaata 15273850  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| ||||| |    
T  15273849 caatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaagaccgtgt 15273751  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  15273750 caagtggcaaacggc 15273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 25120424 - 25120215
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  25120424 aatgtcattcaacatcaactatcacatttagtttcaccaattcaaacattccttacattcta-gtaagatagcatacacatctcatgataaacatcatat 25120326  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    ||| || |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||     
T  25120325 ccattataatcattcattcatacaaattcacttagtcatacaagaataatcacaaccattcataaggtaattgactcaataaaacatcgccgatcaaaac 25120226  T
Q  200 ccgtatcaagt 210  Q
    || ||||||||    
T  25120225 ccatatcaagt 25120215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 5684055 - 5683906
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  5684055 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatc 5683956  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  5683955 caatacaatcattcattcatacaacttcacttagtcatacaagaataatc 5683906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 16521644 - 16521863
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||| |||||||||||  |||||| || ||||||||||||||||||    
T  16521644 aatgtcattcaacatcaactatcacatatagtttcaccatttcaagcattccttacattctaagtaagatcacatacatatctcatgataaacatcatat 16521743  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| |    
T  16521744 ccaatacaatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaaga 16521842  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    |||| ||||||||||| ||||    
T  16521843 ccgtgtcaagtggcaaacggc 16521863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 18247155 - 18247299
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  18247155 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaata 18247254  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  18247255 caatcattcattcatacaacttcacttagtcatacaagaataatc 18247299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 44345684 - 44345902
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||| ||||||    
T  44345684 aatgtcattcaacatcaactatcacatatagtttcaacattcaagcattctttacattctaagtaagatagcatacacatctcatgatacacaacatatc 44345783  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||| ||||||||||||||||||||||||||||| | ||||||  ||| |||| || |||| ||||  |||||  ||||| |||| ||| |||||||||||    
T  44345784 caaaacaatcattcattcatacaacttcacttagttatataaacatagtcaccacaattcttaagacaattggttcaag-aaacgttttcgaccaaaaac 44345882  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    | ||||||| ||| ||||||    
T  44345883 catatcaaggggccaccggc 44345902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21960870 - 21960657
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||||  ||||| ||||||||| |||||||||||| ||| |||||||||| ||||    
T  21960870 aatgtcatttaacatcaactattacatatagtttcaccattcaagcattccatacattctaagtaaggtagcatacacatctcaagataaacatcgtatc 21960771  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| |||  |    ||| |||  ||||| |||||| ||||||||||||||||||||    
T  21960770 caatacaatcattcattcatacaacttcacttagtcatataaaaatagtcatgatagatcacaagacaattggctcaag-aaacatttccgaccaaaaac 21960672  T
Q  201 cgtatcaagtggcaa 215  Q
    | | |||||||||||    
T  21960671 catgtcaagtggcaa 21960657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 12901070 - 12900853
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc-- 101  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||||||| |||| ||||||||||||||||||||      
T  12901070 tcattaaacatcaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaagatagcatatacatctcatgataaacatcatatccaa 12900971  T
Q  102 aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaacc 201  Q
    |||||||||||||||| ||||||||||| ||| ||||| | ||||  ||||||| | |||||||  ||||  |||||| |||||||||||||||||| ||    
T  12900970 aatacaatcattcatttatacaacttcaattagtcatacatgaatggtcacaacaaatcataagacaatttgctcaag-aaacatttccgaccaaaatcc 12900872  T
Q  202 gtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||    
T  12900871 gtgtcaagtggcaaacggc 12900853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 30233845 - 30233626
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| ||||||||||| ||||| |||| |||  |||||| ||||  ||||||||||||||||  |||||||||||||||||    
T  30233845 aatgtcattcaacattaactatctcatatagtttcgccatttcaagcatttcttacattctaatcaagatagcatacacatcacatgataaacatcatat 30233746  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgac-tcaagaaaacatttccgaccaaaa 198  Q
    ||||||||||||||||||||||||| || ||||| |||||||||| ||| |||||| |||||||||||||||||| | ||  || ||||||||||  ||     
T  30233745 ccaatacaatcattcattcatacaaatttacttagtcatataagagtaaccacaacaattcataaggtaattgacttgaaagaaccatttccgac--aat 30233648  T
Q  199 accgtatcaagtggcaaccggc 220  Q
    ||||||||||||||||| ||||    
T  30233647 accgtatcaagtggcaaacggc 30233626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 7133631 - 7133479
Alignment:
Q  14 atcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatccaatacaatcat 112  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  7133631 atcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacaacatctcatgataaacatcatatccaatacaatcat 7133532  T
Q  113 tcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||||||||||||||||||||  |||||||||||| |||| || |||| ||||    
T  7133531 tcattcatacaacttcacttagccatataagaatagtcaccacaattcgtaag 7133479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 9294491 - 9294638
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||| || |||||||||||||||||||||||    
T  9294491 tcattcaacatcaattatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacatatctcatgataaacatcatatccaat 9294590  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    ||||||||||||||| ||| ||||||||| ||||||||| ||| ||||    
T  9294591 acaatcattcattcacacatcttcacttagtcatataaggatagtcac 9294638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 220
Target Start/End: Complemental strand, 19698657 - 19698447
Alignment:
Q  7 attcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  |||    
T  19698657 attcaacatcaactatcacatatagtttcaccattcaagtattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaat 19698558  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgta 204  Q
    | ||||| |||||    |||||||||||| ||||||||||||| |||| |  | |||||||  || |||||||| |||||||||||||| |||| ||  |    
T  19698557 ataatcactcatt----caacttcacttagtcatataagaatagtcaccataaatcataagacaaatgactcaa-aaaacatttccgacaaaaatccaaa 19698463  T
Q  205 tcaagtggcaaccggc 220  Q
    ||| ||||||| ||||    
T  19698462 tcatgtggcaaacggc 19698447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 220
Target Start/End: Complemental strand, 19709242 - 19709032
Alignment:
Q  7 attcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  |||    
T  19709242 attcaacatcaactatcacatatagtttcaccattcaagtattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaat 19709143  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgta 204  Q
    | ||||| |||||    |||||||||||| ||||||||||||| |||| |  | |||||||  || |||||||| |||||||||||||| |||| ||  |    
T  19709142 ataatcactcatt----caacttcacttagtcatataagaatagtcaccataaatcataagacaaatgactcaa-aaaacatttccgacaaaaatccaaa 19709048  T
Q  205 tcaagtggcaaccggc 220  Q
    ||| ||||||| ||||    
T  19709047 tcatgtggcaaacggc 19709032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 26679002 - 26679152
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  26679002 cattaaacatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 26679101  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  26679102 tataatcactcattcatacaacttcacttagtcatacaagaataatcacaa 26679152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 15212413 - 15212523
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||||| |||    
T  15212413 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatctaat 15212512  T
Q  105 acaatcattca 115  Q
    |||||||||||    
T  15212513 acaatcattca 15212523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 18167766 - 18167903
Alignment:
Q  14 atcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatccaatacaatcat 112  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||| ||| || |||||||||||||||||||||||||||     
T  18167766 atcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacaacatctcttgataaacatcatatccaatacaatcac 18167865  T
Q  113 tcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||  |||| ||||||||||    
T  18167866 tcattcatacaacttcacttagccatacaagaataatc 18167903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 23271226 - 23271015
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| || |||||||||||||||||||||||||||||||| |||| |||||  | || | ||||||||||||||||| || |||||| || ||||||||    
T  23271226 aatgttatccaacatcaactatcacatatagtttcaccatttcaagcattctc-atattccaagtaagatagcatacatatctcatgacaaccatcatat 23271128  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    ||||||| ||||| ||||||||||||||||||||  |||||||||||| |||| |  | |||||||  ||||||||||||  ||||||||||||| ||||    
T  23271127 ccaatacgatcatccattcatacaacttcacttagccatataagaatagtcacgataaatcataagacaattgactcaag--aacatttccgacc-aaaa 23271031  T
Q  200 ccgtatcaagtggcaa 215  Q
    || |||||||||||||    
T  23271030 ccatatcaagtggcaa 23271015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 54119574 - 54119356
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||| |||||||||||||||||||||||||||| |||||   ||||| |||| |||||||||||||| ||||||| ||| |||||| |||||||    
T  54119574 aatgtcattccacatcaactatcacatatagtttcaccaattcaacatttctt-acattctaagtaagatagcttacacatctcaagataaatatcatat 54119476  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||  |||| |  | ||| ||| |||||| |||||| ||| ||||||||| ||||     
T  54119475 ccaatacaatcattcattcatacaacttcacttagtcatacaagaatggtcaccataactcacaagataattggctcaag-aaatatttccgacaaaaat 54119377  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    ||  |||| ||||||| ||||    
T  54119376 ccaaatcatgtggcaaacggc 54119356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 22355754 - 22355604
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||| ||||||||||||||||||||||||||||||  ||| |||| |||||| |||||||||||| |||||| || || |||||||||||||||||  ||    
T  22355754 cattaaacatcaactatcacatatagtttcaccatctaagcattccttacattctaagtaagataacatacatatctcgtgataaacatcatatccaaaa 22355655  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    || ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  22355654 tataatcactcattcatacaacttcacttaatcatacaagaataatcacaa 22355604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 215
Target Start/End: Complemental strand, 55377873 - 55377673
Alignment:
Q  15 tcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaatcatt 113  Q
    ||||||||||| ||||||||||||| | |||| |||  |||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||    
T  55377873 tcaactatcacgtatagtttcaccaatacaagcatttcttacatcctaagtaagatagcatacttatctcatgataaacatcatattcaatacaatcatt 55377774  T
Q  114 cattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatcaagtggc 213  Q
    || |  |||||||||||||| ||||||||||||  ||||||  | ||| |||  |||||||| ||| ||||||||||||| |||| ||  |||| |||||    
T  55377773 caattttacaacttcacttagtcatataagaatggtcacaataactcacaagacaattgacttaag-aaacatttccgacaaaaatccaaatcatgtggc 55377675  T
Q  214 aa 215  Q
    ||    
T  55377674 aa 55377673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 10643043 - 10643145
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| |||| |||||| ||||||||||||||||||| || |||||||||||||||||||    
T  10643043 aatgttattcaacatcaactatcacatatagttccaccattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatc 10643142  T
Q  101 caa 103  Q
    |||    
T  10643143 caa 10643145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 18294321 - 18294100
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||| |||| |||||| | ||||||||||||||||| || ||||||||| ||||||||    
T  18294321 aatgtcattcaacatcaaatatcacatatagtttcacgatttcaagcattccttacattccaagtaagatagcatacatatctcatgataatcatcatat 18294222  T
Q  100 c--caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    |   |||| ||||| ||||||||||||||||||||| | ||| ||||||  ||||||  | ||| |||  ||||| || ||| ||||||||||||| |||    
T  18294221 caaaaatataatcactcattcatacaacttcacttagttatacaagaatggtcacaataactcacaagacaattggctaaag-aaacatttccgacaaaa 18294123  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
    | ||  |||| ||||||| ||||    
T  18294122 atccaaatcatgtggcaaacggc 18294100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 14995051 - 14995202
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||  | || | ||||||||  | | ||| ||| |||||||||| |||||||    
T  14995051 aatgttattcaacatcaactatcacatatagtttcaccattcaagcattctc-atattccaagtaagagggaaaacaacatctcatgataaatatcatat 14995149  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||  |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  14995150 ccaaaatacaatcattcattcatacaacttcacttagtcatacaagaataatc 14995202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13245306 - 13245447
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||| |||||||||||||||||||||||||||||||||| |||||   ||||| |||| |||||||||||| ||||||||| |||||||||| |||||||    
T  13245306 aatgacattcaacatcaactatcacatatagtttcaccaattcaacatttctt-acattctaagtaagataacatacacatctcatgataaatatcatat 13245404  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    |||| | |||||| ||||||||||  |||||||| | ||||||    
T  13245405 ccaaaataatcatccattcatacattttcacttagttatataa 13245447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 18251232 - 18251103
Alignment:
Q  19 ctatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aatacaatcattcat 116  Q
    |||||||||||| |||||| ||||||  |||| |||||| |||||||||||| |||||| || |||||||||||||||| |||  |||| ||||| ||||    
T  18251232 ctatcacatataatttcactattcaaacattccttacattctaagtaagataacatacatatctcatgataaacatcatttccaaaatataatcactcat 18251133  T
Q  117 tcatacaacttcacttaatcatataagaat 146  Q
    ||||||||||||||||| ||||| ||||||    
T  18251132 tcatacaacttcacttagtcatacaagaat 18251103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 53706039 - 53705902
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattga 173  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||  ||| |||| || |||| ||||  |||||     
T  53706039 tacacatctcatgataaacatcatatccaatataatcattcattcatacaacttcacttagttatataaacatagtcaccacaattcttaagacaattgg 53705940  T
Q  174 ctcaagaaaacatttccgaccaaaaaccgtatcaagtgg 212  Q
     || || ||||||||||||| ||||||| ||||||||||    
T  53705939 ttcgag-aaacatttccgactaaaaaccatatcaagtgg 53705902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 115
Target Start/End: Original strand, 15212311 - 15212419
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||    |||||||||||| ||||||||||||||||||| | ||    
T  15212311 cattcaacatcaactatcacatatagtttcactattcaagcattccttacattctaagt-tcttagcatacacatctcatgataaacatcatatctatta 15212409  T
Q  106 caatcattca 115  Q
    ||||||||||    
T  15212410 caatcattca 15212419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 15288198 - 15288106
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcata 98  Q
    |||| |||||||||||||| |||||||||||| ||||||| |||| |||||| ||||||||||||||||||| || |||||||||||||||||    
T  15288198 cattaaacatcaactatcaaatatagtttcactattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcata 15288106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 15295308 - 15295216
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcata 98  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||| || |||||||| ||||||||    
T  15295308 cattaaacatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagatagcatacatatctcatgatatacatcata 15295216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 19999381 - 19999547
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc--aagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcat 97  Q
    ||||||||||||||||||||||   |||||||||||||||||  ||  |||||  | || | |||||||| | |||||| ||| |||||| ||| |||||    
T  19999381 aatgtcattcaacatcaactatatgatatagtttcaccattccaaacaattctc-atattccaagtaagagaacatacaacatctcatgacaaatatcat 19999479  T
Q  98 atccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||| |||| || |||||||||    
T  19999480 atccaatacaatcattcattcatataacttcacttagccatataagaatagtcaccacaattcataag 19999547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 8873774 - 8873631
Alignment:
Q  76 cacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgact 175  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||| | ||||||  ||| |||| ||| || |||||  |||||  |    
T  8873774 cacatctcatgataaatatcatatccaacacaatcattcattcatataacttcacttagttatataaacatagtcaccaccgtttataagacaattggtt 8873675  T
Q  176 caagaaaacatttccgaccaaaaaccgtatcaagtggcaaccggc 220  Q
    |||| |||||||| |||||||||||| |||||| |||| ||||||    
T  8873674 caag-aaacattttcgaccaaaaaccatatcaactggccaccggc 8873631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 19019506 - 19019617
Alignment:
Q  86 gataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaaca 185  Q
    ||||||||||| || ||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||| | ||||||| |||||| || ||| |||||    
T  19019506 gataaacatcacattcaa-acaatcattcaatcatacaacttcacttagtcatataagaatagtcacaacaactcataagataattggctaaag-aaaca 19019603  T
Q  186 tttccgaccaaaaa 199  Q
    |||||||| |||||    
T  19019604 tttccgacaaaaaa 19019617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18495708 - 18495604
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcata 98  Q
    |||||||||||||| |||||||| |||||||||| |||| |||||  |||  ||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  18495708 aatgtcattcaacaacaactatctcatatagttttaccatttcaaacatttcttacatcctaagtaagagagcatacaacattccatgataaacatcata 18495609  T
Q  99 tccaa 103  Q
    |||||    
T  18495608 tccaa 18495604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 53909031 - 53908963
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||    
T  53909031 tacacatctcatgataaacatcatatccaaaacaatcattcattcatacaacttcacttagttatataa 53908963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 211
Target Start/End: Complemental strand, 13810838 - 13810709
Alignment:
Q  83 catgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaaga 180  Q
    |||||||||||||||||||||  || |||||||||| |||||||||||||||| ||||||||||||| |||| |  | |||||||  |||||||| || |    
T  13810838 catgataaacatcatatccaacatataatcattcatccatacaacttcacttagtcatataagaatagtcacgataaatcataagacaattgacttaaaa 13810739  T
Q  181 -aaacatttccgaccaaaaaccgtatcaagtg 211  Q
     || ||||||||||  || |||||||||||||    
T  13810738 gaaccatttccgac--aataccgtatcaagtg 13810709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 10487603 - 10487682
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  10487603 acatctcatgataaacatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 10487682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 16329148 - 16329069
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  16329148 acatctcatgataaacatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 16329069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 15212557 - 15212611
Alignment:
Q  61 aagtaagatagcatacacatttcatgataaacatcatatccaatacaatcattca 115  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||||||||    
T  15212557 aagtaagatagcatacatatctcatgataaacatcatatcccatacaatcattca 15212611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7133751 - 7133711
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7133751 aatgtcattcaacatcaactatcacatatagtttcaccatt 7133711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8373209 - 8373249
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8373209 aatgtcattcaacatcaactatcacatatagtttcaccatt 8373249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14950874 - 14950914
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14950874 aatgtcattcaacatcaactatcacatatagtttcaccatt 14950914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18167646 - 18167686
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18167646 aatgtcattcaacatcaactatcacatatagtttcaccatt 18167686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 8373321 - 8373367
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattct 51  Q
    |||||||||||||||||||||||||||||||||||||| || |||||    
T  8373321 tcattcaacatcaactatcacatatagtttcaccattccagcattct 8373367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 110391 - 110456
Alignment:
Q  77 acatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    |||| |||||||| ||||||||||| | | ||||||||||||||||||||||||||| | ||||||    
T  110391 acatctcatgatagacatcatatcccacataatcattcattcatacaacttcacttagttatataa 110456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9294379 - 9294419
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  9294379 aatgttattcaacatcaactatcacatatagtttcaccatt 9294419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34394053 - 34394093
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  34394053 aatgtcattcaaaatcaactatcacatatagtttcaccatt 34394093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 110336 - 110371
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttca 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  110336 aatgtcattcaacatcaactatcacatatagtttca 110371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5684204 - 5684153
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattct 51  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||||    
T  5684204 aatgttattcaacatcaactatcacatatagtttcaccaattcaagcattct 5684153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18294469 - 18294418
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattct 51  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||||    
T  18294469 aatgttattcaacatcaactatcacatatagtttcaccaattcaagcattct 18294418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8044115 - 8044153
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  8044115 aatgttattcaacatcaactatcacatatagtttcacca 8044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 18109923 - 18109838
Alignment:
Q  82 tcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||| ||||| |||||||||||  || ||||| ||||||||||||||||||||| ||||| ||||||  |||| || |||||||||    
T  18109923 tcattataaatatcatatccaaaatataatcactcattcatacaacttcacttagtcataaaagaatggtcaccacaattcataag 18109838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18247042 - 18247146
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc--aagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcat 97  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||  |||| | | ||||||||||||| | ||||| |||| |||||| ||| |||||    
T  18247042 aatgtcattcaacatcaactatatcatatagtttcaccattccaaacaattc-tcatatcctaagtaagagaacatacaacatctcatgacaaatatcat 18247140  T
Q  98 atccaa 103  Q
    ||||||    
T  18247141 atccaa 18247146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34393910 - 34393948
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  34393910 aatgttattcaacatcaactatcacatatagtttcacca 34393948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 53706092 - 53706054
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  53706092 aatgtcattcaacaccaactatcacatatagtttcacca 53706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15212198 - 15212239
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  15212198 aatgtcattcaacatcaactatatcatatagtttcaccattc 15212239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15274062 - 15274021
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  15274062 aatgtcattcaacatcaactatatcatatagtttcaccattc 15274021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15288312 - 15288271
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  15288312 aatgtcattcaacatcaactatatcatatagtttcaccattc 15288271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15295422 - 15295381
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  15295422 aatgtcattcaacatcaactatatcatatagtttcaccattc 15295381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22355866 - 22355826
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  22355866 aatgtcattcaacatcaactatatcatatagtttcaccatt 22355826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 15212605 - 15212633
Alignment:
Q  5 tcattcaacatcaactatcacatatagtt 33  Q
    |||||||||||||||||||||||||||||    
T  15212605 tcattcaacatcaactatcacatatagtt 15212633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26678889 - 26678929
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||| |||||||||||||  |||||||||||||||||    
T  26678889 aatgtcatgcaacatcaactatatcatatagtttcaccatt 26678929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 47356182 - 47356214
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  47356182 aatgttattcaacatcaactatcacatatagtt 47356214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 22407503 - 22407286
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| |||  |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  22407503 aatgtcattcaacatcaactattacatttagtttcaccattcaagcatttcttacattctaagtaagatagcatacacatctcatgataaacatcatatc 22407404  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22407403 caatacaatcattcattcatataacttcacttagtcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 22407304  T
Q  201 cgtatcaagtggcaaccg 218  Q
    ||||||||||||||||||    
T  22407303 cgtatcaagtggcaaccg 22407286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 49966504 - 49966717
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  49966504 aatgtcattcaacatcaactattacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatttcatgataaacatcatatc 49966603  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
     |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||   |||||||||    
T  49966604 aaatacaatca-tcattcatacaacttcacttagtcatataagaataatcataaccattcacaaggtaattgactcaagaaaacattttgcaccaaaaac 49966702  T
Q  201 cgtatcaagtggcaa 215  Q
    |||||||||||||||    
T  49966703 cgtatcaagtggcaa 49966717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 18506211 - 18506422
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18506211 aatgtcattcaacatcaactatcacatatagtttcaccatttaagcattccttacatcctaagtaagatagcatacacatctcatgataaacatcatatc 18506310  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||  ||||||| |||||||||   ||||  ||||| ||||||||||||||||||||    
T  18506311 caatacaatcattcattcatacaacttaacttagtcatataaaaatggtcacaacaattcataagaccattggttcaag-aaacatttccgaccaaaaac 18506409  T
Q  201 cgtatcaagtggc 213  Q
    | |||||||||||    
T  18506410 catatcaagtggc 18506422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 20826419 - 20826206
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  |||||| || ||||||||||||||||||||||||    
T  20826419 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatcacatacatatctcatgataaacatcatatccaata 20826320  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| ||||| |    
T  20826319 caatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaagaccgtgt 20826221  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  20826220 caagtggcaaacggc 20826206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 35053695 - 35053909
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||| |||  ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  35053695 aatgttattcaacatcaactatcacatataatttcaccaattcaagcatttcttacatcctaagtaagatagcatacacatatcatgataaatatcatat 35053794  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||||  |||||||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||  ||||| |||||| |||||||||||||||||    
T  35053795 ccaaaatacaatcattcattcatacaacttcacttagtcatacaagaatggtcacaacaattcataagacaattggctcaag-aaacatttccgaccaaa 35053893  T
Q  198 aaccgtatcaagtggc 213  Q
    |||| |||||||||||    
T  35053894 aaccatatcaagtggc 35053909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 44036208 - 44036024
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||||| |||||| |||||  |||| ||| || ||| |||||||||||||||||| ||||||||||||||||||    
T  44036208 aatgtcattcaacatcaactatcacatatagtctcaccaattcaac-attccttatattcta-gtaagatagcatacacatctcatgataaacatcatat 44036111  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacat 186  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  44036110 ccaatacaatcattcattcatacaacttcacttagtcatacaagaataatcacaaccatttctaaggtaattgactcaagaaaacat 44036024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 2422279 - 2422065
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||  ||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  2422279 aatgtcattcaacatcaactatcacatatagtttcaccaatacaagcatttcttacatcctgagtaagatagcatacacatctcatgatacacatcatat 2422180  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
     ||||||||||||||| ||||||||||||||||| ||||||||||||  ||| ||| |||||||||  ||||| |||||| |||||||| |||||||| |    
T  2422179 tcaatacaatcattcagtcatacaacttcacttagtcatataagaatggtcagaacaattcataagacaattggctcaag-aaacatttgcgaccaaaga 2422081  T
Q  200 ccgtatcaagtggcaa 215  Q
    |||| |||||||||||    
T  2422080 ccgtgtcaagtggcaa 2422065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 21717058 - 21717271
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||  |||||||||||| |||| |||| |||| |||||| |||||||||||||||||||||| |||||||||||||||| |    
T  21717058 aatgtcattcaacatcaactatatcatatagtttcaacatttcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatgt 21717157  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||  |||||||||  ||||  ||||| ||||||||||||||| ||||    
T  21717158 ccaatacaatcattcattcatacaacttcacttcgtcatataagaatattcacaataattcataagacaattcgctcaa-aaaacatttccgacc-aaaa 21717255  T
Q  200 ccgtatcaagtggcaa 215  Q
    || |||||||||||||    
T  21717256 ccatatcaagtggcaa 21717271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 15862741 - 15862592
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||| |||||||     
T  15862741 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaaaatcatatt 15862642  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  15862641 caatacaatcattcattcatacaacttcacttagtcatgcaagaataatc 15862592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 22353134 - 22353279
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  22353134 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaat 22353233  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  22353234 acaataattcattcatacaacttcacttagtcatacaagaataatc 22353279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 5675909 - 5675690
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||| || |||||| || ||||||||||||||||||    
T  5675909 aatgttattcaacatcaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaaggtaacatacatatctcatgataaacatcatat 5675810  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||| ||||| ||||||||||||||||||||||| | |||||| |||  |||| || |||| ||||  |||||  ||||| |||||||||||||||||||    
T  5675809 ccaacacaattattcattcatacaacttcacttagttatataaaaatggtcaccacaattcttaagacaattggttcaag-aaacatttccgaccaaaaa 5675711  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    |||| ||||||||||| ||||    
T  5675710 ccgtgtcaagtggcaaacggc 5675690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 27331078 - 27330861
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||| |||  |||||| ||||  ||  ||||||||||||  |||||||||||||||||    
T  27331078 aatgtcattcaacattaactatctcatatagtttcaccatttcaagcatttcttacattctaatcaa--tagcatacacatcacatgataaacatcatat 27330981  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgac-tcaagaaaacatttccgaccaaaa 198  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||| |||| ||||||||| | ||  || ||||||||||  ||     
T  27330980 ccaatacaatcattcattcatacaacttcacttagtcatataagagtaatcacaacaatttataatgtaattgacttgaaagaaccatttccgac--aat 27330883  T
Q  199 accgtatcaagtggcaaccggc 220  Q
    ||||||||||||||||| ||||    
T  27330882 accgtatcaagtggcaaacggc 27330861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 41210901 - 41211119
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||  |||||||||||||||| |||||| ||||||| |||  |||||||| |||||||||||||||||||| |||||||||| |||||||    
T  41210901 aatgtcattcaacgccaactatcacatatag-ttcaccaattcaagcatttcttacatcccaagtaagatagcatacacatatcatgataaatatcatat 41210999  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||| |||||||||| |||||||||||||||||| | ||||||  |||||||| || |||| || |  |||||  |||| ||||||||| ||||||||||    
T  41211000 ccaaaacaatcattccttcatacaacttcacttagttatataaacataatcaccacaattcttaggacaattggttcaa-aaaacattttcgaccaaaaa 41211098  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||||    
T  41211099 ccatatcaagtggccaccggc 41211119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 35523729 - 35523508
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||  ||||||||  |||| ||||| ||||||||||| |||  |||| |||||| |||||||||||||||||||||  ||||||||||||||||||    
T  35523729 aatgtcacccaacatcatttatctcatatggtttcaccatttcaaacattccttacattctaagtaagatagcatacacaactcatgataaacatcatat 35523630  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||  ||||||| |||||||| ||||||||||||||| ||||| |||||| |||||||  | |||||||  ||||| |||||| |||||||||||| | ||    
T  35523629 ccaaaatacaagcattcatttatacaacttcacttagtcatacaagaatgatcacaataactcataagtaaattggctcaag-aaacatttccgatccaa 35523531  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
    |||| ||||||||||||| ||||    
T  35523530 aaccatatcaagtggcaaacggc 35523508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 22250261 - 22250113
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||| |||||  | || | ||||||||||||||| |||| ||||||||||||||||||    
T  22250261 aatgtcattcaacatcaactatcacaaatagtt-caccaattcaagcattctc-atattccaagtaagatagcatatacatctcatgataaacatcatat 22250164  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
     ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  22250163 tcaatacaatcattcattcatacaacttcacttagtcatacaagaataatc 22250113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 41218316 - 41218442
Alignment:
Q  7 attcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatac 106  Q
    |||| |||||||| ||||||||||||||||||||||||| |||| |||||| ||| |||||||||| ||||| | ||||||| || ||||||||||||||    
T  41218316 attctacatcaacaatcacatatagtttcaccattcaagcattccttacatactaggtaagatagcctacacctctcatgatcaaaatcatatccaatac 41218415  T
Q  107 aatcattcattcatacaacttcactta 133  Q
    |||||||||| ||||||||||||||||    
T  41218416 aatcattcatacatacaacttcactta 41218442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 51657622 - 51657400
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcata 98  Q
    ||||||||||||||||||| | | |||||| |||||||||| |||| |||  |||||| |||||||||| | ||||| |||| |||||||||||||||||    
T  51657622 aatgtcattcaacatcaaccacctcatatattttcaccatttcaagcattggttacattctaagtaagagaacatacgacatctcatgataaacatcata 51657523  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaac-atttccgacca 195  Q
    |||||  |||||||||||||||||||||||||||||| ||||||||||| | |||| |  | |||||||  |||||||| ||   ||| |||||||||      
T  51657522 tccaacatacaatcattcattcatacaacttcacttagtcatataagaacagtcacgataaatcataagacaattgacttaaatgaactatttccgac-- 51657425  T
Q  196 aaaaccgtatcaagtggcaaccggc 220  Q
    || |||||| |||||||||||||||    
T  51657424 aataccgtaccaagtggcaaccggc 51657400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17147635 - 17147801
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||  | || | |||||| |||||||||| || |||||||||||||||| |    
T  17147635 aatgtcattcaacatcaactatcacatatagtttcaccattgcaagcattctc-atattccaagtaatatagcatacatatctcatgataaacatcatgt 17147733  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||  || ||||| ||||||||||||||||||||| ||||| ||||||  ||||||  |||||||||    
T  17147734 ccaaaatataatcactcattcatacaacttcacttagtcatagaagaatggtcacaataattcataag 17147801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 20956278 - 20956127
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatcca 102  Q
    ||||||||||||||||| | |||||||||| |||||| ||||||||  | |||| |||||||||| | |||||| ||| ||||||||||||||||||||     
T  20956278 tcattcaacatcaactacctcatatagttttaccatttcaagtatttctcacattctaagtaagagaacatacaacatctcatgataaacatcatatccg 20956179  T
Q  103 a--tacaatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    |  || |||||||||||||||||| |||||||| ||||||||||||| ||||    
T  20956178 acatataatcattcattcatacaatttcacttagtcatataagaatagtcac 20956127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 21858411 - 21858515
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||||||||||| |||| |  |||| |||||| || ||||||||||||||||||| ||||| ||||||||||||    
T  21858411 aatgtcattcaacatcaactatcacatatagtttcaccaattctaacattccttacattct-agtaagatagcatacacatctcatgctaaacatcatat 21858509  T
Q  100 ccaata 105  Q
    ||||||    
T  21858510 ccaata 21858515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 9785549 - 9785340
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac-cattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||| |||   |||||| |||||||||||||||| |||| |||||||||| |||||      
T  9785549 aatgttattcaacatcaactatcacatatagtttcactcattcaagcatttcctacatcataagtaagatagcatatacatctcatgataaatatcat-- 9785452  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
            ||||||||||||||||||| |||||| | ||||||  ||| |||| || |||| ||||  |||||  ||||| |||| |||   ||||||||    
T  9785451 --------atcattcattcatacaactacacttagttatataaacatagtcaccacaattcttaagacaattggttcaag-aaacgttttttaccaaaaa 9785361  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||||    
T  9785360 ccatatcaagtggccaccggc 9785340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 45050537 - 45050642
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||| ||||||||||    
T  45050537 aatgtcattcaacatcaactaccacatttagtttcaccacttcaaacattccttacattcta-gtaagatagcatacacatctcatgatgaacatcatat 45050635  T
Q  100 ccaatac 106  Q
     ||||||    
T  45050636 tcaatac 45050642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 20894991 - 20894886
Alignment:
Q  12 acatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaatc 110  Q
    |||||||||||||||||||||||||| | |||||  |||  ||||||  |||||||| |||| ||||||| |||||||||| |||||||| || ||||||    
T  20894991 acatcaactatcacatatagtttcacgaattcaaacatttcttacattttaagtaaggtagcttacacatctcatgataaatatcatatcaaacacaatc 20894892  T
Q  111 attcat 116  Q
    ||||||    
T  20894891 attcat 20894886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 37845722 - 37845654
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||| ||||||||||| | | ||||||||||||||||||||||||||| | ||||||    
T  37845722 tacacatctcatgatagacatcatatcccacataatcattcattcatacaacttcacttagttatataa 37845654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 51451544 - 51451623
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||||||||  ||||| ||||||||||||||    
T  51451544 acatctcatgataaacatcatatccaaaatataatcactccttcatacaacttcacttggtcatacaagaataatcacaa 51451623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22365610 - 22365757
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||| |||||  | || | ||||||||  | | ||| ||| |||||||||| ||||||    
T  22365610 aatgttattcaacatcaactatcacatatagtt-caccaattcaagcattctc-atattccaagtaagagggaaaacaacatctcatgataaatatcata 22365707  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    |||||  || ||||| ||||||||||||||||||||| | ||| ||||||    
T  22365708 tccaaaatataatcactcattcatacaacttcacttagtaatacaagaat 22365757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20526973 - 20527010
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20526973 aatgtcattcaacatcaactatcacatatagtttcacc 20527010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 20930380 - 20930450
Alignment:
Q  72 catacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||||| |||||||| ||||||||||  | | || |||||||||||||||||||||||| | ||||||    
T  20930380 catacacatctcatgatagacatcatatctcacataaccattcattcatacaacttcacttagttatataa 20930450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20444601 - 20444638
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc 38  Q
    |||||||||||||||||| |||||||||||||||||||    
T  20444601 aatgtcattcaacatcaaatatcacatatagtttcacc 20444638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20530366 - 20530403
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc 38  Q
    |||||||||||||||||| |||||||||||||||||||    
T  20530366 aatgtcattcaacatcaaatatcacatatagtttcacc 20530403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20826532 - 20826491
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  20826532 aatgtcattcaacatcaactatatcatatagtttcaccattc 20826491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37845774 - 37845737
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  37845774 aatgtcattcaacatcaactatcacatatagtctcacc 37845737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41393305 - 41393346
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  41393305 aatgtcattcaacatcaactatatcatatagtttcaccattc 41393346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 20444653 - 20444721
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||| ||||||||||| | | ||||||||||| |||||| |||||||| | ||||||    
T  20444653 tacacatctcatgatagacatcatatcccacataatcattcatttatacaatttcacttagttatataa 20444721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 20527025 - 20527092
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||| ||||||||||| |   ||||||||||||||||||||||||||| | ||||||    
T  20527025 tacacatctcatgatagacatcatatcccact-aatcattcattcatacaacttcacttagttatataa 20527092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 20530418 - 20530486
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||| ||||||||||| | | ||||||||||| |||||| |||||||| | ||||||    
T  20530418 tacacatctcatgatagacatcatatcccacataatcattcatttatacaatttcacttagttatataa 20530486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 7641903 - 7641803
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagc-atacacatttcatgataaacatcata 98  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||| |||| | |||| | |||||||||||| | | |||| ||||||||| ||||| |    
T  7641903 aatgttattcaacatcaactatcacatatag-ttcaccaattcaagcattc-tcacattccaagtaagatagcaaaatacatctcatgataatcatcaca 7641806  T
Q  99 tcc 101  Q
    |||    
T  7641805 tcc 7641803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18060917 - 18060885
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  18060917 aatgttattcaacatcaactatcacatatagtt 18060885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22352983 - 22353015
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  22352983 aatgttattcaacatcaactatcacatatagtt 22353015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 25121403 - 25121614
Alignment:
Q  4 gtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||  |||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  25121403 gtcattcaacatcaactatcacatatagttttaccattcaagcatttcttacattctaagtaagatagcatgcacatttcatgataaacatcatatccaa 25121502  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgt 203  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  25121503 tacaatcattcatttatacaacttcacttagtcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttttgaccaaaaaccgt 25121602  T
Q  204 atcaagtggcaa 215  Q
    ||||||||||||    
T  25121603 atcaagtggcaa 25121614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 22322736 - 22322525
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| |||| |||||| ||| |||||||||||||||| | |||||||||||||||||||    
T  22322736 aatgtcattcaacatcaactatcacatgtggtttcaccattcaagcattccttacatactaggtaagatagcatacacctctcatgataaacatcatatc 22322637  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||  ||||||| |||||||||  ||||| |||||||||||||||||||||||||||    
T  22322636 caatacaatcattcattcatacaacttcacttagtcatataaaaatggtcacaacaattcataagacaattggctcaagaaaacatttccgaccaaaaac 22322537  T
Q  201 cgtatcaagtgg 212  Q
    | ||||||||||    
T  22322536 catatcaagtgg 22322525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 29759149 - 29759358
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||  |||| ||| || ||| |||||||||||||||||| ||||||||||||||||||    
T  29759149 aatgtcattcaacatcaactatcacatttagtttcaccaattcaaacattccttatattcta-gtaagatagcatacacatctcatgataaacatcatat 29759247  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||     
T  29759248 ccaatacaatcattcattcatacaacttcacttagtcatacaagaataatcacaaccattcataaggtaattgactcaataaaacatctccgatcaaaac 29759347  T
Q  200 ccgtatcaagt 210  Q
    || ||||||||    
T  29759348 ccatatcaagt 29759358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 19994452 - 19994234
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| |||||||||     
T  19994452 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattctttacattctaagtaagatagcatacacatctcatgatacacatcatatt 19994353  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||| ||||||||||||||||||||||||||||| | ||||||  ||| |||| || |||| ||||  |||||| ||||| ||||||||||||||||||||    
T  19994352 caaaacaatcattcattcatacaacttcacttagttatataaacatagtcaccacaattcttaagacaattgattcaag-aaacatttccgaccaaaaac 19994254  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    | ||||||||||| ||||||    
T  19994253 catatcaagtggccaccggc 19994234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 20480527 - 20480748
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| |||||||||||||||||||||||| |||||| | |||||| |||  ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  20480527 aatgttattcaacatcaactatcacatataatttcacaaattcaagcatttcttacatcctaagtaagatagcatacacatctcatgataaatatcatat 20480626  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||  |||||||||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||  | ||| |||||| |||||||||||||||||    
T  20480627 ccaaaatacaatcattcattcatacaacttcacttagtcatacaagaatggtcacaacaattcataagacagttggctcaag-aaacatttccgaccaaa 20480725  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
    |||| ||||||||||| ||||||    
T  20480726 aaccatatcaagtggccaccggc 20480748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 37610225 - 37610443
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||| |||  |||||||||||||||||||||||||| || ||||||||||||||||||    
T  37610225 aatgttattcaacatcaactatcacatatagattcaccgattcaagcatttcttacatcctaagtaagatagcatacatatctcatgataaacatcatat 37610324  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    | || ||||| ||||||||||||||||||||||| ||||||| ||||| |||| || ||| |||||  ||||| |||||| |||||||||||||||||||    
T  37610325 ctaacacaattattcattcatacaacttcacttagtcatatacgaatagtcaccacaatt-ataagacaattggctcaag-aaacatttccgaccaaaaa 37610422  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    |||| ||||||||||| ||||    
T  37610423 ccgtgtcaagtggcaaacggc 37610443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 41245521 - 41245662
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  41245521 aatgtcattcaacatcaactatcacatatagttttaccattcaagcattctttatattctaagtaagatagcatacacatctcatgataaacatcatatc 41245620  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  41245621 caatacaatcattcattcatacaacttcacttagttatataa 41245662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 24107775 - 24107629
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  24107775 cattcaacatcaactatcacatatagtttcaccattcaaacattccttacattctaagtaagatagcatacacatctcatgataaacatcatatccaata 24107676  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    |||||||||||||| ||| ||||||||| ||||||||| ||| ||||    
T  24107675 caatcattcattcaaacatcttcacttagtcatataaggatagtcac 24107629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 28836562 - 28836704
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa-- 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||      
T  28836562 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatccaaag 28836661  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||    
T  28836662 tataatcactcattcatacaacttcacttagtcatacaagaat 28836704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 220
Target Start/End: Original strand, 18611377 - 18611587
Alignment:
Q  7 attcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  |||    
T  18611377 attcaacatcaactatcacatatagtttcaccattcaagtattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaat 18611476  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgta 204  Q
    | ||||| |||||    |||||||||||| ||||||||||||| |||| |  | |||||||  || |||||||| |||||||||||||| |||| ||  |    
T  18611477 ataatcactcatt----caacttcacttagtcatataagaatagtcaccataaatcataagacaaatgactcaa-aaaacatttccgacaaaaatccaaa 18611571  T
Q  205 tcaagtggcaaccggc 220  Q
    ||| ||||||| ||||    
T  18611572 tcatgtggcaaacggc 18611587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21680061 - 21680209
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||| |||||||||| |||| |||  |||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  21680061 aatgtcattcaacatcaactatcacatatattttcaccatttcaagcatttcttacattctaagtaagatagcatacacatctcatgataa-catcatat 21680159  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaata 147  Q
    ||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  21680160 ccaaaatacaatcattcattcatacaacttcacttagtcatataagaata 21680209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 22908673 - 22908532
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||| |||||||||  ||    
T  22908673 cattcaccatcaactatcacatatagtttcaccattcaagtattccttacattctaagtaagatagcatacatatctcatgataaaaatcatatccaaaa 22908574  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaa 145  Q
    |||||| |||||||||||||||||||| || ||||| |||||    
T  22908573 tacaataattcattcatacaacttcacgtagtcatacaagaa 22908532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 20648740 - 20648541
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||| ||||||||| ||||||||||  |||||||||| |||| |||| |||||| |||||||||||||||||| ||  ||||||||||||||||||    
T  20648740 aatgtcatccaacatcaattatcacatatgctttcaccatttcaagcattccttacattctaagtaagatagcatacccaactcatgataaacatcatat 20648641  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    | ||  |||||||||||||| ||||||||||||||| ||||| |||||| |||||||  |||||||||  ||| | |||||| ||||||||||| |||||    
T  20648640 caaaaatacaatcattcatttatacaacttcacttagtcatacaagaatgatcacaataattcataagccaatcggctcaag-aaacatttccggccaaa 20648542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 24387010 - 24386843
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||| | ||||||| |||||  |||| ||||||| ||||||||||||||||||| | |||||||||  ||||||     
T  24387010 aatgtcattcaacatcaactatcacatatggattcaccaattcaaacattccttacatcttaagtaagatagcatacacttctcatgataattatcataa 24386911  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||  ||||||| |||||||||||||||||||||||||||| ||||||  ||||||| |||||||||    
T  24386910 ccaaaatacaatctttcattcatacaacttcacttaatcatacaagaatggtcacaacaattcataag 24386843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 24930302 - 24930160
Alignment:
Q  7 attcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||||||||||||||||| || ||||||||| ||||||||||  ||    
T  24930302 attcaacatcaactatcacatatagtttcaccatttcaaggattccttacattctaagtaagatagcatacatatctcatgataatcatcatatccaaaa 24930203  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    |||| ||||||| ||||||||||||||||| ||||| ||||||    
T  24930202 tacattcattcactcatacaacttcacttagtcatacaagaat 24930160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 22007786 - 22007638
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||| |||||  | || | |||||||||||||||||||| ||||| ||||||||||||    
T  22007786 aatgttattcaacatcaactatcacatatagtt-cacctattcaagcattctc-atattccaagtaagatagcatacacatctcatgttaaacatcatat 22007689  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
     ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  22007688 tcaatacaatcattcattcatacaacttcacttagtcatacaagaataatc 22007638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 20655325 - 20655158
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||| ||||||||| |||||||||| ||||||||||| |||| |||| |||||| |||||||||||| ||||| ||  ||||||||||||||||||    
T  20655325 aatgtcatccaacatcaattatcacatatcgtttcaccatttcaagcattccttacattctaagtaagataccatacccaactcatgataaacatcatat 20655226  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||  |||||||||||||| ||| ||||||||||| ||||| |||||| |||||||  |||||||||    
T  20655225 ccaaaatacaatcattcatttataaaacttcacttagtcatacaagaatgatcacaataattcataag 20655158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 21696420 - 21696639
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||| |  |||||||||||||||| |||| |||  |||||| |||||||||| | ||||||||| ||||||||||||||||||    
T  21696420 aatgtcattcaacatcaactaccttatatagtttcaccatttcaagcatttcttacattctaagtaagagaacatacacatctcatgataaacatcatat 21696519  T
Q  100 cca--atacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    |||  |||||||||||||||||||||||||||||||  ||| |||||||| |||| |  |  ||||||  |||||||| ||  || ||||||||||  ||    
T  21696520 ccaacatacaatcattcattcatacaacttcacttagccatgtaagaatagtcacgatga-acataagacaattgacttaaagaaccatttccgac--aa 21696616  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
     ||||||||||||||||| ||||    
T  21696617 taccgtatcaagtggcaaacggc 21696639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16417119 - 16417266
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||| |||  |||||||||||||||| |||||| ||||| ||| ||||| ||||||||    
T  16417119 aatgttattccacatcaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaaggtagcatgcacatctcacgataagcatcatat 16417218  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaata 147  Q
    |  ||||||||||||| |||||||| |||||||| |||||||||||||    
T  16417219 ctcatacaatcattcaatcatacaatttcacttagtcatataagaata 16417266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 43374884 - 43374782
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||| || |||||||||||||||||||    
T  43374884 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacatatctcatgataaacatcatatc 43374785  T
Q  101 caa 103  Q
    |||    
T  43374784 caa 43374782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13663790 - 13663635
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| |||  | |||| | ||||||||||||||||| || ||||||||| ||||||||    
T  13663790 aatgtcattcaacatcaactatcacatatagtt-caccaattcaagcatttctcacattccaagtaagatagcatacatatctcatgataagcatcatat 13663692  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    ||||  || ||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  13663691 ccaaaatataatcactcattcatacaacttcacttagtcatacaagaataatcacaa 13663635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 24718718 - 24718564
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||  | || | |||||||| | |||||| ||| |||||| ||| ||||||    
T  24718718 aatgtcattcaacatcaactatcacatatagtttcaccatttcaagcattctc-atattccaagtaagagaacatacaacatctcatgacaaatatcata 24718620  T
Q  99 tccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    ||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||    
T  24718619 tccaacacaatcattcattcatacaacttcacttagtcatacaaaaataatcacaa 24718564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 13722325 - 13722174
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| |||  | |||| | ||||||||||||||||| || ||||||||| ||||||||    
T  13722325 aatgtcattcaacatcaactatcacatatagtt-cactaattcaagcatttctcacattccaagtaagatagcatacatatctcatgataagcatcatat 13722227  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||  || ||||| ||||||||||||||||||||| ||||||||||||||||    
T  13722226 ccaaaatataatcactcattcatacaacttcacttagtcatataagaataatc 13722174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 16874240 - 16874074
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||  | || | |||||| |||||||||| || |||||||||||||||| |    
T  16874240 aatgtcattcaacatcaactatcacatatagtttcaccattgcaagcattctc-atattccaagtaatatagcatacatatctcatgataaacatcatgt 16874142  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||  || ||||| ||||||||||||||||||||| ||||| ||||||  ||||||  |||||||||    
T  16874141 ccaaaatataatcactcattcatacaacttcacttagtcatagaagaatggtcacaataattcataag 16874074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 20568567 - 20568356
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||  |||||| ||| |||| ||||||||  |  ||   | |||| |||||||||||||||||||||| ||||||||  ||||||||     
T  20568567 aatgtcattcaacatttactatctcatgtagtctcaccatttcaacatgtctcacattctaagtaagatagcatacacatctcatgatat-catcatatt 20568469  T
Q  101 ca--atacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
     |  ||||||| ||||||||||||||||||||||| ||||||||||||| |||| |   |||||||| |||||| |||||| |||||||| |||||||||    
T  20568468 aatcatacaattattcattcatacaacttcacttagtcatataagaatagtcacgatatttcataagataattggctcaag-aaacattttcgaccaaaa 20568370  T
Q  199 accgtatcaagtgg 212  Q
    ||||| ||||||||    
T  20568369 accgtgtcaagtgg 20568356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 20574760 - 20574549
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||  |||||| ||| |||| ||||||||  |  ||   | |||| |||||||||||||||||||||| ||||||||  ||||||||     
T  20574760 aatgtcattcaacatttactatctcatgtagtctcaccatttcaacatgtctcacattctaagtaagatagcatacacatctcatgatat-catcatatt 20574662  T
Q  101 ca--atacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
     |  ||||||| ||||||||||||||||||||||| ||||||||||||| |||| |   |||||||| |||||| |||||| |||||||| |||||||||    
T  20574661 aatcatacaattattcattcatacaacttcacttagtcatataagaatagtcacgatatttcataagataattggctcaag-aaacattttcgaccaaaa 20574563  T
Q  199 accgtatcaagtgg 212  Q
    ||||| ||||||||    
T  20574562 accgtgtcaagtgg 20574549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 3432877 - 3432661
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| |||||  | || | |||||| |  | | ||| ||| |||||||||| ||||||    
T  3432877 aatgtcattcaacatcaactatcacatatagtt-caccaattcaagcattctc-atattccaagtaatagggaaaacaacatctcatgataaatatcata 3432780  T
Q  99 tccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    |||||||||||||||||||||||||  ||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| |||||||||||||||||     
T  3432779 tccaatacaatcattcattcataca--ttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaag 3432683  T
Q  199 accgtatcaagtggcaaccggc 220  Q
    | ||| ||||||||||| ||||    
T  3432682 aacgtgtcaagtggcaaacggc 3432661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17730765 - 17730612
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||||| |||| ||||| || ||| |||  |||  ||||||||||||||||| | |||||| |||| ||||||||||||||||    
T  17730765 aatgtcattcaacatcaactatctcatacagttttactatttcaaacatttcttacatcctaagtaagagaacatacaacattccatgataaacatcata 17730666  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||  || |||||||||||||||||| |||||| ||||||| ||||||||||    
T  17730665 tccaacatataatcattcattcatacaaattcactcaatcatagaagaataatc 17730612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 38532517 - 38532685
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||| | |||||||||| |||||| |||| |||  ||||||  ||||||||| | |||||| |||  ||||||||||||||||    
T  38532517 aatgtcattcaacatcaactacctcatatagttttaccatttcaagcatttattacattataagtaagagaacatacaacatcccatgataaacatcata 38532616  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||||  || |||||||||||||||||| |||||||| ||||||||||||| |||| |  |||||||||    
T  38532617 tccaacatataatcattcattcatacaatttcacttagtcatataagaatagtcacgataattcataag 38532685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 6775420 - 6775326
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcatat 99  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||| ||||| |||| ||||||||||||||||||    
T  6775420 cattcaaaatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagataacatacaacatctcatgataaacatcatat 6775326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 28556874 - 28556998
Alignment:
Q  30 agtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aatacaatcattcattcatacaact 126  Q
    |||||||||||| |||| |||  |||||| |||||||||||| ||||||||| |||| |||||||||||||||  ||||||||||| |||||||||||||    
T  28556874 agtttcaccatttcaagcatttcttacattctaagtaagatatcatacacatctcataataaacatcatatccaaaatacaatcatccattcatacaact 28556973  T
Q  127 tcacttaatcatataagaataatcac 152  Q
    ||| ||| ||||||||||||| ||||    
T  28556974 tca-ttagtcatataagaatagtcac 28556998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 16040549 - 16040335
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatccaa 103  Q
    |||||||||||||||||||||||||||||||||| |||||| |||  | | || | |||||| || | | ||| ||| |||||||||| |||||||||||    
T  16040549 cattcaacatcaactatcacatatagtttcaccaattcaagcatt--tcatattccaagtaatatggaaaacaacatctcatgataaatatcatatccaa 16040452  T
Q  104 --tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaacc 201  Q
      || ||||| ||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||  ||||   | ||| |||||||||||||| || |||    
T  16040451 aatataatcactcattcatacaacttcacttagtcatacaagaatggtcacaacaattcataagacaattagtttaag-aaacatttccgacc-aagacc 16040354  T
Q  202 gtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||    
T  16040353 gtgtcaagtggcaaacggc 16040335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 16042337 - 16042123
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||  | | || | |||||| || | | ||| ||| |||||||||| ||||||    
T  16042337 aatgttattcaacatcaactatcacatatagtttcaccaattcaagcatt--tcatattccaagtaatatggaaaacaacatctcatgataaatatcata 16042240  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaa 196  Q
    |||||  || ||||| ||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||  ||||   | ||| |||||||||||||| |    
T  16042239 tccaaaatataatcactcattcatacaacttcacttagtcatacaagaatggtcacaacaattcataagacaattagtttaag-aaacatttccgacc-a 16042142  T
Q  197 aaaccgtatcaagtggcaa 215  Q
    | ||||| |||||||||||    
T  16042141 agaccgtgtcaagtggcaa 16042123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24548076 - 24548181
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||| ||||||||||    
T  24548076 aatgtcattcaacatcaactaccacatttagtttcaccacttcaaacattccttacattcta-gtaagatagcatacacatctcatgatgaacatcatat 24548174  T
Q  100 ccaatac 106  Q
     ||||||    
T  24548175 tcaatac 24548181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 220
Target Start/End: Complemental strand, 16406295 - 16406149
Alignment:
Q  73 atacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattg 172  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||  ||| ||||  | |||| || |  |||||    
T  16406295 atacacatctcatgataaatatcatatccaaaacaatcattcattcatacaacttcacttagtcatacaaacatagtcacctcaattcttaggacaattg 16406196  T
Q  173 actcaagaaaacatttccgaccaaaaaccgtatcaagtggcaaccggc 220  Q
      ||||| |||| ||| |||||||||||| ||||| ||||| ||||||    
T  16406195 gttcaag-aaacgttttcgaccaaaaaccatatcatgtggccaccggc 16406149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 5237128 - 5237207
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  5237128 acatctcatgataaacatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 5237207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 24662470 - 24662391
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  24662470 acatctcatgataaacatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 24662391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 17151445 - 17151399
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattct 51  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  17151445 tcattcaacatcaactatcacatatagtttcaccattcaagcattct 17151399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 270587 - 270687
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac-cattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||   ||   || ||| ||||||||||| |||| |||| |||||||||| |||||||    
T  270587 aatgttattcaacatcaactatcacatatagtttcactcattcaaacgtttcctaaatcataagtaagataacatatacatctcatgataaatatcatat 270686  T
Q  100 c 100  Q
    |    
T  270687 c 270687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 645333 - 645233
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac-cattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||   ||   || ||| ||||||||||| |||| |||| |||||||||| |||||||    
T  645333 aatgttattcaacatcaactatcacatatagtttcactcattcaaacgtttcctaaatcataagtaagataacatatacatctcatgataaatatcatat 645234  T
Q  100 c 100  Q
    |    
T  645233 c 645233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 831068 - 830968
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac-cattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||   ||   || ||| ||||||||||| |||| |||| |||||||||| |||||||    
T  831068 aatgttattcaacatcaactatcacatatagtttcactcattcaaacgtttcctaaatcataagtaagataacatatacatctcatgataaatatcatat 830969  T
Q  100 c 100  Q
    |    
T  830968 c 830968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13722473 - 13722433
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13722473 aatgtcattcaacatcaactatcacatatagtttcaccatt 13722433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13722621 - 13722581
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13722621 aatgtcattcaacatcaactatcacatatagtttcaccatt 13722581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13722769 - 13722729
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13722769 aatgtcattcaacatcaactatcacatatagtttcaccatt 13722729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13722917 - 13722877
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13722917 aatgtcattcaacatcaactatcacatatagtttcaccatt 13722877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13723065 - 13723025
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13723065 aatgtcattcaacatcaactatcacatatagtttcaccatt 13723025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24107888 - 24107848
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24107888 aatgtcattcaacatcaactatcacatatagtttcaccatt 24107848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24930415 - 24930375
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24930415 aatgtcattcaacatcaactatcacatatagtttcaccatt 24930375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 16194986 - 16194917
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataag 143  Q
    ||||||| | |||||| ||||||||||| | | ||||||||||||||||||||||||||| | |||||||    
T  16194986 tacacatcttatgatagacatcatatcccacataatcattcattcatacaacttcacttagttatataag 16194917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16195038 - 16195001
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16195038 aatgtcattcaacatcaactatcacatatagtttcacc 16195001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16040661 - 16040621
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  16040661 aatgttattcaacatcaactatcacatatagtttcaccatt 16040621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17151557 - 17151521
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  17151557 aatgtcattcaacatcaactatcacatatagtttcac 17151521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 18618028 - 18618062
Alignment:
Q  7 attcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||    
T  18618028 attcaacatcaactatcacatatagtttcaccatt 18618062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 22144136 - 22144250
Alignment:
Q  66 agatagcatacacatttcatgataaacatcatatcc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcata 163  Q
    |||||||||||| || ||||||||||||||||||||  |||| ||||| |||||    ||||||| |||| ||||||||||||| |||| |  | |||||    
T  22144136 agatagcatacatatctcatgataaacatcatatccaaaatataatcactcatt----caacttcgcttagtcatataagaatattcaccataaatcata 22144231  T
Q  164 aggtaattgactcaagaaa 182  Q
    ||  || ||||||||||||    
T  22144232 agacaaatgactcaagaaa 22144250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6775533 - 6775492
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  6775533 aatgtcattcaacatcaactatatcatatagtttcaccattc 6775492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22908786 - 22908745
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  22908786 aatgtcattcaacatcaactatatcatatagtttcaccattc 22908745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28836449 - 28836490
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  28836449 aatgtcattcaacatcaactatatcatatagtttcaccattc 28836490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 224462 - 224430
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  224462 aatgttattcaacatcaactatcacatatagtt 224430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 700875 - 700843
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  700875 aatgttattcaacatcaactatcacatatagtt 700843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 738085 - 738053
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  738085 aatgttattcaacatcaactatcacatatagtt 738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 861980 - 861948
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  861980 aatgttattcaacatcaactatcacatatagtt 861948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13663937 - 13663905
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  13663937 aatgttattcaacatcaactatcacatatagtt 13663905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13723212 - 13723180
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  13723212 aatgttattcaacatcaactatcacatatagtt 13723180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43684509 - 43684549
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||| |||||||||||||  |||||||||||||||||    
T  43684509 aatgtcatgcaacatcaactatatcatatagtttcaccatt 43684549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 43684587 - 43684666
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| |   |||| |||| ||||||| ||||| ||||||||||||||    
T  43684587 acatctcatgataaacatcatatccaaaatataatcacttcctcatgcaacctcacttagtcatacaagaataatcacaa 43684666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 32897585 - 32897802
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||  |||  |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  32897585 aatgtcattcaacatcaattattacatttagtttcaccattcaaacatttcttacattctaagtaagatagcatacacatctcatgataaacatcatatc 32897684  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32897685 caatacaatcattcattcatataacttcacttagtcatataagaataatcataaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 32897784  T
Q  201 cgtatcaagtggcaaccg 218  Q
    ||||||||||||||||||    
T  32897785 cgtatcaagtggcaaccg 32897802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 19984507 - 19984298
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  19984507 aatgtcattcaacatcaactatcacatttagtttcaccaattcaaacattccttacattcta-gtaagatagcatacacatctcatgataaacatcatat 19984409  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||     
T  19984408 ccaatacaatcattcattcatacaacttcacttagtcatacaagaataatcacaaccattcataaggtaatttactcaagaaaacatctccgatcaaaac 19984309  T
Q  200 ccgtatcaagt 210  Q
    || ||||||||    
T  19984308 ccatatcaagt 19984298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 25646129 - 25645918
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  25646129 aatgtcattcaacatcaattatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatgcacatctcatgataaacatcatatc 25646030  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||  ||||||| |||||||||  ||||| || ||| ||||||||||||||||| ||    
T  25646029 caatacaatcattcattcatacaacttcacttagtaagataagaatggtcacaacaattcataagacaattggctaaag-aaacatttccgaccaaacac 25645931  T
Q  201 cgtatcaagtggc 213  Q
    | |||||||||||    
T  25645930 catatcaagtggc 25645918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 16230555 - 16230768
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  |||||| || ||||||||||||||||||||||||    
T  16230555 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatcacatacatatctcatgataaacatcatatccaata 16230654  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| ||||| |    
T  16230655 caatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaagaccgtgt 16230753  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  16230754 caagtggcaaacggc 16230768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 18776070 - 18776291
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||||||| |||| |||||||||| |||||||    
T  18776070 aatgttattcaacatcaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaagatagcatatacatctcatgataaatatcatat 18776169  T
Q  100 cca--atacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    |||  ||||||||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||  ||||| |||||| |||||||||| ||||||    
T  18776170 ccagaatacaatcattcattcatacaacttcacttagtcataaaagaatggtcacaacaattcataagacaattggctcaag-aaacatttccaaccaaa 18776268  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
    |||| ||||||||||| ||||||    
T  18776269 aaccatatcaagtggccaccggc 18776291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 18824847 - 18824637
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  18824847 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatccaat 18824748  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactc-aagaaaacatttccgaccaaaaaccgt 203  Q
    ||||||||||||||| ||| ||||||||| ||||||||| ||| ||||||    | |||||  |||||  || ||| |||||||||||| ||||||||||    
T  18824747 acaatcattcattcacacatcttcacttagtcatataaggatagtcacaatagattataagaaaattggttcaaaggaaacatttccga-caaaaaccgt 18824649  T
Q  204 atcaagtggcaa 215  Q
    ||||||||||||    
T  18824648 atcaagtggcaa 18824637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 25174527 - 25174671
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  25174527 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaata 25174626  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  25174627 caatcattcattcatacaacttcacttagtcatacaagaataatc 25174671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 4989869 - 4990079
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  4989869 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatccaat 4989968  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactc-aagaaaacatttccgaccaaaaaccgt 203  Q
    ||||||||||||||| ||| ||||||||| ||||||||| ||| |||| |    | |||||  |||||  || ||| |||||||||||| ||||||||||    
T  4989969 acaatcattcattcaaacatcttcacttagtcatataaggatagtcacgatagattataagaaaattggttcaaaggaaacatttccga-caaaaaccgt 4990067  T
Q  204 atcaagtggcaa 215  Q
    ||||||||||||    
T  4990068 atcaagtggcaa 4990079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 18431495 - 18431708
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| | |||||||||||||||||||| ||||||| ||||||||||     
T  18431495 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattccaagtaagatagcatacacatctcatgat-aacatcatatt 18431593  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
     ||| ||||||||| |||||||||| ||||||| | ||||||||||| ||||||  ||||| |||  ||||| |||||| ||||||||||||||||||||    
T  18431594 taatgcaatcattctttcatacaacctcacttagtgatataagaatagtcacaataattcacaagacaattggctcaag-aaacatttccgaccaaaaac 18431692  T
Q  201 cgtatcaagtggcaac 216  Q
    | || |||||||||||    
T  18431693 cataccaagtggcaac 18431708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 27655287 - 27655147
Alignment:
Q  10 caacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaat 109  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  27655287 caacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaatacaat 27655188  T
Q  110 cattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  27655187 cattcattcatacaacttcacttagtcatacaagaataatc 27655147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 18569448 - 18569660
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  18569448 aatgttattcaacatcaactatcacatatagtttcactaattcaagcatttcttacatcctaagtaagatagcatacacatctcatgataaatatcatat 18569547  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||||  |||||||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||  ||||| |||||| ||| |||||||||| ||    
T  18569548 ccaaaatacaatcattcattcatacaacttcacttagtcatacaagaatggtcacaacaattcataagacaattggctcaag-aaagatttccgacc-aa 18569645  T
Q  198 aaccgtatcaagtgg 212  Q
    |||| ||||||||||    
T  18569646 aaccatatcaagtgg 18569660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 18840702 - 18840555
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  18840702 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatccaat 18840603  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    ||||||||||||||| ||| ||||||||| ||||||||| ||| ||||    
T  18840602 acaatcattcattcacacatcttcacttagtcatataaggatagtcac 18840555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 33315767 - 33315628
Alignment:
Q  11 aacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaatc 110  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  33315767 aacatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaatacaatc 33315668  T
Q  111 attcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  33315667 attcattcatacaacttcacttagtcatacaagaataatc 33315628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 18004154 - 18004002
Alignment:
Q  14 atcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatccaatacaatcat 112  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  18004154 atcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacaacatctcatgataaacatcatatccaatacaatcat 18004055  T
Q  113 tcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||||||||||||||||||||  |||||||||||| |||| || |||||||||    
T  18004054 tcattcatacaacttcacttagccatataagaatagtcaccacaattcataag 18004002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 16105421 - 16105638
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  16105421 aatgtcattcaacatcaactattacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcaagataaacatcatatc 16105520  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    |||||||||| |   ||| |||||||||||||| |||||||| ||| |||||||  | ||||||   ||||| |||||| |||||||| ||||| ||| |    
T  16105521 caatacaatcttcttttcgtacaacttcacttagtcatataaaaatgatcacaataactcataaaacaattggctcaag-aaacattttcgacc-aaatc 16105618  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    | ||||||||||||| ||||    
T  16105619 catatcaagtggcaaacggc 16105638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 15736362 - 15736160
Alignment:
Q  14 atcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatccaatacaatcat 112  Q
    ||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  15736362 atcaactatcacatatagttttaccattcaagcattccttacattctaagtaagataacatacaacatctcatgataaacatcatatccaatacaatcat 15736263  T
Q  113 tcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatcaagtgg 212  Q
    ||||||||||||||| ||||| | ||||||  |||  ||| || |||| ||||  |||||  |||| |||||||||||||| |||| |||||||||||||    
T  15736262 tcattcatacaactttacttagttatataaacatagccaccacaattcttaagacaattggttcaaaaaaacatttccgactaaaagccgtatcaagtgg 15736163  T
Q  213 caa 215  Q
    |||    
T  15736162 caa 15736160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 13622302 - 13622160
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||||||  ||    
T  13622302 cattcaacatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatccaaaa 13622203  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||    
T  13622202 tacagtcattcattcatacaacttcacttagtcatacaagaat 13622160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 35016983 - 35016770
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||  | || | |||||||||| |||||| || ||||||||| ||||||||    
T  35016983 aatgtcattcaacatcaactatcacatatagtttaaccatttcaagcattctc-atattccaagtaagataacatacatatctcatgataatcatcatat 35016885  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||| |||  ||||| |||||| |||||||||| || ||||     
T  35016884 ccaatacaatcattcattcatacaacttcacttagtcatataagaataatcacaataactcacaagacaattggctcaag-aaacatttccaacaaaaat 35016786  T
Q  200 ccgtatcaagtggcaa 215  Q
    ||  |||| |||||||    
T  35016785 ccaaatcatgtggcaa 35016770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 18824951 - 18824841
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  18824951 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatccaat 18824852  T
Q  105 acaatcattca 115  Q
    |||||||||||    
T  18824851 acaatcattca 18824841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 18840806 - 18840696
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  18840806 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatccaat 18840707  T
Q  105 acaatcattca 115  Q
    |||||||||||    
T  18840706 acaatcattca 18840696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 16084943 - 16085136
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  16084943 aatgtcattcaacatcaactattacatatagtttcacccttcaagcattccttacattctaagtaagatagcatacacatctcaagataaacatcatatc 16085042  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    |||||||||| |  ||||||||||||  ||||| |||||||| ||| |||||||  | ||||||   ||||| |||||| |||||||| ||||||||    
T  16085043 caatacaatcttctattcatacaact--acttagtcatataaaaatgatcacaagaactcataaaacaattggctcaag-aaacattttcgaccaaa 16085136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 25745634 - 25745422
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||||||| || | |||||| |||   |||||| ||||||||||||||||||||| |||||||||| |||||||    
T  25745634 aatgtcattcaacatcaactatcacatatagttttactaattcaagcatttcctacatcataagtaagatagcatacacatctcatgataaatatcatat 25745535  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    || | |||||||||| |||||||||||||||||| | ||||||   || |||| |||||| |||||  |||||  ||||| |||||||| ||||||||||    
T  25745534 cctacacaatcattcgttcatacaacttcacttagttatataaacgtagtcaccaccatttataagacaattggttcaag-aaacattttcgaccaaaaa 25745436  T
Q  200 ccgtatcaagtggc 213  Q
    || |||||||||||    
T  25745435 ccatatcaagtggc 25745422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 198
Target Start/End: Complemental strand, 16827065 - 16826872
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  16827065 cattcaaaatcaactatcacatatagtttcaccatccaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 16826966  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||  ||||||  | |||||||  ||||| || ||| ||||||||||||| ||||    
T  16826965 tataatcactcattcatacaacttcacttagtcatacaagaatggtcacaataactcataagacaattggctaaag-aaacatttccgacaaaaa 16826872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 18582151 - 18582367
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcca--a 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| || |||||||||||||||||||||  |    
T  18582151 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaca 18582250  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaaga-aaacatttccgaccaaaaaccg 202  Q
    || || |||||||||| ||| ||||||||| ||||||||| ||| |||| |    |||||||  |||||  |||| | |||| ||||||| ||||||||     
T  18582251 tataaccattcattcacacatcttcacttagtcatataaggatagtcacgatagatcataagaaaattggttcaaaagaaacttttccga-caaaaacca 18582349  T
Q  203 tatcaagtggcaaccggc 220  Q
    ||||||||||||| ||||    
T  18582350 tatcaagtggcaaacggc 18582367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 22431110 - 22431320
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| |||| ||||||||| ||| |||||||||||||| |||||| |||  ||||||||||||||||||| ||||| ||| | ||||||| |||||||     
T  22431110 aatgttattctacatcaactttcatatatagtttcaccaattcaagcatttcttacatcctaagtaagataacatacgcatcttatgataagcatcatac 22431209  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    || ||||||||||||| ||||||||||||||||| |||||||| |||| || | || |||||||||  ||||| |||||| |||||||||||||| ||||    
T  22431210 cccatacaatcattcaatcatacaacttcacttagtcatataaaaatagtctccacaattcataagacaattggctcaag-aaacatttccgacc-aaaa 22431307  T
Q  200 ccgtatcaagtgg 212  Q
    || ||||||||||    
T  22431308 ccatatcaagtgg 22431320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 14627791 - 14627658
Alignment:
Q  14 atcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatccaatacaatcat 112  Q
    |||||||||||||||||||||||||||||||| |||  |||||| |||||||||||| |||||| ||| ||||||||||| |||||||||||||||| ||    
T  14627791 atcaactatcacatatagtttcaccattcaagcatttcttacattctaagtaagataacatacaacatctcatgataaacgtcatatccaatacaattat 14627692  T
Q  113 tcattcatacaacttcacttaatcatataagaat 146  Q
    ||||||||||||||||||||| ||||| ||||||    
T  14627691 tcattcatacaacttcacttagtcatacaagaat 14627658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 23152121 - 23152318
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||| | ||||| |||||  |||  |||||||||| |||||||| ||| ||||| |||||||||| ||| |||    
T  23152121 aatgtcattcaacatcaactatcacatatagctccaccaattcaaacatttcttacatcctaggtaagataacatgcacatctcatgataaatatcttat 23152220  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||||  ||||||  | ||| |||  ||||| |||||| ||||||||||||| ||||    
T  23152221 ccaacacaatcattcattcatacaacttaacttaatcatacaagaatggtcacaataactcacaagacaattggctcaag-aaacatttccgacaaaaa 23152318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 18088014 - 18087846
Alignment:
Q  1 aatgtcattcaa-catcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcata 98  Q
    |||||||||||| ||||||||||||||||||||||||| | |||||  |||| ||||||| |||||||||| |||||||| | |||||||||  ||||||    
T  18088014 aatgtcattcaatcatcaactatcacatatagtttcacaaattcaaacattccttacatcttaagtaagatggcatacacctctcatgataattatcata 18087915  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||||  |||||||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||    
T  18087914 tccaaaatacaatcattcattcatacaacttcacttagtcatacaagaatggtcacaacaattcataag 18087846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 19628302 - 19628490
Alignment:
Q  7 attcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aat 104  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| || |||||||||||||||||| |  |||    
T  19628302 attcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatattcaaaat 19628401  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    | ||||| |||||    ||||||| |||| ||||||||||||| |||| |  | |||||||  || |||||||| |||||||||||||| ||||    
T  19628402 ataatcactcatt----caacttcgcttagtcatataagaatagtcaccataaatcataagacaaatgactcaa-aaaacatttccgacaaaaa 19628490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1659013 - 1658915
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||| ||||||||| ||||||||||||||||||    
T  1659013 aatgttattcaacatcaactatcacatatagtttcaccattcaagcattccttgcattctaagtaagataccatacacatctcatgataaacatcatat 1658915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 19609350 - 19609442
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcata 98  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||| || |||||||||||||||||    
T  19609350 cattaaacatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcata 19609442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 23976429 - 23976595
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc--aagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcat 97  Q
    ||||||||||||||||||||||   |||||||||||||||||  ||  |||||  | || | |||||||| | |||||| ||| |||||| ||| |||||    
T  23976429 aatgtcattcaacatcaactatatgatatagtttcaccattccaaacaattctc-atattccaagtaagagaacatacaacatctcatgacaaatatcat 23976527  T
Q  98 atccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||| |||| || |||||||||    
T  23976528 atccaatacaatcattcattcatataacttcacttagccatataagaatagtcaccacaattcataag 23976595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 26088787 - 26088893
Alignment:
Q  61 aagtaagatagcatacacatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccat 158  Q
    |||||||||||||||||| | |||||||||  |||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||  ||||||| ||    
T  26088787 aagtaagatagcatacacttctcatgataattatcatatccaaaatacaatcattcattcatacaacttcacttagtcatacaagaatggtcacaacaat 26088886  T
Q  159 tcataag 165  Q
    |||||||    
T  26088887 tcataag 26088893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 25368646 - 25368428
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatcca 102  Q
    ||||||||||| ||||| | |||||||||| |||||| |||| |||  | || |  ||||||||| |||||||| |||  |||||||||||||||||||     
T  25368646 tcattcaacataaactacctcatatagttttaccatttcaagcatttctcaccttttaagtaagagagcatacaacatcacatgataaacatcatatccg 25368547  T
Q  103 a--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    |  || ||||||||||||||||||||||||||| ||||||||||| | |||| |  | |||||||   ||||||||||   |||||||||||  ||| ||    
T  25368546 acatataatcattcattcatacaacttcacttagtcatataagaacagtcacgataaatcataagtcgattgactcaaaggaacatttccga-taaatac 25368448  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    ||||||||||||||| ||||    
T  25368447 cgtatcaagtggcaaacggc 25368428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 1651253 - 1651148
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||| ||||||||||    
T  1651253 aatgtcattcaacatcaactaccacatttagtttcaccacttcaaacattccttacattcta-gtaagatagcatacacatctcatgatgaacatcatat 1651155  T
Q  100 ccaatac 106  Q
     ||||||    
T  1651154 tcaatac 1651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 22867026 - 22867166
Alignment:
Q  9 tcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa--tac 106  Q
    |||||||  |||||| |||||||||||| |||||||  ||||||||| | |||| ||||| | ||| ||||| ||||||||  ||| ||||||||  |||    
T  22867026 tcaacatttactatctcatatagtttcatcattcaaacattctttacgttctaaataagagaacatgcacatctcatgatattcattatatccaacatac 22867125  T
Q  107 aatcattcattcatacaacttcacttaatcatataagaata 147  Q
    ||||||| ||||||||||||||||||| |||||||| ||||    
T  22867126 aatcatttattcatacaacttcacttagtcatataaaaata 22867166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 21776870 - 21776791
Alignment:
Q  21 atcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||| ||||| |||| ||||||||||||||||||    
T  21776870 atcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacaacatctcatgataaacatcatat 21776791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 18397842 - 18397982
Alignment:
Q  54 acatcctaagtaagatagcatacacatttcatgataaacatcatatcca--atacaatcattcattcatacaacttcacttaatcatataagaataatca 151  Q
    |||| |||||||||||| ||||||||| ||||||||  ||||||||| |  ||||||| ||||||||||||||||||||||| ||||||||||||| |||    
T  18397842 acattctaagtaagataacatacacatctcatgatat-catcatatcaatcatacaattattcattcatacaacttcacttagtcatataagaatactca 18397940  T
Q  152 caaccattcataaggtaattgac-tcaagaaaacatttccga 192  Q
    | |   ||||||||  ||||||| | |||||| |||||||||    
T  18397941 cgatacttcataagacaattgacttaaagaaaccatttccga 18397982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 198
Target Start/End: Complemental strand, 13016006 - 13015910
Alignment:
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||| |||||||||  |||||  | ||| ||||||||||||||||||    
T  13016006 ccaatacaatcattcattcatacaacttcacttagtcatataggaat-atcataacaattcataagacaattggtttaag-aaacatttccgaccaaaa 13015910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 25903975 - 25904033
Alignment:
Q  92 catcatatccaatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  25903975 catcatattcaatacaatcattcattcatacaacttcacttagtcatacaagaataatc 25904033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16827178 - 16827138
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16827178 aatgtcattcaacatcaactatcacatatagtttcaccatt 16827138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 28196074 - 28195924
Alignment:
Q  7 attcaacatcaactatcacatatagtttcaccatt--caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatccaa 103  Q
    ||||||| |||||||   |||||||||| ||||||  |||| |||  ||||||||||||||||| | |||||| ||   ||||||||||||||| |||||    
T  28196074 attcaacctcaactacttcatatagttttaccattttcaagcatttcttacatcctaagtaagagatcatacaacaacccatgataaacatcatgtccaa 28195975  T
Q  104 taca--atcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    || |  |||| | ||||||||||| ||||||| ||||||||||||| ||||    
T  28195974 tatataatcaattattcatacaacctcacttagtcatataagaatagtcac 28195924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 16301178 - 16301107
Alignment:
Q  15 tcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcat 85  Q
    |||||||||||||||||||||||| || |||| |||| |||||| |||||||||||| ||||||||| ||||    
T  16301178 tcaactatcacatatagtttcaccaatacaagcattccttacattctaagtaagataacatacacatctcat 16301107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4989757 - 4989797
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  4989757 aatgtcatccaacatcaactatcacatatagtttcaccatt 4989797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13016088 - 13016008
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacat 80  Q
    ||||||| |||||||||| || ||||| | ||||||||| |||||| |||  ||||||||||||||||||||||||| |||    
T  13016088 aatgtcactcaacatcaattaccacatgtggtttcaccaattcaagcatttcttacatcctaagtaagatagcatactcat 13016008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 18825059 - 18825023
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  18825059 tcattcaacatcaactatcacatatagtttcaccatt 18825023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15736483 - 15736440
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaa 44  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  15736483 aatgtcattcaacatcaactatatcatatagtttcaccattcaa 15736440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 16239227 - 16239262
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttca 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  16239227 aatgtcattcaacatcaactatcacatatagtttca 16239262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 18843117 - 18843083
Alignment:
Q  7 attcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||    
T  18843117 attcaacatcaactatcacatatagtttcaccatt 18843083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14627912 - 14627871
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  14627912 aatgtcattcaacatcaactatatcatatagtttcaccattc 14627871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 15861597 - 15861642
Alignment:
Q  7 attcaacatcaactatcacatatagtttcacca-ttcaagtattct 51  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||    
T  15861597 attcaacatcaactatcacatatagtttcaccagttcaagcattct 15861642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16230442 - 16230483
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  16230442 aatgtcattcaacatcaactatatcatatagtttcaccattc 16230483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18004275 - 18004234
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  18004275 aatgtcattcaacatcaactatatcatatagtttcaccattc 18004234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25174414 - 25174455
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  25174414 aatgtcattcaacatcaactatatcatatagtttcaccattc 25174455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27655389 - 27655348
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  27655389 aatgtcattcaacatcaactatatcatatagtttcaccattc 27655348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 71755 - 71539
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||| |||  |||||| |||||||||||||| ||||||| ||||||||||||| |||||    
T  71755 aatgtcattcaacatgaactattacatttagtttcaccattcaagcatttcttacattctaagtaagatagcgtacacatctcatgataaacattatatc 71656  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  71655 caatacaatcattcattcatataacttaacttagtcatataagaataataacaatcattcataaggtaattgactcaagaaaacatttccgaccaaaacc 71556  T
Q  201 cgtatcaagtggcaacc 217  Q
     ||||||||||||||||    
T  71555 tgtatcaagtggcaacc 71539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 148; Significance: 3e-78; HSPs: 6)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 256211 - 256001
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  256211 aatgtcattcaacttcaactatcacatatagtttcaccattcaagcattccttacatcctaagtaagatagcatacacatctcatgataaacatcatatc 256112  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||  ||||||| |||||||||  ||||| |||||| ||||||||||||||||||||    
T  256111 caatacaatcattcattcatacaacttaacttagtcatataaaaatggtcacaacaattcataagacaattggctcaag-aaacatttccgaccaaaaac 256013  T
Q  201 cgtatcaagtgg 212  Q
    | ||||||||||    
T  256012 catatcaagtgg 256001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 262817 - 262607
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  262817 aatgtcattcaacttcaactatcacatatagtttcaccattcaagcattccttacatcctaagtaagatagcatacacatctcatgataaacatcatatc 262718  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||  ||||||| |||||||||   ||||  ||||| ||||||||||||||||||||    
T  262717 caatacaatcattcattcatacaacttaacttagtcatataaaaatggtcacaacaattcataagactattggttcaag-aaacatttccgaccaaaaac 262619  T
Q  201 cgtatcaagtgg 212  Q
    | ||||||||||    
T  262618 catatcaagtgg 262607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 124591 - 124454
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    |||||||||||||||||||||||||||||||||| ||||||   ||||| |||| ||||||||||||||||||  || |||||||||| |||||||||||    
T  124591 tcattcaacatcaactatcacatatagtttcacccattcaacatttctt-acattctaagtaagatagcataccaatctcatgataaatatcatatccaa 124493  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataa 142  Q
     | |||||| |||||||||| ||||||||| | ||||||    
T  124492 aataatcatccattcatacatcttcacttagttatataa 124454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 75992 - 75855
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    |||||||||||||||||||||||||||||||||| ||||||   ||||| |||| |||||||||||  |||||| || |||||||||| |||||||||||    
T  75992 tcattcaacatcaactatcacatatagtttcacccattcaacatttctt-acattctaagtaagattacatacatatctcatgataaatatcatatccaa 75894  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataa 142  Q
     | |||||| |||||||||| || |||||| | ||||||    
T  75893 aataatcatccattcatacatctgcacttagttatataa 75855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 193515 - 193582
Alignment:
Q  75 acacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||    
T  193515 acacatctcatgataaacatcatatccaatataatcattcattcatacaacttcaattagttatataa 193582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 193470 - 193508
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  193470 aatgtcattcaacatcaactaccacatatcgtttcacca 193508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 6663 - 6453
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||    
T  6663 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattctttacattctaagtaagatagcatacacatctcatgatacacatcatatc 6564  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||| ||||||||||||||||||||||||||||| | |||||| |||  ||||||| |||||||||  ||||| || ||| || |||||||||||||||||    
T  6563 caaaacaatcattcattcatacaacttcacttagttatataaaaatggtcacaacaattcataagacaattggcttaag-aaccatttccgaccaaaaac 6465  T
Q  201 cgtatcaagtgg 212  Q
    | ||||||||||    
T  6464 catatcaagtgg 6453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 44864102 - 44864316
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  44864102 aatgtcattcaacatcaactatcacatatactttcaccattcaagtattccttacattccaagtaagatagcatacacatttcatgataaacatcatatc 44864201  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
      |||||||||||| |||||||||| ||||||| ||||||||||||| ||||||  ||||| |||  |||||||||||| |||||||||||||||||||     
T  44864202 gcatacaatcattctttcatacaacgtcacttagtcatataagaatagtcacaataattcacaagacaattgactcaag-aaacatttccgaccaaaaat 44864300  T
Q  201 cgtatcaagtggcaac 216  Q
    | || |||||||||||    
T  44864301 cataccaagtggcaac 44864316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 12753740 - 12753958
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||| |||| |||| ||||||||||||||||||    
T  12753740 aatgtcattcaacatcaactatcacatatagtttcaccatttcaagcattatttacattctaagtaagataacatatacatctcatgataaacatcatat 12753839  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| |||||||| | |||||||  |||||||||||| |||||||||||||| ||||    
T  12753840 ccaatacaatcattcaatcatacaacttcacttagtcatataagaatgatcacaacaaatcataagacaattgactcaag-aaacatttccgacc-aaaa 12753937  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
     | ||||||||||||| ||||    
T  12753938 tcatatcaagtggcaaacggc 12753958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 125685 - 125892
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||| ||||||||||    
T  125685 aatgtcattcaacatcaactatcacatttagtttcaccaattcaaacattccttacattcta-gtaagatagcatacacatctcatgattaacatcatat 125783  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    | |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||||| |||||     
T  125784 caaatacaatcattcattcatacaacttcacttagtcatacaagaataatcacaaccattcatgaggtaattgactcaataaaacatctccgatcaaaac 125883  T
Q  200 ccgtatcaa 208  Q
    || ||||||    
T  125884 ccatatcaa 125892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 3893952 - 3894173
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  3893952 aatgttattcaacatcaactatcacatatagtttcaccacttcaagcatttcttacatcctaagtaagatagcgtacacatctcatgataaatatcatat 3894051  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||||  |||||||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||  ||||| |||||| |||||||||||||||||    
T  3894052 ccaaaatacaatcattcattcatacaacttcacttagtcatacaagaatggtcacaacaattcataagacaattggctcaag-aaacatttccgaccaaa 3894150  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
    |||| ||||||||||| ||||||    
T  3894151 aaccatatcaagtggccaccggc 3894173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 47288634 - 47288852
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||  |||||||||||||||||| || |||||||||||||||||||    
T  47288634 aatgtcattcaacatcaactatcacatatggtttcaccattcaagcattccttacattataagtaagatagcatacatatctcatgataaacatcatatc 47288733  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||||||||| | |||||| |||  |||| || |||| |||   |||||  |||| |||||||||||||||||||||    
T  47288734 caatacaatcattcattcatacaacttcacttatttatataaaaatggtcaccacaattcttaaaacaattggttcaa-aaaacatttccgaccaaaaac 47288832  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    ||| ||||||||||| ||||    
T  47288833 cgtgtcaagtggcaaacggc 47288852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 14252491 - 14252277
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||| |||||||||||||||||||||| |    
T  14252491 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatgcacatctcatgataaacatcatatccaaaa 14252392  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    |||||||||||||||||||||||||||| | ||||||  |||  ||| || |||| ||||  |||||  |||| |||| ||||||||| |||||||||||    
T  14252391 caatcattcattcatacaacttcacttagttatataaacatagccaccacaattcttaagacaattggttcaaaaaaatatttccgactaaaaaccgtat 14252292  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  14252291 caagtggcaaacggc 14252277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 15851185 - 15851334
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||||     
T  15851185 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatt 15851284  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  15851285 caatacaatcattcattcatacaacttcacttagtcatacaagaataatc 15851334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 12545017 - 12544801
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||| |||||| ||| |||||||||||||||||  ||||||||||||||||||    
T  12545017 aatgtcattcaacatcaactatcaaatatagtttcaccatttcaagcattcattacattcta-gtaagatagcatacacacctcatgataaacatcatat 12544919  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    || ||||||||||||| | |||||||||||| || ||||||||||||  ||||||| |||||||||  ||||| |||||| |||||||||||||||||||    
T  12544918 ccgatacaatcattcaataatacaacttcacctagtcatataagaatggtcacaacaattcataagacaattggctcaag-aaacatttccgaccaaaaa 12544820  T
Q  200 ccgtatcaagtggcaaccg 218  Q
    || ||||||||||| ||||    
T  12544819 ccatatcaagtggccaccg 12544801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 369746 - 369965
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||| || ||||||||||||||||||||||||||||||| |||| |||| |||||| |||||||||||  |||||| || ||||||||||||||||||    
T  369746 aatgtcctttaacatcaactatcacatatagtttcaccatttcaagcattccttacattctaagtaagatcacatacatatctcatgataaacatcatat 369845  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| |    
T  369846 ccaatacaatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaaga 369944  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    |||| ||||||||||| ||||    
T  369945 ccgtgtcaagtggcaaacggc 369965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 11286072 - 11286247
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||  |||| ||| || |||||||||||| ||||||||| |||||||| |||||||||    
T  11286072 aatgtcattcaacatcaactatctcatatagtttcaccatttcaatcattccttatattctaagtaagataacatacacatctcatgatacacatcatat 11286171  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgact 175  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  11286172 ccaatacaatcattcatttatacaacttcacttagtcatataagaatagtcacaacaattcataaggtaattgact 11286247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 15823711 - 15823514
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  15823711 aatgttatccaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgagaaacatcatatc 15823612  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
      ||||||||||||| |||||| |||||||||| ||||| ||||||| ||||||| ||||| ||   ||||  |||||||||||||||||||||||||    
T  15823611 ttatacaatcattcactcatacgacttcacttagtcatacaagaatagtcacaacaattcacaaaacaattagctcaagaaaacatttccgaccaaaa 15823514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 16417436 - 16417580
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| ||||||||| |||||||||||||||||| |||||    
T  16417436 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacacatctcatgataaacatcatattcaata 16417535  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  16417536 caatcattcattcatacaacttcacttagtcatacaagaataatc 16417580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 45453561 - 45453346
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||| |||| |||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  45453561 aatgtcattcaacatcaactattacatataattttcccattcaagcattccttacattctaagtaagataatatacacatttcatgataaacatcatatc 45453462  T
Q  101 c-aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    | |||| ||||| ||||||||||||||| ||||| ||||||||||||  ||||||| | |||||||  ||||| |||||||| |   |||||||||||||    
T  45453461 caaatataatcactcattcatacaactttacttagtcatataagaatggtcacaacaaatcataagacaattggctcaagaaca---ttccgaccaaaaa 45453365  T
Q  200 ccgtatcaagtggcaaccg 218  Q
    |||||||||||||||||||    
T  45453364 ccgtatcaagtggcaaccg 45453346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 112600 - 112381
Alignment:
Q  3 tgtcattcaacatcaactatcacatatagtttcaccat-tcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc 101  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||  |||||||||||||||||||||||||| || |||||||||  |||||||||    
T  112600 tgtcattcaacatcaactatcacatatagtttcaccaaatcaagcatttcttacatcctaagtaagatagcatacatatctcatgataattatcatatcc 112501  T
Q  102 aa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    ||  ||||| ||||||||| |||||||||||||| ||||| ||||||  ||||||| |||||||||  ||||| |||||| |||||||||||| ||||||    
T  112500 aaaatacaaccattcattcgtacaacttcacttagtcatacaagaatggtcacaacaattcataagacaattggctcaag-aaacatttccgaacaaaaa 112402  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||||    
T  112401 ccatatcaagtggccaccggc 112381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 26071571 - 26071396
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| |||||||||||||| || |||| |||  |||||| ||||  ||||||||||||||||  |||||||||||||||||    
T  26071571 aatgtcattcaacattaactatctcatatagtttcaccgtttcaagcatttcttacattctaatcaagatagcatacacatcacatgataaacatcatat 26071472  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgact 175  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||  |||||||||||||||||||    
T  26071471 ccaatacaatcattcattcatacaacttcacttagtcatataagagtaatcacaataattcataaggtaattgact 26071396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 26095358 - 26095183
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| |||||||||||||| || |||| |||  |||||| ||||  ||||||||||||||||  |||||||||||||||||    
T  26095358 aatgtcattcaacattaactatctcatatagtttcaccgtttcaagcatttcttacattctaatcaagatagcatacacatcacatgataaacatcatat 26095259  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgact 175  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||  |||||||||||||||||||    
T  26095258 ccaatacaatcattcattcatacaacttcacttagtcatataagagtaatcacaataattcataaggtaattgact 26095183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 142487 - 142708
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||  |||  ||||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  142487 aatgttattcaacatcaactatcacatatagtttcaccaattcaaacatttcttacatcctaagtaagataacatacccatctcatgataaatatcatat 142586  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||  ||||||||||| |||||||||||||||||||| ||||| ||||||| | ||  |  ||||||||  ||||| |||||| ||||||||| |||||||    
T  142587 ccaaaatacaatcatccattcatacaacttcacttagtcatacaagaatagtaacctcagttcataagacaattggctcaag-aaacatttctgaccaaa 142685  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
    |||||| ||||||||||| ||||    
T  142686 aaccgtgtcaagtggcaaacggc 142708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 32495747 - 32495532
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||| |||||||||||| |||||| || ||||||||||||||||||||  ||    
T  32495747 cattcaacatcaactatcacatatagtttcaccatccaagcattccttacattctaagtaagataacatacatatctcatgataaacatcatatccaaaa 32495648  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgt 203  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||||||||||  | ||| |||  ||||  |||||| ||||||||||||| |||| ||      
T  32495647 tataatcactcattcatacaacttcacttagtcatacaagaataatcacaataactcacaagacaatttgctcaag-aaacatttccgacaaaaatccaa 32495549  T
Q  204 atcaagtggcaaccggc 220  Q
    |||| ||||||| ||||    
T  32495548 atcatgtggcaaacggc 32495532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 15952280 - 15952144
Alignment:
Q  14 atcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaatcatt 113  Q
    |||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| || |||||||||||||||||| |||||||| ||||    
T  15952280 atcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatattcaatacaaacatt 15952181  T
Q  114 cattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||||||||||||| |||| ||||| ||||||||||    
T  15952180 cattcatacaacttcgcttagtcatacaagaataatc 15952144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 13912305 - 13912155
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  13912305 cattaaacatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 13912206  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  13912205 tataatcactcattcatacaacttcacttagtcatacaagaataatcacaa 13912155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 145
Target Start/End: Original strand, 7291825 - 7291966
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  7291825 cattcaacatcaactaacacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 7291924  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaa 145  Q
    ||||||||||||||||||||||||||| || ||||| |||||    
T  7291925 tacaatcattcattcatacaacttcacgtagtcatacaagaa 7291966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13867379 - 13867163
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||| || ||||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||| |||||||||| |||||||||||||||||||    
T  13867379 aatgttatccaacatcaactatcacatatagtttcatcattcaagaattccttacattctaagtaagattgcatacacatctcatgataaacatcatatc 13867280  T
Q  101 c--aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaaga-aaacatttccgaccaaa 197  Q
    |  || ||||||||||||||||||||||||| ||  |||||||||||||||||| |  |||||||||  ||||| || || | || |||||||| |||||    
T  13867279 caaaaaacaatcattcattcatacaacttca-ttggtcatataagaataatcacgataattcataagacaattggcttaaaagaatcatttccggccaaa 13867181  T
Q  198 aaccgtatcaagtggcaa 215  Q
    || | ||||||| |||||    
T  13867180 aatcatatcaagcggcaa 13867163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 11515198 - 11515345
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--a 102  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||| |||||| || |||||||||||||| |||||  |    
T  11515198 tcattcaacatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagataacatacatatctcatgataaacatcgtatccaaa 11515297  T
Q  103 atacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||| ||||| ||||||||||||||||||||| ||||| ||||||||||    
T  11515298 atataatcactcattcatacaacttcacttagtcatacaagaataatc 11515345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 2027529 - 2027742
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccat-tcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    ||||||||||||||||||||||||||||||||||  ||||   ||||| |||| |||||||| |||| |||||||| ||||||||| |||||||||  ||    
T  2027529 cattcaacatcaactatcacatatagtttcaccaactcaacatttctt-acattctaagtaaaatagtatacacatctcatgataatcatcatatctcat 2027627  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgta 204  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||  ||||||| |||||     
T  2027628 acaatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttttgaccaaagaccgtg 2027726  T
Q  205 tcaagtggcaaccggc 220  Q
    ||||||||||| ||||    
T  2027727 tcaagtggcaaacggc 2027742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 7285510 - 7285361
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--a 102  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| || ||| ||||||||||||||||  |    
T  7285510 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacatatctcaagataaacatcatatccaaa 7285411  T
Q  103 atacaatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    ||| || |||||||||| ||| ||||||||| ||||||||| ||| ||||    
T  7285410 atataaccattcattcacacatcttcacttagtcatataaggatagtcac 7285361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 12249417 - 12249263
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||| | |||||||||| |||||| |||| |||  ||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  12249417 aatgtcattcaacatcaactacctcatatagttttaccatttcaagcatttcttacatcctaagtaagataacatacacatcttatgataaacatcatat 12249318  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    ||  |||||||||||||||||||||||||| | ||| |||||| |||||| ||||    
T  12249317 ccaaaatacaatcattcattcatacaactttagttagtcatatgagaatagtcac 12249263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36051522 - 36051624
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| | || |||||||||||||||||||    
T  36051522 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatatatatctcatgataaacatcatatc 36051621  T
Q  101 caa 103  Q
    |||    
T  36051622 caa 36051624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 18981212 - 18981044
Alignment:
Q  1 aatgtcattcaa-catcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcata 98  Q
    |||||||||||| ||||||||||||||||||||||||| | |||||  |||| ||||||| |||||||||| |||||||| | |||||||||  ||||||    
T  18981212 aatgtcattcaatcatcaactatcacatatagtttcacaaattcaaacattccttacatcttaagtaagatggcatacacctctcatgataattatcata 18981113  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||||  ||||||||| |||||||||||||||||||| ||||| ||||||  ||||||| |||||||||    
T  18981112 tccaaaatacaatcatccattcatacaacttcacttagtcatacaagaatggtcacaacaattcataag 18981044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 39047996 - 39047785
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||| |||||||||||||||||||||||||||||||||| |||||  |||  |||| |  ||||||  ||||||||||||| |||||||||| |||||||    
T  39047996 aatgccattcaacatcaactatcacatatagtttcaccaattcaaacatttcttactttataagtataatagcatacacatctcatgataaatatcatat 39047897  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||| ||||||||||||||||||||||||||||| | ||||||  |||  |||  | |||| ||||  |||||  ||||| ||||||||||||| |||||    
T  39047896 ccaaaacaatcattcattcatacaacttcacttagttatataaacatagccaccgcaattcttaagacaattggttcaag-aaacatttccgactaaaaa 39047798  T
Q  200 ccgtatcaagtgg 212  Q
      |||||||||||    
T  39047797 ttgtatcaagtgg 39047785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 13757437 - 13757603
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||  | || | |||||| |||||||||| || |||||||||||||||| |    
T  13757437 aatgtcattcaacatcaactatcacatatagtttcaccattgcaagcattctc-atattccaagtaatatagcatacatatctcatgataaacatcatgt 13757535  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||  || ||||| ||||||||||||||||||||| ||||| ||||||  ||||||  |||||||||    
T  13757536 ccaaaatataatcactcattcatacaacttcacttagtcatagaagaatggtcacaataattcataag 13757603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 13273612 - 13273833
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||| ||||||||||||||| | |||||||||| |||||| |||| |||  |||||| |||||||||| | |||||| |||  ||||||||||||||||    
T  13273612 aatgtaattcaacatcaactaactcatatagttttaccatttcaagcatttcttacattctaagtaagagaacatacaacatcccatgataaacatcata 13273711  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaa 196  Q
    |||||  || ||||||||||||||||||||| ||||| ||||||||||||| |||| |  |||||||||   |||||| |||   ||||||| ||||  |    
T  13273712 tccaacatataatcattcattcatacaactttacttagtcatataagaatagtcacgataattcataagcagattgacacaaaggaacattttcgac--a 13273809  T
Q  197 aaaccgtatcaagtggcaaccggc 220  Q
    | ||||||||||||||||| ||||    
T  13273810 ataccgtatcaagtggcaaacggc 13273833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 49049097 - 49048942
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||| | |||| ||||| |||||| |||| |||  |||||| |||||||||| | |||||| |||  ||||||||||||||||    
T  49049097 aatgtcattcaacatcaactacctcatacagttttaccatttcaagcatttcttacattctaagtaagagaacatacaacatcccatgataaacatcata 49048998  T
Q  99 tccaataca--atcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    ||||| |||  |||||||||||||||||||||||||| ||||||||||||| ||||    
T  49048997 tccaacacataatcattcattcatacaacttcacttagtcatataagaatagtcac 49048942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 15629640 - 15629860
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||||| |||||||||| | |||| |||| |||  |||||| |||||||||| | |||||| |||| |||||||||||| |||    
T  15629640 aatgtcattcaacatcaactatctcatatagttttatcatttcaagcatttcttacattctaagtaagagaacatacaacattccatgataaacattata 15629739  T
Q  99 tccaataca-atcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    | ||| | | ||||||||||||||| |||||||||| ||||||||||||| |||| |  | |||||||    |||||||||   |||||||||||||  |    
T  15629740 ttcaacatatatcattcattcataccacttcacttagtcatataagaatagtcacgataaatcataagtcggttgactcaaaggaacatttccgacc--a 15629837  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
     ||||||||||||||||| ||||    
T  15629838 taccgtatcaagtggcaaacggc 15629860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 16571394 - 16571246
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| |||||||||| |||||| |||| |||||| |||| |||||||||| | ||||||||| ||||||||  ||||||||    
T  16571394 aatgtcattcaacattaactatctcatatagttttaccatttcaagcattctt-acattctaagtaagagaacatacacatctcatgatattcatcatat 16571296  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaata 147  Q
    ||||  || |||||||| |||||||||||||||||| | |||||||||||    
T  16571295 ccaacatataatcattctttcatacaacttcacttagtgatataagaata 16571246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16594268 - 16594416
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| |||||||||| |||| |||||| |||| |||||| |||||||||| | ||||||||| ||||||||  ||||||||    
T  16594268 aatgtcattcaacattaactatctcatatagttttaccatttcaagcattc-ttacattctaagtaagagaacatacacatctcatgatattcatcatat 16594366  T
Q  100 cca--atacaatcattcattcatacaacttcacttaatcatataagaata 147  Q
    |||  ||| |||||||| |||||||||||||||||| | |||||||||||    
T  16594367 ccaacatataatcattctttcatacaacttcacttagtgatataagaata 16594416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 1938076 - 1937973
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  1938076 aatgtcattcaacatcaactatcacatatagtttcaccaattcaac-attccttacattcta-gtaagatagcatacacatctcatgataaacatcatat 1937979  T
Q  100 ccaata 105  Q
    ||||||    
T  1937978 ccaata 1937973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 7285603 - 7285504
Alignment:
Q  16 caactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaatcattc 114  Q
    |||||||||||||||||||||||| | |||| |||  ||||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||||||||||    
T  7285603 caactatcacatatagtttcaccaatacaagcatttcttacatcctaagtaagatagcatactcatctcatgat-aacatcatattcaatacaatcattc 7285505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 10862144 - 10861927
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatcca 102  Q
    ||||||||||||||||||  |||||||||| |||||| ||||||||  | |||| |||||||||||| |||||| ||| |||||| ||| ||||||| ||    
T  10862144 tcattcaacatcaactatt-catatagttttaccatttcaagtatttctcacattctaagtaagataacatacaacatctcatgacaaatatcatattca 10862046  T
Q  103 a--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    |  || || |||||||||| ||| ||||||||| ||||||||| ||| |||| |    ||||||| ||||||||||||   ||||||||||| |||  ||    
T  10862045 aaatataaccattcattcacacatcttcacttagtcatataaggatagtcacgatagatcataagataattgactcaaaggaacatttccga-caagtac 10861947  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    ||||||||||||||| ||||    
T  10861946 cgtatcaagtggcaaacggc 10861927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 16480120 - 16480034
Alignment:
Q  14 atcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||| || |||| |||||| |||||||||||| ||||| |||| ||||||||||||||||||    
T  16480120 atcaactatcacatatagtttcaccattcgagcattccttacattctaagtaagataacatacaacatctcatgataaacatcatat 16480034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 11582095 - 11582027
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| | ||||||    
T  11582095 tacacatttcatgataaacattatatccaatataatcattcattcatacaacttcacttagttatataa 11582027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 15442786 - 15442707
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  15442786 acatctcatgataaacatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 15442707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 30263351 - 30263272
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  30263351 acatctcatgataaacatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 30263272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 11515092 - 11515138
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattct 51  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  11515092 tcattcaacatcaactatcacatatagtttcaccattcaaggattct 11515138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 16210691 - 16210759
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||||| ||||||||| | | ||||||||||||||||||||||||||| | ||||||    
T  16210691 tacacatctcatgataaatatcatatcccacataatcattcattcatacaacttcacttagttatataa 16210759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32495859 - 32495819
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32495859 aatgtcattcaacatcaactatcacatatagtttcaccatt 32495819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 3048688 - 3048751
Alignment:
Q  102 aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||  ||||||| |||||||||    
T  3048688 aatacaatcatttattcatacaacttcacttagtcatacaagaatggtcacaacaattcataag 3048751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 13038350 - 13038299
Alignment:
Q  82 tcatgataaacatcatatccaatacaatcattcattcatacaacttcactta 133  Q
    |||||||||||||||||||| | | |||||||||||||||||||||||||||    
T  13038350 tcatgataaacatcatatcccacataatcattcattcatacaacttcactta 13038299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11582147 - 11582109
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11582147 aatgtcattcaacatcaactatcacatatagtttcacca 11582109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13038411 - 13038373
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13038411 aatgtcattcaacatcaactatcacatatagtttcacca 13038373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 2191769 - 2191684
Alignment:
Q  82 tcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||| ||||| |||||||||||  || ||||| ||||||||||||||||||||| ||||| ||||||  |||| || |||||||||    
T  2191769 tcataataaatatcatatccaaaatataatcactcattcatacaacttcacttagtcataaaagaatggtcaccacaattcataag 2191684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16210638 - 16210676
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  16210638 aatgtcattcaacatcaactatcacatataatttcacca 16210676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7291712 - 7291753
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  7291712 aatgtcattcaacatcaactatatcatatagtttcaccattc 7291753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15952401 - 15952360
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  15952401 aatgtcattcaacatcaactatatcatatagtttcaccattc 15952360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16417323 - 16417364
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  16417323 aatgtcattcaacatcaactatatcatatagtttcaccattc 16417364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16480241 - 16480200
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  16480241 aatgtcattcaacatcaactatatcatatagtttcaccattc 16480200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26010496 - 26010455
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  26010496 aatgtcattcaacatcaactatatcatatagtttcaccattc 26010455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 3058966 - 3059026
Alignment:
Q  82 tcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    |||||||| ||||||||||| | | |||||||| |||||||||||||||||| | ||||||    
T  3058966 tcatgatagacatcatatcccacataatcattcgttcatacaacttcacttagttatataa 3059026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 35093783 - 35093890
Alignment:
Q  112 ttcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatcaagtg 211  Q
    |||||||||||||||||||||| | ||||||  ||| |||| || |||| ||||  |||||  ||||| |||| |||  ||||||||||| |||||||||    
T  35093783 ttcattcatacaacttcacttagttatataaacatagtcaccacaattcttaagacaattggttcaag-aaacgtttttgaccaaaaaccatatcaagtg 35093881  T
Q  212 gcaaccggc 220  Q
    || ||||||    
T  35093882 gccaccggc 35093890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 36
Target Start/End: Original strand, 3058910 - 3058941
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttca 36  Q
    ||||||||||||||||||||||||||||||||    
T  3058910 tcattcaacatcaactatcacatatagtttca 3058941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15926223 - 15926261
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  15926223 aatgtcattcaacatcaactatatcatatagtttcacca 15926261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2027416 - 2027457
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||| ||||||||||||  ||||||||||||||||||    
T  2027416 aatgtcattgaacatcaactatatcatatagtttcaccattc 2027457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13912418 - 13912378
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||| |||||||||||||  |||||||||||||||||    
T  13912418 aatgtcatgcaacatcaactatatcatatagtttcaccatt 13912378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 133; Significance: 3e-69; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 26028 - 25809
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaac-atcatat 99  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||||| |||||||||||| ||||||||  ||||||||||| |||||||    
T  26028 aatgtcattcaacattaactatctcatatagtttcaccattcaagcattccttacattctaagtaagatatcatacacacctcatgataaacaatcatat 25929  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||| |||||||||  ||||| |||||| |||||||||||||||||||    
T  25928 ccaatacaatcattcaatcatacaacatcacttagtcatataagaatagtcacaacaattcataagacaattggctcaag-aaacatttccgaccaaaaa 25830  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||||    
T  25829 ccatatcaagtggccaccggc 25809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 70700 - 70486
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  70700 aatgtcattcaacatcaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaagatagtgtacacatctcatgataaacatcatat 70601  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||| |||||||||  ||||| |||||| | |||||  ||||||||||    
T  70600 ccaatacaatcattcaatcatacaacttcacttagtcatataagaatggtcacaacaattcataagacaattggctcaag-atacattctcgaccaaaaa 70502  T
Q  200 ccgtatcaagtggcaa 215  Q
    |||| |||||||||||    
T  70501 ccgtgtcaagtggcaa 70486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 93560 - 93701
Alignment:
Q  7 attcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||| |||||||||||||||||||| |||||| |||  |||||| ||||||||||||||| |||||| ||||||||| |||||||||  |||    
T  93560 attcaacatcaattatcacatatagtttcaccaattcaagcatttcttacattctaagtaagatagcacacacatctcatgataatcatcatatctcata 93659  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaata 147  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  93660 caatcattcattcatacaacttcacttagccatataagaata 93701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 21393047 - 21393265
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||| ||||||    
T  21393047 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtactccttacattctaagtaagatcgcatacacatttcatgataaacaacatatc 21393146  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
      |||||||||||| |||||||||| ||||||| || |||||||||| ||||||  |||||||||  |||||||||||| ||||| ||||||||||||||    
T  21393147 tcatacaatcattctttcatacaacgtcacttagtcttataagaatagtcacaataattcataagacaattgactcaag-aaacaattccgaccaaaaac 21393245  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    | || |||||||||| ||||    
T  21393246 cataccaagtggcaaacggc 21393265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 9731975 - 9731762
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  |||||| || ||||||||||||||||||||||||    
T  9731975 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatcacatacatatctcatgataaacatcatatccaata 9731876  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| ||||| |    
T  9731875 caatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaagaccgtgt 9731777  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  9731776 caagtggcaaacggc 9731762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 28258460 - 28258669
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||  |||||||||||||||||||| |||||||||||||||||||    
T  28258460 aatgtcattcaacatcaactatcacatatagtttcaccattcaatcattccttacatctcaagtaagatagcatacacatctcatgataaacatcatatc 28258559  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||| ||||||||||||||||||||||||||||| ||||||||||||| |||| ||  || ||||   ||||| |||||| |||||||||||||| |||||    
T  28258560 caacacaatcattcattcatacaacttcacttagtcatataagaatagtcaccacagtttataatacaattggctcaag-aaacatttccgacc-aaaac 28258657  T
Q  201 cgtatcaagtgg 212  Q
    | ||||||||||    
T  28258658 catatcaagtgg 28258669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 1169815 - 1169602
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  |||||| || ||||||||| |||||||||    
T  1169815 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatgacatacatatctcatgataatcatcatatc 1169716  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| | |||||||  ||||| |||||| ||||||||||||| |||| |    
T  1169715 caatacaatcattcattcatacaacttcacttagtcatacaagaataatcataacaaatcataagacaattggctcaag-aaacatttccgacaaaaatc 1169617  T
Q  201 cgtatcaagtggcaa 215  Q
    |  |||| |||||||    
T  1169616 caaatcatgtggcaa 1169602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 23510859 - 23511044
Alignment:
Q  13 catcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaatca 111  Q
    ||||||||||||||| |||||||||| ||||||  |||| |||||| ||| |||| ||| ||||||||| |||||||||||||||||||||||||| |||    
T  23510859 catcaactatcacatttagtttcaccgattcaaacattccttacattcta-gtaatataacatacacatctcatgataaacatcatatccaatacattca 23510957  T
Q  112 ttcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  23510958 ttcattcatacaacttcacttaatcatacaagaataatcacaaccattcataaggtaattgactcaagaaaacctctccgatcaaaa 23511044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 10779489 - 10779344
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  10779489 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaat 10779390  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  10779389 acaatcattcattcatacaacttcacttagtcatacaagaataatc 10779344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 11318 - 11462
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  11318 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaata 11417  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  11418 caatcattcattcatacaacttcacttagtcatacaagaataatc 11462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16535164 - 16535313
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||  |||||| |||||||||||||||||||||| ||||||||||||||||||     
T  16535164 aatgtcattcaacatcaactatcacatatagtttcaccatttaagcatttcttacattctaagtaagatagcatacacatctcatgataaacatcatatt 16535263  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  16535264 caatacaatcattcattcatacaacttcacttagtcatacaagaataatc 16535313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 20710995 - 20711214
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaaca-tcata 98  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||| ||| |||||||| ||||||||  |||||||||||| |||||    
T  20710995 aatgtcattcaacatcaattatcacatatagtttcaccatttcaagcattcattacattcta-gtaagatatcatacacacctcatgataaacaatcata 20711093  T
Q  99 tccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||||   |||||| |||||||||  ||||| |||||| ||||||||||||||||||    
T  20711094 tccaacacaatcattcaatcatacaacttcacttagtcatataagaatgggcacaacaattcataagacaattggctcaag-aaacatttccgaccaaaa 20711192  T
Q  199 accgtatcaagtggcaaccggc 220  Q
    ||| ||||||||||| ||||||    
T  20711193 accatatcaagtggccaccggc 20711214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 29191929 - 29191785
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  29191929 cattcaacatcaactatcacatatagtttcaccattcaagcgttccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaata 29191830  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  29191829 caatcattcattcatacaacttcacttagtcatacaagaataatc 29191785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 17473042 - 17472823
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||  ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  17473042 aatgtcattcaacatcaactatcacatatagtttcaccaatacaagcatttcttacatcctaagtaagatagcatactcatctcatgataaacatcatat 17472943  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
     ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||  | ||| |||  ||||| |||||| ||||| ||||||| ||||     
T  17472942 tcaatacaatcattcattcatacaacttcacttagtcatataagaatggtcacaataactcacaagacaattggctcaag-aaacacttccgacaaaaat 17472844  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    ||  |||| ||||||| ||||    
T  17472843 ccaaatcatgtggcaaacggc 17472823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 11582846 - 11583055
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||| || ||||||||||||||||||||||||    
T  11582846 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacatatctcatgataaacatcatatccaata 11582945  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactc-aagaaaacatttccgaccaaaaaccgta 204  Q
    |||||||||||||| ||| ||||||||| ||||||||| ||| |||| |    |||||||  |||||  || ||| |||||||||| | |||||||||||    
T  11582946 caatcattcattcacacatcttcacttagtcatataaggatagtcacgatagatcataagaaaattggttcaaaggaaacatttcc-aacaaaaaccgta 11583044  T
Q  205 tcaagtggcaa 215  Q
    |||||||||||    
T  11583045 tcaagtggcaa 11583055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 4864126 - 4864343
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||  ||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  4864126 aatgtcattcaacatcaactatcacatatagtttcaccaatacaagcatttcttacatcctaagtaagataacatacacatctcatgataaatatcatat 4864225  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||| ||||||||||||||||||||||||||||| | ||||||  ||| |||| ||||| | ||||  |||||  |||||  ||||||| ||||||||||    
T  4864226 ccaaaacaatcattcattcatacaacttcacttagttatataa-catagtcaccaccatccttaagacaattggttcaag--aacattttcgaccaaaaa 4864322  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||||    
T  4864323 ccatatcaagtggccaccggc 4864343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 110292 - 110145
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  110292 tcattcaacatcaactatcacatacagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatggtaaacatcatatccaat 110193  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    || |||||||||||| ||| ||||||||| ||||||||| ||| ||||    
T  110192 acgatcattcattcacacatcttcacttagtcatataaggatagtcac 110145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 24184515 - 24184295
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||  |||| ||||| ||||||||||| |||| |||| |||||| |||||||||||||||||||||  ||||||||||||||||||    
T  24184515 aatgtcattcaacatcatttatctcatatggtttcaccatttcaagcattccttacattctaagtaagatagcatacacaactcatgataaacatcatat 24184416  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||  ||||||| |||||||| ||||||||||||||| ||||| |||||| |||||||  | |||||||  ||||| |||||| || ||||||||||| ||    
T  24184415 ccaaaatacaagcattcatttatacaacttcacttagtcatacaagaatgatcacaataactcataagacaattggctcaag-aagcatttccgacc-aa 24184318  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
    |||||||||||||||||| ||||    
T  24184317 aaccgtatcaagtggcaaacggc 24184295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 1221040 - 1220890
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||||||||||||||||||||||||||||||||||  ||| |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  1221040 cattcaacatcaactatcacatatagtttcaccatctaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 1220941  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  1220940 tataatcactcattcatacaacttcacttagtcatacaagaataatcacaa 1220890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 4201274 - 4201124
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  4201274 cattaaacatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 4201175  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  4201174 tataatcactcattcatacaacttcacttagtcatacaagaataatcacaa 4201124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 198
Target Start/End: Complemental strand, 27185023 - 27184830
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  27185023 cattcaacatcaactatcacatatagtttcaccattcaaacattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 27184924  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||  ||||||  | ||| |||  |||||||| ||| ||||||||||||| ||||    
T  27184923 tataatcactcattcatacaacttcacttagtcatacaagaatggtcacaataactcacaagacaattgactaaag-aaacatttccgacaaaaa 27184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 19404440 - 19404588
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||| |||||||||| |||| |||  |||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  19404440 aatgtcattcaacatcaactatcacatataatttcaccatttcaagcatttcttacattctaagtaagatagcatacacatctcatgataa-catcatat 19404538  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaata 147  Q
    ||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  19404539 ccaaaatacaatcattcattcatacaacttcacttagtcatataagaata 19404588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 21652704 - 21652485
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||  |||| |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  21652704 aatgtcattcaacattaactatcacgtatagtttcaccaattcaaacattccttacatcctaagtaagatagcatatacatctcatgataaacatcatat 21652605  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
     |||  |||||||||||||||||||||||||  ||| | |||||| ||||  ||| || |||| |||| ||||||  |||||  ||||||| ||||||||    
T  21652604 tcaaactacaatcattcattcatacaacttcttttagttatataaaaatagccaccacaattcttaagataattggttcaag-gaacattttcgaccaaa 21652506  T
Q  198 aaccgtatcaagtggcaaccg 218  Q
    |||| ||||||||||| ||||    
T  21652505 aaccatatcaagtggccaccg 21652485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 23513767 - 23513977
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa-- 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||| ||| || ||||| ||||||||||||||||      
T  23513767 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcacacatatctcatggtaaacatcatatccaaag 23513866  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgt 203  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||  ||||||| | ||| |||  ||||| || ||| ||||||||||||| |||| ||      
T  23513867 tataatcactcattcatacaacttcacttagtcatacaagaatggtcacaacaactcacaagacaattggctaaag-aaacatttccgacaaaaatccaa 23513965  T
Q  204 atcaagtggcaa 215  Q
    |||| |||||||    
T  23513966 atcatgtggcaa 23513977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 18779301 - 18779155
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||||||||||||||  ||||||||||||||||||||||  |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  18779301 cattcaacatcaacttccacatatagtttcaccattcaaccattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 18779202  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||||| ||||| |||| |||||    
T  18779201 tacaatcattcattcatacaacttcacttagtcatacaagagtaatc 18779155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 21649689 - 21649855
Alignment:
Q  2 atgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||  |||| ||||||| ||||||||||||||||||| | |||||||||  ||||||||    
T  21649689 atgtcattcaacatcaactatcacatatagtttcaccaattcaaacattccttacatcttaagtaagatagcatacacttctcatgataattatcatatc 21649788  T
Q  101 caa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||  |||||||||||||||||||||||| ||||| ||||| ||||||  ||||||| |||||||||    
T  21649789 caaaatacaatcattcattcatacaactttacttagtcatacaagaatggtcacaacaattcataag 21649855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 25425589 - 25425732
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcatatccaa- 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| ||||| |||| ||||||||||||||||||||||     
T  25425589 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacaacatctcatgataaacatcatatccaaa 25425688  T
Q  104 -tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
     || ||||| ||||||||||||||||||||| ||||| ||||||    
T  25425689 gtataatcactcattcatacaacttcacttagtcatacaagaat 25425732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 11338165 - 11338021
Alignment:
Q  4 gtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcca 102  Q
    |||||||||||| ||||||| ||||||||| ||||||| |||| |||  |||| | |||||||||||||||||||||||| |||||||||||||||||||    
T  11338165 gtcattcaacattaactatctcatatagttgcaccatttcaagcatttcttaccttctaagtaagatagcatacacattttatgataaacatcatatcca 11338066  T
Q  103 a--tacaatcattcattcatacaacttcacttaatcatataagaa 145  Q
    |  |||||||| ||||||||||||||||||||| |||||||||||    
T  11338065 aactacaatcaatcattcatacaacttcacttagtcatataagaa 11338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 22367793 - 22367647
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||||||||||||||||||||||||||||||||||  ||  |||| |||||| |||||||||||| |||||| || || |||||||||||||||||  ||    
T  22367793 cattcaacatcaactatcacatatagtttcaccatctaaacattccttacattctaagtaagataacatacatatctcgtgataaacatcatatccaaaa 22367694  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||||||    
T  22367693 tataatcactcattcatacaacttcacttagtcatacaagaataatc 22367647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 11341605 - 11341749
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    ||||||||||||||||||||||||||| | ||||| |||||| |||||  | || | ||||||||||||||| |||| |||||||||||||||||| |||    
T  11341605 tcattcaacatcaactatcacatatagct-caccaattcaagcattctc-atattccaagtaagatagcatatacatctcatgataaacatcatattcaa 11341702  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  11341703 tacaatcattcattcatacaacttcacttagtcatacaagaataatc 11341749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 22884602 - 22884454
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| |||||||||||||| |||||||||||| ||||| |||||| |||||  | || | |||||||||| |||| |||| ||||||||||||||||||    
T  22884602 aatgttattcaacatcaactgtcacatatagtt-caccaattcaagcattctc-atattccaagtaagataacatatacatctcatgataaacatcatat 22884505  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
     ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  22884504 tcaatacaatcattcattcatacaacttcacttagtcatacaagaataatc 22884454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 23453810 - 23454032
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    |||||||||||| |||||||| | |||||||||| |||||| |||  |||  ||||||||||||||||| | |||||| |||| ||||||||||||||||    
T  23453810 aatgtcattcaaaatcaactacctcatatagttttaccatttcaaacatttcttacatcctaagtaagagaacatacaacattccatgataaacatcata 23453909  T
Q  99 tccaatac--aatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgact--caagaaaacatttccgacc 194  Q
    ||||| |   ||||||||||||||||||||||||||| |||||||||||||||| |||  | |||||||   |||||||  |||| || ||||||||||     
T  23453910 tccaacatttaatcattcattcatacaacttcacttagtcatataagaataatctcaataaatcataagcctattgacttacaag-aaccatttccgac- 23454007  T
Q  195 aaaaaccgtatcaagtggcaaccggc 220  Q
     || ||||||||||||||||| ||||    
T  23454008 -aataccgtatcaagtggcaaacggc 23454032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 23465315 - 23465537
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    |||||||||||| |||||||| | |||||||||| |||||| |||  |||  ||||||||||||||||| | |||||| |||| ||||||||||||||||    
T  23465315 aatgtcattcaaaatcaactacctcatatagttttaccatttcaaacatttcttacatcctaagtaagagaacatacaacattccatgataaacatcata 23465414  T
Q  99 tccaatac--aatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgact--caagaaaacatttccgacc 194  Q
    ||||| |   ||||||||||||||||||||||||||| |||||||||||||||| |||  | |||||||   |||||||  |||| || ||||||||||     
T  23465415 tccaacatttaatcattcattcatacaacttcacttagtcatataagaataatctcaataaatcataagcctattgacttacaag-aaccatttccgac- 23465512  T
Q  195 aaaaaccgtatcaagtggcaaccggc 220  Q
     || ||||||||||||||||| ||||    
T  23465513 -aataccgtatcaagtggcaaacggc 23465537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 25901635 - 25901488
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcatatcc-- 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | | || | |||||||| | ||||| |||| |||||||||||||| |||||      
T  25901635 tcattcaacatcaactatcacatatagtttcaccattcaaggattc-tcatattccaagtaagagaacatacaacatctcatgataaacatcgtatccaa 25901537  T
Q  102 aatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||| ||||| ||||||||||||||||||||| ||||| ||||||||||    
T  25901536 aatataatcactcattcatacaacttcacttagtcatacaagaataatc 25901488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 7424648 - 7424740
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcata 98  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||||| || |||||||||||||||||    
T  7424648 cattaaacatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcata 7424740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 19498764 - 19498855
Alignment:
Q  9 tcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcatat 99  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||||||| ||||| |||| ||||||||||||||||||    
T  19498764 tcaacatcaactgtcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacaacatctcatgataaacatcatat 19498855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 24474445 - 24474654
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac-cattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| |||||||| |||||||||||||||||||||| |||||||| |||   |||||| |||||||||||||||| |||| | |||||||| |||||      
T  24474445 aatgttattcaacaacaactatcacatatagtttcactcattcaagcatttcctacatcataagtaagatagcatatacatctaatgataaatatcat-- 24474542  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
            |||||||||||||||||||||||||| | ||||||  ||| |||| || |||| |||   |||||  ||||| |||| |||  |||||||||    
T  24474543 --------atcattcattcatacaacttcacttagttatataaacatagtcaccacaattcttaatacaattggttcaag-aaacgtttttgaccaaaaa 24474633  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||||    
T  24474634 ccatatcaagtggccaccggc 24474654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 21234749 - 21234670
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  21234749 acatctcatgataaacatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 21234670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 215
Target Start/End: Original strand, 23505663 - 23505802
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgac 174  Q
    |||| ||||||||| ||||||||||||  || ||| | ||||||||||||||||||||| ||||| ||||||| || | || ||||||||   ||||| |    
T  23505663 acatctcatgataatcatcatatccaaaatataattactcattcatacaacttcacttagtcatacaagaatagtctccacaattcataaaacaattggc 23505762  T
Q  175 tcaagaaaacatttccgaccaaaaaccgtatcaagtggcaa 215  Q
    ||||| ||||||||||||| |||| ||  |||| |||||||    
T  23505763 tcaag-aaacatttccgacaaaaatccaaatcatgtggcaa 23505802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 20615547 - 20615626
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| |||||| |||||||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  20615547 acatctcatgagaaacatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 20615626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 110404 - 110364
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  110404 aatgtcatccaacatcaactatcacatatagtttcaccatt 110364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1169963 - 1169923
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  1169963 aatgtcattcaacatcaactatcacatgtagtttcaccatt 1169923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 11341493 - 11341597
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||| |||  | | || | |||||||| | |||||| ||| |||||| ||||||||||    
T  11341493 aatgtcattcaacatcaactatatcatatagtttcaccatttcaagcatttctcatattccaagtaagagaacatacaacatctcatgacaaacatcata 11341592  T
Q  99 tccaa 103  Q
    |||||    
T  11341593 tccaa 11341597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27185135 - 27185095
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  27185135 aatgttattcaacatcaactatcacatatagtttcaccatt 27185095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 37051919 - 37051998
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| |||||| ||| |||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  37051919 acatctcatgagaaatatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 37051998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 35792341 - 35792275
Alignment:
Q  82 tcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    |||||||||| |||||||||||  || ||||| ||||||||||||||||||||| ||||| ||||||    
T  35792341 tcatgataaatatcatatccaaaatataatcactcattcatacaacttcacttagtcatacaagaat 35792275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11205 - 11246
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  11205 aatgtcattcaacatcaactatatcatatagtttcaccattc 11246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1221153 - 1221112
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  1221153 aatgtcattcaacatcaactatatcatatagtttcaccattc 1221112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7424534 - 7424575
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  7424534 aatgtcattcaacatcaactatatcatatagtttcaccattc 7424575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9732088 - 9732047
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  9732088 aatgtcattcaacatcaactatatcatatagtttcaccattc 9732047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10779601 - 10779560
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  10779601 aatgtcattcaacatcaactatatcatatagtttcaccattc 10779560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11582733 - 11582774
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  11582733 aatgtcattcaacatcaactatatcatatagtttcaccattc 11582774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18779415 - 18779374
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  18779415 aatgtcattcaacatcaactatatcatatagtttcaccattc 18779374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22367906 - 22367865
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  22367906 aatgtcattcaacatcaactatatcatatagtttcaccattc 22367865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25425476 - 25425517
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  25425476 aatgtcattcaacatcaactatatcatatagtttcaccattc 25425517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11213024 - 11212986
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  11213024 aatgtcattcaacatcaattatcgcatatagtttcacca 11212986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23513655 - 23513693
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  23513655 aatgtcattcaacatcaactatcacatttagttttacca 23513693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29192042 - 29192004
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  29192042 aatgtcattcaacatcaactatatcatatagtttcacca 29192004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21074911 - 21074870
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    |||||| |||||||||||||||  ||||||||||||||||||    
T  21074911 aatgtcgttcaacatcaactatatcatatagtttcaccattc 21074870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4201387 - 4201347
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||| |||||||||||||  |||||||||||||||||    
T  4201387 aatgtcatgcaacatcaactatatcatatagtttcaccatt 4201347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 25192418 - 25192390
Alignment:
Q  1 aatgtcattcaacatcaactatcacatat 29  Q
    |||||||||||||||||||||||||||||    
T  25192418 aatgtcattcaacatcaactatcacatat 25192390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 16183311 - 16183094
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||    
T  16183311 aatgtcattcaacatcaactatcacatatagtttcatcattcaagcattctttacattctaagtaagatagcatacacatctcatgatatacatcatatc 16183212  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||| ||||||||||||||||||||||||||||| | ||||||  ||| |||| || |||| ||||  |||||  ||||| ||||||||||||||||||||    
T  16183211 caaaacaatcattcattcatacaacttcacttagttatataaacatagtcaccacaattcttaagacaattggttcaag-aaacatttccgaccaaaaac 16183113  T
Q  201 cgtatcaagtggcaaccgg 219  Q
    | ||||||||||| |||||    
T  16183112 catatcaagtggccaccgg 16183094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 18909656 - 18909869
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  |||||| || ||||||||||||||||||||||||    
T  18909656 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatcacatacatatctcatgataaacatcatatccaata 18909755  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| ||||| |    
T  18909756 caatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaagaccgtgt 18909854  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  18909855 caagtggcaaacggc 18909869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 53769627 - 53769840
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  |||||| || ||||||||||||||||||||||||    
T  53769627 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatcacatacatatctcatgataaacatcatatccaata 53769726  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| ||||| |    
T  53769727 caatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaagaccgtgt 53769825  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  53769826 caagtggcaaacggc 53769840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 50113434 - 50113218
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  50113434 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattctttatattctaagtaagatagcatacacatctcatgataaacatcatatc 50113335  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||| ||||||||||||||||||||||||||| | ||||||  ||  |||| || |||| ||||  |||||  ||||| ||||||||||||||||||      
T  50113334 caatataatcattcattcatacaacttcacttagttatataaacatggtcaccacaattcttaagacaattggttcaag-aaacatttccgaccaaaa-- 50113238  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    ||| ||||||||||| ||||    
T  50113237 cgtgtcaagtggcaaacggc 50113218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 6148143 - 6147927
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||||||| |||||||| ||||||||| ||||||||||    
T  6148143 aatgtcattcaacatcaactatcatatatagtttcaccattcaagtatttcttacattctaagtaagataacatacacacttcatgatagacatcatatc 6148044  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||| | |||||| |||||||||| ||||||||   |  ||||||| | |||||||  ||||| ||||||| ||||||||| |||||||||    
T  6148043 caatacaatcattaaatcataccacttcacttattcatataa---tggtcacaacaaatcataagacaattggctcaagacaacatttccaaccaaaaac 6147947  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    | ||||||||||| ||||||    
T  6147946 catatcaagtggccaccggc 6147927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 22274011 - 22274155
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  22274011 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaata 22274110  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  22274111 caatcattcattcatacaacttcacttagtcatacaagaataatc 22274155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 22145576 - 22145362
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||| |||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  22145576 aatgttattcaacatcaactatcacatatagtttcatcatccaagcattccttacatcttaagtaagatagcatacacatatcatgataaatatcatatc 22145477  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatat-aagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    ||||||||||||||||||||||||||| ||||| |||||| || |||  |||| || |||||||||  |||||||||||| |||||||||||||||| ||    
T  22145476 caatacaatcattcattcatacaacttaacttagtcatataaaaaatggtcacgacaattcataagacaattgactcaag-aaacatttccgaccaagaa 22145378  T
Q  200 ccgtatcaagtggcaa 215  Q
    |  | |||||||||||    
T  22145377 ctatgtcaagtggcaa 22145362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 2450518 - 2450374
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| ||| |||||||||||||||||| |||||    
T  2450518 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacccatctcatgataaacatcatattcaata 2450419  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  2450418 caatcattcattcatacaacttcacttagtcatacaagaataatc 2450374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 13837733 - 13837938
Alignment:
Q  13 catcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaatcat 112  Q
    ||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||| ||||||||||| |||| |||    
T  13837733 catcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaatatcatatccaaaacaaacat 13837832  T
Q  113 tcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatcaagtgg 212  Q
    ||||||||||||||||||||| ||||||||||||| |||| |  | |||||||  ||||||||||||  |||||||||||| |||| ||  |||| ||||    
T  13837833 tcattcatacaacttcacttagtcatataagaatagtcaccataaatcataagacaattgactcaag--aacatttccgacaaaaatccaaatcatgtgg 13837930  T
Q  213 caaccggc 220  Q
    ||| ||||    
T  13837931 caaacggc 13837938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 17099571 - 17099789
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||| |||  |||||| ||||| ||||| ||||||||||| |||||||| ||||||||    
T  17099571 aatgtcattcaacattaactatctcatatagtttcaccatttcaagcatttcttacattctaagcaagattgcatacacattacatgataa-catcatat 17099669  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgac-tcaagaaaacatttccgaccaaaa 198  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||| |||||||||||||| | ||  || ||||||||||  ||     
T  17099670 ccaatacaatcattcattcatacaacttcacttagtcatataagagtaatcacaacaatttataaggtaattgacttgaaagaaccatttccgac--aat 17099767  T
Q  199 accgtatcaagtggcaaccggc 220  Q
    ||||||||||||||||| ||||    
T  17099768 accgtatcaagtggcaaacggc 17099789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 318915 - 318695
Alignment:
Q  1 aatgtcattcaacatcaactat-cacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcata 98  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||| |||  ||||| | ||||||||||||||||||||| | |||||||| ||||||    
T  318915 aatgtcattcaacatcaactattcacatatagtttcaccaattcaagcatttcttacaccttaagtaagatagcatacacatctgatgataaatatcata 318816  T
Q  99 tccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| || ||| |||||  |||||  ||||| ||||||||  ||||||||    
T  318815 tccaacacaatcattcattcatacaacttcacttagtcatataagaatagtcaccacaatttataagacaattggttcaag-aaacatttttgaccaaaa 318717  T
Q  199 accgtatcaagtggcaaccggc 220  Q
    ||| ||||||||||| ||||||    
T  318716 accatatcaagtggccaccggc 318695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 17957520 - 17957375
Alignment:
Q  10 caacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaa 108  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||| ||||||||| |||||||||||||||||||||||| ||    
T  17957520 caacatcaactatcacatatagtttcacccattcaagcattccttacattctaagtaagataacatacacatctcatgataaacatcatatccaataaaa 17957421  T
Q  109 tcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  17957420 tcattcattcatacaacttcacttagtcatacaagaataatcacaa 17957375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 47786183 - 47786041
Alignment:
Q  3 tgtcattcaacatcaactatcacatatagtttcaccatt-caagtattct-ttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||| | |||||||||||||||||||    
T  47786183 tgtcattcaacatcaactatcacatatagtttcaccatttcaagcattctcttacattctaagtaagatagcatacacgtctcatgataaacatcatatc 47786084  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataag 143  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  47786083 caatacaatcattcattcatacaacttcacttagtaatataag 47786041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 12351146 - 12350934
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  12351146 aatgttattccacatcaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaagatagcatacacatctcatgataagcatcatat 12351047  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccga-ccaaaa 198  Q
       ||||||||||||| ||||||||||||||||| ||||||||||||| || | || |||||||||  ||||| |||||| |||||| ||||| ||||||    
T  12351046 tttatacaatcattcaatcatacaacttcacttagtcatataagaatagtctctacaattcataagacaattggctcaag-aaacatatccgacccaaaa 12350948  T
Q  199 accgtatcaagtgg 212  Q
    ||| |||| |||||    
T  12350947 accatatcgagtgg 12350934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 49231180 - 49231326
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatccaa 103  Q
    |||||||  |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||| | ||| |||||||||||||||||| |||    
T  49231180 tcattcataatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatataacatctcatgataaacatcatattcaa 49231279  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  49231280 tacaatcattcattcatacaacttcacttagtcatacaagaataatc 49231326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 16819882 - 16820019
Alignment:
Q  14 atcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatccaatacaatcat 112  Q
    |||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  16819882 atcaactatcacatatagtttcaccatttaagcattccttacattctaagtaagataacatacaacatctcatgataaacatcatatccaatacaatcat 16819981  T
Q  113 tcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||  |||| ||||||||||    
T  16819982 tcattcatacaacttcacttagccatacaagaataatc 16820019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 15469770 - 15469552
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  15469770 aatgtcattcaacatcaactatcacatttagtttcaccaattcaaacattccttacattcta-gtaagatagcatacacatctcatgataaacatcatat 15469672  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    ||||||||||| |||||||||||||||||||||| ||||| | ||||  ||||||  | ||| |||  |||||  ||||| ||||||||||||| ||||     
T  15469671 ccaatacaatctttcattcatacaacttcacttagtcatacaggaatggtcacaataactcacaagacaattggttcaag-aaacatttccgacaaaaat 15469573  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    ||  |||| ||||||| ||||    
T  15469572 ccaaatcatgtggcaaacggc 15469552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 23491363 - 23491530
Alignment:
Q  2 atgtcattcaa-catcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||| ||||||||||||||||||||||||| | |||||  |||| ||||||| ||||||||||||||||||| | |||||||||  |||||||    
T  23491363 atgtcattcaatcatcaactatcacatatagtttcacaaattcaaacattccttacatcttaagtaagatagcatacacttctcatgataattatcatat 23491462  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  23491463 ccaaaatacaatcattcattcatacaacttcacttagtcatataagaatgatcacaacaattcataag 23491530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 11062338 - 11062184
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||||  | |||||| |||| |||  ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  11062338 aatgtcattcaacatcaactatcacatatagccttaccatttcaagcatttcttacatcctaagtaagatagcatacacatctcatgataaacattatat 11062239  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    ||  |||||||||||||||||||||||||||||||| |||||| |||||| ||||    
T  11062238 ccataatacaatcattcattcatacaacttcacttagtcatatgagaatagtcac 11062184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 35122543 - 35122763
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||  |||| ||||| ||||||||||| |||| |||| |||||| |||||||||||||||||||||  ||||||||| ||||||||    
T  35122543 aatgtcattcaacatcatttatctcatatggtttcaccatttcaagcattccttacattctaagtaagatagcatacacaactcatgataaccatcatat 35122642  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||  ||||||| |||||||| |||||| |||||||| ||||| |||||| |||||||  | |||||||   |||| |||||| |||||||||||||| ||    
T  35122643 ccaaaatacaagcattcatttatacaatttcacttagtcatacaagaatgatcacaataactcataagacgattggctcaag-aaacatttccgacc-aa 35122740  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
    |||||||||||||||||| ||||    
T  35122741 aaccgtatcaagtggcaaacggc 35122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 7852777 - 7852993
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| |||||||||| || ||||||||||||||||||||  ||    
T  7852777 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaaaatagcatacatatctcatgataaacatcatatccaaaa 7852876  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactc-aagaaaacatttccgaccaaaaaccg 202  Q
    || || |||||||||| ||| ||||||||| ||||||||| ||| || | |    |||||||  |||||  || ||| |||||||||||| |||||||||    
T  7852877 tataaccattcattcacacatcttcacttagtcatataaggatagtcgcgatagatcataagaaaattggttcaaaggaaacatttccga-caaaaaccg 7852975  T
Q  203 tatcaagtggcaaccggc 220  Q
    ||||||||||||| ||||    
T  7852976 tatcaagtggcaaacggc 7852993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13816369 - 13816511
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||  |||||| |||||||||||||| ||||||| |||||||||| |||||||    
T  13816369 aatgtcattcaacatcaactatcacatatagtttcaccaattcaaacatttcttacattctaagtaagatagcttacacatctcatgataaatatcatat 13816468  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    |||| ||||||||||||||||||||||||||||| | ||||||    
T  13816469 ccaaaacaatcattcattcatacaacttcacttacttatataa 13816511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 53899820 - 53899605
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattc-aagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc-- 101  Q
    |||||||||||||  |||| ||||| |||||||||||| ||| |||| |||||| |||||||||||||||||||||  ||||||||||||||||||||      
T  53899820 tcattcaacatcatttatctcatatggtttcaccattccaagcattccttacattctaagtaagatagcatacacaactcatgataaacatcatatccaa 53899721  T
Q  102 aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaacc 201  Q
    |||||||  ||||||| ||||||||||||||| ||||| |||||| |||||||  | |||||||  ||||| |||||| ||||||||| || | ||||||    
T  53899720 aatacaagtattcatttatacaacttcacttagtcatacaagaatgatcacaataactcataagacaattggctcaag-aaacatttctgatccaaaacc 53899622  T
Q  202 gtatcaagtggcaaccg 218  Q
     ||||||||||||||||    
T  53899621 atatcaagtggcaaccg 53899605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 51159669 - 51159475
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--a 102  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  |    
T  51159669 tcattcaacatcaactatcatatatagtttcaccattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaa 51159570  T
Q  103 atacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    ||| ||| | || |||||||||||||||||| ||||| || |||| ||||||  | ||| |||  ||||| |||||| ||||||||||||| ||||    
T  51159569 atataattactctttcatacaacttcacttagtcatacaaaaatagtcacaataactcacaagacaattggctcaag-aaacatttccgacaaaaa 51159475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 215
Target Start/End: Original strand, 54423001 - 54423145
Alignment:
Q  70 agcatacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaa 169  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  54423001 agcatacacatcacatgataaacatcatatccaatacaatcattcattcatacaacttcacttagtcatataagagtaatcacaacaattcataaggtaa 54423100  T
Q  170 ttgac-tcaagaaaacatttccgaccaaaaaccgtatcaagtggcaa 215  Q
    ||||| | ||  || ||||||||||  || |||||||||||||||||    
T  54423101 ttgacttgaaagaaccatttccgac--aataccgtatcaagtggcaa 54423145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 11198873 - 11198653
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| |||||||||| |||||| |||  |||  |||||| |||||||||| | ||||||||| ||||||||  ||||||||    
T  11198873 aatgtcattcaacattaactatctcatatagttttaccatttcaaacatttcttacattctaagtaagagaacatacacatctcatgatattcatcatat 11198774  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||||  |||||||||||||||||||||| ||||||| ||||||||||||| |||| |  | || ||||  |||||||| |||  |||||||| ||| |||    
T  11198773 ccaacatacaatcattcattcatacaacctcacttagtcatataagaatagtcacgataaatcttaagacaattgacttaag-gaacatttctgactaaa 11198675  T
Q  198 aaccgtatcaagtggcaaccgg 219  Q
    ||||||||||||||||||||||    
T  11198674 aaccgtatcaagtggcaaccgg 11198653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 12562779 - 12562563
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||| | |||||||||| |||| |||||| |||| |||||| |||||||||| | ||||||||| ||| |||||| |||||||    
T  12562779 aatgtcattcaacatcaactacctcatatagttttaccaattcaagcattccttacattctaagtaagagaacatacacatctcaagataaatatcatat 12562680  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||||  |||||||||||||||||||||||||||||| ||||||||||||  |||| |     | ||||  ||||||||||||  |||||||||| |||||    
T  12562679 ccaacatacaatcattcattcatacaacttcacttagtcatataagaatggtcacgatagaacgtaagacaattgactcaag-gaacatttccgcccaaa 12562581  T
Q  198 aaccgtatcaagtggcaa 215  Q
    ||||||| ||||||||||    
T  12562580 aaccgtaccaagtggcaa 12562563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19572073 - 19571932
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||  |||  |||||| |||||||||||||| ||||||| |||||||||| |||||||    
T  19572073 aatgtcattcaacatcaacta-cacatatagtttcaccaattcaaacatttcttacattctaagtaagatagcttacacatctcatgataaatatcatat 19571975  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    |||| ||||||||||||||||||||||||||||| | ||||||    
T  19571974 ccaaaacaatcattcattcatacaacttcacttagttatataa 19571932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 14297355 - 14297574
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||  |||| ||||| ||||||||||| |||  |||| |||||| |||||||||||||||||||||  |||||||||  |||||||    
T  14297355 aatgtcattcaacatcatttatctcatatggtttcaccatttcaatcattccttacattctaagtaagatagcatacacaactcatgataagaatcatat 14297454  T
Q  100 cc-aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    || ||||  |||||||||||||||||||||| ||| |||||||||||||  ||| |  | |||||||  ||||| |||||| ||||||||||||||||||    
T  14297455 ccaaataatatcattcattcatacaacttca-ttagtcatataagaatagccacgataagtcataagacaattggctcaag-aaacatttccgaccaaaa 14297552  T
Q  199 accgtatcaagtggcaaccggc 220  Q
    ||| || |||||||||| ||||    
T  14297553 accataccaagtggcaaacggc 14297574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 14302982 - 14303201
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||  |||| ||||| ||||||||||| |||  |||| |||||| |||||||||||||||||||||  |||||||||  |||||||    
T  14302982 aatgtcattcaacatcatttatctcatatggtttcaccatttcaatcattccttacattctaagtaagatagcatacacaactcatgataagaatcatat 14303081  T
Q  100 cc-aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    || ||||  |||||||||||||||||||||| ||| |||||||||||||  ||| |  | |||||||  ||||| |||||| ||||||||||||||||||    
T  14303082 ccaaataatatcattcattcatacaacttca-ttagtcatataagaatagccacgataagtcataagacaattggctcaag-aaacatttccgaccaaaa 14303179  T
Q  199 accgtatcaagtggcaaccggc 220  Q
    ||| || |||||||||| ||||    
T  14303180 accataccaagtggcaaacggc 14303201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 8630706 - 8630920
Alignment:
Q  4 gtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    |||||||||| |||| |||||||||||||||||||||||||  |||| |||||| |  |  |||||||||||||||| |||||||||  |||||  |  |    
T  8630706 gtcattcaacgtcaattatcacatatagtttcaccattcaaacattccttacattccgaacaagatagcatacacatctcatgataat-atcatgcctca 8630804  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgt 203  Q
     ||||||||||||||||||||||||||||| ||||||||||||| |||| || |||||||||  |||||  ||||| |||||||| | |||||| |||||    
T  8630805 aacaatcattcattcatacaacttcacttagtcatataagaatagtcaccacaattcataagacaattggttcaag-aaacattttcaaccaaagaccgt 8630903  T
Q  204 atcaagtggcaaccggc 220  Q
     ||||||||||| ||||    
T  8630904 gtcaagtggcaaacggc 8630920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 17937353 - 17937492
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||| |||||||| | | || |||  |||||||||| ||||||||||||||||||   |||||||||||| |||    
T  17937353 aatgtcattcaacatcaactatcacatatactttcaccaatactagcatttcttacatcctatgtaagatagcatacacataatatgataaacatcgtat 17937452  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcata 139  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  17937453 ccaatacaatcattcattcatacatcttcacttagtcata 17937492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15860449 - 15860308
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||   ||||| |||| |||||||||||||||||||||| | |||||||| |||||||    
T  15860449 aatgtcatccaacatcaactatcacatatagcttcaccaattcaacatttctt-acattctaagtaagatagcatacacatcttatgataaatatcatat 15860351  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    |||| ||||||||||||||||||||||||||||| | ||||||    
T  15860350 ccaaaacaatcattcattcatacaacttcacttagttatataa 15860308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 40938588 - 40938736
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||  ||||||||| | ||||||||| ||||||||  ||  |||||    
T  40938588 aatgtcattcaacatttactatctcatatagtttcaccattcaagcattctttacattataagtaagagaacatacacatctcatgatattcactatatc 40938687  T
Q  101 ca--atacaatcattcattcatacaacttcacttaatcatataagaata 147  Q
    ||  |||||||||| |||||||||||||||||||| |||||||||||||    
T  40938688 caacatacaatcatccattcatacaacttcacttagtcatataagaata 40938736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 14294286 - 14294434
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| |||||||||| |||||| |||| |||||| |||| |||||||||| | ||||||||| ||||||||  ||||||||    
T  14294286 aatgtcattcaacattaactatctcatatagttttaccatttcaagcattctt-acattctaagtaagagaacatacacatctcatgatattcatcatat 14294384  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaata 147  Q
    ||||  ||||||||||| |||||||||||||||||| |||||||||||||    
T  14294385 ccaacatacaatcattccttcatacaacttcacttagtcatataagaata 14294434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 14299913 - 14300061
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| |||||||||| |||||| |||| |||||| |||| |||||||||| | ||||||||| ||||||||  ||||||||    
T  14299913 aatgtcattcaacattaactatctcatatagttttaccatttcaagcattctt-acattctaagtaagagaacatacacatctcatgatattcatcatat 14300011  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaata 147  Q
    ||||  ||||||||||| |||||||||||||||||| |||||||||||||    
T  14300012 ccaacatacaatcattccttcatacaacttcacttagtcatataagaata 14300061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 25057703 - 25057856
Alignment:
Q  1 aatgtcattcaa-catcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcata 98  Q
    |||||||| ||| ||||||||||||||||||||||| | | |||||  |||||||||||| ||||||||||||||||||| | |||||||||  ||||||    
T  25057703 aatgtcatccaatcatcaactatcacatatagtttcgcaaattcaaacattctttacatcttaagtaagatagcatacacttatcatgataattatcata 25057802  T
Q  99 tcc--aatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||  ||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  25057803 tccaaaatacaatcattcattcatacaacttcccttagtcatacaagaataatc 25057856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 142
Target Start/End: Original strand, 33340812 - 33340949
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    |||||||||||||| |   ||||||||||||||| |||||  |||  |||||| |||||||||||||| ||||||| |||||||||| |||||||||||     
T  33340812 cattcaacatcaaccacatcatatagtttcaccaattcaaacatttcttacattctaagtaagatagcttacacatctcatgataaatatcatatccaaa 33340911  T
Q  105 acaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  33340912 acaatcattcattcatacaacttcacttagttatataa 33340949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 17138342 - 17138553
Alignment:
Q  11 aacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatccaa--tac 106  Q
    |||| |||||| | |||||||||| |||||| |||| |||  ||||||||||||||||| | ||| || |||  | ||||||||||||| |||||  ||     
T  17138342 aacaacaactacctcatatagttttaccatttcaagcatttcttacatcctaagtaagagaacatgcaacatcacttgataaacatcatttccaacatat 17138441  T
Q  107 aatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatc 206  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| |  |||||||||  ||||| ||||| | ||||||||||||  || ||||||||    
T  17138442 aatcattcattcatataacttcacttaatcatataagaatagtcacgataattcataagtcaattggctcaaaagaacatttccgac--aataccgtatc 17138539  T
Q  207 aagtggcaaccggc 220  Q
    ||||||||| ||||    
T  17138540 aagtggcaaacggc 17138553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 17523690 - 17523552
Alignment:
Q  82 tcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaag 179  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||| ||| ||| ||||||||||||| |||| |  | |||||||  ||||||||||||    
T  17523690 tcatgataaacatcatatccaaaatacaatcattcattcatgcaacgtca-ttagtcatataagaatagtcacgataaatcataagacaattgactcaag 17523592  T
Q  180 aaaacatttccgaccaaaaaccgtatcaagtggcaaccggc 220  Q
    ||  |||||||||||||||||| ||||||||||||| ||||    
T  17523591 aag-catttccgaccaaaaaccatatcaagtggcaaacggc 17523552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15574897 - 15575002
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||| ||||||||||    
T  15574897 aatgtcattcaacatcaactaccacatttagtttcaccacttcaaacattccttacattcta-gtaagatagcatacacatctcatgatgaacatcatat 15574995  T
Q  100 ccaatac 106  Q
     ||||||    
T  15574996 tcaatac 15575002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15613916 - 15614021
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||| ||||||||||    
T  15613916 aatgtcattcaacatcaactaccacatttagtttcaccacttcaaacattccttacattcta-gtaagatagcatacacatctcatgatgaacatcatat 15614014  T
Q  100 ccaatac 106  Q
     ||||||    
T  15614015 tcaatac 15614021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 19945483 - 19945700
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcata 98  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||| | | || | |||||| |  | | || | || |||||||||||||||||    
T  19945483 aatgttattcaacatcaactatcacatatagtttcaccatttcaagcattc-tcatattccaagtaatagggaaaacgatatctcatgataaacatcata 19945581  T
Q  99 tcca--atacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactc-aagaaaacatttccgacca 195  Q
    || |  ||| || |||||||||| ||| ||||||||| ||||||||| ||| |||| |    |||||||  |||||  || ||| |||||||||||| ||    
T  19945582 tcaaacatataaccattcattcacacatcttcacttagtcatataaggatagtcacgatagatcataagaaaattggttcaaaggaaacatttccga-ca 19945680  T
Q  196 aaaaccgtatcaagtggcaa 215  Q
    ||||||||||||||||||||    
T  19945681 aaaaccgtatcaagtggcaa 19945700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 38167007 - 38167070
Alignment:
Q  102 aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||    
T  38167007 aatacaatcattcattcatacaacttcacttagtcatacaagaatggtcacaacaattcataag 38167070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 12031233 - 12031164
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataag 143  Q
    ||||||| |||||||| ||||||||||| | | ||||||||||||||||||||||||||| | |||||||    
T  12031233 tacacatctcatgatagacatcatatcccacataatcattcattcatacaacttcacttagttatataag 12031164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33340699 - 33340740
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33340699 aatgtcattcaacatcaactatcacatatagtttcaccattc 33340740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16819762 - 16819802
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16819762 aatgtcattcaacatcaactatcacatatagtttcaccatt 16819802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 39654774 - 39654925
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatcca 102  Q
    ||||||||||| ||||| | |||||||||| |||||| ||||||||  | |||| ||||||||||   |||||| ||| | |||| ||| ||||||||||    
T  39654774 tcattcaacattaactacctcatatagttttaccatttcaagtatttctcacattctaagtaagaggacatacaacatcttatgacaaatatcatatcca 39654873  T
Q  103 a--tacaatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    |  || || |||||||||| ||| ||||||||| ||||||||||||| ||||    
T  39654874 acatataaccattcattcacacatcttcacttagtcatataagaatagtcac 39654925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51159780 - 51159742
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51159780 aatgtcattcaacatcaactatcacatatagtttcacca 51159742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 2048969 - 2049038
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataag 143  Q
    ||||||| |||||||| ||||||||||| | | ||||||||||||||||||||| ||||| | |||||||    
T  2048969 tacacatctcatgatagacatcatatcccacataatcattcattcatacaactttacttagttatataag 2049038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 220
Target Start/End: Original strand, 16260149 - 16260261
Alignment:
Q  107 aatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatc 206  Q
    ||||| ||||||||||||||||||||| ||||| ||||||| |||| || |||| ||||  ||||   ||||| |||||||| |||||||| ||||| ||    
T  16260149 aatcactcattcatacaacttcacttagtcatacaagaatagtcaccacaattcgtaagacaattagttcaag-aaacattttcgaccaaagaccgtgtc 16260247  T
Q  207 aagtggcaaccggc 220  Q
    || |||||| ||||    
T  16260248 aattggcaaacggc 16260261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2048917 - 2048953
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  2048917 aatgtcattcaacatcaactatcacatatagtttcac 2048953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 19230968 - 19231036
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| | |||||| ||||||||||| | | ||||||||||||||||||||||||||| | ||||||    
T  19230968 tacacatcttatgatagacatcatatcccacataatcattcattcatacaacttcacttagttatataa 19231036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 14522538 - 14522487
Alignment:
Q  52 ttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    |||||| |||||||||||| ||||||||| |||||||||| |||||||||||    
T  14522538 ttacattctaagtaagataacatacacatctcatgataaatatcatatccaa 14522487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 10737388 - 10737476
Alignment:
Q  15 tcaactatcacatatagtttcaccatt-caagtattctt-tacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    ||||||||||||||||||||||||||| || | |||||  ||| ||| ||||||||||||||||| || ||||||||| ||||||||||||    
T  10737388 tcaactatcacatatagtttcaccatttcaggcattctcatac-tcc-aagtaagatagcatacatatctcatgataatcatcatatccaa 10737476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 19230919 - 19230953
Alignment:
Q  4 gtcattcaacatcaactatcacatatagtttcacc 38  Q
    |||||||||||||||||||||||||||||||||||    
T  19230919 gtcattcaacatcaactatcacatatagtttcacc 19230953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2450631 - 2450590
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  2450631 aatgtcattcaacatcaactatatcatatagtttcaccattc 2450590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18909543 - 18909584
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  18909543 aatgtcattcaacatcaactatatcatatagtttcaccattc 18909584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22273898 - 22273939
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  22273898 aatgtcattcaacatcaactatatcatatagtttcaccattc 22273939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 53769514 - 53769555
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  53769514 aatgtcattcaacatcaactatatcatatagtttcaccattc 53769555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12031285 - 12031249
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac 37  Q
    ||||||||||||||||||||||||||||| |||||||    
T  12031285 aatgtcattcaacatcaactatcacatatcgtttcac 12031249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7852664 - 7852705
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||| ||||    
T  7852664 aatgtcattcaacatcaactatatcatatagtttcactattc 7852705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17957637 - 17957596
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    |||| |||||||||||||||||  ||||||||||||||||||    
T  17957637 aatgacattcaacatcaactatatcatatagtttcaccattc 17957596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8269705 - 8269673
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  8269705 aatgttattcaacatcaactatcacatatagtt 8269673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8276816 - 8276784
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  8276816 aatgttattcaacatcaactatcacatatagtt 8276784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 11883554 - 11883518
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  11883554 tcattcaacatcaactatctcatatagttttaccatt 11883518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 44228283 - 44228315
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  44228283 aatgttattcaacatcaactatcacatatagtt 44228315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 21275716 - 21275503
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||| || ||||||||||||||||||||||||    
T  21275716 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacatatctcatgataaacatcatatccaata 21275617  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| ||||| |    
T  21275616 caatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaagaccgtgt 21275518  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  21275517 caagtggcaaacggc 21275503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 22273742 - 22273951
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||| || ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  22273742 aatgtcattcaacatcaactatcaaatttagtttcaccaattcaatcattccttacattcta-gtaagatagcatacacatctcatgataaacatcatat 22273840  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||| | |||||     
T  22273841 ccaatacaatcattcattcatacaacttcacttagtcatacaagaataatcacaaccattcattaggtaattgactcaataaaacatctcctatcaaaac 22273940  T
Q  200 ccgtatcaagt 210  Q
    || ||||||||    
T  22273941 ccatatcaagt 22273951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 22282975 - 22283184
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||| || ||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| ||| ||||||||||||||    
T  22282975 aatgtcattcaacatcaactatcaaatttagtttcaccaattcaaacattccttacattcta-gtaagatagcatacacatctcaagataaacatcatat 22283073  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||||     
T  22283074 ccaatacaatcattcattcatacaacttcacttagtcatacaagaataatcacaaccattcataaggtaattgactcaataaaacatctccaatcaaaac 22283173  T
Q  200 ccgtatcaagt 210  Q
    || ||||||||    
T  22283174 ccatatcaagt 22283184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 12643214 - 12643001
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  |||||| || ||||||||||||||||||||||||    
T  12643214 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatcacatacatatctcatgataaacatcatatccaata 12643115  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| ||||| |    
T  12643114 caatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaagaccgtgt 12643016  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  12643015 caagtggcaaacggc 12643001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 42179555 - 42179342
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||| |||||||||||||||||||||| |    
T  42179555 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatgcacatctcatgataaacatcatatccaaaa 42179456  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||| |||||| | ||||||  |||  ||| || |||| ||||  |||||  |||| |||||||||||||| |||||||||||    
T  42179455 caatcattcattcatacaactccacttagttatataaacatagccaccacaattcttaagacaattggttcaa-aaaacatttccgactaaaaaccgtat 42179357  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  42179356 caagtggcaaacggc 42179342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 19887969 - 19887825
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  19887969 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaata 19887870  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  19887869 caatcattcattcatacaacttcacttagtcatacaagaataatc 19887825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 36892013 - 36891794
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaaca-tcata 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| |||| |||||| ||| |||||||| ||||||||  |||||||||||| |||||    
T  36892013 aatgtcattcaacatcgactatcacatatagtttcaccatttcaagcattcattacattcta-gtaagatatcatacacacctcatgataaacaatcata 36891915  T
Q  99 tccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaa 198  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||  |||||||||  ||||| |||||| |||||||| |||||||||    
T  36891914 tccaatacaatctttcaatcatacaacttcacttagtcatataagaatgatcacaataattcataagacaattggctcaag-aaacattttcgaccaaaa 36891816  T
Q  199 accgtatcaagtggcaaccggc 220  Q
    ||| ||||||||||| ||||||    
T  36891815 accatatcaagtggccaccggc 36891794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 21140843 - 21140987
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| || |||||||||||||||||| |||||    
T  21140843 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatattcaata 21140942  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  21140943 caatcattcattcatacaacttcacttagtcatacaagaataatc 21140987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 3800195 - 3800036
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  3800195 cattaaacatcaactatcacatatagtttcactattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatattcaata 3800096  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| |  |||||||||    
T  3800095 caatcattcattcatacaacttcacttagccatataagaatagtcaccaaaattcataag 3800036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 27260418 - 27260592
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || | || ||| ||| ||| |||||||||||| | ||||||||||||||||||    
T  27260418 aatgtcattcaacatcaactatcacatatagtttcaccatttcaagcatcccttgcattcta-gtatgatagcatacacctctcatgataaacatcatat 27260516  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgact 175  Q
    |||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  27260517 ccaataaaatcgttcattcatacaacttcacttagtcatataagaatagtcacaacaattcataaggtaattgact 27260592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 6878300 - 6878513
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| |||||||||||||||||||||||||||||| || |||||| |||  ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  6878300 aatgttattcaacatcaactatcacatatagtttcaacaattcaagcatttcttacatcctaagtaagatagcatacacatctcatgataaatatcatat 6878399  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||  |||||||| |||| |||| ||||||||||||| | ||||||||||  |||| || |||||||||  ||||| |||||| ||| |||||||||||||    
T  6878400 ccaaaatacaattattcgttcacacaacttcacttagttatataagaatggtcaccacaattcataagacaattggctcaag-aaatatttccgaccaaa 6878498  T
Q  198 aaccgtatcaagtgg 212  Q
    |||| ||||||||||    
T  6878499 aaccatatcaagtgg 6878513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 16900224 - 16900361
Alignment:
Q  3 tgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc 101  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||| ||    
T  16900224 tgtcatttaacatcaactatcacatatagtttcaccatttcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcataccc 16900323  T
Q  102 aatacaatcattcattcatacaacttcacttaatcata 139  Q
    |||||||||||||||||||||||||||||||| |||||    
T  16900324 aatacaatcattcattcatacaacttcacttagtcata 16900361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 16993615 - 16993752
Alignment:
Q  3 tgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc 101  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||| ||    
T  16993615 tgtcatttaacatcaactatcacatatagtttcaccatttcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcataccc 16993714  T
Q  102 aatacaatcattcattcatacaacttcacttaatcata 139  Q
    |||||||||||||||||||||||||||||||| |||||    
T  16993715 aatacaatcattcattcatacaacttcacttagtcata 16993752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 4449533 - 4449312
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||  |||| | ||| ||||||||||| |||| |||  |||||| |||||||||||||||||||||  ||||||||||||||||||    
T  4449533 aatgtcattcaacatcatttatctcctatggtttcaccatttcaagcatttcttacattctaagtaagatagcatacacaactcatgataaacatcatat 4449434  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||  ||||||| |||||||| ||||||||||||||| ||||| |||||| |||||||  | |||||||  ||||| | |||| |||||||||||| | ||    
T  4449433 ccaaaatacaagcattcatttatacaacttcacttagtcatacaagaatgatcacaataactcataagacaattggcccaag-aaacatttccgatccaa 4449335  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
    |||| ||||||||||||| ||||    
T  4449334 aaccatatcaagtggcaaacggc 4449312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 25211866 - 25211988
Alignment:
Q  30 agtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttca 129  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  25211866 agtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatccaatacaatcattcattcacacatcttca 25211965  T
Q  130 cttaatcatataagaataatcac 152  Q
    |||| ||||||||| ||| ||||    
T  25211966 cttagtcatataaggatagtcac 25211988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 8942503 - 8942715
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc--aagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcat 97  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||  |||||  | || | |||||||| | |||||| |||||||||| ||| |||||    
T  8942503 aatgttattcaacatcaactatcacatatagtttcaccattccaaacaattctc-atattccaagtaagagaacatacaacatttcatgacaaatatcat 8942601  T
Q  98 atccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| |||||||||||||||||    
T  8942602 atccaatacaatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaa 8942700  T
Q  198 aaccgtatcaagtgg 212  Q
     | ||| ||||||||    
T  8942701 gaacgtgtcaagtgg 8942715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 12637467 - 12637255
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc--aagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcat 97  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||  |||||  | || | |||||||| | |||||| |||||||||| ||| |||||    
T  12637467 aatgtcattcaacatcaactatatcatatagtttcaccattccaaacaattctc-atattccaagtaagagaacatacaacatttcatgacaaatatcat 12637369  T
Q  98 atccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||| || |||||||||  ||||   ||||| |||||||||||||||||    
T  12637368 atccaatacaatcattcattcatacaacttcacttaaccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaa 12637270  T
Q  198 aaccgtatcaagtgg 212  Q
     | ||| ||||||||    
T  12637269 gaacgtgtcaagtgg 12637255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 270035 - 270226
Alignment:
Q  25 catatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aatacaatcattcattcata 121  Q
    ||||| ||||||||||| |||| |||| |||||  |||||||||||||||||||||  ||||||||||||||||||||  ||||||| |||||||| |||    
T  270035 catatggtttcaccatttcaagcattccttacactctaagtaagatagcatacacaactcatgataaacatcatatccaaaatacaagcattcatttata 270134  T
Q  122 caacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatcaagtggcaa 215  Q
    |||||||||||| ||||| |||||| |||||||  | |||||||  || || |||||| |||||||||||||| |||||| |||||||||||||    
T  270135 caacttcacttagtcatacaagaatgatcacaataactcataagacaactggctcaag-aaacatttccgacc-aaaaccatatcaagtggcaa 270226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 22581235 - 22581094
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||| | |||||||||| |||| |||||| |||  |||||| |||||||||| | ||||||||| ||||||||||||||||||    
T  22581235 aatgtcattcaacatcaactacctcatatagttttaccaattcaagcatttcttacattctaagtaagagaacatacacatctcatgataaacatcatat 22581136  T
Q  100 cca--atacaatcattcattcatacaacttcacttaatcata 139  Q
    |||  ||||||||||||||||||||||||||||||| |||||    
T  22581135 ccaacatacaatcattcattcatacaacttcacttagtcata 22581094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 34823165 - 34823309
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    ||||||||||||||||||||||||||| | ||||| |||||| |||||  | || | ||||||||||||||| |||| |||||||||||||||||| |||    
T  34823165 tcattcaacatcaactatcacatatagct-caccaattcaagcattctc-atattccaagtaagatagcatatacatctcatgataaacatcatattcaa 34823262  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  34823263 tacaatcattcattcatacaacttcacttagtcatacaagaataatc 34823309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 12727126 - 12727270
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    ||||||||||||||||||||||||||| | ||||| |||||| |||||  | || | ||||||||||||||| |||| |||||||||||||||||| |||    
T  12727126 tcattcaacatcaactatcacatatagct-caccaattcaagcattctc-atattccaagtaagatagcatatacatctcatgataaacatcatattcaa 12727223  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  12727224 tacaatcattcattcatacaatttcacttagtcatacaagaataatc 12727270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28972897 - 28973118
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcatat 99  Q
    ||||||||||||||||||  | | || ||||||| |||||| ||| |||| |||||||||| |||||||  ||||| ||||| |||||||||||||||||    
T  28972897 aatgtcattcaacatcaaacacctcacatagttttaccatttaagcattccttacatcctaggtaagatcacatacaacattccatgataaacatcatat 28972996  T
Q  100 ccaatacaat----cattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgacca 195  Q
    |||  ||| |    ||||| |||||||||||||||||| |||||||| ||| ||||| |  |  |  |||  ||||| |||||| |||||||||||||||    
T  28972997 cca--acatttggccattcgttcatacaacttcacttagtcatataaaaatgatcacgataaaacccaagacaattggctcaag-aaacatttccgacca 28973093  T
Q  196 aaaaccgtatcaagtggcaaccggc 220  Q
    |||||||||||||||||||| ||||    
T  28973094 aaaaccgtatcaagtggcaaacggc 28973118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8886997 - 8887099
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||  ||||||  |||||||||||||||||| || ||||||||||||||||||    
T  8886997 aatgtcattcaacatcaactatcacatatagtttcaccaattcaa-tatttcttacattttaagtaagatagcatacatatctcatgataaacatcatat 8887095  T
Q  100 ccaa 103  Q
    ||||    
T  8887096 ccaa 8887099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 24572693 - 24572526
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||| ||||| |||| | |||||||||| |||||| |||  |||| | |||| |||||||||| | ||||||||| |||||| || ||||||||    
T  24572693 aatgtcattcgacatctactacctcatatagttttaccatttcaaacattcctcacattctaagtaagagaacatacacatctcatgacaagcatcatat 24572594  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||  || ||| ||||||||||||||||||||||| ||||||||||||| || ||| || |||||||    
T  24572593 ccaacatataattattcattcatacaacttcacttagtcatataagaatattctcaatcaatcataag 24572526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 9654138 - 9653983
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac-cattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||| |||   |||||| |||||||||||||||| |||| |||||||||| |||||      
T  9654138 aatgttattcaacatcaactatcacatatagtttcactcattcaagcatttcctacatcataagtaagatagcatatacatctcatgataaatatcat-- 9654041  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
            ||||||||||||||||||||||| || | ||| ||||||  ||||||| |||||||||    
T  9654040 --------atcattcattcatacaacttcacatagttatacaagaatggtcacaacaattcataag 9653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 20628647 - 20628580
Alignment:
Q  75 acacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    |||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| | ||||||    
T  20628647 acacatctcatgataaacatcatatccaatataattattcattcatacaacttcacttagttatataa 20628580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7320346 - 7320450
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcata 98  Q
    ||||||||||||||||||||| | |||||||||| |||| |||||| |||  |||||| |||||||||| | ||||| ||||  ||||||||||||||||    
T  7320346 aatgtcattcaacatcaactacctcatatagttttaccatttcaagcatttcttacattctaagtaagagaacatacaacatcccatgataaacatcata 7320445  T
Q  99 tccaa 103  Q
    |||||    
T  7320446 tccaa 7320450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 14907662 - 14907583
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  14907662 acatctcatgataaacatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 14907583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 23819112 - 23819191
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||||||||| ||||| ||||||||||||||    
T  23819112 acatctcatgataaacatcatatccaaaatataatcactccttcatacaacttcacttagtcatacaagaataatcacaa 23819191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 22862348 - 22862446
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    |||||||| ||||||||||||| |||||||||||| |||||   ||||| |||| |||||||||||| |||||| || |||||||||| |||||||||||    
T  22862348 tcattcaatatcaactatcacaaatagtttcaccaattcaacatttctt-acattctaagtaagataacatacatatatcatgataaatatcatatccaa 22862446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25877252 - 25877210
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattca 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25877252 aatgtcattcaacatcaactatcacatatagtttcaccattca 25877210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 20013977 - 20014131
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||| |||||||||||||  ||||||||||||||||| |||| |||||  | || | |||||| |  | | | |||| ||||||||||||||||||    
T  20013977 aatgtcatgcaacatcaactatatcatatagtttcaccatttcaagcattctc-atattccaagtaatagggaaaa-acatctcatgataaacatcatat 20014074  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    ||||  || ||||| || ||||||||| |||||||| ||||| ||||||||||||||    
T  20014075 ccaaaatataatcactccttcatacaaattcacttagtcatacaagaataatcacaa 20014131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25600818 - 25600858
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25600818 aatgtcattcaacatcaactatcacatatagtttcaccatt 25600858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 461646 - 461714
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||| ||||||||||| | | ||||||||||||||||||||||| ||| | ||||||    
T  461646 tacacatctcatgatagacatcatatcccacataatcattcattcatacaacttcatttagttatataa 461714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24827871 - 24827831
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  24827871 aatgttattcaacatcaactatcacatatagtttcaccatt 24827831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12726908 - 12727010
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||| |||  | | || | |||||||| | |||||| ||| |||||| ||||||||||    
T  12726908 aatgtcattcaacatcaactatatcatatagtttcaccatttcaagcatttctcatattccaagtaagagaacatacaacatctcatgacaaacatcata 12727007  T
Q  99 tcc 101  Q
    |||    
T  12727008 tcc 12727010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19888082 - 19887978
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc--aagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcat 97  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||  |||| | |||||| |||||||| | ||||| |||| |||||| ||| |||||    
T  19888082 aatgtcattcaacatcaactatatcatatagtttcaccattccaaacaattc-tcacatcccaagtaagagaacatacaacatctcatgacaaatatcat 19887984  T
Q  98 atccaa 103  Q
    ||||||    
T  19887983 atccaa 19887978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20628700 - 20628662
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  20628700 aatgacattcaacatcaactatcacatatagtttcacca 20628662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 3800302 - 3800257
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattct 51  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  3800302 cattaaacatcaactatcacatatagtttcactattcaagcattct 3800257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12643327 - 12643286
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  12643327 aatgtcattcaacatcaactatatcatatagtttcaccattc 12643286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21140730 - 21140771
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  21140730 aatgtcattcaacatcaactatatcatatagtttcaccattc 21140771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21275829 - 21275788
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  21275829 aatgtcattcaacatcaactatatcatatagtttcaccattc 21275788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 22691252 - 22691175
Alignment:
Q  4 gtcattcaacatcaactatcacatatagtttcaccat-tcaagtattctttacatcctaagtaagatagcatacacat 80  Q
    |||||||||||| ||||||| ||| ||||||||| || ||||| |||  |||||| |||||||||||| |||||||||    
T  22691252 gtcattcaacattaactatctcatgtagtttcactatctcaagcatttcttacattctaagtaagataacatacacat 22691175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 22695899 - 22695822
Alignment:
Q  4 gtcattcaacatcaactatcacatatagtttcaccat-tcaagtattctttacatcctaagtaagatagcatacacat 80  Q
    |||||||||||| ||||||| ||| ||||||||| || ||||| |||  |||||| |||||||||||| |||||||||    
T  22695899 gtcattcaacattaactatctcatgtagtttcactatctcaagcatttcttacattctaagtaagataacatacacat 22695822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 43644276 - 43644243
Alignment:
Q  3 tgtcattcaacatcaactatcacatatagtttca 36  Q
    ||||||||||||||||||||||||||||||||||    
T  43644276 tgtcattcaacatcaactatcacatatagtttca 43644243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 22787325 - 22787108
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcatatcca 102  Q
    ||||||||||||||||| | ||||| |||| || ||| ||||||||  | |||| |||| ||||| | |||||| ||| | |||||||| ||||||| ||    
T  22787325 tcattcaacatcaactacctcatatggttttacaatttcaagtatttctcacattctaattaagagaacatacaacatcttatgataaatatcatattca 22787226  T
Q  103 a--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    |  || ||  ||||||||| ||| ||||| ||| ||||||||||||| |||| |    |||||||  ||||||||||||  ||||||||||| |||  ||    
T  22787225 acatataacaattcattcacacatcttcatttagtcatataagaatagtcacgatagatcataagacaattgactcaag-gaacatttccga-caattac 22787128  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    |||||||| |||||| ||||    
T  22787127 cgtatcaactggcaaacggc 22787108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34823053 - 34823093
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  34823053 aatgtcattcaacatcaactatatcatatagtttcaccatt 34823093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 43644226 - 43644158
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||| ||||||||||| | | || ||||||||||||||||| |||||| | ||||||    
T  43644226 tacacatctcatgatagacatcatatcccacataaccattcattcatacaactacacttagttatataa 43644158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 721343 - 721407
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaaga 68  Q
    ||||||||||||||||| | |||||||||| |||| ||||||||||  | |||| ||||||||||    
T  721343 tcattcaacatcaactacctcatatagttttaccatttcaagtatttctcacattctaagtaaga 721407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5889599 - 5889559
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||||||||||||||||||||  | |||||||||||||||    
T  5889599 aatgtcattcaacatcaactataccgtatagtttcaccatt 5889559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 7652 - 7827
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||| |||| |||||| |||||||||||||||||||||| |||||||| |||||||||    
T  7652 aatgtcattcaacataaactatctcatatagtttcaccatttcaagcattcattacattctaagtaagatagcatacacatctcatgatacacatcatat 7751  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgact 175  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  7752 ccaatacaatcattcattcatacaacttcacttattcatataagaatagtcacaacaattcataaggtaattgact 7827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 15055 - 14842
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  |||||| || ||||||||||||||||||||||||    
T  15055 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatcacatacatatctcatgataaacatcatatccaata 14956  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||  ||||   ||||| ||||||||||||||||| ||||| |    
T  14955 caatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataagacaattagttcaag-aaacatttccgaccaaagaccgtgt 14857  T
Q  206 caagtggcaaccggc 220  Q
    |||||||||| ||||    
T  14856 caagtggcaaacggc 14842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15168 - 15127
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  15168 aatgtcattcaacatcaactatatcatatagtttcaccattc 15127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 32495 - 32287
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| |||| |||||||||||||    
T  32495 aatgtcattcaacatcaactatcacatatagtttcaccaattcaac-attccttacattcta-gtaagatagcatacacatctcatcataaacatcatat 32398  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||||  ||||     
T  32397 ccaatacaatcatttattcatacaacttcacttagtcatacaagaataatcacaacaattcctaaggtaattgactcaagaaaacatctccgattaaaac 32298  T
Q  200 ccgtatcaagt 210  Q
    || ||||||||    
T  32297 ccatatcaagt 32287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 127; Significance: 1e-65; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 40349 - 40557
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| |||| |||||||||||||    
T  40349 aatgtcattcaacatcaactatcacatatagtttcaccaattcaac-attccttacattcta-gtaagatagcatacacatctcatcataaacatcatat 40446  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||||  ||||     
T  40447 ccaatacaatcatttattcatacaacttcacttagtcatacaagaataatcacaacaattcctaaggtaattgactcaagaaaacatctccgattaaaac 40546  T
Q  200 ccgtatcaagt 210  Q
    || ||||||||    
T  40547 ccatatcaagt 40557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 38522 - 38372
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  38522 cattcaacatcaactaacacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 38423  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    || ||||| ||||||||||||||||| ||| ||||| ||||||||||||||    
T  38422 tataatcactcattcatacaacttcaattagtcatacaagaataatcacaa 38372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38635 - 38594
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  38635 aatgtcattcaacatcaactatatcatatagtttcaccattc 38594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 138115 - 137897
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||  || |||||||||||||||| | ||||||||||||||||||    
T  138115 aatgtcattcaacatcaactatcacatatagtttcaccaattcaagcattcattacatttta-gtaagatagcatacacttctcatgataaacatcatat 138017  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||| ||||||||||||||||| |||||||||| || |||| ||||||||||||  ||||| |||||| |||||||||||||||||||    
T  138016 ccaatacaatcattcaatcatacaacttcacttagtcatataagattactcaccaccattcataagacaattggctcaag-aaacatttccgaccaaaaa 137918  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || |||| ||| || ||||||    
T  137917 ccatatcgagttgccaccggc 137897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 87297 - 87504
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaaca-tcatat 99  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||||| |||||||||||| ||||||||  |||||||||||| ||||||    
T  87297 aatgtcattcaacattaactatctcatatagtttcaccattcaagcattccttacattctaagtaagatatcatacacacctcatgataaacaatcatat 87396  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||  |||||||            ||||| ||||||||| ||||| ||||||||||    
T  87397 ccaatacaatcattcaatcatacaacttcacttagtcatataagaatggtcacaac------------aattggctcaagaaa-cattttcgaccaaaaa 87483  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||||    
T  87484 ccatatcaagtggccaccggc 87504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 10524 - 10740
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcata-cacatttcatgataaacatcatat 99  Q
    |||||||||||| |||||||| | || ||||||| |||||||||  |||| |||||| ||||||||||   |||| ||||||  ||||||||| ||||||    
T  10524 aatgtcattcaatatcaactacctcacatagttttaccattcaatcattccttacattctaagtaagagcacataccacattctatgataaacgtcatat 10623  T
Q  100 cca--atacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    |||  |||||| ||||| || ||||||||||||||| |||||||| ||||||||| |  |  | ||||  ||||| |||||| |||||||||||||||||    
T  10624 ccaacatacaaccattcgtttatacaacttcacttagtcatataaaaataatcacgataaaacctaagacaattggctcaag-aaacatttccgaccaaa 10722  T
Q  198 aaccgtatcaagtggcaa 215  Q
    ||||||||||||||||||    
T  10723 aaccgtatcaagtggcaa 10740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 2143 - 1925
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||    
T  2143 aatgtcattcaacatcaactatcacatatagttttatcattcaagcattctttacattctaagtaagatagcatacacatctcatgatacacatcatatc 2044  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||| ||||||||||||||||||||||||||||| | ||||||  ||| |||| || |||| ||||  |||||  ||||| |||||||||||||| |||||    
T  2043 caaaacaatcattcattcatacaacttcacttagttatataaacatagtcaccacaattcttaagacaattggttcaag-aaacatttccgaccgaaaac 1945  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    ||| ||||||||||| ||||    
T  1944 cgtgtcaagtggcaaacggc 1925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 13044 - 12826
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  13044 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattataagtaagatagcatacacatctcatgataaacatcatatc 12945  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||| ||| ||||||||||||||||||||||| | |||||| |||  |||| || |||| ||||  |||||  | ||| ||||||||||||||||||||    
T  12944 caataaaattattcattcatacaacttcacttagttatataaaaatggtcaccacaattcttaagacaattggtttaag-aaacatttccgaccaaaaac 12846  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    ||| ||||||||||| ||||    
T  12845 cgtgtcaagtggcaaacggc 12826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 183 - 400
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||||||||||||||||||||||  |  |||| |||||| ||| ||||| |||||||||| | ||||||||| |||||||||    
T  183 aatgtcattcaacatcaactatcacatatagtttcaccatttcaacattcattacattcta-gtaaggtagcatacacctctcatgataagcatcatatc 281  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    | ||||||||||||| |||||||| |||||||| ||| ||||||||  ||||||| |||||||||  ||||| || || |||||||||||| ||||||||    
T  282 ctatacaatcattcaatcatacaaattcacttagtcacataagaatggtcacaacaattcataagacaattggcttaa-aaaacatttccgtccaaaaac 380  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    | ||||||||||| ||||||    
T  381 catatcaagtggccaccggc 400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 122; Significance: 1e-62; HSPs: 3)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 1369 - 1518
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||||     
T  1369 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatt 1468  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  1469 caatacaatcattcattcatacaacttcacttagtcatacaagaataatc 1518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 6089 - 6303
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||| |||||||| |||||||||| |||||||    
T  6089 aatgttattcaacatcaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaagataggatacacatctcatgataaatatcatat 6188  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||||  |||||||||| ||||||||||||||||||| ||||| ||||||  ||||||| |||||||||  ||||| |||||| |||||||||||||||||    
T  6189 ccaaaatacaatcatttattcatacaacttcacttagtcatacaagaatggtcacaacaattcataagacaattggctcaag-aaacatttccgaccaaa 6287  T
Q  198 aaccgtatcaagtggc 213  Q
    |||| |||||||||||    
T  6288 aaccatatcaagtggc 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1222 - 1262
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1222 aatgtcattcaacatcaactatcacatatagtttcaccatt 1262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 3481 - 3695
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||| |||||||| |||||||||| |||||||    
T  3481 aatgttattcaacatcaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaagataggatacacatctcatgataaatatcatat 3580  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||||  |||||||||| ||||||||||||||||||| ||||| ||||||  ||||||| |||||||||  ||||| |||||| |||||||||||||||||    
T  3581 ccaaaatacaatcatttattcatacaacttcacttagtcatacaagaatggtcacaacaattcataagacaattggctcaag-aaacatttccgaccaaa 3679  T
Q  198 aaccgtatcaagtggc 213  Q
    |||| |||||||||||    
T  3680 aaccatatcaagtggc 3695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 8256 - 8309
Alignment:
Q  159 tcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatcaagtggc 213  Q
    |||||||  ||||| ||||||||| |||||||||||||||||| |||||||||||    
T  8256 tcataagacaattggctcaagaaa-catttccgaccaaaaaccatatcaagtggc 8309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 3096 - 2925
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||| |||||||||||||||||| ||| |||||||| |||||||||    
T  3096 aatgtcattcaacattaactatctcatatagtttcaccatttcaagtattccttacattctaagtaagatagcatacgcatctcatgatacacatcatat 2997  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaatt 171  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  2996 ccaatacaaacattcattcatacaacttcacttagtcatataagaatagtcacaacaattcataaggtaatt 2925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 6405 - 6594
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  6405 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattatttacattctaagtaagatagcatacacatctcatgataaacatcatatc 6504  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccg 191  Q
    ||||||||||||||||||||||||||||||||| | |||||| |||  |||| || |||| ||||  |||||  ||||| |||||||||||    
T  6505 caatacaatcattcattcatacaacttcacttagttatataaaaatggtcaccacaattcttaagacaattggttcaag-aaacatttccg 6594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 117; Significance: 9e-60; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 39178 - 39392
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc-aa 103  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||| || ||    
T  39178 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcataaccaaa 39277  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgt 203  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| || | || ||||||||   |||||  ||||| |||||||||||||| |||||| |    
T  39278 tacaatcattcattcatacaacttcacttagtcatacaagaatagtctccacaattcataaaacaattggttcaag-aaacatttccgacc-aaaaccat 39375  T
Q  204 atcaagtggcaaccggc 220  Q
     ||||||||||| ||||    
T  39376 gtcaagtggcaaacggc 39392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 44661 - 44875
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc-aa 103  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||| ||    
T  44661 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatccaaa 44760  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgt 203  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||| || | || ||||||||   |||||  ||||| |||||||||||||| |||||| |    
T  44761 tacaatcattcattcatacaacttcacttagtcatacaagcatagtctccacaattcataaaacaattggttcaag-aaacatttccgacc-aaaaccat 44858  T
Q  204 atcaagtggcaaccggc 220  Q
     ||||||||||| ||||    
T  44859 gtcaagtggcaaacggc 44875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 39070 - 39184
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  39070 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatc 39169  T
Q  101 caatacaatcattca 115  Q
    |||||||||||||||    
T  39170 caatacaatcattca 39184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 78414 - 78558
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcatatcc- 101  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| | | || | |||||| |  | | || |||| ||||||||| ||||||||||     
T  78414 tcattcaacatcaactatcacatatagtttcaccatttcaagcattc-tcatattccaagtaatagggaaaacaacatctcatgataatcatcatatcca 78512  T
Q  102 -aatacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
     |||| ||||| ||||||||||||||||||||| ||||| ||||||    
T  78513 aaatataatcactcattcatacaacttcacttattcatacaagaat 78558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 115; Significance: 1e-58; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 46984 - 47201
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||  ||||||||||||||||||| ||| ||||| |||||||||| |||||||    
T  46984 aatgtcattcaacatcaactatcgcatatagtttcaccaattcaagcatttcttacatcctaagtaagataacatgcacatctcatgataaatatcatat 47083  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||| |||| || ||| |||||  ||||| |||||  |||||||| || |||||||    
T  47084 ccaacacaatcattcattcatacaacttcacttagtcatataagaatagtcaccacaatttataagacaattggctcaa-taaacattttcgcccaaaaa 47182  T
Q  200 ccgtatcaagtggcaaccg 218  Q
    || ||||||||||| ||||    
T  47183 ccatatcaagtggccaccg 47201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 60432 - 60649
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||  ||||||||||||||||||| ||| ||||| |||||||||| |||||||    
T  60432 aatgtcattcaacatcaactatcgcatatagtttcaccaattcaagcatttcttacatcctaagtaagataacatgcacatctcatgataaatatcatat 60531  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||| |||| || ||| |||||  ||||| |||||  |||||||| || |||||||    
T  60532 ccaacacaatcattcattcatacaacttcacttagtcatataagaatagtcaccacaatttataagacaattggctcaa-taaacattttcgcccaaaaa 60630  T
Q  200 ccgtatcaagtggcaaccg 218  Q
    || ||||||||||| ||||    
T  60631 ccatatcaagtggccaccg 60649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20599 - 20446
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    |||||||||||||||||||||||||||||||||||||||||  | | ||  |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  20599 aatgtcattcaacatcaactatcacatatagtttcaccattttattttttcttacattctaagtaagatagcatacacatctcatgataaacatcatatc 20500  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  20499 caatacaatcattcattcatacaacttcacttattcatacaagaataatcacaa 20446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 113; Significance: 2e-57; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 129353 - 129568
Alignment:
Q  5 tcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  129353 tcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcagacacatctcatgataaacatcatatccaat 129452  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactc-aagaaaacatttccgaccaaaaaccgt 203  Q
    ||||||||||||||| ||| ||||||||| ||||||||| ||| |||| |    | |||||  |||||  || ||| |||||||||||| ||||||||||    
T  129453 acaatcattcattcacacatcttcacttagtcatataaggatagtcacgatagattataagaaaattggttcaaaggaaacatttccga-caaaaaccgt 129551  T
Q  204 atcaagtggcaaccggc 220  Q
    |||||||||||| ||||    
T  129552 atcaagtggcaaacggc 129568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 90075 - 89938
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaat 104  Q
    |||||||||||||| |   ||||||||||||||| |||||  |||  |||||| |||||||||||||| ||||||| |||||||||| |||||||||||     
T  90075 cattcaacatcaaccacatcatatagtttcaccaattcaaacatttcttacattctaagtaagatagcttacacatctcatgataaatatcatatccaaa 89976  T
Q  105 acaatcattcattcatacaacttcacttaatcatataa 142  Q
    |||||||||| |||||||||||||||||| | ||||||    
T  89975 acaatcattcgttcatacaacttcacttagttatataa 89938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 129241 - 129281
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  129241 aatgtcattcaacatcaactatcacatatagtttcaccatt 129281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 90188 - 90147
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  90188 aatgtcattcaacatcaactatatcatatagtttcaccattc 90147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 113; Significance: 2e-57; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 6148 - 6292
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| ||||||||| |||||||||||||||||| |||||    
T  6148 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagataacatacacatctcatgataaacatcatattcaata 6247  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  6248 caatcattcattcatacaacttcacttagtcatacaagaataatc 6292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 217000 - 216932
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||| |||||||||||   | ||||||||||||||||||||||||||| | ||||||    
T  217000 tacacatctcatgatagacatcatatccctcataatcattcattcatacaacttcacttagttatataa 216932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6035 - 6076
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  6035 aatgtcattcaacatcaactatatcatatagtttcaccattc 6076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 217052 - 217016
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac 37  Q
    |||||||||||| ||||||||||||||||||||||||    
T  217052 aatgtcattcaaaatcaactatcacatatagtttcac 217016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13497 - 13283
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| |||| |||||||||||||||| ||||||||||| |||||| |||  ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  13497 aatgttattccacatcaactatcacatttagtttcaccaattcaagcatttcttacatcctaagtaagatagcatacacatctcatgataagcatcatat 13398  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    || ||||||||||||| ||||||||||||||||| ||||||||||||| || | || ||||||||   ||||| |||||| ||||||||||||||||| |    
T  13397 cccatacaatcattcaatcatacaacttcacttagtcatataagaatagtctccacaattcataaaacaattggctcaag-aaacatttccgaccaaaca 13299  T
Q  200 ccgtatcaagtggcaa 215  Q
    || | |||||||||||    
T  13298 ccatgtcaagtggcaa 13283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 112; Significance: 9e-57; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 95327 - 95545
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||||||| || |||||||||  ||||||||    
T  95327 aatgtcattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaggatagcatacatatctcatgataattatcatatc 95426  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||  | ||| |||  ||||| |||||| ||||||||||||| |||| |    
T  95427 caatacaatcattcattcatacaacttcacttagtcatacaagaatggtcacaataactcacaagacaattggctcaag-aaacatttccgacaaaaatc 95525  T
Q  201 cgtatcaagtggcaaccggc 220  Q
    |  |||| ||||||| ||||    
T  95526 caaatcatgtggcaaacggc 95545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 95179 - 95219
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  95179 aatgtcatttaacatcaactttcacatatagtttcaccatt 95219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 112; Significance: 9e-57; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 237040 - 237261
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||||||||||||||||||||||| |||||||    
T  237040 aatgttattcaacatcaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaagatagcatacacatttcatgataaatatcatat 237139  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    ||  |||||||||||||||||||||||||||||||| | || ||| |||  |||| || |||| ||||  |||||  ||||| |||||||| ||||||||    
T  237140 ccaaaatacaatcattcattcatacaacttcacttagttatgtaaaaatggtcaccacgattcttaagacaattggttcaag-aaacatttacgaccaaa 237238  T
Q  198 aaccgtatcaagtggcaaccggc 220  Q
    |||||| ||||||||||| ||||    
T  237239 aaccgtgtcaagtggcaaacggc 237261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 270980 - 271020
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  270980 aatgttattcaacatcaactatcacatatagtttcaccatt 271020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 155546 - 155402
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||| |  ||||||||||||||||||||||||    
T  155546 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatatcatacataactcatgataaacatcatatccaata 155447  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  155446 caatcattcattcatacaacttcacttagtcatacaagaataatc 155402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 155659 - 155618
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  155659 aatgtcattcaacatcaactatatcatatagtttcaccattc 155618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 1666 - 1507
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||||||  |||||||| ||||||||| || ||||||||||||||||||||||||    
T  1666 cattcaacatcaactatcacatatagtttcaccattcaaccattccttacattataagtaagttagcatacatatctcatgataaacatcatatccaata 1567  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| || |||||||||    
T  1566 caatcattcattcatacaacttcacttagccatataagaatagtcaccacaattcataag 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 106; Significance: 3e-53; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 145538 - 145757
Alignment:
Q  4 gtcattcaacatcaactatcaca-tatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc 101  Q
    |||||| |||||||||||||||| ||||||||||||| |||||  |||  ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  145538 gtcatttaacatcaactatcacaatatagtttcaccaattcaaacatttcttacatcctaagtaagatagcatacacatctcatgataaatatcatatcc 145637  T
Q  102 --aatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
      |||| ||||||||||||||||||||||||||| ||||| || |||  ||||||| |||||||||  ||||| |||||| |||||||||||| ||||||    
T  145638 aaaataaaatcattcattcatacaacttcacttagtcatacaataatggtcacaacaattcataagacaattggctcaag-aaacatttccgatcaaaaa 145736  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||||    
T  145737 ccatatcaagtggccaccggc 145757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 145388 - 145438
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattct 51  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  145388 aatgttatccaacatcaactatcacatatagtttcaccattcaagcattct 145438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 147698 - 147769
Alignment:
Q  72 catacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataag 143  Q
    ||||||||| |||||||| ||||||||||    | ||||||||||||||||||||||||||| | |||||||    
T  147698 catacacatctcatgatagacatcatatctctcataatcattcattcatacaacttcacttagttatataag 147769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 13057 - 13275
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||| |||||||||||||||||||| |||||| |||   ||||||||| |||||||||||||||||| |||||||||| |||||||    
T  13057 aatgtcattcaacatcaattatcacatatagtttcaccaattcaagcatttcctacatcctaggtaagatagcatacacatctcatgataaatatcatat 13156  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||| |||||||||||||||||||| ||||||||  |||||||||||| |||| || ||| |||||  ||||| ||| || |||||||| |||| |||||    
T  13157 ccaacacaatcattcattcatacaaattcacttagccatataagaatagtcaccacaatt-ataagacaattggctcgag-aaacattttcgactaaaaa 13254  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||| ||||||    
T  13255 ccatatcaagtggccaccggc 13275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 3518 - 3692
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| |||| ||||||  || |||||||| ||||||||| ||||||||||||||||||    
T  3518 aatgtcattcagcatcaactatcacatatagtttcaccatttcaagcattccttacattata-gtaagatatcatacacatctcatgataaacatcatat 3616  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgact 175  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||| || ||||||| ||||| |||||||||||||    
T  3617 ccaatacaataattcattcatacaacttcacttagtcataaaagagtagtcacaacaattcaaaaggtaattgact 3692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 28890 - 29104
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| | |||||| |||||||||| || ||||||||| ||||||||    
T  28890 aatgtcattcaacatcaactatcacagatagtttcaccatttcaagcattccttacattccaagtaaaatagcatacatatctcatgataatcatcatat 28989  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||  | ||| |||  ||||| |||||| ||||||||||||| ||||     
T  28990 ccaatacaatcattcattcatacaacttcacttagtcatacaagaatgatcacaataactcacaagacaattggctcaag-aaacatttccgacaaaaat 29088  T
Q  200 ccgtatcaagtggcaa 215  Q
    ||  |||| |||||||    
T  29089 ccaaatcatgtggcaa 29104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28742 - 28780
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28742 aatgtcattcaacatcaactatcacatatagtttcacca 28780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 43261 - 43051
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||||     
T  43261 aatgtcattaaacatcaactatcacatatgatttcaccattcaagcattccttacattctaagtaagatagcatacacatctcatgataaacatcatatt 43162  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
     |||||||||||||||||||||||||||||||| | ||||||  |||  ||| || |||| ||||  |||||  ||||| |||||||| ||||||||||     
T  43161 taatacaatcattcattcatacaacttcacttagttatataaacatagccaccacaattcttaagacaattggttcaag-aaacattttcgaccaaaaat 43063  T
Q  201 cgtatcaagtgg 212  Q
    | ||||||||||    
T  43062 catatcaagtgg 43051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 165
Target Start/End: Complemental strand, 2319 - 2162
Alignment:
Q  10 caacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aataca 107  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||  |||| |    
T  2319 caacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacatatttcatgataaacatcatatccaaaatata 2220  T
Q  108 atcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    |||| ||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||    
T  2219 atcactcattcatacaacttcacttagtcatacaagaatggtcacaacaattcataag 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2435 - 2395
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2435 aatgtcattcaacatcaactatcacatatagtttcaccatt 2395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 113861 - 113652
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||| |||||||||| || |||| |||| |||||| ||| |||||||||||||||||| |||||||||| |||||||    
T  113861 aatgtcattcaacatcaactatcacatgtagtttcaccgtttcaagcattccttacattcta-gtaagatagcatacacatctcatgataaatatcatat 113763  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
     |||||||||||||||||||||||||||| |||| |||||||||| || |||| |  | |||||||  ||||| ||||||  |||| |||||||||||||    
T  113762 tcaatacaatcattcattcatacaacttcccttagtcatataagagtagtcacgataaatcataagacaattggctcaag-gaacacttccgaccaaaaa 113664  T
Q  200 ccgtatcaagtg 211  Q
    || |||||||||    
T  113663 ccttatcaagtg 113652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 220
Target Start/End: Original strand, 108526 - 108739
Alignment:
Q  8 ttcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa--t 104  Q
    |||||||||||||| |  ||||||||| | || |||||| |||  | |||| | ||||||||||||||||| || ||||||||| ||||||||||||  |    
T  108526 ttcaacatcaactaccttatatagttttatcacttcaagcatttctcacattccaagtaagatagcatacatatctcatgataagcatcatatccaacat 108625  T
Q  105 acaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgta 204  Q
    | ||||||||||||||||||||||||||||||||||||||||| |||| |  | |||||||  |||||||||||  |||||||||||||  || ||| ||    
T  108626 ataatcattcattcatacaacttcacttaatcatataagaatagtcacgatgaatcataagccaattgactcaaagaaacatttccgac--aataccata 108723  T
Q  205 tcaagtggcaaccggc 220  Q
    ||||||||||| ||||    
T  108724 tcaagtggcaaacggc 108739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 18734 - 18510
Alignment:
Q  1 aatgtcattcaacatcaactatcaca-tatagtttca-ccattcaagtattctttacatcctaagtaa-gatagcatacacatttcatgataaacatcat 97  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||  |||  ||||||||||||||| |||||||||||||| ||| |||||| |||||    
T  18734 aatgtcattcaacatcaactatcacaatatagtttcatccattcaaacatttcttacatcctaagtaaagatagcatacacatctcacgataaatatcat 18635  T
Q  98 atccaa--tacaatcattcattcatacaacttcacttaatcatataagaa-taatcacaaccattcataaggtaattgactcaagaaaacatttccgacc 194  Q
    ||||||  || ||||||||||||||||||||||||||| ||||| ||||| |  ||||||| |||||||||  ||||| |||||| |||||||||||| |    
T  18634 atccaaaatataatcattcattcatacaacttcacttagtcatacaagaattggtcacaacaattcataagacaattggctcaag-aaacatttccgatc 18536  T
Q  195 aaaaaccgtatcaagtggcaaccggc 220  Q
    ||||||| ||||||||||| ||||||    
T  18535 aaaaaccatatcaagtggccaccggc 18510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18881 - 18831
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattct 51  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  18881 aatgttatccaacatcaactatcacatatagtttcaccattcaagtattct 18831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 17697 - 17485
Alignment:
Q  7 attcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    ||||||||||||||||||||||||||||||||| |||||| |||  |||||| ||||||||||||||| |||||| ||||||||| |||||||||  |||    
T  17697 attcaacatcaactatcacatatagtttcaccaattcaagcatttcttacattctaagtaagatagcacacacatctcatgataatcatcatatctcata 17598  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| |  ||||  |||  |||||  || || ||||||||||||||||||||| |||    
T  17597 caatcattcattcatacaacttcacttagccatataagaatagtcaccataattcgaaagacaattggttc-aggaaacatttccgaccaaaaaccatat 17499  T
Q  206 caagtggcaaccgg 219  Q
    ||||| || |||||    
T  17498 caagttgctaccgg 17485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 220
Target Start/End: Complemental strand, 24116 - 23903
Alignment:
Q  7 attcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaata 105  Q
    |||||| ||||| |||||||||||||||||||| |||||| |||  |||||| ||||||||||||||| |||||| ||||||||| |||||||||  |||    
T  24116 attcaatatcaattatcacatatagtttcaccaattcaagcatttcttacattctaagtaagatagcacacacatctcatgataatcatcatatctcata 24017  T
Q  106 caatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtat 205  Q
    |||| |||||||||||||||||||||||  ||||||| |||| |||| |  ||||  |||  |||||  || || ||||||||||||||||||||| |||    
T  24016 caattattcattcatacaacttcacttagccatataaaaatagtcaccataattcgaaagacaattggttc-aggaaacatttccgaccaaaaaccatat 23918  T
Q  206 caagtggcaaccggc 220  Q
    |||||||| ||||||    
T  23917 caagtggccaccggc 23903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 97; Significance: 8e-48; HSPs: 4)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 7957 - 7781
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||| |||| ||||| ||||||||||| || | |||| |||||| ||||||| |||| ||||||||| ||||||||||||||||||    
T  7957 aatgtcattcaacatcaattatctcatatggtttcaccatttcatgcattccttacattctaagtaggatatcatacacatctcatgataaacatcatat 7858  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactc 176  Q
     ||||| ||| ||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||| ||||||||||||    
T  7857 tcaatataataattcattcatacaactttacttagtcatataagaatagtcacaacaattcatacggtaattgactc 7781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 13346 - 13170
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||| |||| ||||| ||||||||||| || | |||| |||||| ||||||| |||| ||||||||| ||||||||||||||||||    
T  13346 aatgtcattcaacatcaattatctcatatggtttcaccatttcatgcattccttacattctaagtaggatatcatacacatctcatgataaacatcatat 13247  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactc 176  Q
     ||||| ||| ||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||| ||||||||||||    
T  13246 tcaatataataattcattcatacaactttacttagtcatataagaatagtcacaacaattcatacggtaattgactc 13170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 20249 - 20351
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||   ||||| |||| ||||||||||||||||||| || ||||||||||||||||||    
T  20249 aatgtcattcaacatcaactatcacatatagtttcaccaattcaacatttctt-acattctaagtaagatagcatacatatctcatgataaacatcatat 20347  T
Q  100 ccaa 103  Q
    ||||    
T  20348 ccaa 20351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18165 - 18267
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  |||  |||||| ||| ||||||||||||||| || ||||||||||||||||||    
T  18165 aatgtcattcaacatcaactatcacatatagtttcaccaattcaa-catttcttacattctaggtaagatagcatacatatctcatgataaacatcatat 18263  T
Q  100 ccaa 103  Q
    ||||    
T  18264 ccaa 18267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 52578 - 52361
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| |||| |||||| ||| |||||||||||||||| |  |||||||||||||||||    
T  52578 aatgtcattcaacatcaactatcacatacagtttcaccatttcaagcattcattacattcta-gtaagatagcatacacctcccatgataaacatcatat 52480  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |  ||||||||||||| ||||| |||||||| |  ||||||||||||  ||||||| |||||||||  ||||| |||||| |||||||||||| |  |||    
T  52479 cggatacaatcattcaatcatataacttcaccttgtcatataagaatggtcacaacaattcataagacaattggctcaag-aaacatttccgatc-caaa 52382  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||||| ||||    
T  52381 ccatatcaagtggcaaacggc 52361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 56530 - 56313
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| |||| |||||| ||| |||||||||||||||| |  |||||||||||||||||    
T  56530 aatgtcattcaacatcaactatcacatacagtttcaccatttcaagcattcattacattcta-gtaagatagcatacacctcccatgataaacatcatat 56432  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
    |  ||||||||||||| ||||| |||||||| |  ||||||||||||  ||||||| |||||||||  ||||| |||||| |||||||||||| |  |||    
T  56431 cggatacaatcattcaatcatataacttcaccttgtcatataagaatggtcacaacaattcataagacaattggctcaag-aaacatttccgatc-caaa 56334  T
Q  200 ccgtatcaagtggcaaccggc 220  Q
    || ||||||||||||| ||||    
T  56333 ccatatcaagtggcaaacggc 56313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 92; Significance: 8e-45; HSPs: 3)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 935 - 1077
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  935 cattcaacatcaactatcacatatagtttcaccatccaagcattccttacattctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 1034  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||    
T  1035 tataatcactcattcatacaacttcacttagtcatacaagaat 1077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 15191 - 15333
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||| |||||||| ||| |||||| || ||||||||||||||||||||  ||    
T  15191 cattcaacatcaactatcacatatagtttcaccatccaagcattccttacattctaagtaaaataacatacatatctcatgataaacatcatatccaaaa 15290  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||    
T  15291 tataatcactcattcatacaacttcacttagtcatacaagaat 15333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 12021 - 12129
Alignment:
Q  111 attcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatcaagt 210  Q
    ||||||||||||||||||||||| ||||| ||||||  ||||||  | |||||||  ||||| || ||| ||||||||||||| |||| ||  |||| ||    
T  12021 attcattcatacaacttcacttagtcatacaagaatggtcacaataactcataagacaattggctgaag-aaacatttccgacaaaaatccaaatcatgt 12119  T
Q  211 ggcaaccggc 220  Q
    ||||| ||||    
T  12120 ggcaaacggc 12129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 197 - 345
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||||| || ||||||||| ||||||||    
T  197 aatgtcattcaacatcaactatcacatatagtttcaccatttcaaggattccttacattctaagtaagatagcatacatatctcatgataatcatcatat 296  T
Q  100 cc--aatacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    ||  |||||| ||||||| ||||||||||||||||| ||||| ||||||    
T  297 ccaaaatacattcattcactcatacaacttcacttagtcatacaagaat 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 48 - 86
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  48 aatgttattcaacatcaactatcacatatagtttcacca 86  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23931 - 24128
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||| ||||| | |||||||| | |||| |||  ||||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  23931 aatgtcattcaacatcaactataacatacaatttcaccagtacaagcatttcttacatcctaagtaagatagcatactcatctcatgatgaacatcatat 24030  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
     ||||||||||||||| ||||||||||||||||| | ||| ||||||| || | || || ||||||  ||||| ||||||  ||||||||||||||||||    
T  24031 tcaatacaatcattcaatcatacaacttcacttagttatacaagaatagtctccacaatccataagacaattggctcaag--aacatttccgaccaaaaa 24128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 17618 - 17764
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatcc--aa 103  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||| |||||  ||||||||||||||||||| || ||||||||||||||||||||  ||    
T  17618 cattcaaaatcaactatcacatatagtttcaccatccaagcattccttacagtctaagtaagatagcatacatatctcatgataaacatcatatccaaaa 17717  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
    || ||||| ||||||||||||||||||||| ||||| ||||||||||    
T  17718 tataatcactcattcatacaacttcacttagtcatacaagaataatc 17764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17505 - 17545
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  17505 aatgtcattcaacatcaactatcatatatagtttcaccatt 17545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 767 - 984
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||| ||||||| |||||||||| |||||| |||| |||  |||||  |||||||||| | ||||||||| || ||| |  |||||||     
T  767 aatgtcattcaacattaactatctcatatagttttaccatttcaagcatttcttacagtctaagtaagagaacatacacatctcgtgacattcatcatac 866  T
Q  100 cca--atacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaa 197  Q
    |||  ||||||||||||||||||||||||||||||| || |||||||||| |||| |  | |||||||  ||||| ||||||  ||||||||||||||||    
T  867 ccaccatacaatcattcattcatacaacttcacttagtcgtataagaatagtcacgataaatcataagacaattggctcaag--aacatttccgaccaaa 964  T
Q  198 aaccgtatcaagtggcaacc 217  Q
    ||||||||||||||||||||    
T  965 aaccgtatcaagtggcaacc 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 54488 - 54653
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||  |||| |||||| ||| |||||||||||||||||| || ||| |||||||||||    
T  54488 aatgttattcaacatcaactatcacatatagtttcaccaattcaac-attccttacattcta-gtaagatagcatacacatctcctgagaaacatcatat 54585  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||  |||||||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||    
T  54586 ccaaaatacaatcattcattcatacaacttcacttagtcatacaagaatggtcacaacaattcataag 54653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 109385 - 109344
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  109385 aatgtcattcaacatcaactatatcatatagtttcaccattc 109344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 14645 - 14590
Alignment:
Q  93 atcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    |||||||||||  || ||||| ||||||||||||||||||||| ||||| ||||||    
T  14645 atcatatccaacatataatcactcattcatacaacttcacttagtcatacaagaat 14590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 2882 - 2740
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa-- 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| || ||||| |||| |||||||||||      
T  2882 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctaagtaagatagcatacatatctcatggtaaaaatcatatccaaag 2783  T
Q  104 tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    || ||||| |||||||||||||| |||||| ||||| ||||||    
T  2782 tataatcactcattcatacaactccacttagtcatacaagaat 2740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2994 - 2958
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcac 37  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  2994 aatgtcattcaacataaactatcacatttagtttcac 2958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5913 - 5770
Alignment:
Q  1 aatgtcattcaa-catcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcata 98  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||   ||  ||||||||||||||||||||||||||||| |||||||||  ||||||    
T  5913 aatgtcattcaatcatcaactatcacatatagtttcaccaattcaaacctttcttacatcctaagtaagatagcatacacatctcatgataattatcata 5814  T
Q  99 tccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||    
T  5813 tccaaaacaatcattcattcatacaacttcacttagttatataa 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 27880 - 28028
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||| |||||  | || | |||||||||||| ||||||| ||||||||||||||||||    
T  27880 aatgtcattcaacatcaactatcacaaatagtt-caccaattcaagcattctc-atattccaagtaagatagcctacacatctcatgataaacatcatat 27977  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatc 150  Q
     ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  27978 tcaatacaatcattcattcatacaacttcacttagtcatacaagaataatc 28028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 11229 - 11062
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||  |||| |||||||  |||||||||||||||||| | |||||||||  | ||||     
T  11229 aatgtcattcaacatcaactatcacatatagattcaccaattcaaacattccttacatctcaagtaagatagcatacacttctcatgataattaccataa 11130  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataag 165  Q
    ||||  ||||||| |||||||||||||||||||||| ||||||||||||  ||||||| |||||||||    
T  11129 ccaaaatacaatctttcattcatacaacttcacttagtcatataagaattgtcacaacaattcataag 11062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 8291 - 8424
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||||||| |||||||| |||||  ||   |||||||||| |||||||| ||||||||| |||||||||| ||| |||    
T  8291 aatgtcattcaacatcaactatcacatataatttcaccaattcaaacatatcttacatcctaggtaagataacatacacatctcatgataaatatcttat 8390  T
Q  100 ccaatacaatcattcattcatacaacttcactta 133  Q
    |||| |||||||||||||||||||||||||||||    
T  8391 ccaacacaatcattcattcatacaacttcactta 8424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 18263 - 18410
Alignment:
Q  72 catacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaatt 171  Q
    ||||||||| ||||||||||||||||||||||  |||||||||| ||||||||||||| ||| |||||||||||||  || ||| |||||||||  ||||    
T  18263 catacacatctcatgataaacatcatatccaaatcaatcattcaatcatacaacttcagttagtcatataagaataggcataacaattcataagacaatt 18362  T
Q  172 gactcaagaaaacatttccgaccaaaaaccgtatcaagtggcaaccggc 220  Q
    | |||||| |||||||||||||||||| || ||||||||||||| ||||    
T  18363 ggctcaag-aaacatttccgaccaaaatccatatcaagtggcaaacggc 18410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30046 - 30127
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatt 81  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||  || |||||||||||||||||||||||||||    
T  30046 aatgtcattcaacatcaactatcacatatagtttcaccaattcaagcatttcttgcatcctaagtaagatagcatacacatt 30127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 145784 - 146005
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||| |||| |||||| |||||||||| |||| |||||| |||  |||||| |||||||||| | ||||||||| ||||||||| ||||||||    
T  145784 aatgtcattca-catccactatctcatatagttttaccaattcaagaatttcttacattctaagtaagagaacatacacatctcatgataatcatcatat 145882  T
Q  100 ccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccga-ccaa 196  Q
    ||||  |||||||||||||| ||||||||||||||| ||||||||||||| |||| |     |||||| |||||||||| ||  ||| ||| ||| ||||    
T  145883 ccaacatacaatcattcatttatacaacttcacttagtcatataagaatagtcacgatagaacataagataattgactcgag-gaacgttttcgacccaa 145981  T
Q  197 aaaccgtatcaagtggcaaccggc 220  Q
    ||||||||||||||||||| ||||    
T  145982 aaaccgtatcaagtggcaaacggc 146005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 21517 - 21696
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||                    ||||||    
T  21517 aatgtcattcaacatcaactatcacatatagtttcaccattaaagcattccttacattctaagtaagatagcat--------------------catatc 21596  T
Q  101 caatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||| || | |||||||  ||||| |||||| |||||||||||||| |||||    
T  21597 caatacaatcattcattcatacaacttcacttaatcatataagaatgggcacgacaaatcataagacaattggctcaag-aaacatttccgacccaaaac 21695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 129451 - 129390
Alignment:
Q  72 catacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcactta 133  Q
    ||||||||| |||||||| ||||||||||  | | |||||||||||||||||||||||||||    
T  129451 catacacatctcatgatagacatcatatctcacataatcattcattcatacaacttcactta 129390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 1672 - 1575
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaa 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| | ||||||||||||| || ||||||||||||||||||||||    
T  1672 cattcaacatcaactatcacatatagtttcaccattcaagcattccttacattctatgcaagatagcatacatatctcatgataaacatcatatccaa 1575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 2761 - 2540
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||| | |||||||||| |||||| |||  ||| ||||||| |||||| ||| |  ||||| |||  |||||||||||||||     
T  2761 aatgtcattcaacatcaactacctcatatagttttaccatttcaaacattttttacattctaagttagagaaaatacaacatcccatgataaacatcatg 2662  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaa 196  Q
    |||||  || ||||||||| ||||||||||||||||| ||||||||||||| |||  |  |||||||||   ||||||||||   ||||||||||||  |    
T  2661 tccaacatataatcattcactcatacaacttcacttagtcatataagaatagtcatgataattcataagccgattgactcaaaggaacatttccgac--a 2564  T
Q  197 aaaccgtatcaagtggcaaccggc 220  Q
    | ||||||||||||||||| ||||    
T  2563 ataccgtatcaagtggcaaacggc 2540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 14556 - 14350
Alignment:
Q  13 catcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatatccaatacaatca 111  Q
    ||||||||||||||||||||||||||| |||||   ||||| |||| |||||||||||| |||||||||  ||||||||| ||||||||||| |||||||    
T  14556 catcaactatcacatatagtttcaccaattcaacatttctt-acattctaagtaagataacatacacatcccatgataaatatcatatccaaaacaatca 14458  T
Q  112 ttcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatcaagtg 211  Q
    | ||||||||| |||||||||| | ||||||  ||| |||| || |||| || |  |||||  ||||| |||| |||  ||||||||||| | |||||||    
T  14457 tccattcataccacttcacttagttatataaacatagtcaccacaattcttaggacaattggttcaag-aaacgtttttgaccaaaaaccatgtcaagtg 14359  T
Q  212 gcaaccggc 220  Q
    || ||||||    
T  14358 gctaccggc 14350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28356 - 28394
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  28356 aatgttattcaacatcaactatcacatatagtttcacca 28394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40352 - 40390
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  40352 aatgttattcaacatcaactatcacatatagtttcacca 40390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28505 - 28545
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  28505 aatgtcattcaacatcaattatcacatataatttcaccatt 28545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40501 - 40541
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||| ||||| ||||||||||| ||||||||||    
T  40501 aatgtcattcaaaatcaaatatcacatataatttcaccatt 40541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 53462 - 53593
Alignment:
Q  86 gataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaaca 185  Q
    ||||||||||| || ||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||||||  ||||| || ||| |||||    
T  53462 gataaacatcacattcaa-acaatcattcaatcatacaacttcacttagtcatataagaatagtcacaacaattcataagacaattggcttaag-aaaca 53559  T
Q  186 tttccgaccaaaaaccgtatcaagtggcaaccggc 220  Q
    ||||||||| |||||||| ||||||||||| ||||    
T  53560 tttccgacc-aaaaccgtgtcaagtggcaaacggc 53593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 53163 - 53203
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  53163 aatgttatccaacatcaactatcacatatagtttcaccatt 53203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 248843 - 248741
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    |||||||||||||||||||||||||| |||||||||||| |||||   ||||| |||| ||||||||||||||||||| || ||||||||||||||||||    
T  248843 aatgtcattcaacatcaactatcacaaatagtttcaccaattcaacatttctt-acattctaagtaagatagcatacatatctcatgataaacatcatat 248745  T
Q  100 ccaa 103  Q
    ||||    
T  248744 ccaa 248741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 6751 - 6906
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||| | |||||||| | | |||| |||| |||  |||| | |||||||||| | | |||| |||| ||||||||||||||||    
T  6751 aatgtcattcaacatcaactacctcatatagtcttatcatttcaagcatttcttacgttctaagtaagagaacttacaacattccatgataaacatcata 6850  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    |||||  || ||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  6851 tccaacatataatcattcattcatacaacttcacttagtcatatatgaatagtcac 6906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14538 - 14613
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcata 75  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||||||||||||||||||||||    
T  14538 aatgtcattcaacatcaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaagatagcata 14613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 2287 - 2442
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcata 98  Q
    ||||||||||||||||||||| | |||||||| | | |||| |||| |||  |||| | |||||||||| | | |||| |||| ||||||||||||||||    
T  2287 aatgtcattcaacatcaactacctcatatagtcttatcatttcaagcatttcttacgttctaagtaagagaacttacaacattccatgataaacatcata 2386  T
Q  99 tccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcac 152  Q
    |||||  || |||||||||||||||||||||| |||| ||||||| ||||| ||||    
T  2387 tccaacatataatcattcattcatacaacttctcttagtcatatatgaatagtcac 2442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 59581 - 59675
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt-caagtattctttacatcctaagtaagatagcatacacatttcatgataaacat 94  Q
    |||||||||||||||||| ||||  |||||||||||||||| |||  |||| |||||| |||||||||||| ||||||||| |||||||||||||    
T  59581 aatgtcattcaacatcaattatcttatatagtttcaccatttcaaacattccttacattctaagtaagatatcatacacatctcatgataaacat 59675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 2880 - 2723
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc--aagtattctttacatcctaagtaagatagcataca-catttcatgataaacatcat 97  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||  |||||  | |||| |||||||| | |||||| ||| |||||| ||| |||||    
T  2880 aatgtcattcaacatcaactatatcatatagtttcaccattccaaacaattctc-atatcccaagtaagagaacatacaacatctcatgacaaatatcat 2782  T
Q  98 atccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    ||||||  || || || || |||||||||||||||||| ||||| ||||||||||||||    
T  2781 atccaacatataaccactccttcatacaacttcacttagtcatacaagaataatcacaa 2723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32441 - 32541
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcata 98  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||  | |||| |||||||||| | ||||| |||| |||||||||| ||||||    
T  32441 aatgtcattcaacatcaactatcacatgtagtttcaccatttcaagtatttctcacattctaagtaagagaacatacaacatctcatgataaatatcata 32540  T
Q  99 t 99  Q
    |    
T  32541 t 32541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold1140
Description:

Target: scaffold1140; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 2085 - 2152
Alignment:
Q  75 acacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| | ||||||    
T  2085 acacatctcatgataaacatcatatgcaatataatcattcattcatacaacttcacttagttatataa 2152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2040 - 2078
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  2040 aatgttattcaacatcaactatcacatatggtttcacca 2078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 1884 - 1817
Alignment:
Q  109 tcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactc 176  Q
    |||| |||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  1884 tcatacattcatacaactttacttagtcatataagaatagtcacaacaattcataaggtaattgactc 1817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 698 - 505
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacc-attcaagtattctttacatcctaagtaagatagcatacacatttcatgataaacatcatat 99  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||| |||  |||||||||||||||||||| |||| ||| |                     
T  698 aatgtcattcaacgttaactatcacatatagtttcaccaattcaagcatttcttacatcctaagtaagatagtatactcatct----------------- 616  T
Q  100 ccaatacaatcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaa 199  Q
     ||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||| || | ||||  ||||| || ||| || ||||||||||| ||||    
T  615 -caatacaatcattcattcatacaacttcgtttagtcatataagaatattcacaacaatccctaagacaattggcttaag-aagcatttccgacctaaaa 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 41677 - 41737
Alignment:
Q  6 cattcaacatcaactatcacatatagtttcaccattcaagtattctttacatcctaagtaa 66  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||||||    
T  41677 cattcaacatcaactatcacatatagtttcaccatccaagcattccttacattctaagtaa 41737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41565 - 41605
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccatt 41  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  41565 aatgtcattcaacatcaattatcacatatagtttcaccatt 41605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1753 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1753
Description:

Target: scaffold1753; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 319 - 467
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca-ttcaagtattctttacatcctaagtaagatagcatac-acatttcatgataaacatcata 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||   | || | |||||| |    | || |||| |||||||||||||||||    
T  319 aatgtcattcaacatcaactatcacatatagtttcaccatttcaagcattc-ccatattccaagtaataggaaaaacaacatctcatgataaacatcata 417  T
Q  99 tcc--aatacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    |||  |||  ||||| ||||||||||||||||||||| ||||| ||||||    
T  418 tccaaaatcaaatcactcattcatacaacttcacttagtcatacaagaat 467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 5619 - 5515
Alignment:
Q  109 tcattcattcatacaacttcacttaatcatataagaataatcacaaccattcataaggtaattgactcaagaaaacatttccgaccaaaaaccgtatcaa 208  Q
    |||||| |||||||||||||||||| |||||||||||||||| | |  |  | ||||  ||||| |||||| ||||||||| |||||||||| |||||||    
T  5619 tcattcgttcatacaacttcacttagtcatataagaataatcgcgataaaacctaagacaattggctcaag-aaacatttctgaccaaaaactgtatcaa 5521  T
Q  209 gtggca 214  Q
    ||||||    
T  5520 gtggca 5515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 7890 - 7960
Alignment:
Q  72 catacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||||| |||||||| ||||||||||  | | ||||||||||||||||||||||||||| | ||||||    
T  7890 catacacatctcatgatagacatcatatctcacataatcattcattcatacaacttcacttagttatataa 7960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6453 - 6415
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6453 aatgtcattcaacatcaactatcacatatagtttcacca 6415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 6400 - 6332
Alignment:
Q  74 tacacatttcatgata-aacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||| |||||||||||||  | ||||||||||||||||||||||||||| | ||||||    
T  6400 tacacatctcatgatagaacatcatatccac-ataatcattcattcatacaacttcacttagttatataa 6332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 40502 - 40559
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcact 131  Q
    |||||||||||||||| ||||||||||| | | |||||||||||||||||||| ||||    
T  40502 tacacatttcatgatatacatcatatcccacataatcattcattcatacaactccact 40559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 21581 - 21660
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| |   ||||||||||||||||| ||||| ||||||||||||||    
T  21581 acatgtcatgataaacatcatatccaaaatataatcacttcctcatacaacttcacttagtcatacaagaataatcacaa 21660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 25836 - 25915
Alignment:
Q  77 acatttcatgataaacatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaataatcacaa 154  Q
    |||| ||||||||||||||||||||||  || ||||| |   ||||||||||||||||| ||||| ||||||||||||||    
T  25836 acatctcatgataaacatcatatccaaaatataatcacttcctcatacaacttcacttagtcatacaagaataatcacaa 25915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 4699 - 4734
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttca 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  4699 aatgtcattcaacatcaactatcacatatagtttca 4734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 331021 - 330964
Alignment:
Q  91 acatcatatccaa--tacaatcattcattcatacaacttcacttaatcatataagaat 146  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| ||||| ||||||    
T  331021 acatcatatccaaaatacattcattcattcatacaacttcacttagtcatacaagaat 330964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 413 - 446
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagttt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  413 aatgtcattcaacatcaactatcacatatagttt 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 4849 - 4788
Alignment:
Q  72 catacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcactta 133  Q
    ||||||||| |||||||| ||||||| ||  | | |||||||||||||||||||||||||||    
T  4849 catacacatctcatgatagacatcatttctcacataatcattcattcatacaacttcactta 4788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17394 - 17353
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcaccattc 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  17394 aatgtcattcaacatcaactatatcatatagtttcaccattc 17353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 27763 - 27696
Alignment:
Q  74 tacacatttcatgataaacatcatatccaatacaatcattcattcatacaacttcacttaatcatataa 142  Q
    ||||||| |||||||| ||||||||||||  | |||||||||||||||||||| |||||| | ||||||    
T  27763 tacacatctcatgatagacatcatatccac-ataatcattcattcatacaactgcacttagttatataa 27696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 27816 - 27781
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttca 36  Q
    |||||||||||||||||||| |||||||||||||||    
T  27816 aatgtcattcaacatcaactttcacatatagtttca 27781  T

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Target: scaffold0125 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34428 - 34466
Alignment:
Q  1 aatgtcattcaacatcaactatcacatatagtttcacca 39  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  34428 aatgttattcaacattaactatcacatatagtttcacca 34466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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