View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1086_high_6 (Length: 292)
Name: NF1086_high_6
Description: NF1086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1086_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 278
Target Start/End: Complemental strand, 45429057 - 45428797
Alignment:
| Q |
18 |
gtcattccctccaaaatgctgcattcaaacatgcccttttcgtgttgtgttttttgcctttacattttatcattttccagtctctaatgtataatgaagg |
117 |
Q |
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| T |
45429057 |
gtcattccctccaaaatgctgcattcaaacatgcccttttcgtgttttgttttttgcctttacattttatcattttccagtctctaatgtataatgaagg |
45428958 |
T |
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| Q |
118 |
tgacatcacaagaactggggatcttgttgatccaatgagtggaagattctcccaactagtcagaaaaatgaccaacttaataatcagaccagctacacca |
217 |
Q |
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||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45428957 |
tgacatcacaagaactggggatcttgttgatccaacgcgtggaagattctcccaattagtcagaaaaatgaccaacttaataatcagaccagctacacca |
45428858 |
T |
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| Q |
218 |
gatatcatggctgaagaatctgtggtcctaattcctatgcttaaggttgttagcaatccat |
278 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
45428857 |
gatatcatggctgaagaatccgtggtcctaattcctatgcttaaggttgttagcaatccat |
45428797 |
T |
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