View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1086_high_5 (Length: 319)
Name: NF1086_high_5
Description: NF1086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1086_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 30 - 307
Target Start/End: Complemental strand, 45429609 - 45429332
Alignment:
| Q |
30 |
gtactggtaagtgttacttgagcatgctcttttgattttgtacaacttatttcttacaattacatacaattcgtgctggttaaacttagtttcataccca |
129 |
Q |
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| T |
45429609 |
gtactggtaagtgttacttgagcatgctcttttgattttgtacaacttatttcttacaattacatacaattcgtgctggttaaacttagtttcataccca |
45429510 |
T |
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| Q |
130 |
aaattactcttttgctttgcagggtatgttttgtagaagtttatctgaaattttctaaatgagaatcaactatttgatgttatgttcaaaatgtaaattg |
229 |
Q |
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|||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45429509 |
aaatcactcttttgctttgtagggtatgttttgtagaagtttatctgaaattttctaaatgagaatcaactatttgatgttatgttcaaaatgtaaattg |
45429410 |
T |
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| Q |
230 |
ataagaatttaattagcatactctgatgttagtgtatatttattttacacaagcatcaaatgatttgttgccatgtca |
307 |
Q |
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| T |
45429409 |
ataagaatttaattagcatactctgatgttagtgtatatttattttacacatgcatcaaatgatttgttgccatgtca |
45429332 |
T |
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