View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10865A_low_424 (Length: 220)
Name: NF10865A_low_424
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_low_424 |
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Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 33649866 - 33650050
Alignment:
| Q |
16 |
acaatatttggatatgagattgatagatccaaatttcaatacatgatttgattatttaaagnnnnnnnnnnnctaaaataccgagtttaaaatcgttagc |
115 |
Q |
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| T |
33649866 |
acaatatttggatatgagattgatagatccaaatttcaatacatgatttgattatttaaagaaaaaaaaaa-ctaaaataccgagtttaaaatcgttagc |
33649964 |
T |
|
| Q |
116 |
gtccgattttgatccaacggttaaatttcatatcttggtgggtctaacaatgactacttcaattttaagctctaattgcatcttcc |
201 |
Q |
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| T |
33649965 |
gtccgattttgatccaacggttaaatttcatatcttggtgggtctaacaatgactacttcaattttaagctctaattgcatcttcc |
33650050 |
T |
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