View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10868_high_5 (Length: 250)
Name: NF10868_high_5
Description: NF10868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10868_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 31692346 - 31692105
Alignment:
| Q |
1 |
tgaattgagattttgaaccgatgaatcgtttttcttcaagcgagctatttccttagttacatgcttcaactcatttcttataacatccatagaagccata |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
31692346 |
tgaattgagattttgaaccgatgaatcgtttttcttcaagcgagctatttccttagttacatgcttcagctcatttcttataacatccatagaagccata |
31692247 |
T |
|
| Q |
101 |
aactgaaaaccttcatctctaatcaaagctaattcttttattgcggcctcaagttcctcctttacagtttgtaactcggtagagtctcctgattcgtcac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31692246 |
aactgaaaaccttcatctctaatcaaagctaattctttcgttgcggcctcaagttcctcctttacagtttgtaactcggtagagtctcctgattcgtcac |
31692147 |
T |
|
| Q |
201 |
cttttcttaaacttccttccaatagtttcacactttcatctc |
242 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
31692146 |
cttttcttaaacttccttccaatagtttcacactttcatctc |
31692105 |
T |
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