View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10865A_low_87 (Length: 355)
Name: NF10865A_low_87
Description: NF10865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10865A_low_87 |
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Alignment Details
Target: chr1 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 49751440 - 49751564
Alignment:
| Q |
100 |
aatataaacttgagaaacctgaaaagtccttgatctcatcatctacaagcttcccagcaatgaaaacagtgttaacaggtaaaccaggtccaaacgcagg |
199 |
Q |
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| T |
49751440 |
aatataaacttgagaaacctgaaaagtccttgatctcatcatctacaagcttcccagcaatgaaaacagtgttaacaggtaaaccaggtccaaacgcagg |
49751539 |
T |
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| Q |
200 |
ttcctttacatacttatgaaacttc |
224 |
Q |
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||||||||||||||||||||||||| |
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| T |
49751540 |
ttcctttacatacttatgaaacttc |
49751564 |
T |
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