View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10868_low_26 (Length: 239)
Name: NF10868_low_26
Description: NF10868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10868_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 34859896 - 34860118
Alignment:
| Q |
1 |
aatctcggttaacttcaattcgaagtcaataataaccagacaaggaactcaagtttctccaaatgctccggttaattttctatatggtacatgttaatga |
100 |
Q |
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| T |
34859896 |
aatctcggttaacttcaattcgaagtcaataataaccagacaagggactcaagtttctccaaatgccccggttaattttctatatggtacatgttaatga |
34859995 |
T |
|
| Q |
101 |
tgttatccaccaagtaaagattgtctgtatttacatgctaacattttcatggaattcagattctaagagacctgcggtgatgttgagtacacatagaatg |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34859996 |
tgttatccaccaagtaaagattgtttgtatttacatgctaacattttcatggaattcagattctaagagacctgcggtgatgttgagtacacatagaatg |
34860095 |
T |
|
| Q |
201 |
aggacaaaagatcacaaaattca |
223 |
Q |
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||||||||||||||||| ||||| |
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| T |
34860096 |
aggacaaaagatcacaatattca |
34860118 |
T |
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