View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10865A_low_53 (Length: 394)
Name: NF10865A_low_53
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_low_53 |
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Alignment Details
Target: chr6 (Bit Score: 300; Significance: 1e-168; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 7 - 369
Target Start/End: Original strand, 26313168 - 26313530
Alignment:
| Q |
7 |
atttataatgaatatgattcgatcaatccaaatcgaattgactacgatgcaccattgcatgaaatttgatcatttctaatgtatgaaatctaggctagag |
106 |
Q |
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| T |
26313168 |
atttataatgaatatgattcgatcaatccaaatcgaattgactacgatgcgccattgcatgaaatttgatcatttctaatatatgaaatctaggttagag |
26313267 |
T |
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| Q |
107 |
gtaatgactagctttagtctttccccgtgtaccttttctagggcataaccttcatttataatgtttatgagtgtactaaattttgaagtatcgagtttga |
206 |
Q |
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| T |
26313268 |
gtaatgactagctttagtccttccccgtgcaccttttctagggcataatcttcatttataatgtttatgagtgttgtaaattttgaagtatcgagtttga |
26313367 |
T |
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| Q |
207 |
ct-ctacagataaaaattctaacggaatatgagacaattttgatcaaagaactacaatcacttctcaatttctaaatcgaatttaatctatagtgtcaat |
305 |
Q |
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| T |
26313368 |
ctcctacagataaaaattctaacggaatatgagacaattttgatcaaagaactacaatcacttctcaatttttaaatcgcatttaatctttagtgtcaat |
26313467 |
T |
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| Q |
306 |
gcaaagccaaattctcaactaaaaaatattttgaactagattttcatgcaacattatgcctaat |
369 |
Q |
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| T |
26313468 |
gcaaagccaaa-cctcaactaaaaaatattttgaactagattttcatgcaacattatgcctaat |
26313530 |
T |
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