View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1086_low_20 (Length: 251)

Name: NF1086_low_20
Description: NF1086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1086_low_20
NF1086_low_20
[»] chr5 (51 HSPs)
chr5 (32-208)||(3735313-3735489)
chr5 (48-175)||(40489309-40489436)
chr5 (48-175)||(39918479-39918606)
chr5 (20-161)||(31644390-31644531)
chr5 (20-175)||(41790459-41790615)
chr5 (48-175)||(2351652-2351779)
chr5 (48-175)||(32528687-32528814)
chr5 (20-208)||(32092946-32093133)
chr5 (48-208)||(34794859-34795019)
chr5 (53-208)||(21739125-21739280)
chr5 (37-175)||(39788153-39788292)
chr5 (48-174)||(4818138-4818264)
chr5 (20-161)||(24036176-24036315)
chr5 (37-175)||(31880073-31880211)
chr5 (20-161)||(4689709-4689850)
chr5 (48-161)||(7208241-7208354)
chr5 (53-174)||(22493417-22493537)
chr5 (56-208)||(7523152-7523304)
chr5 (48-174)||(553368-553495)
chr5 (32-174)||(18470426-18470568)
chr5 (48-174)||(28090518-28090644)
chr5 (32-161)||(7770290-7770419)
chr5 (51-208)||(17031132-17031289)
chr5 (48-161)||(41459561-41459674)
chr5 (48-208)||(29241350-29241510)
chr5 (48-175)||(24181621-24181748)
chr5 (20-174)||(8560980-8561133)
chr5 (48-174)||(11963313-11963439)
chr5 (53-175)||(35701254-35701376)
chr5 (37-174)||(6311658-6311794)
chr5 (48-161)||(40182436-40182549)
chr5 (53-161)||(700612-700720)
chr5 (48-175)||(31770588-31770715)
chr5 (48-161)||(5571655-5571766)
chr5 (48-174)||(23091302-23091428)
chr5 (48-160)||(6284310-6284423)
chr5 (65-162)||(27839083-27839180)
chr5 (53-161)||(5673121-5673224)
chr5 (48-174)||(7725807-7725933)
chr5 (91-175)||(8136852-8136936)
chr5 (56-175)||(22432306-22432425)
chr5 (56-118)||(612520-612582)
chr5 (38-175)||(35760622-35760761)
chr5 (48-130)||(8360395-8360476)
chr5 (57-117)||(1338601-1338661)
chr5 (20-92)||(32313782-32313854)
chr5 (91-137)||(5598495-5598541)
chr5 (37-106)||(35954974-35955044)
chr5 (94-179)||(11090861-11090946)
chr5 (38-117)||(24206332-24206412)
chr5 (32-76)||(40563829-40563873)
[»] chr2 (57 HSPs)
chr2 (37-208)||(7761531-7761702)
chr2 (48-197)||(16104246-16104395)
chr2 (20-208)||(41366068-41366253)
chr2 (29-174)||(25383084-25383235)
chr2 (48-161)||(37003873-37003986)
chr2 (48-208)||(5278792-5278952)
chr2 (48-208)||(33366582-33366742)
chr2 (48-175)||(2645077-2645204)
chr2 (37-175)||(19513680-19513818)
chr2 (63-185)||(26796216-26796337)
chr2 (48-174)||(44284601-44284727)
chr2 (20-208)||(32766462-32766651)
chr2 (48-175)||(17540686-17540814)
chr2 (48-208)||(32497887-32498047)
chr2 (56-208)||(42706339-42706491)
chr2 (53-160)||(9717201-9717308)
chr2 (53-208)||(35114762-35114917)
chr2 (48-174)||(9732922-9733048)
chr2 (37-175)||(33889204-33889342)
chr2 (48-208)||(7258868-7259029)
chr2 (53-174)||(26418900-26419021)
chr2 (48-208)||(34338782-34338942)
chr2 (20-161)||(40832474-40832617)
chr2 (21-208)||(6896113-6896300)
chr2 (48-159)||(30326338-30326449)
chr2 (48-174)||(41934553-41934679)
chr2 (48-161)||(4641488-4641601)
chr2 (20-208)||(37308599-37308787)
chr2 (32-175)||(13829394-13829537)
chr2 (38-173)||(18278874-18278999)
chr2 (56-174)||(12939292-12939410)
chr2 (48-174)||(18685808-18685934)
chr2 (48-161)||(12672479-12672592)
chr2 (20-161)||(45463115-45463255)
chr2 (48-208)||(10399828-10399988)
chr2 (53-161)||(30798494-30798602)
chr2 (48-175)||(3913451-3913578)
chr2 (105-208)||(38623262-38623365)
chr2 (20-161)||(2086015-2086157)
chr2 (48-175)||(40692277-40692396)
chr2 (20-161)||(27462807-27462946)
chr2 (48-130)||(18793297-18793379)
chr2 (38-175)||(1230873-1231010)
chr2 (100-161)||(1247171-1247232)
chr2 (48-161)||(11114844-11114957)
chr2 (20-117)||(20907533-20907630)
chr2 (20-152)||(35473014-35473146)
chr2 (48-208)||(42365549-42365709)
chr2 (58-161)||(16177888-16177991)
chr2 (20-175)||(28824548-28824703)
chr2 (48-175)||(38993062-38993189)
chr2 (48-160)||(39461286-39461401)
chr2 (51-130)||(7294427-7294506)
chr2 (32-175)||(30712813-30712959)
chr2 (51-114)||(31148784-31148847)
chr2 (73-130)||(16062130-16062186)
chr2 (94-174)||(26981701-26981781)
[»] chr4 (93 HSPs)
chr4 (21-175)||(3649584-3649738)
chr4 (165-251)||(842193-842279)
chr4 (48-208)||(33552793-33552953)
chr4 (48-208)||(23521855-23522015)
chr4 (20-208)||(44324293-44324481)
chr4 (48-208)||(50727864-50728024)
chr4 (48-208)||(50735878-50736038)
chr4 (37-208)||(21579990-21580161)
chr4 (48-175)||(43641074-43641201)
chr4 (21-162)||(22318381-22318522)
chr4 (48-197)||(32181238-32181387)
chr4 (48-208)||(9807131-9807290)
chr4 (48-208)||(33176983-33177143)
chr4 (37-161)||(47642489-47642613)
chr4 (48-208)||(55593860-55594020)
chr4 (53-176)||(1231291-1231414)
chr4 (48-208)||(24002313-24002474)
chr4 (53-208)||(36885912-36886067)
chr4 (20-174)||(37865699-37865854)
chr4 (37-175)||(2725117-2725254)
chr4 (31-161)||(41711805-41711935)
chr4 (48-161)||(29785535-29785648)
chr4 (20-133)||(41720790-41720903)
chr4 (48-161)||(56154596-56154709)
chr4 (20-208)||(24210264-24210454)
chr4 (48-208)||(49152051-49152210)
chr4 (32-175)||(50178476-50178620)
chr4 (48-175)||(9512324-9512451)
chr4 (48-175)||(20802515-20802642)
chr4 (53-208)||(38812500-38812655)
chr4 (32-175)||(52949680-52949822)
chr4 (48-175)||(55065317-55065444)
chr4 (20-137)||(29616116-29616234)
chr4 (48-174)||(37695526-37695652)
chr4 (20-174)||(43739408-43739562)
chr4 (21-174)||(53200628-53200782)
chr4 (37-174)||(38486242-38486379)
chr4 (48-197)||(54542965-54543113)
chr4 (48-188)||(2786939-2787079)
chr4 (20-175)||(44649148-44649301)
chr4 (48-208)||(46680461-46680621)
chr4 (53-208)||(4325771-4325926)
chr4 (14-64)||(842142-842192)
chr4 (53-175)||(21202720-21202841)
chr4 (57-175)||(34929899-34930017)
chr4 (59-161)||(52319309-52319411)
chr4 (48-173)||(7001829-7001952)
chr4 (48-161)||(20518020-20518133)
chr4 (48-161)||(36743686-36743799)
chr4 (32-161)||(50186487-50186616)
chr4 (48-208)||(29592870-29593030)
chr4 (48-171)||(7554945-7555068)
chr4 (32-174)||(26083297-26083440)
chr4 (48-175)||(36497192-36497319)
chr4 (37-208)||(39078625-39078796)
chr4 (48-130)||(14296572-14296654)
chr4 (48-130)||(14314820-14314902)
chr4 (53-175)||(20694351-20694473)
chr4 (92-161)||(28115271-28115340)
chr4 (38-174)||(9947894-9948030)
chr4 (53-175)||(23327897-23328021)
chr4 (20-162)||(45577689-45577829)
chr4 (48-174)||(11056017-11056143)
chr4 (56-174)||(12600869-12600987)
chr4 (38-175)||(44355838-44355976)
chr4 (37-161)||(47361411-47361531)
chr4 (92-174)||(50729527-50729609)
chr4 (48-117)||(985257-985326)
chr4 (48-161)||(37931895-37932008)
chr4 (48-196)||(6776553-6776701)
chr4 (24-136)||(31445899-31446010)
chr4 (55-130)||(56487281-56487356)
chr4 (72-174)||(37859244-37859346)
chr4 (38-160)||(43189762-43189883)
chr4 (91-208)||(2629902-2630019)
chr4 (48-136)||(7381255-7381340)
chr4 (106-203)||(25978567-25978664)
chr4 (48-129)||(41261974-41262055)
chr4 (48-133)||(42772733-42772818)
chr4 (48-175)||(42869948-42870073)
chr4 (75-130)||(2858400-2858455)
chr4 (48-159)||(32858298-32858408)
chr4 (37-88)||(44640302-44640353)
chr4 (39-136)||(3579089-3579187)
chr4 (20-161)||(16320468-16320607)
chr4 (38-175)||(21098498-21098636)
chr4 (56-158)||(43893560-43893662)
chr4 (72-162)||(52673810-52673900)
chr4 (48-171)||(30942763-30942886)
chr4 (82-148)||(39513431-39513497)
chr4 (62-136)||(40792406-40792480)
chr4 (91-136)||(34559968-34560013)
chr4 (57-117)||(280187-280247)
[»] chr1 (79 HSPs)
chr1 (37-175)||(17327715-17327853)
chr1 (21-197)||(39281848-39282024)
chr1 (20-161)||(38663085-38663226)
chr1 (48-208)||(844757-844917)
chr1 (48-208)||(16476188-16476348)
chr1 (48-208)||(26118248-26118408)
chr1 (32-174)||(11772699-11772841)
chr1 (21-159)||(15539972-15540110)
chr1 (20-208)||(13994108-13994296)
chr1 (53-161)||(1601159-1601267)
chr1 (48-208)||(16386835-16386995)
chr1 (48-175)||(42510506-42510633)
chr1 (48-208)||(6711079-6711239)
chr1 (38-205)||(6771338-6771506)
chr1 (48-208)||(16451108-16451268)
chr1 (48-160)||(31004113-31004225)
chr1 (32-175)||(6029367-6029510)
chr1 (48-174)||(28340370-28340496)
chr1 (53-175)||(30105746-30105868)
chr1 (48-174)||(45490942-45491068)
chr1 (48-197)||(16437343-16437492)
chr1 (48-196)||(10384348-10384496)
chr1 (37-137)||(46154870-46154970)
chr1 (37-185)||(50382459-50382607)
chr1 (48-175)||(12890219-12890346)
chr1 (54-161)||(16704713-16704820)
chr1 (48-175)||(35387377-35387504)
chr1 (48-175)||(42512836-42512963)
chr1 (20-208)||(17887899-17888089)
chr1 (48-174)||(25539836-25539962)
chr1 (17-174)||(41967916-41968074)
chr1 (32-174)||(50304616-50304758)
chr1 (38-114)||(30798818-30798894)
chr1 (48-175)||(32270334-32270461)
chr1 (38-208)||(32289377-32289547)
chr1 (20-106)||(47092977-47093063)
chr1 (20-162)||(570339-570483)
chr1 (66-175)||(26764861-26764970)
chr1 (53-174)||(41972898-41973018)
chr1 (20-208)||(44738075-44738263)
chr1 (55-175)||(1351501-1351621)
chr1 (32-208)||(6144019-6144195)
chr1 (48-208)||(7183899-7184059)
chr1 (26-174)||(45658780-45658928)
chr1 (37-152)||(32467910-32468025)
chr1 (48-208)||(24339671-24339830)
chr1 (48-174)||(51264476-51264602)
chr1 (20-161)||(25343289-25343430)
chr1 (48-161)||(49303434-49303546)
chr1 (48-161)||(50540325-50540438)
chr1 (20-136)||(15324110-15324226)
chr1 (68-174)||(46447665-46447771)
chr1 (24-173)||(504459-504608)
chr1 (48-108)||(4895374-4895434)
chr1 (53-161)||(42705318-42705426)
chr1 (51-117)||(29032547-29032612)
chr1 (37-174)||(31574323-31574461)
chr1 (83-208)||(7837149-7837274)
chr1 (37-126)||(20495006-20495095)
chr1 (38-111)||(49799348-49799421)
chr1 (56-208)||(5109718-5109869)
chr1 (51-162)||(16862491-16862602)
chr1 (83-174)||(26733571-26733662)
chr1 (53-136)||(34663913-34663996)
chr1 (48-154)||(2761643-2761748)
chr1 (20-106)||(34283953-34284039)
chr1 (20-117)||(32215347-32215444)
chr1 (32-88)||(7836565-7836621)
chr1 (92-188)||(38087049-38087145)
chr1 (39-111)||(47242645-47242716)
chr1 (48-136)||(51703268-51703355)
chr1 (56-175)||(3414919-3415038)
chr1 (92-151)||(16643272-16643331)
chr1 (59-162)||(39792800-39792902)
chr1 (48-136)||(43310377-43310466)
chr1 (37-136)||(40856111-40856216)
chr1 (56-117)||(30104980-30105041)
chr1 (91-136)||(40610746-40610791)
chr1 (73-154)||(46815816-46815897)
[»] scaffold0181 (1 HSPs)
scaffold0181 (48-161)||(19101-19214)
[»] chr8 (65 HSPs)
chr8 (48-201)||(5968844-5968997)
chr8 (48-208)||(30542995-30543155)
chr8 (32-202)||(10656665-10656835)
chr8 (20-208)||(29563199-29563388)
chr8 (48-208)||(34063100-34063260)
chr8 (58-208)||(4052462-4052612)
chr8 (48-174)||(12753332-12753458)
chr8 (48-174)||(31732036-31732162)
chr8 (48-208)||(8673028-8673188)
chr8 (48-208)||(29672296-29672456)
chr8 (48-208)||(32019974-32020134)
chr8 (32-136)||(41548574-41548678)
chr8 (21-189)||(45114000-45114168)
chr8 (48-175)||(6386548-6386675)
chr8 (53-208)||(7394787-7394942)
chr8 (32-175)||(7591453-7591596)
chr8 (37-208)||(15001428-15001598)
chr8 (48-174)||(27103931-27104057)
chr8 (37-174)||(14005051-14005188)
chr8 (48-161)||(25478215-25478328)
chr8 (32-161)||(30501101-30501230)
chr8 (20-208)||(31513556-31513745)
chr8 (48-161)||(45446427-45446540)
chr8 (20-208)||(35225606-35225794)
chr8 (48-208)||(37618365-37618525)
chr8 (48-208)||(37664256-37664416)
chr8 (48-135)||(10531250-10531337)
chr8 (48-175)||(16595155-16595282)
chr8 (48-175)||(32303591-32303718)
chr8 (48-175)||(41709749-41709876)
chr8 (32-174)||(10467020-10467162)
chr8 (48-161)||(3251676-3251789)
chr8 (48-161)||(13406955-13407068)
chr8 (38-162)||(54133-54256)
chr8 (32-175)||(22999213-22999357)
chr8 (21-208)||(29611028-29611215)
chr8 (53-174)||(17805667-17805789)
chr8 (73-174)||(36426254-36426355)
chr8 (32-161)||(39642839-39642968)
chr8 (24-136)||(15351684-15351795)
chr8 (32-208)||(16485782-16485958)
chr8 (37-161)||(34101469-34101593)
chr8 (48-208)||(40389012-40389172)
chr8 (48-159)||(10932708-10932819)
chr8 (37-154)||(10320304-10320421)
chr8 (32-158)||(6460219-6460344)
chr8 (92-175)||(21272700-21272783)
chr8 (56-161)||(27109561-27109666)
chr8 (38-149)||(14958921-14959031)
chr8 (55-133)||(11926878-11926956)
chr8 (37-106)||(28746284-28746353)
chr8 (55-135)||(11944854-11944934)
chr8 (21-117)||(37474664-37474760)
chr8 (48-135)||(5859518-5859605)
chr8 (56-159)||(17520583-17520678)
chr8 (58-135)||(3361789-3361866)
chr8 (48-104)||(18297444-18297498)
chr8 (58-117)||(3394309-3394369)
chr8 (68-151)||(7722261-7722344)
chr8 (48-107)||(14012316-14012375)
chr8 (82-136)||(5892074-5892128)
chr8 (20-77)||(9624181-9624239)
chr8 (72-162)||(22756430-22756520)
chr8 (20-134)||(38260805-38260920)
chr8 (38-70)||(27408987-27409019)
[»] chr7 (73 HSPs)
chr7 (21-174)||(48445470-48445623)
chr7 (20-136)||(15035284-15035400)
chr7 (48-208)||(26371768-26371928)
chr7 (48-208)||(40753131-40753291)
chr7 (53-208)||(44748676-44748831)
chr7 (20-161)||(18386472-18386614)
chr7 (32-161)||(26652826-26652955)
chr7 (48-208)||(11321844-11322004)
chr7 (48-208)||(36769528-36769688)
chr7 (48-175)||(30849238-30849365)
chr7 (32-174)||(34295397-34295539)
chr7 (48-174)||(47953166-47953292)
chr7 (48-208)||(21784847-21785007)
chr7 (48-208)||(26994184-26994344)
chr7 (48-208)||(29661299-29661459)
chr7 (27-174)||(329425-329572)
chr7 (48-174)||(46633673-46633799)
chr7 (20-161)||(23349297-23349438)
chr7 (48-208)||(10932516-10932676)
chr7 (41-133)||(29992729-29992820)
chr7 (48-208)||(47316657-47316817)
chr7 (48-175)||(18470660-18470787)
chr7 (48-208)||(41211159-41211320)
chr7 (20-161)||(30599014-30599156)
chr7 (37-175)||(38301308-38301445)
chr7 (32-174)||(48699358-48699500)
chr7 (38-174)||(29372772-29372908)
chr7 (20-175)||(32873761-32873917)
chr7 (48-188)||(48894693-48894833)
chr7 (37-175)||(1870099-1870238)
chr7 (20-159)||(9913473-9913612)
chr7 (20-159)||(9927161-9927300)
chr7 (22-117)||(41903604-41903699)
chr7 (20-175)||(43368149-43368304)
chr7 (56-174)||(3922696-3922814)
chr7 (48-174)||(17237052-17237178)
chr7 (56-154)||(21133356-21133454)
chr7 (48-137)||(47947736-47947825)
chr7 (48-208)||(22724490-22724650)
chr7 (48-208)||(43158645-43158805)
chr7 (48-175)||(3892018-3892145)
chr7 (32-175)||(41665567-41665710)
chr7 (56-161)||(22631722-22631827)
chr7 (20-161)||(34117400-34117541)
chr7 (32-161)||(43213931-43214060)
chr7 (48-161)||(46408865-46408978)
chr7 (48-161)||(46448650-46448763)
chr7 (48-174)||(43189235-43189362)
chr7 (20-161)||(1363585-1363725)
chr7 (56-161)||(20127273-20127378)
chr7 (52-173)||(30052925-30053046)
chr7 (48-161)||(46627146-46627259)
chr7 (32-136)||(30259938-30260042)
chr7 (92-208)||(34519528-34519644)
chr7 (72-136)||(42332059-42332123)
chr7 (38-97)||(3359911-3359970)
chr7 (51-129)||(44668786-44668865)
chr7 (27-208)||(37966929-37967110)
chr7 (52-118)||(8083785-8083847)
chr7 (48-136)||(21408331-21408419)
chr7 (92-208)||(26910369-26910485)
chr7 (21-136)||(29455880-29455992)
chr7 (38-174)||(35645413-35645548)
chr7 (42-130)||(38360041-38360129)
chr7 (75-170)||(42072995-42073090)
chr7 (48-158)||(21408635-21408744)
chr7 (37-161)||(11250587-11250706)
chr7 (55-111)||(45063622-45063678)
chr7 (56-111)||(16963092-16963147)
chr7 (20-175)||(22724024-22724179)
chr7 (80-162)||(7958634-7958715)
chr7 (38-146)||(12098381-12098489)
chr7 (108-208)||(16963174-16963274)
[»] scaffold0169 (2 HSPs)
scaffold0169 (48-208)||(18018-18178)
scaffold0169 (48-175)||(12533-12660)
[»] chr6 (54 HSPs)
chr6 (48-208)||(10324108-10324268)
chr6 (22-204)||(7396127-7396306)
chr6 (21-175)||(10485102-10485256)
chr6 (37-175)||(32409882-32410020)
chr6 (20-208)||(2614839-2615028)
chr6 (48-208)||(17443234-17443394)
chr6 (48-175)||(3932837-3932964)
chr6 (48-161)||(17867807-17867920)
chr6 (48-161)||(17877590-17877703)
chr6 (37-161)||(24242625-24242749)
chr6 (20-175)||(10959944-10960099)
chr6 (48-175)||(11613821-11613948)
chr6 (38-208)||(29054319-29054488)
chr6 (48-174)||(34176802-34176928)
chr6 (48-201)||(18057491-18057644)
chr6 (48-208)||(14925453-14925613)
chr6 (48-175)||(3259655-3259782)
chr6 (48-175)||(24203335-24203461)
chr6 (37-135)||(7365348-7365446)
chr6 (65-175)||(9902688-9902798)
chr6 (20-161)||(31870144-31870285)
chr6 (48-175)||(11279100-11279227)
chr6 (48-175)||(15277310-15277437)
chr6 (48-175)||(32132410-32132537)
chr6 (52-208)||(11382040-11382194)
chr6 (53-161)||(34684027-34684136)
chr6 (37-161)||(166967-167091)
chr6 (56-174)||(3379690-3379808)
chr6 (20-162)||(18597201-18597343)
chr6 (56-161)||(8177925-8178030)
chr6 (48-208)||(15276934-15277094)
chr6 (32-208)||(32860007-32860183)
chr6 (48-159)||(11212229-11212340)
chr6 (48-171)||(16542309-16542432)
chr6 (72-161)||(4494159-4494248)
chr6 (38-117)||(29424655-29424734)
chr6 (51-117)||(8844422-8844488)
chr6 (46-136)||(9613944-9614034)
chr6 (20-146)||(27756249-27756375)
chr6 (19-157)||(27824698-27824836)
chr6 (20-174)||(35004159-35004313)
chr6 (39-175)||(3290635-3290769)
chr6 (21-174)||(5650735-5650888)
chr6 (48-161)||(14808045-14808157)
chr6 (52-108)||(32614035-32614091)
chr6 (54-136)||(15400654-15400736)
chr6 (54-136)||(15412441-15412523)
chr6 (54-136)||(15428035-15428117)
chr6 (48-88)||(10552749-10552789)
chr6 (22-88)||(13412644-13412710)
chr6 (27-88)||(29203043-29203104)
chr6 (48-116)||(6208981-6209049)
chr6 (80-136)||(8570257-8570313)
chr6 (52-135)||(28068787-28068868)
[»] scaffold0208 (1 HSPs)
scaffold0208 (37-208)||(2302-2473)
[»] chr3 (65 HSPs)
chr3 (41-208)||(3964255-3964421)
chr3 (20-174)||(31883008-31883162)
chr3 (21-162)||(3867647-3867788)
chr3 (48-185)||(53557770-53557907)
chr3 (48-208)||(28675763-28675923)
chr3 (48-208)||(39052790-39052950)
chr3 (20-208)||(51925160-51925348)
chr3 (37-175)||(20609633-20609771)
chr3 (48-161)||(1344706-1344819)
chr3 (48-208)||(2135043-2135203)
chr3 (58-174)||(8648543-8648659)
chr3 (48-208)||(34351320-34351480)
chr3 (53-161)||(42636402-42636510)
chr3 (48-208)||(44116912-44117072)
chr3 (48-208)||(51259732-51259892)
chr3 (32-175)||(33364763-33364906)
chr3 (48-175)||(47958417-47958544)
chr3 (53-175)||(38213332-38213454)
chr3 (38-160)||(44000224-44000346)
chr3 (48-174)||(49748897-49749023)
chr3 (48-198)||(54622758-54622908)
chr3 (37-174)||(34026629-34026766)
chr3 (48-160)||(5442264-5442376)
chr3 (48-208)||(12349123-12349283)
chr3 (20-175)||(40094447-40094603)
chr3 (32-136)||(41694925-41695029)
chr3 (48-175)||(20255018-20255144)
chr3 (48-175)||(21221345-21221472)
chr3 (48-175)||(26282372-26282499)
chr3 (48-175)||(29584848-29584975)
chr3 (48-161)||(4851455-4851568)
chr3 (53-174)||(25860407-25860528)
chr3 (56-161)||(29646047-29646152)
chr3 (48-208)||(3864627-3864786)
chr3 (48-208)||(24571254-24571414)
chr3 (55-175)||(25927312-25927432)
chr3 (32-174)||(25954408-25954549)
chr3 (73-174)||(14155447-14155547)
chr3 (92-208)||(19906779-19906895)
chr3 (38-208)||(51296544-51296714)
chr3 (48-161)||(50386455-50386568)
chr3 (20-162)||(28624918-28625059)
chr3 (48-130)||(32621842-32621924)
chr3 (92-161)||(21373947-21374016)
chr3 (27-111)||(389396-389479)
chr3 (48-136)||(3695316-3695404)
chr3 (32-123)||(10747174-10747266)
chr3 (92-175)||(50678815-50678898)
chr3 (51-133)||(44267718-44267800)
chr3 (24-162)||(49107135-49107273)
chr3 (38-111)||(25395577-25395650)
chr3 (38-162)||(8067055-8067179)
chr3 (20-108)||(16145873-16145961)
chr3 (32-208)||(22484695-22484871)
chr3 (65-128)||(19190653-19190716)
chr3 (92-175)||(24721502-24721585)
chr3 (54-109)||(32538586-32538641)
chr3 (38-120)||(47041559-47041644)
chr3 (54-132)||(51813371-51813449)
chr3 (48-137)||(45690924-45691012)
chr3 (48-109)||(53046692-53046753)
chr3 (37-97)||(30258835-30258895)
chr3 (48-136)||(27176417-27176504)
chr3 (72-136)||(36772017-36772081)
chr3 (82-130)||(39215499-39215547)
[»] scaffold0155 (1 HSPs)
scaffold0155 (38-162)||(33554-33678)
[»] scaffold0650 (1 HSPs)
scaffold0650 (20-174)||(1641-1795)
[»] scaffold0098 (1 HSPs)
scaffold0098 (37-174)||(51400-51536)
[»] scaffold0025 (1 HSPs)
scaffold0025 (32-161)||(5451-5580)
[»] scaffold0280 (1 HSPs)
scaffold0280 (32-208)||(13651-13827)
[»] scaffold0014 (1 HSPs)
scaffold0014 (48-174)||(101921-102047)
[»] scaffold0004 (1 HSPs)
scaffold0004 (48-174)||(372962-373088)
[»] scaffold0054 (2 HSPs)
scaffold0054 (23-174)||(19854-20005)
scaffold0054 (48-174)||(23549-23673)
[»] scaffold0360 (2 HSPs)
scaffold0360 (48-162)||(13589-13703)
scaffold0360 (37-174)||(15379-15512)
[»] scaffold0027 (1 HSPs)
scaffold0027 (48-174)||(15144-15270)
[»] scaffold0021 (2 HSPs)
scaffold0021 (38-174)||(108303-108436)
scaffold0021 (38-174)||(111073-111206)
[»] scaffold0957 (1 HSPs)
scaffold0957 (20-208)||(2460-2648)
[»] scaffold0062 (1 HSPs)
scaffold0062 (38-118)||(3682-3762)
[»] scaffold0729 (1 HSPs)
scaffold0729 (48-196)||(4555-4703)
[»] scaffold0077 (1 HSPs)
scaffold0077 (48-174)||(7456-7586)
[»] scaffold0050 (1 HSPs)
scaffold0050 (48-173)||(42949-43073)
[»] scaffold0236 (1 HSPs)
scaffold0236 (38-114)||(19784-19860)
[»] scaffold0006 (1 HSPs)
scaffold0006 (56-111)||(99841-99897)


Alignment Details
Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 208
Target Start/End: Original strand, 3735313 - 3735489
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||||| ||||| ||| |||||||||    
T  3735313 acaaatttttatgacattgaataattttttgttttatacgatttttggaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaag 3735412  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||| ||| ||| |||| ||||||||||   |||||||||||  |||||||| || | |||||||||| ||||||    
T  3735413 ttgtgctgtggtttggtgatggacaaaaatatcagtttttgtcctgtccattgcctccattttgtcatgtacctgaa 3735489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 40489309 - 40489436
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||| |||||||  ||||||||  ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| |    
T  40489309 ttgagtaattttttgttttatacaatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtgatttgg 40489408  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  40489409 tgagggacaaaaatatgagtttttgtcc 40489436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 39918479 - 39918606
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||| ||| ||||||||||||||| ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  39918479 ttgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgg 39918578  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  39918579 tgagggacaaaaatatgagtttttgtcc 39918606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 31644390 - 31644531
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  |||| |||||||||  |||||||||||| ||| ||||| ||||||| | ||||||||   |||||||||||||||||||| ||||| |    
T  31644390 gaacaacacaagacaaatttttatgacattgaataattttatgttttatatgatttttaggggacaaaatgctattttggtattttagacaacttgtacg 31644489  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    || ||||||||||||||| ||| ||| |||||||||||||||    
T  31644490 tgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 31644531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 41790615 - 41790459
Alignment:
Q  20 gaacaacacatcacaagt-ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| | |||||||   |||| ||||||| ||| ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||     
T  41790615 gaacaacacatgacaaatattttatggcattgagtaattttatgttttatacgatttttgggggacaaaatgttattttagtattttagacaatttgtac 41790516  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    ||| ||||||||||||||  ||| ||| |||||||||||||||   |||||||||||    
T  41790515 gtgagacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcc 41790459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 2351652 - 2351779
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| || |||||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  2351652 ttgagtaattttttgttttgtacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 2351751  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  2351752 tgagggacaaaaatatgagtttttgtcc 2351779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 32528687 - 32528814
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  32528687 ttgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 32528786  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  32528787 tgagggacaaaaatatgagtttttgtcc 32528814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 32093133 - 32092946
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||| |||| ||||| |||||||| | ||||| | |||| ||| |||||  |||||||| |||| |||   ||||||||||||||||| |||||||| |    
T  32093133 gaacagcacaacacaaatttttatggtattgaaaatttttatgttttatataatttttgggggacgaaatgctattttggtattttagataatttgtacg 32093034  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    || ||||||||||||||| ||| ||| |||| |||||||||||  ||||||||||| |||| |||| || |||||||| ||| ||||||    
T  32093033 tgggacaaaaagttgtgctgtggtttggtga-ggacaaaaatttcagtttttgtcctatcctttgcctccaatttgtcctgttcctgaa 32092946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 34794859 - 34795019
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| |||||||| |||||| | ||||||   |||||||||||||||||||| || || ||| ||||||||||||||  ||| ||| |    
T  34794859 ttgaataattttttgttttatacgaattttggggaacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttgtgatgtggtttgg 34794958  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| |||| |||||| ||| ||||||    
T  34794959 tgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaa 34795019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 21739280 - 21739125
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| |||||| |||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| ||||||    
T  21739280 taattttttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 21739181  T
Q  153 gacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  21739180 gacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 21739125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 39788153 - 39788292
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaaga-ttattttggtattttagacaatttgtatgtgtgacaaaaagttgt 135  Q
    |||||||| | |||| ||||||||||| ||||||||||||||| ||||||||   ||||||| ||||||||||||| ||||| ||| |||||||||||||    
T  39788153 tttttatggtattgagtaattttttgttttatacgatttttgggggacaaaaatgttattttagtattttagacaacttgtacgtgggacaaaaagttgt 39788252  T
Q  136 gcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |  ||| ||| |||||||||||||||   |||||||||||    
T  39788253 gatgtggtttggtgagggacaaaaatatgagtttttgtcc 39788292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 4818264 - 4818138
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||||||||||   ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  4818264 ttgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 4818165  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  4818164 tgagggacaaaaatatgagtttttgtc 4818138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 24036176 - 24036315
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| |||| |||||  ||  |||||||||||||||| ||||||||||||||| |  |||||  ||||||||||||||||||||| ||||| |    
T  24036176 gaacaacacatgacaaattttt--gacattgaataattttttgttttatacgatttttggggtgcaaaatgttattttggtattttagacaacttgtacg 24036273  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    || || |||||||||||  ||| ||| |||||||||||||||    
T  24036274 tgggataaaaagttgtgatgtggtttggtgagggacaaaaat 24036315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 31880211 - 31880073
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||||||||||||||| |||||||||| |||| ||||||||   |||||||||||||||||||| ||||| ||  |||||| |||||||    
T  31880211 tttttatgacattgaataattttttgtattatacgattgttgggggacaaaatgctattttggtattttagacaacttgtacgtaggacaaatagttgtg 31880112  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
      ||| ||| |||||||||||||||   |||||||||||    
T  31880111 atgtggtttggtgagggacaaaaatatgagtttttgtcc 31880073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 4689850 - 4689709
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| |||| |||||||||  |||||||||||||||| |||||||| |||||| |  | |||  ||||||| ||||||||| ||| ||||| |    
T  4689850 gaacaacacatgacaaatttttatgacattgaataattttttgttttatacgacttttggggctcgaaatgttatttttgtattttaggcaacttgtacg 4689751  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    || ||||||||||||||  ||| ||| |||||||||||||||    
T  4689750 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 4689709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 7208354 - 7208241
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  | ||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  7208354 ttgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgg 7208255  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  7208254 tgagggacaaaaat 7208241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 22493537 - 22493417
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||  ||||||||   ||||||| |||||||||||| ||||| ||||||||||||||||||| ||| ||| ||||||    
T  22493537 taattttttgttttatacgatttttgc-ggacaaaatgctattttgatattttagacaacttgtacgtgtgacaaaaagttgtgctgtggtttggtgagg 22493439  T
Q  153 gacaaaaattctagtttttgtc 174  Q
    |||||||||   ||||||||||    
T  22493438 gacaaaaatatgagtttttgtc 22493417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 56 - 208
Target Start/End: Original strand, 7523152 - 7523304
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |||||||||    
T  7523152 ttttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggac 7523251  T
Q  156 aaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  7523252 aaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 7523304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 553368 - 553495
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtgg-acaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgattta 146  Q
    |||||||||||| ||| ||||||||||||||| || ||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| |||     
T  553368 ttgaataattttatgttttatacgatttttggggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttg 553467  T
Q  147 gtgagggacaaaaattctagtttttgtc 174  Q
    ||||| |||||||||   ||||||||||    
T  553468 gtgagagacaaaaatatgagtttttgtc 553495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 18470568 - 18470426
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | ||||||||||| |||| ||||| | ||||||| |||| |||  |||||||||| |||||||||| ||||| ||| || ||||||    
T  18470568 acaaatttttatggtattgaataatttcttgttttatatgctttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgggataaaaag 18470469  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||| ||| ||| || |||||||||||||  ||||||||||    
T  18470468 ttgtgctgtggtttggtaagggacaaaaatttcagtttttgtc 18470426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 28090644 - 28090518
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||  ||||||| ||||||||||||| ||||| ||| ||||||||||||||  ||  ||| |    
T  28090644 ttgagtaattttttgttttatacgatttttgagggacaaaatgttatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtagtttgg 28090545  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  28090544 tgagggacaaaaatatgagtttttgtc 28090518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 7770419 - 7770290
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| |  | |||  ||||||| ||||||||| ||| ||||| ||| |||||||||    
T  7770419 acaaatttttatgacattgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgggacaaaaag 7770320  T
Q  132 ttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||| ||| ||| |||| ||||||||||    
T  7770319 ttgtgctgtggtttggtgaaggacaaaaat 7770290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 17031132 - 17031289
Alignment:
Q  51 aataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtga 150  Q
    |||||||||| |||||||| ||||||| ||||||||||   |||||| |||||||| | || ||||| ||| ||| ||||||||||| |||||||| |||    
T  17031132 aataatttttggtcttatatgattttttgtggacaaaaagctatttttgtattttaaataacttgtacgtgggacgaaaagttgtgctgtgatttaatga 17031231  T
Q  151 gggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||| ||||||||   ||||||||||  ||| |||| || |||||||  ||||||||||    
T  17031232 ggggcaaaaatttatgtttttgtcctgtcctttgcctccaatttgtactgtccctgaa 17031289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 41459561 - 41459674
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||  |||||||| |||||||||||| ||||| |||  ||||||||||||||  || ||| |    
T  41459561 ttgagtaattttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtggaacaaaaagttgtgctctggtttgg 41459660  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  41459661 tgagggacaaaaat 41459674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 29241350 - 29241510
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||| |||||||| ||| ||||| ||| ||||||||||||||| ||| ||| |    
T  29241350 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttgatattttagccaacttgtacgtgggacaaaaagttgtgctgtggtttgg 29241449  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     |||||||||||||   || ||||| ||  ||| |||| || |||||||||||| ||||||    
T  29241450 cgagggacaaaaatatgagcttttggcctgtcccttgcctccaatttgtcatgtacctgaa 29241510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 24181748 - 24181621
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| |||||| |||| ||||||||| ||||| ||||||||   |||||||||||||||||||| || || ||| ||||||||||| ||| ||| ||| |    
T  24181748 ttgagtaatttgttgttttatacgatctttgggggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttatgctgtggtttgg 24181649  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  24181648 tgagggacaaaaatatgagtttttgtcc 24181621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 8561133 - 8560980
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    |||||| |||| |||| ||||||||   |||| ||||||||||| ||||||||||||||| |||| |||  ||||||||||||||||||||| |||||      
T  8561133 gaacaaaacatgacaaatttttatggcattgattaattttttgttttatacgatttttgg-ggacgaaatgttattttggtattttagacaacttgtacc 8561035  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    ||  |||||||||||||  ||| ||| |||||| ||||||||   ||||||||||    
T  8561034 tggaacaaaaagttgtgatgtggtttggtgaggaacaaaaatatcagtttttgtc 8560980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 11963313 - 11963439
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||| | | ||||||||||||||  ||||||||   |||||||||||||||||||| ||| | ||| ||||||||||||||| ||| ||| |    
T  11963313 ttgagtaattttgtattttatacgatttttgagggacaaaatgctattttggtattttagacaacttgcacgtgggacaaaaagttgtgctgtggtttgg 11963412  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  11963413 tgagggacaaaaatatgagtttttgtc 11963439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 35701254 - 35701376
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| |||  |||||||||| ||  ||| ||| ||||||    
T  35701254 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttatgttgtggtttggtgagg 35701353  T
Q  153 gacaaaaattctagtttttgtcc 175  Q
    |||||||||   |||||||||||    
T  35701354 gacaaaaatatgagtttttgtcc 35701376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 174
Target Start/End: Complemental strand, 6311794 - 6311658
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | ||||| | | ||||||||||||   |||||||||||||| || ||||||||||| |||||||||||||||| || ||| ||||||||||    
T  6311794 tttttatggtattgaacattattttgtcttataaattttttggtggacaagaggttattttggtaatttagacaatttgtatttgggactaaaagttgtg 6311695  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
      ||| | | |||||| ||||||||| |||||||||||    
T  6311694 ttgtggtat-gtgaggaacaaaaattttagtttttgtc 6311658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 40182436 - 40182549
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||   |||||||   |||||||||||||||||||| |||||  || ||||||||||||||  ||| ||| |    
T  40182436 ttgagtaattttttgttttatacgatttttgagagacaaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgatgtggtttgg 40182535  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  40182536 tgagggacaaaaat 40182549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 700720 - 700612
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||| |||||| || |||||||| | ||||||||||||||||| || ||||| ||| ||||||||||||||  ||| ||| ||||||    
T  700720 taattttttgttttatatgattttcgggggacaaaataatattttggtattttagataacttgtacgtgagacaaaaagttgtgttgtggtttggtgagg 700621  T
Q  153 gacaaaaat 161  Q
     ||||||||    
T  700620 aacaaaaat 700612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 31770715 - 31770588
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||   ||||||||||||| |||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  31770715 ttgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtatttcagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 31770616  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||| ||||||   |||||||||||    
T  31770615 tgagggataaaaatatgagtttttgtcc 31770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 5571766 - 5571655
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||| ||||||     |||||||||||||||||||| ||||| ||  ||||||||||||||  ||| ||| |    
T  5571766 ttgagtaattttttgttttatacgatttttgggggacaatgc--tattttggtattttagacaacttgtacgttggacaaaaagttgtgttgtggtttgg 5571669  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  5571668 tgagggacaaaaat 5571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 23091428 - 23091302
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| |||| |||||| ||||||||||||||  ||||||||  |||||||| ||||||||||||||| || ||| ||||||||||||||  ||| |||      
T  23091428 ttgagtaatgttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaatttatacgtgagacaaaaagttgtgttgtggtttga 23091329  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||| ||||||||||   ||||||||||    
T  23091328 tgacggacaaaaatatgagtttttgtc 23091302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 6284423 - 6284310
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattatttt-ggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgattta 146  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||| |||||||| ||||| ||||| ||| ||||||||||||||  ||| |||     
T  6284423 ttgagtaattttttgttttatacgatttttgagggacaaaatgctatttttggtattttggacaacttgtacgtgggacaaaaagttgtgttgtggtttg 6284324  T
Q  147 gtgagggacaaaaa 160  Q
    ||||||||||||||    
T  6284323 gtgagggacaaaaa 6284310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 27839180 - 27839083
Alignment:
Q  65 ttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||| |||||  || |||||||||||||    || ||| ||||||||||||||||    
T  27839180 ttatacgatttttggaggacaaaaggctattttggtattttagacaacttgtacatgagacaaaaagttgttttatggtttggtgagggacaaaaatt 27839083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 5673121 - 5673224
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||| ||||||||  |||||||| ||||||||||     ||| ||| ||||||||||||||  ||| ||| ||||||    
T  5673121 taattttttgttttatacgatttttgggggacaaaatgttattttgatattttagac-----gtacgtgggacaaaaagttgtgttgtggtttggtgagg 5673215  T
Q  153 gacaaaaat 161  Q
    |||||||||    
T  5673216 gacaaaaat 5673224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 7725933 - 7725807
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||| |||| |||   ||||||||   ||||||||| || || ||| ||||||||||||||  ||| ||||     
T  7725933 ttgaataattttttgttttatacgatttttgggggacgaaatgctattttggatatttagacaacttatacgtgggacaaaaagttgtgttgtggtttaa 7725834  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||| ||||||||||   ||||||||||    
T  7725833 tgaaggacaaaaatatgagtttttgtc 7725807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 8136852 - 8136936
Alignment:
Q  91 ttattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||||||||| ||||| ||  ||||||||||||||  ||| ||| |||||||||||||||   |||||||||||    
T  8136852 ttattttggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcc 8136936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 22432425 - 22432306
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||| | ||||||||||||||| |||| |||   |||||||||||||||||||| |||||  || |||||||| |||||  ||| |||  ||||||||    
T  22432425 tttttttttttatacgatttttgggggacgaaatgctattttggtattttagacaacttgtacttgagacaaaaaattgtgttgtggtttgatgagggac 22432326  T
Q  156 aaaaattctagtttttgtcc 175  Q
    ||||||   |||||||||||    
T  22432325 aaaaatatcagtttttgtcc 22432306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 612520 - 612582
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    |||||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  612520 ttttttgtcttatacgatgtttggtgaacaaaatagtattttggtatgttagacaacttgtat 612582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 175
Target Start/End: Original strand, 35760622 - 35760761
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttg-gtattttagacaatttgtatgtgtgaca-aaaagttgt 135  Q
    ||||| |||||  |||||||||| |||||||||||||||| ||||| |||| | ||||||| ||||||||||  |||||||  ||| ||| ||||  |||    
T  35760622 ttttacgatgtcaaataatttttggtcttatacgatttttagtggataaaaaactattttgcgtattttagatgatttgtacctgtaacagaaaaactgt 35760721  T
Q  136 gcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |  |||||| || ||||||||||||||   ||||||||||    
T  35760722 gttgtgattcagcgagggacaaaaatttatgtttttgtcc 35760761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 8360395 - 8360476
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    |||||||||||||| |  ||||| ||||||| | || ||||||||||||| ||||||||||||| |||||| || ||||||||    
T  8360395 ttgaataattttttatagtatac-atttttgatagataaaagattattttagtattttagacaacttgtatttgagacaaaaa 8360476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 1338601 - 1338661
Alignment:
Q  57 tttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    |||||||  |||||||| |||| ||||||||| ||||||||| |||||||||||| |||||    
T  1338601 tttttgttatatacgatatttgatggacaaaaaattattttgatattttagacaacttgta 1338661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 32313782 - 32313854
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagatt 92  Q
    ||||||||||| |||| ||| |||  | |||| ||||||||  |||||||||||||||| |||||||||||||    
T  32313782 gaacaacacatgacaaatttgtatagtattgattaatttttgatcttatacgatttttgctggacaaaagatt 32313854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 5598495 - 5598541
Alignment:
Q  91 ttattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    |||||||| |||||||||||| ||||| ||| |||||||||||||||    
T  5598495 ttattttgatattttagacaagttgtacgtgagacaaaaagttgtgc 5598541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 35954974 - 35955044
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacga-tttttggtggacaaaagattattttggtatttta 106  Q
    |||||||| | |||||||||||||||||| |||||| |||||||| || ||||  ||||||| ||||||||    
T  35954974 tttttatggtattgaataattttttgtctaatacgattttttggtagagaaaaagttattttagtatttta 35955044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 11090946 - 11090861
Alignment:
Q  94 ttttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatc 179  Q
    ||||| ||||||||||||  |||| ||| ||||||||||||||  |||  |||||||||| ||| ||||  |||||| ||||||||    
T  11090946 ttttgatattttagacaacgtgtacgtgagacaaaaagttgtgtcgtggcttagtgagggtcaagaatttcagttttcgtccaatc 11090861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 24206332 - 24206412
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgattttt-ggtggacaaaagattattttggtattttagacaatttgta 117  Q
    ||||||| |||||||||||| || |||| |||||||||||  |||| || |||| |||||| |||||||||| || |||||    
T  24206332 ttttatgttgttgaataattgttggtctcatacgatttttaagtgggcataagactattttagtattttagataacttgta 24206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 40563873 - 40563829
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttt 76  Q
    |||| |||||||||| |||||||||||||  ||||||||||||||    
T  40563873 acaaatttttatgatattgaataatttttgatcttatacgatttt 40563829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 7761702 - 7761531
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  7761702 tttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtg 7761603  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    | ||| ||| |||||||||||||||   |||||||||||  ||| |||| |||| |||||||||| ||||||    
T  7761602 ctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcatgtacctgaa 7761531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 16104246 - 16104395
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||| |    
T  16104246 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtgctgtggtttgg 16104345  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtc 197  Q
    ||||||||||||||   |||||||||||  ||| |||| || ||||||||    
T  16104346 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtc 16104395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 41366253 - 41366068
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| | || |||||||||| ||||||||||||  ||||||||  |||||| ||||| | ||  ||||||||||||||||||||| |||||||    
T  41366253 gaacaacacatgataa-tttttatgatattgaataatttt--gtcttatataattttttgtggatacaatgttattttggtattttagacaacttgtatg 41366157  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    || |||||||| |||||  ||| ||| ||||||||||||||||  ||||||||||| |||  |||| || | |||||||||||||||||    
T  41366156 tgagacaaaaaattgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctatctcttgcctccagtttgtcatgtccctgaa 41366068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 174
Target Start/End: Original strand, 25383084 - 25383235
Alignment:
Q  29 atcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt-------g 121  Q
    |||||||||||||| | | ||||||||||| |||||||||||||||||| ||||||||||| |||| || ||||||||||||  ||||| ||            
T  25383084 atcacaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaagcttatatttgtattttagacatcttgtacgtagacaaat 25383183  T
Q  122 tgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25383184 agacaaaaagttgtgcagtgatttagtgagggacaaaaattct-gtttttgtc 25383235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 37003986 - 37003873
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||| | ||||||||||||||  ||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||  ||| ||| |    
T  37003986 ttgaataattttttattttatacgatttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggacaaaaagttgtgttgtggtttgg 37003887  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  37003886 tgagggacaaaaat 37003873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 5278952 - 5278792
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| |||||||| |||||| ||| ||| |    
T  5278952 ttgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgctgtggtttgg 5278853  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||||||| ||||||    
T  5278852 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaa 5278792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 33366582 - 33366742
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||| ||||||||| || |||||||||||  ||| ||| |    
T  33366582 ttgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggagaaaaagttgtgttgtggtttgg 33366681  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||| ||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  33366682 tgaggaacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 33366742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 2645204 - 2645077
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  | ||||||   |||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||| |    
T  2645204 ttgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtggtttgg 2645105  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  2645104 tgagggacaaaaatatgagtttttgtcc 2645077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 19513818 - 19513680
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | |||| ||||||||||| ||||| ||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  19513818 tttttatggtattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 19513719  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    | ||| ||| |||||||||||||||   |||||||||||    
T  19513718 ctgtggtttggtgagggacaaaaatatgagtttttgtcc 19513680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 185
Target Start/End: Original strand, 26796216 - 26796337
Alignment:
Q  63 tcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| |  ||| |||||||||||||| |||||    
T  26796216 tcttatatgatttttggtggacaaaagactattt-ggtattttagacaacttgtacgtgtgacaaaaagttgcgttgtgctttagtgagggacacaaatt 26796314  T
Q  163 ctagtttttgtccaatccattgc 185  Q
     || ||||| ||| |||||||||    
T  26796315 ttaatttttatcctatccattgc 26796337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 44284601 - 44284727
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||| |||||||||||| ||||| ||| ||||||||||||||| ||| |||||    
T  44284601 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttgttattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttag 44284700  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  44284701 tgagggacaaaaatatgagtttttgtc 44284727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 32766651 - 32766462
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  |||| ||||||||   |||||||||||||||| ||||||||||||||| |||| |||  |||||||||||||||||||||  |||| |    
T  32766651 gaacaacacaggacaaatttttatggcattgaataattttttgttttatacgatttttggaggacgaaatgttattttggtattttagacaacctgtacg 32766552  T
Q  120 tgtgac-aaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |  ||| |||||||||||  ||| ||| |||||||||||||||   |||||||||||  ||| |||| || | |||||||||| ||||||    
T  32766551 taggacaaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaa 32766462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 17540686 - 17540814
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattatttt-ggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgattta 146  Q
    |||| ||||||||||| ||||||||||||||  |||||||| | |||||| |||||||||||||| ||||| ||| ||||||||||||||| ||| |||     
T  17540686 ttgagtaattttttgttttatacgatttttgagggacaaaatactatttttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttg 17540785  T
Q  147 gtgagggacaaaaattctagtttttgtcc 175  Q
    |||||||||||||||   |||||||||||    
T  17540786 gtgagggacaaaaatatgagtttttgtcc 17540814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 32497887 - 32498047
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  32497887 ttgagtaattttttgttttatacgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttgg 32497986  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||| ||||||||   |||||||||||  ||| |||| |  | |||||||||| ||||||    
T  32497987 tgaggtacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaa 32498047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 208
Target Start/End: Original strand, 42706339 - 42706491
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||||||| ||||||||||||||  ||| ||| |||||||||    
T  42706339 ttttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggac 42706438  T
Q  156 aaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||   ||||||||||  |||| |||| || | |||||| ||| ||||||    
T  42706439 aaaaatatgagtttttgtcttatcccttgcctccagtttgtcctgtacctgaa 42706491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 9717201 - 9717308
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| | ||||||||||||  |||||||| | |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| ||||||    
T  9717201 taattttttgtttgatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 9717300  T
Q  153 gacaaaaa 160  Q
    ||||||||    
T  9717301 gacaaaaa 9717308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 208
Target Start/End: Original strand, 35114762 - 35114917
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| |||||||| |||||  ||| ||| ||||||    
T  35114762 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagg 35114861  T
Q  153 gacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||   |||||||||||  ||| |||| |||| |||||| ||| ||||||    
T  35114862 gacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaa 35114917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 9733048 - 9732922
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||   ||||||| |||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  9733048 ttgaataattttttgttttatacgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 9732949  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  9732948 tgagggacaaaaatatgagtttttgtc 9732922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 33889204 - 33889342
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | |||| ||||||||||| ||||| ||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  33889204 tttttatggtattgagtaattttttgttttatatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtg 33889303  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
      ||| ||| |||||||| ||||||   |||||||||||    
T  33889304 atgtggtttggtgagggaaaaaaatatgagtttttgtcc 33889342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 7258868 - 7259029
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaaga-ttattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgattta 146  Q
    |||| ||||||||||| |||||| |||||||  ||||||||   ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||| |||     
T  7258868 ttgagtaattttttgttttatacaatttttgagggacaaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttg 7258967  T
Q  147 gtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  7258968 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 7259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 26418900 - 26419021
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| |||||| |||||||| ||| ||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| ||||||    
T  26418900 taattttttgttttatacaatttttgggggataaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 26418999  T
Q  153 gacaaaaattctagtttttgtc 174  Q
     ||||||||   ||||||||||    
T  26419000 aacaaaaatatgagtttttgtc 26419021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 34338782 - 34338942
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||  ||| ||||||||||||||| ||| ||| |    
T  34338782 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtgcgtgggacaaaaagttgtgctgtggtttgg 34338881  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||| |||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  34338882 tgagggtcaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 34338942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 40832617 - 40832474
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataatt--ttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    ||||||||||| |||| |||||||  | |||||| |||  |||||| ||||||||||||||| |||| ||| | |||||||||||||||||| | |||||    
T  40832617 gaacaacacatgacaaatttttatattattgaattattatttttgttttatacgatttttgggggacgaaatactattttggtattttagactacttgta 40832518  T
Q  118 tgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
     ||| ||||||||||||||  ||| ||| |||||||||||||||    
T  40832517 cgtgagacaaaaagttgtgttgtggtttggtgagggacaaaaat 40832474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 6896113 - 6896300
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||| |||| |||||||| | ||||||||||| |||| ||||| |  |||||| |||| |||   ||||||||| |||||||||| ||||| ||    
T  6896113 aacaacacatgacaaatttttatggtattgaataatttcttgttttatatgccttttgggggacgaaatgctattttggtgttttagacaacttgtacgt 6896212  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    | ||||||||||||||| ||  ||| ||||||||||||||||  ||||||| |||  ||| |||| || | |||||  ||||||||||    
T  6896213 gggacaaaaagttgtgctgttgtttggtgagggacaaaaatttcagtttttatcctgtcccttgcctccagtttgttttgtccctgaa 6896300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 159
Target Start/End: Complemental strand, 30326449 - 30326338
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  |||||||| | |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  30326449 ttgagtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgg 30326350  T
Q  148 tgagggacaaaa 159  Q
     ||| |||||||    
T  30326349 cgagagacaaaa 30326338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 41934553 - 41934679
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||| ||||| ||||||||| ||||||||||||||||||  ||||||||||||||||||||| || || ||  ||||||||||||||  ||| |||||    
T  41934553 ttgaatgattttatgtcttatatgatttttggtggacaaaatgttattttggtattttagacaacttatacgtaggacaaaaagttgtgttgtggtttag 41934652  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||| | |||| ||||  ||||||||||    
T  41934653 tgaagtacaagaatttcagtttttgtc 41934679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 4641488 - 4641601
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  | ||||||   ||||||||||||||| |||| ||||||||| ||||||||||||||| ||| ||| |    
T  4641488 ttgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttaaacaacttgtatgtgagacaaaaagttgtgctgtggtttgg 4641587  T
Q  148 tgagggacaaaaat 161  Q
    |||| |||||||||    
T  4641588 tgagagacaaaaat 4641601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 37308599 - 37308787
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| |||   |||| ||||||||| | || ||||||||||   |||||||| | ||||||||||||||||||||||||||     
T  37308599 gaacaacacatgacaaattttttatggcattgagtaatttttt-tgttttacgattttttagggacaaaatactattttggtattttagacaatttgtac 37308697  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||| ||||||||||||||  ||| ||| |||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  37308698 gtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 37308787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 13829394 - 13829537
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||| |||||||||||||||| ||||| ||||||||  |||| |||   ||||||||| ||||||| || |||||  || |||||||||    
T  13829394 acaaatttttatgatattgaataattttttgttttatatgatttttgagggacgaaatgatattttggtgttttagataacttgtacctgggacaaaaag 13829493  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |||||  ||| | |||||| |||||||||||  |||||||||||    
T  13829494 ttgtgatgtggtctagtgatggacaaaaatttcagtttttgtcc 13829537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 18278874 - 18278999
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||||| ||||||||| ||  ||||||||| |||||||||||||| ||        || ||||||| |||||||||||||| ||||||||||||||     
T  18278874 ttttatgatattgaataatatt--gtcttatacaatttttggtggacataa--------tgctattttatacaatttgtatgtgagacaaaaagttgtga 18278963  T
Q  138 agtgatttagtgagggacaaaaattctagtttttgt 173  Q
     |||||||||||||| ||||||||| ||||||||||    
T  18278964 cgtgatttagtgaggaacaaaaattttagtttttgt 18278999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 12939410 - 12939292
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||| ||||||||| ||||||||  |||||||||||| |||||||| ||||| ||| || |||||||||||| ||| ||| |||| ||||    
T  12939410 ttttttgttttatatgatttttgggggacaaaatgttattttggtatcttagacaacttgtacgtgagataaaaagttgtgctgtggtttggtgaaggac 12939311  T
Q  156 aaaaattctagtttttgtc 174  Q
    ||||||   ||||||||||    
T  12939310 aaaaatatcagtttttgtc 12939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 18685808 - 18685934
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||  |||||||  |||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  18685808 ttgagtaattttttgttttataggatttttgagggacaaaatgttattttaatattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 18685907  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    |||| |||||||||   ||||||||||    
T  18685908 tgagagacaaaaatatgagtttttgtc 18685934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 12672592 - 12672479
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||| ||||||||   |||||||||||||||||||| |||||  || || ||||| |||||  ||| ||| |    
T  12672592 ttgagtaattttttgttttatacgatttttggaggacaaaatgctattttggtattttagacaacttgtacttgggataaaaacttgtgttgtggtttgg 12672493  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  12672492 tgagggacaaaaat 12672479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 45463255 - 45463115
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| |||| |||||||    || ||||||||||||| ||||||||||| ||| |||| |||  |||||||| ||||||||||||| |||| |    
T  45463255 gaacaacacatgacaaatttttattgcattaaataattttttgttttatacgatttctgg-ggacgaaatgttattttgatattttagacaatctgtacg 45463157  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    | |||||||||||||||  ||| ||| ||||| |||||||||    
T  45463156 tatgacaaaaagttgtgttgtggtttggtgagtgacaaaaat 45463115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 10399988 - 10399828
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| |||||||| |||||| ||||||||   ||||||||  |||||||||| || ||  || ||||||||||||||  ||| |||||    
T  10399988 ttgaataattttttgttttatacgacttttgggggacaaaatgctattttggatttttagacaacttatacatgagacaaaaagttgtgttgtggtttag 10399889  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||| ||||||||||   |||||||||||  |   ||||||||| |||||| ||| ||||||    
T  10399888 tgaaggacaaaaatatgagtttttgtcctgtatcttgcatctagtttgtcctgtacctgaa 10399828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 30798602 - 30798494
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||  ||||||||   ||||||||||||||||| || ||||| ||| || |||||||||||  ||| ||| ||||||    
T  30798602 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgatgtggtttggtgagg 30798503  T
Q  153 gacaaaaat 161  Q
    |||||||||    
T  30798502 gacaaaaat 30798494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 3913578 - 3913451
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||| |||||| ||||||||||||||| |  |||||   |||||||||||||||||||| ||||| |||  |||||||||||||  ||| ||| |    
T  3913578 ttgaataatattttgttttatacgatttttggggagcaaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtgttgtggtttgg 3913479  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||| ||   |||||||||||    
T  3913478 tgagggacaaacatgtgagtttttgtcc 3913451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 38623365 - 38623262
Alignment:
Q  105 tagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccc 204  Q
    ||||||| ||||||||| ||||||||||||||| ||| ||| ||||||||||||||||  ||||||||||   |||||||| || | |||||| ||||||    
T  38623365 tagacaacttgtatgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcttttccattgcctcaagtttgtcctgtccc 38623266  T
Q  205 tgaa 208  Q
    ||||    
T  38623265 tgaa 38623262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 2086015 - 2086157
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| |||   |||| ||||||||||| ||||||||||||||  ||||||||  |||||||||||||| |||||| |||||     
T  2086015 gaacaacacatgacaaattttttatgccattgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtatttcagacaacttgtac 2086114  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||  |||||||||||| | ||| ||| |  ||||||||||||    
T  2086115 gtgaaacaaaaagttgtactgtggtttgggtagggacaaaaat 2086157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 40692277 - 40692396
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||        || |||||||||||| ||||| ||| ||||||||||||| | ||| ||| |    
T  40692277 ttgaataattttttgttttatacgatttttgagggacaaaa--------tgctattttagacaacttgtacgtgggacaaaaagttgttctgtggtttgg 40692368  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    |||||||||||||| | |||||||||||    
T  40692369 tgagggacaaaaatacgagtttttgtcc 40692396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 27462946 - 27462807
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| |||| ||| |||||  |||||||||||||||| || |||||||||| | | || |||   |||||||||||||| |||||| ||||||    
T  27462946 gaacaacacatgacaaatttatatgacattgaataattttttgt-ttttacgatttttagggcacgaaatgctattttggtatttttgacaatatgtatg 27462848  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
     |||| |||||||||||  ||| ||| |||||||||||||||    
T  27462847 -gtgataaaaagttgtgttgtggtttggtgagggacaaaaat 27462807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 18793379 - 18793297
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    |||| ||||||||||| |||||| |||||||| ||||||||  ||||||||||||||||||||| ||||| ||| ||| ||||    
T  18793379 ttgagtaattttttgttttatacaatttttggaggacaaaatgttattttggtattttagacaacttgtacgtgagactaaaa 18793297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 175
Target Start/End: Original strand, 1230873 - 1231010
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    |||||| || ||||||||||||| ||| ||||| ||| |||||||||||||   |||||| |||||||||  ||||||||  || |||||||||||| |     
T  1230873 ttttattatattgaataatttttggtcatatactattgttggtggacaaaaagatatttttgtattttaggtaatttgtacatgagacaaaaagttgaga 1230972  T
Q  138 agtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
     ||| ||||||||  ||||||||   ||||||||||||    
T  1230973 tgtggtttagtgaaagacaaaaagaatagtttttgtcc 1231010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 1247171 - 1247232
Alignment:
Q  100 tattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||||||||| ||||| ||| ||||||||||||||||||| ||| |||||||||||||||    
T  1247171 tattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttggtgagggacaaaaat 1247232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 11114844 - 11114957
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||||||| || |||||||||| || | |||| ||| | |||||||| ||||||||||| ||||  ||| ||||||||||||||  ||| ||| |    
T  11114844 ttgaataatttttcgttttatacgattgttagcggacgaaatactattttggaattttagacaacttgtgcgtgggacaaaaagttgtgatgtggtttgg 11114943  T
Q  148 tgagggacaaaaat 161  Q
    ||||| ||||||||    
T  11114944 tgaggaacaaaaat 11114957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 20907533 - 20907630
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    |||||||| || |||| ||||||||   |||||||||||||||| || |||||||||||| ||| ||||  ||||||| |||||||| ||||||||||    
T  20907533 gaacaacatatgacaaatttttatgtcattgaataattttttgttttgtacgatttttgggggataaaatgttattttagtattttatacaatttgta 20907630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 152
Target Start/End: Complemental strand, 35473146 - 35473014
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    |||||||| || |||| |||| ||| | || |||||||||| ||||||||| | ||||  ||||||||||  |||| ||||||||||||||| ||||| |    
T  35473146 gaacaacatatgacaaattttgatggtattaaataatttttggtcttatacaaatttttatggacaaaaggatattatggtattttagacaacttgtacg 35473047  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    || |||||||| |||   |||| ||||||||||    
T  35473046 tgggacaaaaaattgcagagtggtttagtgagg 35473014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 42365549 - 42365709
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||| | ||||||||  ||||||||||||||||||||| ||||  |||  | |||||||||||  ||| |||      
T  42365549 ttgagtaattttttgttttatatgatttttaggggacaaaatgttattttggtattttagacaacttgtccgtgatataaaaagttgtgttgtggtttga 42365648  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||| ||||||||||   ||||||||||   ||| |||| || | |||||||||| ||||||    
T  42365649 tgaaggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcatgtacctgaa 42365709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 16177991 - 16177888
Alignment:
Q  58 ttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaa 157  Q
    |||||| ||||||||||||||| |||| |||    ||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| || || |||||    
T  16177991 ttttgttttatacgatttttgggggacgaaattccattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagcgacaa 16177892  T
Q  158 aaat 161  Q
    ||||    
T  16177891 aaat 16177888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 28824703 - 28824548
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    |||||| |||| |||| |||||||||  | |||||| ||||||| |||||| |||||||| |  | |||   |||||| ||||||||||||| ||| | |    
T  28824703 gaacaatacatgacaaatttttatgacatggaataaatttttgttttatacaatttttggggtgcgaaatgctattttagtattttagacaacttgcacg 28824604  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    || || |||||||||||  ||| ||| |||||||||||||||   |||||||||||    
T  28824603 tgagataaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcc 28824548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 38993189 - 38993062
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||| ||| |||||  ||||||||  ||| |||   |||||| ||||||||||||| ||||| ||| ||||||||||||||  ||| |||      
T  38993189 ttgaataattttctgtattatattatttttgggtgacgaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttga 38993090  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
     |||| ||||||||| ||||||||||||    
T  38993089 cgaggaacaaaaattgtagtttttgtcc 38993062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 39461286 - 39461401
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttg---tgcagtgatt 144  Q
    |||| ||||||||| | ||||||||||||||  ||||||||   |||||||||||||||||||  ||||| ||| || |||||||||   ||  ||||||    
T  39461286 ttgagtaattttttattttatacgatttttgagggacaaaatgctattttggtattttagacagcttgtacgtgagataaaaagttgtgttgttgtgatt 39461385  T
Q  145 tagtgagggacaaaaa 160  Q
    | ||||||||||||||    
T  39461386 tggtgagggacaaaaa 39461401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 7294506 - 7294427
Alignment:
Q  51 aataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    ||||| ||||||||||||| || |||||||| | |||||| ||||||||||||||  |||| ||||| ||| ||||||||    
T  7294506 aataactttttgtcttatatgagttttggtgaataaaagactattttggtattttttacaacttgtacgtgagacaaaaa 7294427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 30712813 - 30712959
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | |||||||||||||||| ||||| ||||||||| |||  |||   ||||||||| |||||||||| || || ||| || ||||||    
T  30712813 acaaatttttatggtattgaataattttttgttttatatgatttttgg-ggatgaaatgatattttggtgttttagacaacttctacgtgggataaaaag 30712911  T
Q  132 ttgtgcagtg----atttagtgagggacaaaaattctagtttttgtcc 175  Q
    |||||  |||    |||| ||||||||||||||||  ||||| |||||    
T  30712912 ttgtgttgtggttaatttggtgagggacaaaaatttcagtttgtgtcc 30712959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 31148784 - 31148847
Alignment:
Q  51 aataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaattt 114  Q
    ||||||||||||| |||||| |||| || |||| |||| | ||||||| |||||||||||||||    
T  31148784 aataattttttgttttatacaatttgtgttggataaaaaactattttgatattttagacaattt 31148847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 16062186 - 16062130
Alignment:
Q  73 tttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    ||||||||||||||||  ||||||||  ||||||||||| ||||||||| ||||||||    
T  16062186 tttttggtggacaaaatgttattttgtcattttagacaa-ttgtatgtgggacaaaaa 16062130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 26981781 - 26981701
Alignment:
Q  94 ttttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||||||||||||||| ||||| ||   |||||||||| ||  ||| ||| |||||||||||||||   ||||||||||    
T  26981781 ttttggtattttagacaacttgtacgtagaacaaaaagttttgttgtggtttggtgagggacaaaaatatgagtttttgtc 26981701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 3649584 - 3649738
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||| |||||||||| |||||||| | ||||||||||| |||| ||||| | ||||||| |||| |||  |||||||||| |||||||||| ||||| ||    
T  3649584 aacagcacatcacaaatttttatggtattgaataatttcttgttttatatgttttttgggggacgaaatgttattttggtgttttagacaacttgtacgt 3649683  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    | ||||||||||||||| ||| ||| |||||||||||||||| ||||||||||||    
T  3649684 gggacaaaaagttgtgctgtggtttggtgagggacaaaaattttagtttttgtcc 3649738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 842193 - 842279
Alignment:
Q  165 agtttttgtccaatccattgcatctaatttgtcatgtccctgaagttataaatcaaacaccctacatttaatagagatgcattttat 251  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  842193 agtttttgcccaatccattgcatctagtttgtcatgtccctgaagttataaatcaaacaccctaaatttaacagagatgcattttat 842279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 33552953 - 33552793
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  33552953 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 33552854  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   ||||||||||   ||| ||||||| |||||||| ||| ||||||    
T  33552853 tgagggacaaaaatatgagtttttgtcttgtcccttgcatccaatttgtcctgtacctgaa 33552793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 23521855 - 23522015
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  23521855 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 23521954  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   ||||||||||| |||| |||| || | |||||| ||| ||||||    
T  23521955 tgagggacaaaaatatgagtttttgtcctatcccttgcttccagtttgtcctgtacctgaa 23522015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 44324481 - 44324293
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||| ||||| |||| ||||||||   |||||||||||||||| ||||||||||||||| |||| |||   ||||||||||||| | |||| ||||| |    
T  44324481 gaacagcacatgacaaatttttatggcattgaataattttttgttttatacgatttttgggggacgaaatgctattttggtatttaaaacaacttgtacg 44324382  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    || ||||||||||||||| ||| ||| |||||||||||||||   |||||||||||  ||  |||| |||| |||||| ||| ||||||    
T  44324381 tgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtcccgtcttttgcctctagtttgtcctgtacctgaa 44324293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 50728024 - 50727864
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| |||      
T  50728024 ttgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttga 50727925  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| |  | |||||||||| ||||||    
T  50727924 tgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaa 50727864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 50736038 - 50735878
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| |||      
T  50736038 ttgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttga 50735939  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| |  | |||||||||| ||||||    
T  50735938 tgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaa 50735878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 21579990 - 21580161
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | |||| |||||||| || ||||||||||||||  |||||| |   |||||||||||||||||||||||||| ||| ||||||||||||||    
T  21579990 tttttatggtattgagtaatttttagttttatacgatttttgagggacaacatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtg 21580089  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
      ||| ||| |||||||||||||||   |||||||||||  ||| |||| || |||||||| ||| ||||||    
T  21580090 atgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaa 21580161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 43641074 - 43641201
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  43641074 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 43641173  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  43641174 tgagggacaaaaatatgagtttttgtcc 43641201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 22318522 - 22318381
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||| |||| |||||||||| ||||||||||| |||| ||||| |||||||||  |||||||  |||||||||| |||||||||| || || ||    
T  22318522 aacaacacatgacaaatttttatgatattgaataatttcttgttttatatgatttttggatgacaaaatgttattttggtgttttagacaacttctacgt 22318423  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
      ||||||||||||||  ||| ||| ||||||||||||||||    
T  22318422 aagacaaaaagttgtgttgtggtttggtgagggacaaaaatt 22318381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 32181238 - 32181387
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||| ||| |||||| |||||||| |||| |||   |||||||||||||||||||| ||||| ||| ||||||||||||| | ||| ||| |    
T  32181238 ttgaataattttatgttttatactatttttgggggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttgg 32181337  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtc 197  Q
    ||||||||||||||   |||||||||||  ||| ||||||||| ||||||    
T  32181338 tgagggacaaaaatatgagtttttgtcctgtcccttgcatctagtttgtc 32181387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 9807131 - 9807290
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||| ||| ||||||||||||||| |||| |||   |||||||||||||||||||| ||||| ||  ||||||||||||| | ||| ||| |    
T  9807131 ttgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacgtaggacaaaaagttgtactgtggtttgg 9807230  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||| ||||||||| |  |||||||||||  ||||||||||||| |||||| ||| ||||||    
T  9807231 tga-ggacaaaaagttgagtttttgtcctgtccattgcatctagtttgtcttgtacctgaa 9807290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 33177143 - 33176983
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||| ||| ||||||||||||||| ||||||||  ||||||||||||||||||||| ||||  ||| ||||||||||||||  ||| ||| |    
T  33177143 ttgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtgcgtgggacaaaaagttgtgttgtggtttgg 33177044  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  33177043 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 33176983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 47642613 - 47642489
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| ||| ||||||||||||||    
T  47642613 tttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 47642514  T
Q  137 cagtgatttagtgagggacaaaaat 161  Q
      ||| |||  ||||||||||||||    
T  47642513 ttgtggtttgctgagggacaaaaat 47642489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 55593860 - 55594020
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| || |||||||||||| ||| ||| |    
T  55593860 ttgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggataaaaagttgtgctgtggtttgg 55593959  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||| |||||   |||||||||||  ||| |||| || | ||| |||||| ||||||    
T  55593960 tgagggactaaaatatgagtttttgtcctgtcccttgcctccagtttatcatgtacctgaa 55594020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 1231291 - 1231414
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    |||| |||||| ||||||||||||||  ||||||||  |||||||| |||||||||||| ||||| ||| ||||||||||||||| ||| ||| ||||||    
T  1231291 taatattttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgtgctgtggttttgtgagg 1231390  T
Q  153 gacaaaaattctagtttttgtcca 176  Q
    |||||||||   ||||||||||||    
T  1231391 gacaaaaatatgagtttttgtcca 1231414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 24002313 - 24002474
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagat--tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgattt 145  Q
    |||| ||||||||||| ||||||||||||||  |||||||| ||  |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| |||    
T  24002313 ttgagtaattttttgttttatacgatttttgagggacaaaa-atgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggttt 24002411  T
Q  146 agtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     |||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  24002412 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 24002474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 208
Target Start/End: Original strand, 36885912 - 36886067
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||  ||||||||   ||||| |||||||||||||||||||| ||| || |||||||||||| ||| ||| ||||||    
T  36885912 taattttttgttttatacgatttttgagggacaaaatgctatttaggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttggtgagg 36886011  T
Q  153 gacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  36886012 gacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaa 36886067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 37865699 - 37865854
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| |||   |||||||||||||||| ||||||||||| ||  ||||||||   |||||||||||||||||||| |||||     
T  37865699 gaacaacacatgacaatttttttatggcattgaataattttttgttttatacgatttctgagggacaaaatgctattttggtattttagacaacttgtac 37865798  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
     || ||||||||||||||  ||||||| |||||||||||||||   ||||||||||    
T  37865799 atgggacaaaaagttgtgttgtgatttggtgagggacaaaaatatgagtttttgtc 37865854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 2725254 - 2725117
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  2725254 tttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtg-gacaaaaagttgtg 2725156  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
      ||| ||| |||||||||||||||   |||||||||||    
T  2725155 atgtggtttggtgagggacaaaaatatgagtttttgtcc 2725117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 41711805 - 41711935
Alignment:
Q  31 cacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    ||||| |||||||| | |||||||||||||||| ||||||||| ||||| |||| |||   ||||||||||||||||||||  |||| ||| ||||||||    
T  41711805 cacaaatttttatgctattgaataattttttgttttatacgatatttgggggacgaaatgctattttggtattttagacaacctgtacgtgagacaaaaa 41711904  T
Q  131 gttgtgcagtgatttagtgagggacaaaaat 161  Q
    ||||| | ||| ||| |||||||||||||||    
T  41711905 gttgtactgtggtttggtgagggacaaaaat 41711935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 29785648 - 29785535
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||| ||||  ||| ||| |    
T  29785648 ttgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagctgtgttgtggtttgg 29785549  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  29785548 tgagggacaaaaat 29785535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 41720790 - 41720903
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| ||||  ||| ||||| ||| ||||||||| ||||||||| |||||| |||||||||| |||||||| |||||||||| |||||||| |    
T  41720790 gaacaacacatgacaaactttaatgatattgtataatttttagtcttatactattttttgtggacaaaaaattatttttgtattttagataatttgtacg 41720889  T
Q  120 tgtgacaaaaagtt 133  Q
    || |||||||||||    
T  41720890 tgggacaaaaagtt 41720903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 56154596 - 56154709
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  56154596 ttgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 56154695  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  56154696 tgagggacaaaaat 56154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 24210264 - 24210454
Alignment:
Q  20 gaacaacacatcacaagt-ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagat--tattttggtattttagacaatttgt 116  Q
    ||||||||||| |||| | ||||||| | |||| ||||||||||| ||||||||||||||  |||||||| ||  |||||||||||||||||||| ||||    
T  24210264 gaacaacacatgacaaatattttatggtattgagtaattttttgttttatacgatttttgagggacaaaa-atgctattttggtattttagacaacttgt 24210362  T
Q  117 atgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    | ||| || |||||||||||| ||| ||| ||||||||||| |||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  24210363 acgtgggataaaaagttgtgctgtggtttggtgagggacaataatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 24210454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 49152210 - 49152051
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||||||||||| |||||||||  |||||||||| |||||||||| ||||| ||| || |||||||||||  ||| ||| |    
T  49152210 ttgagtaattttttgttttatacgatttttgatggacaaaatgttattttggt-ttttagacaacttgtacgtgggataaaaagttgtgttgtggtttgg 49152112  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   ||||||||||   ||| ||||||| | |||||| ||| ||||||    
T  49152111 tgagggacaaaaatatgagtttttgtcgtgtcccttgcatccagtttgtcttgtacctgaa 49152051  T

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Target: chr4; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 50178620 - 50178476
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgac-aaaaa 130  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| ||| ||| |||||    
T  50178620 acaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaaa 50178521  T
Q  131 gttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    ||||||| ||| |||  ||||| ||||||||   |||||||||||    
T  50178520 gttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtcc 50178476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 9512451 - 9512324
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  9512451 ttgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 9512352  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||| ||||||||||   |||||||||||    
T  9512351 tgaaggacaaaaatatgagtttttgtcc 9512324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 20802642 - 20802515
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  20802642 ttgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttgg 20802543  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  20802542 tgagggacaaaaatatgagtttttgtcc 20802515  T

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Target: chr4; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 208
Target Start/End: Original strand, 38812500 - 38812655
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||  | ||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| ||||||    
T  38812500 taattttttgttttatacgatttttgcggaacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagg 38812599  T
Q  153 gacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  38812600 gacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 38812655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 52949680 - 52949822
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  ||||||||||||| || ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| ||| |||||||||    
T  52949680 acaaatttttatgacattgaataattttt-gttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaag 52949778  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |||||  ||| |||  ||||||||||||||   |||||||||||    
T  52949779 ttgtgttgtggtttgctgagggacaaaaatatcagtttttgtcc 52949822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 55065444 - 55065317
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||| |||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  55065444 ttgagtaattttttgttttatacgatttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 55065345  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  55065344 tgagggacaaaaatatgagtttttgtcc 55065317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 29616116 - 29616234
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| |||   |||| ||||||||||| |||||||||||||   ||||||||  |||||||||||||||||||||||||||     
T  29616116 gaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttaagggacaaaatgttattttggtattttagacaatttgtac 29616215  T
Q  119 gtgtgacaaaaagttgtgc 137  Q
    ||| |||||||||||||||    
T  29616216 gtgggacaaaaagttgtgc 29616234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 37695652 - 37695526
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||| |||| |||  |||||||| ||||||||||||  |||| ||| ||||||||||||||  ||| |||      
T  37695652 ttgaataattttttgttttatacgatttttgggggacgaaatgttattttgatattttagacaacctgtacgtgggacaaaaagttgtgttgtggtttga 37695553  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  37695552 tgagggacaaaaatatcagtttttgtc 37695526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 43739408 - 43739562
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| | || ||||| || | || |||||||||| ||||||||| |||||| ||||| ||||  |||||||  |||||||||||| |||||||    
T  43739408 gaacaacacatgataaatttttttggtattaaataatttttggtcttatacaattttttgtggataaaatgttattttaatattttagacaacttgtatg 43739507  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    || ||||||| ||||||  ||| ||| ||||||||||| ||||  ||||||||||    
T  43739508 tgggacaaaatgttgtgttgtggtttggtgagggacaataatttcagtttttgtc 43739562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 53200782 - 53200628
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||  |||| |||||||| | |||||||||||||||| || || ||||||||  |||| ||| | ||||||| | |||||||||| ||||| ||    
T  53200782 aacaacacagaacaaatttttatggtattgaataattttttgttttgtatgatttttgagggacgaaatactattttgatgttttagacaacttgtacgt 53200683  T
Q  121 gtgac-aaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    | ||| |||||||||||| ||| ||| ||||||||||||||||  ||||||||||    
T  53200682 gggacaaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtc 53200628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 174
Target Start/End: Complemental strand, 38486379 - 38486242
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||  ||||| ||||||||||| |||||| |||||||  ||||||||   ||||||| |||||||||||| ||||| ||  ||||||||||||||    
T  38486379 tttttatggcgttgagtaattttttgttttatactatttttgagggacaaaatgctattttgatattttagacaacttgtacgttagacaaaaagttgtg 38486280  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    | ||| ||| |||||||||||||||   ||||||||||    
T  38486279 ctgtggtttggtgagggacaaaaatatgagtttttgtc 38486242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 54542965 - 54543113
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||| |||||||||||  || ||| |    
T  54542965 ttgagtaattttttgttttatacgatttttgagggacaaaatgatattttggtattttagacaacttgtacgtgggac-aaaagttgtgctatggtttgg 54543063  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtc 197  Q
    ||||||||||||||   |||||||||||  ||| |||| || ||||||||    
T  54543064 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtc 54543113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 2786939 - 2787079
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||| ||||||||| |||| |||  |||||||||  ||||||| |||||||| ||| |||||||| |||||  ||| |||||    
T  2786939 ttgaataattttttgttttataagatttttgggggacgaaatgttattttggatttttagataatttgtacgtgggacaaaaatttgtgatgtggtttag 2787038  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatc 188  Q
    ||| ||||||||||   |||||||||||  ||| |||||||    
T  2787039 tgaaggacaaaaatatgagtttttgtcctgtcccttgcatc 2787079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 44649301 - 44649148
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| |||| |||| ||||  ||||||||||||  || ||||||||||||||| ||||||||   ||||||| |||||||||||| |||||      
T  44649301 gaacaacacatgacaaattttgatgacattgaataatttt--gttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtaca 44649204  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    || ||||||||||||||  ||| |||  ||||||||||||||   |||||||||||    
T  44649203 tgggacaaaaagttgtgttgtggtttgctgagggacaaaaatatcagtttttgtcc 44649148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 46680621 - 46680461
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| |||||||   ||||||||   |||| ||||||||||||||||||||| ||| ||||||||||||||| ||| ||| |    
T  46680621 ttgagtaattttttgttttatatgattttttagggacaaaatgctattatggtattttagacaatttgtacgtgagacaaaaagttgtgctgtggtttgg 46680522  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    | ||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  46680521 taagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 46680461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 208
Target Start/End: Original strand, 4325771 - 4325926
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| |||| |||||||||| ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  | | ||| |||||     
T  4325771 taattttttgttttatgcgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgcggttttgtgaga 4325870  T
Q  153 gacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||   ||||||| |||  ||| |||| || | |||||||||| ||||||    
T  4325871 gacaaaaatatgagtttttctcctgtcccttgcctccagtttgtcatgtacctgaa 4325926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 842142 - 842192
Alignment:
Q  14 agagcggaacaacacatcacaagtttttatgatgttgaataattttttgtc 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  842142 agagcggaacaacacatcacaagtttttatgatgttgaataattttttgtc 842192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 21202720 - 21202841
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| ||| ||||||||||||||  ||| ||| ||||||    
T  21202720 taattttttgttttatacgatttttgg-ggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagg 21202818  T
Q  153 gacaaaaattctagtttttgtcc 175  Q
    ||||||| |   |||||||||||    
T  21202819 gacaaaattatgagtttttgtcc 21202841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 34929899 - 34930017
Alignment:
Q  57 tttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggaca 156  Q
    ||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| |||||| || | ||||||||||||| ||| ||| |||||| |||    
T  34929899 tttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtatatggggcaaaaagttgtgctgtggtttggtgaggaaca 34929998  T
Q  157 aaaattctagtttttgtcc 175  Q
    |||||   |||||||||||    
T  34929999 aaaatatgagtttttgtcc 34930017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 161
Target Start/End: Original strand, 52319309 - 52319411
Alignment:
Q  59 tttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaa 158  Q
    ||||| ||||||||||||||  ||||||||  ||||||||  ||||||||||| ||||| ||| ||||||||||||||| ||| ||| ||||||||||||    
T  52319309 tttgttttatacgatttttgagggacaaaatgttattttgacattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaa 52319408  T
Q  159 aat 161  Q
    |||    
T  52319409 aat 52319411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 7001829 - 7001952
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||| || ||  |   |||||||||||||  ||| ||| |    
T  7001829 ttgaataatttttggtcttatacgatttttggtggacaaatg-ttattttggta-tttagacaacttatacatagaacaaaaagttgtgttgtggtttgg 7001926  T
Q  148 tgagggacaaaaattctagtttttgt 173  Q
    ||||||||||||||| | ||||||||    
T  7001927 tgagggacaaaaatttttgtttttgt 7001952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 20518133 - 20518020
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||  |||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||| ||||| ||| ||||||| |    
T  20518133 ttgagtaattttttgttttatagaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaagaagttatgctgtgatttgg 20518034  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  20518033 tgagggacaaaaat 20518020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 36743799 - 36743686
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| |||||| |||| |||||| |||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||  ||| |    
T  36743799 ttgagtaatttgttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttgg 36743700  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  36743699 tgagggacaaaaat 36743686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 50186487 - 50186616
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||| | ||||||||||||||| |  | |||   |||||| ||||||||||||| ||||||||| || ||||||    
T  50186487 acaaatttttatgacattgaataattttttattttatacgatttttggggtgcgaaatgctatttttgtattttagacaacttgtatgtgggataaaaag 50186586  T
Q  132 ttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||  ||| ||| |||||||||||||||    
T  50186587 ttgtgttgtggtttggtgagggacaaaaat 50186616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 29592870 - 29593030
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||| ||||||||| |||| |||    |||||||  |||||||||| || |||||| ||||||||||||||| ||| |||||    
T  29592870 ttgaataattttttgttttatatgatttttgggggacgaaatgccattttggatttttagacaacttttatgtgggacaaaaagttgtgctgtggtttag 29592969  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||| | ||||||||   ||||||||||   ||| ||||||| | |||||| ||| ||||||    
T  29592970 tgaagtacaaaaatatgagtttttgtcatgtcccttgcatccagtttgtcctgtacctgaa 29593030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 7555068 - 7554945
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||| || | |||   ||||||||  |||||||||| ||||| ||| ||||||||||||||   || |||||    
T  7555068 ttgaataattttttgttttatacgatttttggaggccgaaatgctattttggatttttagacaacttgtacgtgagacaaaaagttgtgttatggtttag 7554969  T
Q  148 tgagggacaaaaattctagttttt 171  Q
    ||| |||||||||| | |||||||    
T  7554968 tgaaggacaaaaatacgagttttt 7554945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 26083297 - 26083440
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttgg-tattttagacaatttgtatgtgtgacaaaaa 130  Q
    |||| |||||||| | |||||||||||  ||| ||||| | ||||||| |||| |||  ||||||||| | |||||||||| ||||| ||| ||||||||    
T  26083297 acaaatttttatggtattgaataatttcatgttttatatgctttttgggggacgaaatgttattttgggtgttttagacaacttgtaagtgggacaaaaa 26083396  T
Q  131 gttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    ||| ||| ||| ||| ||||||||||||||||  ||||||||||    
T  26083397 gttatgctgtggtttggtgagggacaaaaatttcagtttttgtc 26083440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 36497192 - 36497319
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||| | ||||||||||||||  ||||| ||   ||||||| |||||||||||| ||||||||  ||||||||||||||  ||| ||| |    
T  36497192 ttgagtaattttttattttatacgatttttgagggacagaatgctattttgatattttagacaacttgtatgttggacaaaaagttgtgatgtggtttgg 36497291  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  36497292 tgagggacaaaaatatgagtttttgtcc 36497319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 39078625 - 39078796
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | ||||||||||| || | ||||| ||||||||| ||||||||  |||||||||| |||||||||| | ||| ||  |||||||| |||||    
T  39078625 tttttatggtattgaataatttcttattttatatgatttttgggggacaaaatgttattttggtgttttagacaactcgtacgtaggacaaaaatttgtg 39078724  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
      ||| ||| ||||||||||||||||  || |||||||| |||  |||| || | |||||  ||||||||||    
T  39078725 ttgtggtttggtgagggacaaaaatttcaggttttgtcctatctcttgcctccagtttgttctgtccctgaa 39078796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 14296572 - 14296654
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    |||| ||||||||||| |||||||||||||||  |||||||  ||||||||||||||||||||| ||||| ||| ||||||||    
T  14296572 ttgagtaattttttgttttatacgatttttgggagacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 14296654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 14314820 - 14314902
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    |||| ||||||||||| |||||||||||||||  |||||||  ||||||||||||||||||||| ||||| ||| ||||||||    
T  14314820 ttgagtaattttttgttttatacgatttttgggagacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 14314902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 20694351 - 20694473
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| |||||  |||||||| ||||||||   |||||||||||||||||||| ||||| ||  |||||||||||| |  ||| ||| ||||||    
T  20694351 taattttttgttttatataatttttgggggacaaaatgctattttggtattttagacaacttgtacgttggacaaaaagttgcgttgtggtttggtgagg 20694450  T
Q  153 gacaaaaattctagtttttgtcc 175  Q
    |||||||||   |||||||||||    
T  20694451 gacaaaaatatgagtttttgtcc 20694473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 28115271 - 28115340
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||  ||| ||| |||||||||||||||    
T  28115271 tattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 28115340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 174
Target Start/End: Original strand, 9947894 - 9948030
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||||| || ||||| |||| || ||||| | ||||| ||||||||| || ||||||||||||||  | || ||||| ||| |||||||||||||      
T  9947894 ttttatgatattaaataaattttggttttatatggttttttgtggacaaaggactattttggtattttgaataacttgtacgtgagacaaaaagttgtaa 9947993  T
Q  138 agtgatttagtgagggacaaaaattctagtttttgtc 174  Q
     ||| |||||||||||| || |||| |||||||||||    
T  9947994 tgtggtttagtgagggataagaattttagtttttgtc 9948030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 23327897 - 23328021
Alignment:
Q  53 taattttttgtcttatacgatttttggtgg-acaaaagattattttggtattttagacaatttgtatgtgtgac-aaaaagttgtgcagtgatttagtga 150  Q
    ||||||||||| ||||||||||||||| || | ||||  ||||||||||||||||||||| ||||| ||| ||| |||||||||||  ||| |||  |||    
T  23327897 taattttttgttttatacgatttttggggggataaaatgttattttggtattttagacaacttgtacgtgggacaaaaaagttgtgttgtggtttgctga 23327996  T
Q  151 gggacaaaaattctagtttttgtcc 175  Q
    |||||||||||   |||||||||||    
T  23327997 gggacaaaaatatgagtttttgtcc 23328021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 45577829 - 45577689
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| ||||  ||||||| | ||||||||||||  ||||||  | |||||| ||||||||||  | ||||||||||||||||||| ||| | |    
T  45577829 gaacaacacatgacaaagttttatggtattgaataatttt--gtcttaatcaattttttgtggacaaaatgtcattttggtattttagacaacttgcacg 45577732  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
    || ||||||||||||||  ||| ||||| |||| |||| ||||    
T  45577731 tgggacaaaaagttgtgttgtggtttagcgaggaacaagaatt 45577689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 11056017 - 11056143
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  | || |||  ||||||||||||||| |||||| ||||  || |||| |||||||||  ||| ||| |    
T  11056017 ttgaataattttttgttttatacgatttttgaggcacgaaatgttattttggtatttttgacaatctgtacatgggacataaagttgtgttgtggtttgg 11056116  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    | ||||||||||||   ||||||||||    
T  11056117 taagggacaaaaatatcagtttttgtc 11056143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 12600869 - 12600987
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||| |||||||||   ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| |||  ||||||||    
T  12600869 ttttttgttttaaacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgatgagggac 12600968  T
Q  156 aaaaattctagtttttgtc 174  Q
    ||||||   ||||||||||    
T  12600969 aaaaatatgagtttttgtc 12600987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 175
Target Start/End: Complemental strand, 44355976 - 44355838
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgac-aaaaagttgtg 136  Q
    ||||||| | |||||||| |||| ||||| ||||||||||| ||||||||||| ||||||||||| | | |||| ||||| ||  ||| ||||| |||||    
T  44355976 ttttatgctattgaataacttttggtcttgtacgatttttgatggacaaaagactattttggtatatcatacaacttgtacgtaagacaaaaaaattgtg 44355877  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
      ||| |||| |||||||||||||||  | |||||||||    
T  44355876 ttgtggtttaatgagggacaaaaatttcaatttttgtcc 44355838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 47361531 - 47361411
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||| |||| ||||||||||| |||||||| ||||   ||||||||   |||||||||||||||||||| |||| ||   ||||||||||||||    
T  47361531 tttttatgatattgagtaattttttgttttatacgaatttttagggacaaaatgctattttggtattttagacaacttgt-tg---gacaaaaagttgtg 47361436  T
Q  137 cagtgatttagtgagggacaaaaat 161  Q
      ||| ||| |||||||||||||||    
T  47361435 ttgtggtttggtgagggacaaaaat 47361411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 50729609 - 50729527
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| ||||  ||||||||||  ||||||||||    
T  50729609 tattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgatagacaaaaatttcagtttttgtc 50729527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 985257 - 985326
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    ||||||||||||| |||||||| |||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  985257 ttgaataatttttggtcttatatgatttttgctggacaaaagactattttgatattttaaacaacttgta 985326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 37931895 - 37932008
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||||||| || |||||| |||||||| |||| |||   |||||||  |||||| |||| ||||||||  ||||||||||||||  ||| ||| |    
T  37931895 ttgaataatttttcgttttatacaatttttgggggacgaaatgctattttgacattttaaacaacttgtatgtaggacaaaaagttgtgttgtggtttgg 37931994  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  37931995 tgagggacaaaaat 37932008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 6776553 - 6776701
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||||||||||    |||||||   ||||||| | |||||||||| || || ||| ||||||||||||||  ||| ||| |    
T  6776553 ttgagtaattttttgttttatacgattttttagagacaaaatgatattttgatgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttgg 6776652  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgt 196  Q
    ||||||||||||||   |||||||||||  ||| |||| || |||||||    
T  6776653 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgt 6776701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 31446010 - 31445899
Alignment:
Q  24 aacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtg 123  Q
    ||||||| ||||  ||||||| | ||| |||||||||  |||| |||||||||| ||| ||||||  ||||||| |||||||||| |||||||| |||||    
T  31446010 aacacatgacaaacttttatggtattggataattttta-tcttgtacgattttttgtgaacaaaaagttatttttgtattttagataatttgtacgtgtg 31445912  T
Q  124 acaaaaagttgtg 136  Q
     ||||||||||||    
T  31445911 gcaaaaagttgtg 31445899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 56487356 - 56487281
Alignment:
Q  55 attttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    ||||||||| ||||| ||||||||| ||||||||  |||||||||||||||| |||| ||||| | ||||||||||    
T  56487356 attttttgttttatatgatttttggaggacaaaatgttattttggtattttaaacaacttgtacgcgtgacaaaaa 56487281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 37859346 - 37859244
Alignment:
Q  72 atttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagttttt 171  Q
    |||||| |||||||||| |||||||| || |||||||||| |||||| || ||||||||||||||   || |||| |||| || |||| || ||||||||    
T  37859346 attttttgtggacaaaaaattattttagtgttttagacaagttgtatttgagacaaaaagttgtgttatggtttattgagagataaaatttttagttttt 37859247  T
Q  172 gtc 174  Q
    |||    
T  37859246 gtc 37859244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 43189883 - 43189762
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||| | |||||||||||||||||||||||||| ||| |||||||| |  ||||||| ||| |||||| || ||| || || |||||||| |||||     
T  43189883 ttttatggtattgaataattttttgtcttatacgatatttagtggacaataagttatttttgta-tttagataacttgcatttgggacaaaaacttgtgt 43189785  T
Q  138 agtgatttagtgagggacaaaaa 160  Q
     ||| |||||||||  |||||||    
T  43189784 cgtggtttagtgagacacaaaaa 43189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 2630019 - 2629902
Alignment:
Q  91 ttattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatcta 190  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||   || | | |||||||||||||||   ||||||||||   ||| |||| ||||    
T  2630019 ttattttggtattttagacaacttgtacgtgagacaaaaagttgtgatttggtctggtgagggacaaaaatatgagtttttgtcatgtcctttgcctcta 2629920  T
Q  191 atttgtcatgtccctgaa 208  Q
     |||||| ||| ||||||    
T  2629919 gtttgtcctgtacctgaa 2629902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 7381255 - 7381340
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||||||||  |||||| |||||| ||||||||||| | |||||| |||||||||| |||||||| | |||| |||||||||||    
T  7381255 ttgaataatttttt--cttatatgatttt-ggtggacaaaaaactatttttgtattttagataatttgtacgcgtgaaaaaaagttgtg 7381340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 25978664 - 25978567
Alignment:
Q  106 agacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtcc 203  Q
    |||||| ||||| ||| ||||||||||||||   || ||| ||||||||||||||||  |||||||||||  | |||||| || ||||||||||||||    
T  25978664 agacaacttgtaagtgagacaaaaagttgtgatatggtttggtgagggacaaaaatttcagtttttgtcctgttcattgcctccaatttgtcatgtcc 25978567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 41261974 - 41262055
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaa 129  Q
    |||||||| |||| |||||||||| ||| | |||||||||||| || |||| |||||||||||| ||||| ||| |||||||    
T  41261974 ttgaataagttttggtcttatacgttttcttgtggacaaaagactaatttgctattttagacaacttgtaggtgagacaaaa 41262055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 42772733 - 42772818
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagtt 133  Q
    |||| ||||||||||| ||||| ||||||||| ||| ||||  |||||||||||||||||| || || || ||| |||||||||||    
T  42772733 ttgagtaattttttgttttatatgatttttggaggaaaaaatgttattttggtattttagataacttatacgtgggacaaaaagtt 42772818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 42869948 - 42870073
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagat--tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgattt 145  Q
    |||| ||||||||||| ||||||||||||||  |||||||| ||  |||||| ||||||||||||| || || ||| |||   ||||||||| ||| |||    
T  42869948 ttgagtaattttttgttttatacgatttttgagggacaaaa-atgctatttttgtattttagacaacttatacgtgggac---aagttgtgctgtggttt 42870043  T
Q  146 agtgagggacaaaaattctagtttttgtcc 175  Q
     |||||||||||||||   |||||||||||    
T  42870044 ggtgagggacaaaaatatgagtttttgtcc 42870073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 2858400 - 2858455
Alignment:
Q  75 tttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    |||| ||| ||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  2858400 tttgatggccaaaaaattattttggtattctagacaatttgtatgtgagacaaaaa 2858455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 159
Target Start/End: Original strand, 32858298 - 32858408
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| |||||| ||||||  || | |||  ||||||||| ||||||||| ||||| ||| || ||||||||||| ||   || |||||    
T  32858298 ttgaataattttttgttttatacaatttttaatg-ataaagaattattttgatattttagataatttatatttgagacaaaaagttatgttatggtttag 32858396  T
Q  148 tgagggacaaaa 159  Q
    ||||||||||||    
T  32858397 tgagggacaaaa 32858408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 44640302 - 44640353
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaa 88  Q
    |||||||||| ||||||||||||| ||||||||| || ||||||||||||||    
T  44640302 tttttatgatattgaataatttttagtcttatacaatctttggtggacaaaa 44640353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 3579089 - 3579187
Alignment:
Q  39 tttatgatgttgaataattttttgtcttatacgatttttg-gtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| |||||||||||||  | ||||| | |||||  | | |||||||| |||||||||||||||||||| ||| ||||  ||||||||||||||    
T  3579089 tttatgatattgaataatttttgtttttataaggtttttttgcgaacaaaagactattttggtattttagacaacttgaatgttggacaaaaagttgtg 3579187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 16320468 - 16320607
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  |||| ||||||||   ||||||||||||  || |||||||| |||||| |||  |||   |||||| ||||||||| |||  |||| |    
T  16320468 gaacaacacaagacaaatttttatggcattgaataatttt--gttttatacgagttttgggggatgaaattctatttttgtattttaggcaacctgtacg 16320565  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    || ||||||||||||||  ||| ||| |||||||||||||||    
T  16320566 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 16320607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 175
Target Start/End: Original strand, 21098498 - 21098636
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttgg-tggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||| || ||||| |||| |||| |||||||||||   |||| ||||  ||||||| ||||||||||||| || || ||| ||||||||||| ||    
T  21098498 ttttatgatattaaataacttttggtctaatacgatttttttatggagaaaatgttattttagtattttagacaaattttacgtgcgacaaaaagttatg 21098597  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
      ||| ||||||||| ||||| ||||  | |||||||||    
T  21098598 ttgtggtttagtgagagacaagaatttcaatttttgtcc 21098636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 43893560 - 43893662
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| |||||  ||||||||||||||||| | |||||| |||||||||| ||  || | ||| |||||||| |||||  ||| |||||||| ||||    
T  43893560 ttttttgttttatataatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtggtttagtgaaggac 43893659  T
Q  156 aaa 158  Q
    |||    
T  43893660 aaa 43893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 52673810 - 52673900
Alignment:
Q  72 atttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
    |||||||||||||||||  ||||||| |||||||||| || |  || ||| |||||||| |||||  | | ||||||||||||||||||||    
T  52673810 atttttggtggacaaaaatttatttttgtattttagataactcatacgtgagacaaaaaattgtgttgaggtttagtgagggacaaaaatt 52673900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 171
Target Start/End: Original strand, 30942763 - 30942886
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||||| |||| ||||| ||||||||| |||  |||   ||||||||| |||||||||| || |||||| | ||||| ||||||  ||| ||| |    
T  30942763 ttgaataatttcttgttttatatgatttttgggggatgaaatgatattttggtgttttagacaacttatatgtgaggcaaaatgttgtgttgtggtttgg 30942862  T
Q  148 tgagggacaaaaattctagttttt 171  Q
    |||| |||| |||||  |||||||    
T  30942863 tgagagacagaaatttcagttttt 30942886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 39513431 - 39513497
Alignment:
Q  82 gacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagt 148  Q
    ||||||||| ||||||||| |||| |||||| | ||| || ||||||||||||||| || |||||||    
T  39513431 gacaaaagactattttggtgttttcgacaatatatatttgagacaaaaagttgtgctgttatttagt 39513497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 40792406 - 40792480
Alignment:
Q  62 gtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||||||||||| |||||||||   |||||| |||||||||| || |||||  ||  |||||||||||||    
T  40792406 gtcttatacgatttttgatggacaaaaagctatttttgtattttagataacttgtacatgaaacaaaaagttgtg 40792480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 34560013 - 34559968
Alignment:
Q  91 ttattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||||| ||||||||| || ||||| |||||||||||||||    
T  34560013 ttattttggtactttagacaacttctatgtatgacaaaaagttgtg 34559968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 280187 - 280247
Alignment:
Q  57 tttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    |||| |||||||| ||| |||| | |||||||| |||||||||||||||||| || |||||    
T  280187 ttttggtcttataggatgtttgatagacaaaaggttattttggtattttagaaaacttgta 280247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 17327853 - 17327715
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||  ||||| |||||| |||| ||||||||||||||| |||||||| ||||||||||||||||||| ||||||||  || ||||||||||||||    
T  17327853 tttttatggcgttgagtaatttgttgttttatacgatttttgggggacaaaatattattttggtattttagataatttgtacatgagacaaaaagttgtg 17327754  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    | ||||||| |||||||||||||||   |||||||||||    
T  17327753 ctgtgatttggtgagggacaaaaatatgagtttttgtcc 17327715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 39281848 - 39282024
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||| |||| ||| |||||  |||||||||||| ||| ||||||||||||||| |||| |||  ||||||||||||||||||||| ||||| ||    
T  39281848 aacaacacatgacaactttgtatgacattgaataattttatgttttatacgatttttggaggacgaaatgttattttggtattttagacaacttgtacgt 39281947  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtc 197  Q
      ||||||||||||| | ||| ||| |||||||||||||||   |||||||||||  ||| ||||||||| ||||||    
T  39281948 aggacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcatctagtttgtc 39282024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 38663085 - 38663226
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  |||| |||||||||  |||||||||||||||| ||||||||||||||  ||||||||  |||||||| |||||||||||| ||||| |    
T  38663085 gaacaacacaggacaaatttttatgacattgaataattttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacg 38663184  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    || ||||||||||||||| ||| |||  ||||||||||||||    
T  38663185 tgggacaaaaagttgtgctgtggtttgctgagggacaaaaat 38663226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 844917 - 844757
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  844917 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 844818  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| |||| |||||| ||| ||||||    
T  844817 tgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaa 844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 16476348 - 16476188
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||| ||| |||||| |||||||| ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  16476348 ttgaataattttatgttttatacaatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttgg 16476249  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   ||||||| |||  ||| ||||||||| |||||| ||| ||||||    
T  16476248 tgagggacaaaaatatgagtttttatcctgtcccttgcatctagtttgtcctgtacctgaa 16476188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 26118408 - 26118248
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| || || ||| ||||||||||||||| ||||||| |    
T  26118408 ttgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttttacgtgggacaaaaagttgtgctgtgatttgg 26118309  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  26118308 tgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaa 26118248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 11772841 - 11772699
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | |||||| ||||||||| ||||||||||||||| |||| ||| | ||||||||||||| | |||||||||| ||| |||||||||    
T  11772841 acaaatttttatggttttgaattattttttgttttatacgatttttgggggacgaaatactattttggtatttaaaacaatttgtaggtgggacaaaaag 11772742  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||| ||| ||| |||||||||||||||   ||||||||||    
T  11772741 ttgtgctgtggtttggtgagggacaaaaatatcagtttttgtc 11772699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 15540110 - 15539972
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||| ||||||||  |||||||||| |||||||||| || || ||    
T  15540110 aacaacacatgacaagtttttatggtattgaataattttttgttttatatgatttttgggggacaaaatgttattttggtgttttagacaacttctacgt 15540011  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaa 159  Q
     |||||||||||||||| ||| ||| ||||  |||||||    
T  15540010 atgacaaaaagttgtgctgtggtttggtgaaagacaaaa 15539972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 13994296 - 13994108
Alignment:
Q  20 gaacaacacatcacaagtttt-tatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||  |||| |||| |||||| |||||||||||| ||| ||||| ||||||||| |||| |||   |||||||||||||||||||| |||||     
T  13994296 gaacaacacaagacaaattttgtatgatattgaataattttatgttttatatgatttttgg-ggacgaaatgctattttggtattttagacaacttgtac 13994198  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     || ||||||||||||||  ||| ||| ||||||||||||||||  |||||||||||| | | |||| || |||||||||||||| ||||    
T  13994197 atgagacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtccagttccttgcctccaatttgtcatgtccatgaa 13994108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 1601159 - 1601267
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| || |||||||||||||||||||||   |||||||||||||||||||| ||||||||| ||||||||||||||  ||| ||| ||||||    
T  1601159 taattttttgttttgtacgatttttggtggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagg 1601258  T
Q  153 gacaaaaat 161  Q
    |||||||||    
T  1601259 gacaaaaat 1601267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 16386835 - 16386995
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  16386835 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttgg 16386934  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| |||| |||||| ||| ||||||    
T  16386935 tgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaa 16386995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 42510506 - 42510633
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  42510506 ttgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 42510605  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    |||| |||||||||   |||||||||||    
T  42510606 tgagagacaaaaatatgagtttttgtcc 42510633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 6711239 - 6711079
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| |||||||| |||||  ||| ||| |    
T  6711239 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttgg 6711140  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| |||| |||||| ||| ||||||    
T  6711139 tgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaa 6711079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 205
Target Start/End: Original strand, 6771338 - 6771506
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttgg-tggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||| | |||||||||  || ||||||||||||||||   ||||||||| ||||||||| |||||||| ||| ||||||||| || |||||||||||    
T  6771338 ttttatggtattgaataatacttagtcttatacgatttttttatggacaaaatattattttgatattttagtcaacttgtatgtgggagaaaaagttgtg 6771437  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccct 205  Q
      ||||||||||||| ||||| |||| |||||||||||   ||| |||  |||||||| ||||||||||    
T  6771438 ttgtgatttagtgagtgacaagaattttagtttttgtcttgtcccttgtctctaatttatcatgtccct 6771506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 16451108 - 16451268
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||||||| ||||||||||||||  ||| ||| |    
T  16451108 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttgg 16451207  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||| |||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  16451208 tgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 16451268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 31004113 - 31004225
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||| ||||||||| |||| ||| | |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  31004113 ttgaataattttttgttttataggatttttgggggacgaaatactattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 31004212  T
Q  148 tgagggacaaaaa 160  Q
    |||||||||||||    
T  31004213 tgagggacaaaaa 31004225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 6029510 - 6029367
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | ||||||||||| |||| ||||| | ||||||| |||| |||  |||||||||| |||||||||| ||||| ||| |||||||||    
T  6029510 acaaatttttatggtattgaataatttcttgttttatatgctttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgggacaaaaag 6029411  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |||||  ||| ||| ||||||||||||||||  |||||||||||    
T  6029410 ttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcc 6029367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 28340496 - 28340370
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| |||      
T  28340496 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttga 28340397  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  28340396 tgagggacaaaaatatgagtttttgtc 28340370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 30105868 - 30105746
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||| ||| ||| ||| ||||||    
T  30105868 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttatgctgtggtttggtgagg 30105769  T
Q  153 gacaaaaattctagtttttgtcc 175  Q
    |||||||||   |||||||||||    
T  30105768 gacaaaaatatgagtttttgtcc 30105746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 45491068 - 45490942
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  45491068 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 45490969  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  45490968 tgagggacaaaaatatgagtttttgtc 45490942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 16437343 - 16437492
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||| |||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  16437343 ttgagtaattttttgttttatacgatttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 16437442  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtc 197  Q
    ||||||||||||||   |||||||||||  ||| |||| |||| ||||||    
T  16437443 tgagggacaaaaatatgagtttttgtcctgtcctttgcctctagtttgtc 16437492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 10384348 - 10384496
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||| ||||||||| |||| |||  ||||||||   ||||||| |||||||| ||| ||||||||||||||| ||| |||||    
T  10384348 ttgaataattttttgttttataagatttttgggggacgaaatgttattttgaatttttagataatttgtacgtgggacaaaaagttgtgctgtggtttag 10384447  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgt 196  Q
    ||| ||||||||||   ||||||||||   ||| ||||||| |||||||    
T  10384448 tgaaggacaaaaatatgagtttttgtcttgtcctttgcatccaatttgt 10384496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 46154870 - 46154970
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||||||||||||||| ||||| ||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  46154870 tttttatgacattgaataattttttgttttataagatttttgaaggacaaaatgttattttggtattttagacaacttgtaagtgggacaaaaagttgtg 46154969  T
Q  137 c 137  Q
    |    
T  46154970 c 46154970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 185
Target Start/End: Complemental strand, 50382607 - 50382459
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | ||||||||| |||||| ||||| ||||||||  ||||||||  ||||||| || |||||||||| ||||| ||| ||||||||||||||    
T  50382607 tttttatggtattgaataatattttgttttatatgatttttgagggacaaaatgttatttttgtgttttagacaacttgtacgtgggacaaaaagttgtg 50382508  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtccaatccattgc 185  Q
      ||| ||| |||| |||||||||||  |||||||||||  ||||||||    
T  50382507 ttgtggtttggtgaaggacaaaaatttcagtttttgtcctgtccattgc 50382459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 12890219 - 12890346
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||||||| |||||||| ||||| ||| ||||||||||||||| ||| |||      
T  12890219 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtatcttagacaacttgtacgtgggacaaaaagttgtgctgtggtttga 12890318  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  12890319 tgagggacaaaaatatgagtttttgtcc 12890346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 16704713 - 16704820
Alignment:
Q  54 aattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgaggg 153  Q
    |||||||||| ||||||||||||||| ||||||||   |||||||||||||||||||| ||||||||| |||||| |||||||  ||| ||| || ||||    
T  16704713 aattttttgttttatacgatttttggaggacaaaaagctattttggtattttagacaacttgtatgtgagacaaagagttgtgatgtggtttggtaaggg 16704812  T
Q  154 acaaaaat 161  Q
    ||||||||    
T  16704813 acaaaaat 16704820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 35387504 - 35387377
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||| ||||   |||||||||||||||||||| ||||| |||  |||||||||||||| ||| ||| |    
T  35387504 ttgagtaattttttgttttatacgatttttgagggataaaatgctattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttgg 35387405  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  35387404 tgagggacaaaaatatgagtttttgtcc 35387377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 42512963 - 42512836
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||||||||| ||  ||||||||||||||  ||| |||      
T  42512963 ttgaataattttttgttttatacgatttttgggggacaaaattctattttgatattttagacaatttgtacgtaggacaaaaagttgtgttgtggtttgc 42512864  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||| ||||||||   |||||||||||    
T  42512863 tgaggcacaaaaatatcagtttttgtcc 42512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 17887899 - 17888089
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtgg-acaaaagattattttggtattttagacaatttgta 117  Q
    ||||||||||| |||| ||||| |||   |||| |||||| |||| ||||||||||||||| || ||||||  ||||||||||||||||||||| |||||    
T  17887899 gaacaacacatgacaaattttttatggcattgagtaatttgttgttttatacgatttttggggggacaaaatgttattttggtattttagacaacttgta 17887998  T
Q  118 tgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     ||| ||||||||||||||  ||| ||| | |||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  17887999 cgtgggacaaaaagttgtgttgtggtttggcgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaa 17888089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 25539836 - 25539962
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||| |||| |||   ||||||||||||| | |||| ||||| ||| ||||||||||||||  ||| ||| |    
T  25539836 ttgaataattttttgttttatacgatttttgggggacgaaatgctattttggtatttaaaacaacttgtaggtgggacaaaaagttgtgttgtggtttgg 25539935  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  25539936 tgagggacaaaaatatcagtttttgtc 25539962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 41968074 - 41967916
Alignment:
Q  17 gcggaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttg 115  Q
    ||||||||| |||| |||| ||||| ||||   ||| ||||||||||| |||||| ||||||||  ||||||||  |||||||||||||||||||| |||    
T  41968074 gcggaacaatacatgacaaattttttatgacaatgagtaattttttgttttatacaatttttgggagacaaaaggctattttggtattttagacaacttg 41967975  T
Q  116 tatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    || ||| ||||||||||||||  ||| ||| || ||||||||||||   ||||||||||    
T  41967974 tacgtgagacaaaaagttgtgttgtggtttggtaagggacaaaaatatgagtttttgtc 41967916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 50304616 - 50304758
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||  | ||| |||||||||    
T  50304616 acaaatttttatgacattgaataattttttgttttatacgatttttggaggacaaaatgctattttgatattttagacaacttaaacgtgagacaaaaag 50304715  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||| ||| |||   |||||||||||||   ||||||||||    
T  50304716 ttgtgctgtggtttgcagagggacaaaaatatcagtttttgtc 50304758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 30798894 - 30798818
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaattt 114  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||| |||||    
T  30798894 ttttatgatattgaataatttttggtcttatacgatttttggtggacaacaaactattttggtattttagataattt 30798818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 32270334 - 32270461
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||   ||||||| |||||||||||| |||||  || ||||||||||||||| ||| ||| |    
T  32270334 ttgagtaattttttgttttatatgatttttgagggacaaaatgctattttgatattttagacaacttgtacatgggacaaaaagttgtgctgtggtttgg 32270433  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  32270434 tgagggacaaaaatatgagtttttgtcc 32270461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 32289547 - 32289377
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||||  |||||||||||| ||| |||||  |||||||  ||||||||   ||||||||||||||| |||| ||||| |||  ||||||||||||||    
T  32289547 ttttatgacattgaataattttatgttttatataatttttgagggacaaaatgctattttggtattttaaacaacttgtacgtggaacaaaaagttgtgc 32289448  T
Q  138 agtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     ||| ||| |||||||||||||||   ||||||||||   ||| |||| || |||||||| ||| ||||||    
T  32289447 tgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccaatttgtcctgtacctgaa 32289377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 47093063 - 47092977
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtatttta 106  Q
    ||||||||||| |||| ||||||| || ||||||||||||||| |||||||||||||| ||| |||||| |||||||| ||||||||    
T  47093063 gaacaacacatgacaaatttttataatattgaataattttttgccttatacgattttttgtgaacaaaaaattatttttgtatttta 47092977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 570339 - 570483
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  | || |||||||| |  |||||| |||||| |||||||| |||||||||||| ||||  |||||||| |||||||||||| || || |    
T  570339 gaacaacacaagataaatttttatggtactgaatacttttttatcttatacaatttttggtggaaaaaatgttattttgatattttagacaacttatacg 570438  T
Q  120 tgtgacaaaaagttgtgca--gtgatttagtgagggacaaaaatt 162  Q
     | ||||||||||||||||  ||| ||| ||||||||||||||||    
T  570439 cgagacaaaaagttgtgcattgtggtttggtgagggacaaaaatt 570483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 26764970 - 26764861
Alignment:
Q  66 tatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattcta 165  Q
    |||||||||||||  |||| ||| |||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||  |||||||||||||||   |    
T  26764970 tatacgatttttgagggacgaaatattattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggttcggtgagggacaaaaatataa 26764871  T
Q  166 gtttttgtcc 175  Q
    ||||||||||    
T  26764870 gtttttgtcc 26764861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 41972898 - 41973018
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||  | ||||||||  ||||||||||||||||||||| ||||| ||| |||||||||||||   ||| ||| ||||||    
T  41972898 taattttttgttttatacgattttgag-ggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtagtgtggtttggtgagg 41972996  T
Q  153 gacaaaaattctagtttttgtc 174  Q
    |||||||||   ||||||||||    
T  41972997 gacaaaaatatgagtttttgtc 41973018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 44738263 - 44738075
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| |||   |||| ||||||||||| ||||||||||||||  | | |||| | ||||||| |||||||||||| |||||     
T  44738263 gaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgaggaataaaa-actattttgctattttagacaacttgtac 44738165  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||| ||||||||||||||  ||| ||| |||||||||||||||   |||||| ||||  ||| |||| || || ||||||||| ||||||    
T  44738164 gtgggacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagttttggtcctgtcccttgcctccaagttgtcatgtacctgaa 44738075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 1351621 - 1351501
Alignment:
Q  55 attttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgaggga 154  Q
    ||||||||| ||||| ||||||||   |||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| ||||||||    
T  1351621 attttttgttttatatgatttttgagagacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaggga 1351522  T
Q  155 caaaaattctagtttttgtcc 175  Q
    |||||||   |||||||||||    
T  1351521 caaaaatatgagtttttgtcc 1351501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 6144195 - 6144019
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | |||||||||||| ||| ||||| |||||||||  |||||||  ||||||| || |||||||||| || || ||| || ||||||    
T  6144195 acaaatttttatggtattgaataattttctgttttatatgatttttgggtgacaaaatgttatttttgtgttttagacaacttctacgtgggagaaaaag 6144096  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||  ||| |||   ||||||||||||||  |||||||||||  ||| |||| || | ||||||||||| |||||    
T  6144095 ttgtgttgtggtttgccgagggacaaaaattgcagtttttgtcctgtcccttgcctccagtttgtcatgtctctgaa 6144019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 7183899 - 7184059
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||   ||||||| | ||| |||||||||||||||| ||||| ||  ||||||||||||||  ||| ||| |    
T  7183899 ttgagtaattttttgttttatacgatttttgagagacaaaatactatattggtattttagacaacttgtacgtaggacaaaaagttgtgttgtggtttgg 7183998  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    | ||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  7183999 taagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 7184059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 45658780 - 45658928
Alignment:
Q  26 cacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgac 125  Q
    ||||| |||| ||||||||   |||||||||||||||| ||||| ||||||||| |||| |||   ||||||||||||| | |||| ||||| ||| |||    
T  45658780 cacatgacaaatttttatggctttgaataattttttgttttatatgatttttgggggacgaaatgctattttggtatttaaaacaacttgtaggtgggac 45658879  T
Q  126 aaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||||||||  ||| ||| ||||| |||||||||   ||||||||||    
T  45658880 aaaaagttgtgttgtggtttggtgagcgacaaaaatatcagtttttgtc 45658928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 32468025 - 32467910
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | |||| ||||||||||||||||| ||||||| ||| |||||| | ||||||| |||| ||||||| ||||| ||  ||||||||||||||    
T  32468025 tttttatggtattgactaattttttgtcttatatgattttttgtgaacaaaaaactattttgatattgtagacaacttgtacgtaggacaaaaagttgtg 32467926  T
Q  137 cagtgatttagtgagg 152  Q
    |  || ||||||||||    
T  32467925 cgttggtttagtgagg 32467910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 24339830 - 24339671
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagt-gattta 146  Q
    |||||||||||||||| ||||||||| ||||| ||||||     |||||||||||||||||||| ||||| ||| || |||||||||||  || | |||     
T  24339830 ttgaataattttttgttttatacgatgtttgggggacaatgc--tattttggtattttagacaacttgtacgtgggaaaaaaagttgtgttgtggttttg 24339733  T
Q  147 gtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||||||||   |||||||||||  ||| |||| || | |||||||||| ||||||    
T  24339732 gtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaa 24339671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 51264476 - 51264602
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||||||||||   ||||||||   |||||| |||||||| |||| ||||| ||| ||||||||||||||  ||| ||| |    
T  51264476 ttgagtaattttttgttttatacgatttttaaaggacaaaatgctattttagtattttaaacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 51264575  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  51264576 tgagggacaaaaatatgagtttttgtc 51264602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 25343430 - 25343289
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  |||| |||||||||  |||||||||||||||  |||| |||||||||  |||| ||| | ||||||||  |||| ||||| ||||| |    
T  25343430 gaacaacacaagacaaatttttatgacattgaataattttttgctttatgcgatttttgagggacgaaatactattttggatttttggacaacttgtacg 25343331  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    || ||||||||||||| |  || |||||||| ||||||||||    
T  25343330 tgcgacaaaaagttgtactatggtttagtgaaggacaaaaat 25343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 49303546 - 49303434
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||| ||||||||  ||||||| ||||||||||||| ||||| ||  || ||||| |||||| ||| ||| |    
T  49303546 ttgagtaattttttgttttatacgatttttgg-ggacaaaatgttattttagtattttagacaacttgtacgtaggataaaaaattgtgctgtggtttgg 49303448  T
Q  148 tgagggacaaaaat 161  Q
    ||| ||||||||||    
T  49303447 tgaaggacaaaaat 49303434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 50540325 - 50540438
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| |||||| |||| ||||| ||||||||| ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| |||      
T  50540325 ttgagtaatttgttgttttatatgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttga 50540424  T
Q  148 tgagggacaaaaat 161  Q
    ||| ||||||||||    
T  50540425 tgaaggacaaaaat 50540438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 15324110 - 15324226
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| | ||| ||||||| |  | ||||||||||||||||||||||| |||| ||||||||  | ||||||| |||||||||||||||  |      
T  15324110 gaacaacacatgaaaagcttttatggtaataaataattttttgtcttatacgatgtttgatggacaaattactattttgatattttagacaatttacagt 15324209  T
Q  120 tgtgacaaaaagttgtg 136  Q
    || ||||||||||||||    
T  15324210 tgagacaaaaagttgtg 15324226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 46447665 - 46447771
Alignment:
Q  68 tacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagt 167  Q
    ||||||||||| ||||||||||| ||||||| ||||||||| || ||||| |||  |||||||||||||  || |||||  |||| | ||||||| ||||    
T  46447665 tacgatttttgatggacaaaagactattttgatattttagataacttgtacgtggaacaaaaagttgtgatgtaatttaaggaggaataaaaattttagt 46447764  T
Q  168 ttttgtc 174  Q
    |||||||    
T  46447765 ttttgtc 46447771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 504608 - 504459
Alignment:
Q  24 aacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtg 123  Q
    |||||||  ||| |||||||| | ||| | ||||||| ||| | |||||||||||||| ||||||   || ||||||||||||||||| || |||||| |    
T  504608 aacacatgtcaaatttttatggtattggacaatttttagtcctctacgatttttggtgaacaaaaagctactttggtattttagacaacttctatgtggg 504509  T
Q  124 acaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgt 173  Q
    ||||||| |||||   || ||||||||| ||||||| ||  |||||||||    
T  504508 acaaaaaattgtgttatggtttagtgagagacaaaattttcagtttttgt 504459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 4895374 - 4895434
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttaga 108  Q
    |||||||| |||| |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  4895374 ttgaataagttttagtcttatacgatttttggtgaacaaaaaattatttttgtattttaga 4895434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 42705426 - 42705318
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||| ||||||||| ||||||||   |||||||  |||| |||||| ||||| ||| ||| ||||||||||  ||| ||| ||||||    
T  42705426 taattttttgttttatatgatttttgggggacaaaatgctattttgacatttcagacaacttgtacgtgggacgaaaagttgtgttgtggtttggtgagg 42705327  T
Q  153 gacaaaaat 161  Q
    |||||||||    
T  42705326 gacaaaaat 42705318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 29032612 - 29032547
Alignment:
Q  51 aataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    |||| ||||||||||||||| ||||| ||||||||||| ||||||||  ||||||||||||||||||    
T  29032612 aatagttttttgtcttatacaatttt-ggtggacaaaaaattattttattattttagacaatttgta 29032547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 174
Target Start/End: Original strand, 31574323 - 31574461
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggac-aaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgt 135  Q
    ||||| |||| |||||||||||||||| |||| |||||||| || ||| |||| | |||||| |||||||| |||| |||||| |  ||||| ||||||     
T  31574323 tttttgtgatattgaataattttttgttttatgcgattttttgtagactaaaaaactatttttgtattttaaacaacttgtatataggacaataagttgc 31574422  T
Q  136 gcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |  |||| |||||||| || | ||||| |||||||||||    
T  31574423 gttgtgaattagtgagagatacaaattttagtttttgtc 31574461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 7837149 - 7837274
Alignment:
Q  83 acaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccat 182  Q
    |||||| | ||||||| |||||||||||| |||| |||| ||||||||||||||  ||||||| || | ||||||||| |  | ||||||||   ||| |    
T  7837149 acaaaatactattttgatattttagacaacttgtctgtgagacaaaaagttgtgatgtgatttggtaatggacaaaaaattcaatttttgtcatgtccct 7837248  T
Q  183 tgcatctaatttgtcatgtccctgaa 208  Q
    ||| |||| |||||||||| ||||||    
T  7837249 tgcctctagtttgtcatgttcctgaa 7837274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 20495095 - 20495006
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgaca 126  Q
    |||||||||  |||| ||||||||||| |||||| |||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||    
T  20495095 tttttatgacattgagtaattttttgttttatactatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggaca 20495006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 49799348 - 49799421
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaa 111  Q
    ||||||||| ||||||||| ||| ||||||| | ||||||  ||||||||||  ||||||||||||||||||||    
T  49799348 ttttatgatattgaataatatttggtcttattcaattttttatggacaaaagtctattttggtattttagacaa 49799421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 208
Target Start/End: Original strand, 5109718 - 5109869
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||| | |||||| |||||||| ||||||||  ||||||||  ||||||||||| |||||  |  ||||||||||||||  ||| ||| |||||||||    
T  5109718 tttttttttttatacaatttttgggggacaaaatgttattttgc-attttagacaacttgtactttggacaaaaagttgtgatgtggtttggtgagggac 5109816  T
Q  156 aaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||    |||||||||||  ||| |||| || |||||||| ||| ||||||    
T  5109817 aaaaacatgagtttttgtcctgtcccttgcctccaatttgtcttgtacctgaa 5109869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 16862602 - 16862491
Alignment:
Q  51 aataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtga 150  Q
    |||||||||| ||||| ||||||||||| || ||||||  |||||||  ||||||| ||||  | |||||   |||||||||||||| ||||||| | ||    
T  16862602 aataatttttggtcttgtacgatttttgatgtacaaaatgttattttattattttaaacaacctatatgtactacaaaaagttgtgcggtgatttggcga 16862503  T
Q  151 gggacaaaaatt 162  Q
     |||||||||||    
T  16862502 aggacaaaaatt 16862491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 26733571 - 26733662
Alignment:
Q  83 acaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||||| |||||||||||||||||||| |||||  || | ||||||||||||   || ||||||| ||||||| ||||  ||||||||||    
T  26733571 acaaaagactattttggtattttagacaacttgtacatgaggcaaaaagttgtgttatggtttagtgggggacaagaatttcagtttttgtc 26733662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 34663913 - 34663996
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||||| ||||| ||||||||   |||||||  |||||||| ||||||||||||||| || ||| | ||||||||||||    
T  34663913 taattttttgttttatatgatttttgagtgacaaaatgttattttgatattttagacaatttataagtgggtcaaaaagttgtg 34663996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 2761748 - 2761643
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||||||| || ||||| |||||||| || ||||||   |||||| |||||||||| ||||||||  || |||||||| |||||  ||| |||||    
T  2761748 ttgaataatttttggttttatatgatttttgttg-acaaaaatctatttttgtattttagataatttgtacttgagacaaaaaattgtgttgtggtttag 2761650  T
Q  148 tgaggga 154  Q
    |||||||    
T  2761649 tgaggga 2761643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 34284039 - 34283953
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtatttta 106  Q
    ||||||||||  ||||  ||||||| | |||||||| |||||| ||| ||||||||||  ||||||||||| ||||||| |||||||    
T  34284039 gaacaacacaagacaaacttttatggtattgaataagtttttgccttgtacgattttttatggacaaaagactattttgatatttta 34283953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 32215444 - 32215347
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    |||||||||||  |||  ||||||||| ||||| ||| ||| | | |||||||||||||||||| |||| | ||||||||| |||||| ||| |||||    
T  32215444 gaacaacacatatcaaacttttatgatattgaacaatctttagccatatacgatttttggtggagaaaacactattttggtgttttagtcaacttgta 32215347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 7836565 - 7836621
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaa 88  Q
    ||||||| ||||||| |||||||||||||||| |||||||| |||||| | ||||||    
T  7836565 acaagttattatgatattgaataattttttgttttatacgagttttggggcacaaaa 7836621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 38087145 - 38087049
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatc 188  Q
    ||||||||  |||||||||| |||||  || ||||||||||||||  ||| |||||||| ||||||||||   ||||||||||   |||||||||||    
T  38087145 tattttggatttttagacaacttgtacttgggacaaaaagttgtgatgtggtttagtgaaggacaaaaatatgagtttttgtcatgtccattgcatc 38087049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 47242716 - 47242645
Alignment:
Q  39 tttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaa 111  Q
    |||| ||| |||||||||||||  |||||||| ||||||  || |||||||| ||||||||||||||||||||    
T  47242716 tttacgatattgaataatttttgatcttatacaattttta-tgtacaaaagactattttggtattttagacaa 47242645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 51703355 - 51703268
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||| ||||||||||| |||||| |||||  | ||||||||  ||||||| |||||||||||||  |||| ||| ||||||||||||||    
T  51703355 ttgagtaattttttgttttataccattttgag-ggacaaaatgttatttttgtattttagacaacatgtaggtgggacaaaaagttgtg 51703268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 3415038 - 3414919
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||| ||||||||| ||||||||   ||||||||||||||| |||| | ||| ||| || ||||| || ||  ||  ||| |||||||||    
T  3415038 ttttttgttttatatgatttttgggggacaaaatgctattttggtattttaaacaactagtacgtgggataaaaaattatgatgtagtttggtgagggac 3414939  T
Q  156 aaaaattctagtttttgtcc 175  Q
    ||||||   |||||||||||    
T  3414938 aaaaatatgagtttttgtcc 3414919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 16643331 - 16643272
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgag 151  Q
    |||||| |||||||||||||  |||||||| ||||||||||||||  ||||||| |||||    
T  16643331 tatttttgtattttagacaacctgtatgtgggacaaaaagttgtgtcgtgatttggtgag 16643272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 39792800 - 39792902
Alignment:
Q  59 tttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaa 158  Q
    |||||||||||| ||||||||| || ||| | |||||||  |||||||||||||||||| |||  |||| ||||||||  ||| ||| |||| ||||||     
T  39792800 tttgtcttatacaatttttggttgataaatg-ttattttattattttagacaatttgtacgtgaaacaacaagttgtgttgtggtttggtgaaggacaag 39792898  T
Q  159 aatt 162  Q
    ||||    
T  39792899 aatt 39792902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 43310466 - 43310377
Alignment:
Q  48 ttgaataatttttt--gtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||||||||  ||||||||  ||||||  || |||||| | ||||||| ||||||| |||||||||||||| || |||||||||||    
T  43310466 ttgaataatttttttagtcttatataattttta-tgtacaaaaaactattttgatattttaaacaatttgtatgtgagataaaaagttgtg 43310377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 40856111 - 40856216
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttg------gtattttagacaatttgtatgtgtgacaaaaa 130  Q
    ||||||| || |||||| |||||| ||||||||| ||||||  |||| |||| ||||||||       |||||||||| ||||| |||||| ||||||||    
T  40856111 tttttatcatattgaattatttttggtcttatacaattttttatggataaaaaattatttttatttttgtattttagataatttatatgtgagacaaaaa 40856210  T
Q  131 gttgtg 136  Q
    ||||||    
T  40856211 gttgtg 40856216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 30104980 - 30105041
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    |||||||||||| ||||| ||| | | ||||||  ||||||||||||||||||||| |||||    
T  30104980 ttttttgtcttaaacgatatttagcgaacaaaatgttattttggtattttagacaacttgta 30105041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 40610746 - 40610791
Alignment:
Q  91 ttattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||||||||||||||| || ||| ||||| |||||||||||    
T  40610746 ttattttggtattttagacaacttatatatgtgataaaaagttgtg 40610791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 46815897 - 46815816
Alignment:
Q  73 tttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgaggga 154  Q
    ||||||| ||||||||  ||||||||||||||||||||| | ||| ||| || |||| ||||||   || ||||||||||||    
T  46815897 tttttggcggacaaaatgttattttggtattttagacaactagtacgtgggaaaaaaggttgtgatatggtttagtgaggga 46815816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 19214 - 19101
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||| |    
T  19214 ttgagtaattttttgttttatacgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttgg 19115  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  19114 tgagggacaaaaat 19101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 5968997 - 5968844
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||||||||| ||| || |||||||||||| ||| ||| |    
T  5968997 ttgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaatttgtacgtgggataaaaagttgtgctgtggtttgg 5968898  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgt 201  Q
    ||| ||||||||||   |||||||||||  ||| |||| |||| ||||||||||    
T  5968897 tgaaggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcatgt 5968844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 30543155 - 30542995
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||| ||| ||||||||||||||| ||||||||  ||||||||||||||||||||| ||||| ||| ||| ||||||||||  ||| ||| |    
T  30543155 ttgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacgaaaagttgtgttgtggtttgg 30543056  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  |||||||| || | |||||||||| ||||||    
T  30543055 tgagggacaaaaatatgagtttttgtcctgtccattgcctccagtttgtcatgtacctgaa 30542995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 10656835 - 10656665
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | |||||||||||||| | ||||||||||||| |||||||||   |||||||| |||||||||||||||||| ||| |||||||||    
T  10656835 acaaatttttatgttattgaataattttttcttttatacgattttttgtggacaaattgttattttgatattttagacaatttgtacgtgagacaaaaag 10656736  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtc 202  Q
    |||||  ||| ||| |||| ||||||||| |  |||||||||||  ||  |||| |||| |||||||||||    
T  10656735 ttgtgttgtggttttgtgaaggacaaaaaattcagtttttgtcctgtcttttgcctctagtttgtcatgtc 10656665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 29563388 - 29563199
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| |||   |||| ||||||||||| ||||||||||||||  |||||||| | |||||||||||||||||||| |||||     
T  29563388 gaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtac 29563289  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||| ||||||||||||||  ||| ||| |||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  29563288 gtgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcgagtttgtcctgtacctgaa 29563199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 34063100 - 34063260
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  34063100 ttgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 34063199  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     |||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  34063200 cgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 34063260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 4052462 - 4052612
Alignment:
Q  58 ttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaa 157  Q
    |||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |||||||||||    
T  4052462 ttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaa 4052561  T
Q  158 aaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||   |||||||||||  ||| |||| || |||||||| ||| ||||||    
T  4052562 aaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaa 4052612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 12753458 - 12753332
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| |||||| |||| ||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||| ||||||||||||||  ||| ||| |    
T  12753458 ttgagtaatttgttgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttgg 12753359  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||| ||||||||   ||||||||||    
T  12753358 tgaggaacaaaaatatgagtttttgtc 12753332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 31732036 - 31732162
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||||||| ||||||||||||| | ||| ||| |    
T  31732036 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgagacaaaaagttgtactgtggtttgg 31732135  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  31732136 tgagggacaaaaatatgagtttttgtc 31732162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 8673188 - 8673028
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  8673188 ttgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 8673089  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||||||| ||||||    
T  8673088 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaa 8673028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 29672456 - 29672296
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||||||||||||| || ||||| ||| ||||||||||||||  ||| ||| |    
T  29672456 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttgg 29672357  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| |||| |||||| ||| ||||||    
T  29672356 tgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaa 29672296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 32020134 - 32019974
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  |||||||| | |||||||||||||||||||| ||||| |||  |||||||||||||| ||| ||| |    
T  32020134 ttgagtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtggaacaaaaagttgtgctgtggtttgg 32020035  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||| ||||||   ||||||||||| | || |||| || | |||||| ||| ||||||    
T  32020034 tgagggataaaaatatgagtttttgtcctaccccttgcttccagtttgtcctgtacctgaa 32019974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 41548574 - 41548678
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| ||||||||  |||||||| |||||||||||| ||||| ||| |||||||||    
T  41548574 acaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaag 41548673  T
Q  132 ttgtg 136  Q
    |||||    
T  41548674 ttgtg 41548678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 45114000 - 45114168
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||| | || ||| |||||  |||||||||||| ||| ||||||||||||||| |||| |||   |||||||||||||||||||| |||||  |    
T  45114000 aacaacacatgataaatttgtatgacattgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacct 45114099  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatct 189  Q
     |||||||||||||| | ||| ||| |||||||||||||||   |||||||||||  ||| ||||||||    
T  45114100 atgacaaaaagttgtactgtggtttggtgagggacaaaaatatgagtttttgtcctctcccttgcatct 45114168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 6386548 - 6386675
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  6386548 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgg 6386647  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  6386648 tgagggacaaaaatatgagtttttgtcc 6386675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 7394942 - 7394787
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| |||| |||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||   || ||| ||||||    
T  7394942 taattttttgttttatgcgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttatggtttggtgagg 7394843  T
Q  153 gacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||   ||||||||||   ||| |||| |||| |||||||||| ||||||    
T  7394842 gacaaaaatatgagtttttgtcatgtcccttgcctctagtttgtcatgtacctgaa 7394787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 7591596 - 7591453
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| || || |||||||||||||    
T  7591596 acaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttatacgtgtgacaaaaag 7591497  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |||||  ||| |||  ||||| ||||||||   |||||||||||    
T  7591496 ttgtgttgtggtttgctgaggcacaaaaatatcagtttttgtcc 7591453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 15001428 - 15001598
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | |||||||||||| ||| ||||| ||||||||| ||||||| | | |||||||||||||||| || ||||| ||| ||||||||||||||    
T  15001428 tttttatggtattgaataattttctgttttatatgatttttgggggacaaatgct-attttggtattttagataacttgtacgtgggacaaaaagttgtg 15001526  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
      ||| ||| ||||||||||||||||  ||||||||| |  || ||||| || | |||||| ||||||||||    
T  15001527 ttgtggtttggtgagggacaaaaatttcagtttttgttctgtctattgcctccagtttgtcctgtccctgaa 15001598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 27103931 - 27104057
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||   ||||||| |||||||||||| ||||| ||| ||||||||||||||||||| ||| |    
T  27103931 ttgagtaattttttgttttatatgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttgg 27104030  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  27104031 tgagggacaaaaatatgagtttttgtc 27104057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 174
Target Start/End: Complemental strand, 14005188 - 14005051
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||| ||||||||||| |||||| ||||||  |||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  14005188 tttttatgacattgagtaattttttgttttatacaattttttatggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtg 14005089  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
      ||| ||| |||| ||||||||||   ||||||||||    
T  14005088 ttgtggtttggtgatggacaaaaatatgagtttttgtc 14005051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 25478215 - 25478328
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||||||||||   |||||||| | |||||||||||||||||||| ||||| ||  ||||||||||||||| |||||||      
T  25478215 ttgagtaattttttgttttatacgattttttagggacaaaatactattttggtattttagacaacttgtacgtaggacaaaaagttgtgctgtgatttga 25478314  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  25478315 tgagggacaaaaat 25478328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 30501101 - 30501230
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| |  | |||  ||||||| ||||||||| ||| ||||| ||| |||||||||    
T  30501101 acaaatttttatgacattgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgggacaaaaag 30501200  T
Q  132 ttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||| ||| ||| |||||||||||||||    
T  30501201 ttgtgctgtggtttggtgagggacaaaaat 30501230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 31513745 - 31513556
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| |||   |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| |||||     
T  31513745 gaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtac 31513646  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     |  ||||||||||||||| ||| ||| |||||||||||||||   |||||||||||  ||| |||| || | |||||||| | ||||||    
T  31513645 ctaggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatctacctgaa 31513556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 45446427 - 45446540
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  45446427 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 45446526  T
Q  148 tgagggacaaaaat 161  Q
    ||||| ||||||||    
T  45446527 tgaggaacaaaaat 45446540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 35225606 - 35225794
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  |||| |||||||| | |||||||||||  ||| ||||| |||||||||  ||| |||   |||||| ||||||||||||| |||||      
T  35225606 gaacaacacaagacaaatttttatggtattgaataatttcctgttttatatgatttttgggtgacgaaatgctatttttgtattttagacaacttgtact 35225705  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||||||||||  ||| ||| | ||||||||||||||  |||||||||||  ||| |||| || | |||||| ||||||||||    
T  35225706 tgtgacaaaaagttgtgatgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccagtttgtcctgtccctgaa 35225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 37618525 - 37618365
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| |||||| |||||||| |||| |||   ||||||||||||| | |||| ||||| ||| ||||||||||||||  ||| ||| |    
T  37618525 ttgaataattttttgttttatacaatttttgggggacgaaatgctattttggtatttaaaacaacttgtacgtgagacaaaaagttgtgttgtggtttgg 37618426  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || |||||||| ||| ||||||    
T  37618425 tgagggacaaaaatatcagtttttgtcctgtcctttgcctccaatttgtcctgtacctgaa 37618365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 37664416 - 37664256
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||   |||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  37664416 ttgagtaattttttgttttatatgatttttgagcgacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttgg 37664317  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| |||| |||||| ||| ||||||    
T  37664316 tgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaa 37664256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 10531250 - 10531337
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgt 135  Q
    |||||||||||||| ||||||| |||||||  |||||||||||||||||||||||| || |||||||||||||| || ||||||||||    
T  10531250 ttgaataattttttatcttataagattttttatggacaaaagattattttggtattctaaacaatttgtatgtgagataaaaagttgt 10531337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 16595282 - 16595155
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||||||| |||||||||||||||||||| ||||||   |||||| |||||||||| || ||||| ||| ||||||||||||||  |||  ||||    
T  16595282 ttgaataatttttggtcttatacgatttttggtgaacaaaaagctatttttgtattttagataacttgtacgtgggacaaaaagttgtgttgtggattag 16595183  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
     ||||||||||| |||  ||||||||||    
T  16595182 cgagggacaaaacttcatgtttttgtcc 16595155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 32303718 - 32303591
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  32303718 ttgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 32303619  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  32303618 tgagggacaaaaatatgagtttttgtcc 32303591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 41709749 - 41709876
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||||||||||||| || ||||| ||  ||||||||||||||| ||| ||| |    
T  41709749 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgttggacaaaaagttgtgctgtggtttgg 41709848  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  41709849 tgagggacaaaaatatgagtttttgtcc 41709876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 10467020 - 10467162
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  | |||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| ||| |||||||||    
T  10467020 acaaatttttatgacatagaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaag 10467119  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||  ||| |||  ||||| ||||||||   ||||||||||    
T  10467120 ttgtgttgtggtttgctgaggaacaaaaatatcagtttttgtc 10467162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 3251789 - 3251676
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||| ||||| ||  || |||||||||||  ||| ||| |    
T  3251789 ttgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtaggataaaaagttgtgatgtggtttgg 3251690  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  3251689 tgagggacaaaaat 3251676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 13407068 - 13406955
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||| | ||||||   |||||||||||||||||||| ||||| ||| |||||||| || ||| ||| ||| |    
T  13407068 ttgagtaattttttgttttatacgatttttggggcacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaaattatgctgtggtttgg 13406969  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  13406968 tgagggacaaaaat 13406955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 162
Target Start/End: Original strand, 54133 - 54256
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||| | |||||||||||||||||||| ||||||||| ||||| |||| |||||||| ||||||| || || ||||||||| ||||||||||||||     
T  54133 ttttatggtattgaataattttttgtcttaaacgattttttgtggataaaatattatttt-gtattttcgataacttgtatgtgggacaaaaagttgtga 54231  T
Q  138 agtgatttagtgagggacaaaaatt 162  Q
     ||| |||||  | |||||||||||    
T  54232 tgtggtttagcaaaggacaaaaatt 54256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 22999213 - 22999357
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgac-aaaaa 130  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| ||| ||| |||||    
T  22999213 acaaatttttatgacattgaataattttttgttttatacgatttttggaggacaaaatgctattttgatattttagacaagttgtacgtgggacaaaaaa 22999312  T
Q  131 gttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    ||| |||  || |||  ||||||||||||||   |||||||||||    
T  22999313 gttttgctatggtttgctgagggacaaaaatatcagtttttgtcc 22999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 29611215 - 29611028
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||  |||| |||||||| | ||||||||||| |||| ||||| | ||||||| |||| |||   ||||||||| |||||||||| || || ||    
T  29611215 aacaacacaggacaaatttttatggtattgaataatttcttgttttatatgctttttgggggacgaaatgctattttggtgttttagacaacttttacgt 29611116  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    | ||||||||||||||  ||| ||| | ||||||||||||||  |||||||||||  ||| |||| || | |||||  ||||||||||    
T  29611115 gggacaaaaagttgtgttgtggtttggcgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccctgaa 29611028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 17805667 - 17805789
Alignment:
Q  53 taattttttgtcttatacgatttttggt-ggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgag 151  Q
    ||||||||||| |||||||||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| |||||| ||||||||  || ||| |||||    
T  17805667 taattttttgttttatacgatttttgggaggacaaaatgttattttggtattttagacaacttgtacgtgagacaaagagttgtgctttggtttggtgag 17805766  T
Q  152 ggacaaaaattctagtttttgtc 174  Q
    | ||||||||   ||||||||||    
T  17805767 gaacaaaaatatgagtttttgtc 17805789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 174
Target Start/End: Complemental strand, 36426355 - 36426254
Alignment:
Q  73 tttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttg 172  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||||| ||||||||| ||||  ||| |||||| |  ||||||| || |||||||||    
T  36426355 ttttttgtggacaaaagactattttggtattttagacaacttgtatgtgagacaaaaagatgtgttgtggtttagtaaatgacaaaatttttagtttttg 36426256  T
Q  173 tc 174  Q
    ||    
T  36426255 tc 36426254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 39642839 - 39642968
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| |||||| |||||||| |||  |||   ||||||||||||||||||||  |||| ||| |||| ||||    
T  39642839 acaaatttttatgacattgaataattttttgttttatacaatttttgggggatgaaatgctattttggtattttagacaacctgtacgtgggacagaaag 39642938  T
Q  132 ttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||  ||| ||| |||||||||||||||    
T  39642939 ttgtgttgtggtttggtgagggacaaaaat 39642968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 15351684 - 15351795
Alignment:
Q  24 aacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtg 123  Q
    ||||||| | || |||||||||| ||||||||||||   | |||||||||||||||| || ||||  |||||||||||||||||||||||||||  || |    
T  15351684 aacacatgataaatttttatgatattgaataattttgatt-ttatacgatttttggttgataaaatgttattttggtattttagacaatttgtaactgag 15351782  T
Q  124 acaaaaagttgtg 136  Q
    |||||||||||||    
T  15351783 acaaaaagttgtg 15351795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 16485958 - 16485782
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | |||||||||||| ||| ||||| |||||||||  ||| |||   |||||| |||||||||| || || || ||  |||||||||    
T  16485958 acaaatttttatggtattgaataattttctgtattatatgatttttgggtgacgaaatgctatttttgtattttagaaaacttatacgtaggacaaaaag 16485859  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||| ||| ||| | ||||||||||||||  ||||||||| |  ||| |||| |  |||||||||||||||||||    
T  16485858 ttgtgctgtggtttggcgagggacaaaaattgcagtttttgttctgtcctttgccttcaatttgtcatgtccctgaa 16485782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 161
Target Start/End: Original strand, 34101469 - 34101593
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||  ||||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| |||  | |||||||| ||    
T  34101469 tttttatggcgttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtggaaaaaaaagttatg 34101568  T
Q  137 cagtgatttagtgagggacaaaaat 161  Q
      ||| ||| |||||||||||||||    
T  34101569 ttgtggtttggtgagggacaaaaat 34101593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 40389012 - 40389172
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||| | ||||||||||||||| |||| |||   |||||||| |||| | |||| ||||||||| ||||||||||||||| ||| ||| |    
T  40389012 ttgaataattttttattttatacgatttttgggggacgaaatgctattttggcatttaaaacaacttgtatgtgggacaaaaagttgtgctgtggtttgg 40389111  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||| || ||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  40389112 tgagagataaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaa 40389172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 159
Target Start/End: Original strand, 10932708 - 10932819
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||||||| ||||||||  |  |||  ||||||||||| |||||||||||||||||||| ||||| |||  || ||||||||||  ||| |||||    
T  10932708 ttgaataatttttggtcttataaaaaattttatggacaaaagactattttggtattttagacaaattgtacgtggaactaaaagttgtgatgtggtttag 10932807  T
Q  148 tgagggacaaaa 159  Q
    ||||||||||||    
T  10932808 tgagggacaaaa 10932819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 154
Target Start/End: Complemental strand, 10320421 - 10320304
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | ||||||||||||| || |||||||||| ||| | |||||||  |||||||| |||||||||||| ||||| |||||  |||||||||||    
T  10320421 tttttatggtattgaataatttttggttttatacgattgttgttagacaaaatgttattttgatattttagacaacttgtacgtgtggtaaaaagttgtg 10320322  T
Q  137 cagtgatttagtgaggga 154  Q
      ||| ||| ||||||||    
T  10320321 ttgtggtttggtgaggga 10320304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 158
Target Start/End: Original strand, 6460219 - 6460344
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgac-aaaaa 130  Q
    |||| |||||||| | ||||||||||||  ||||||||||||||||  |||||||||  ||||||||||||||||||||| || || ||| ||| |||||    
T  6460219 acaaatttttatggtattgaataatttt--gtcttatacgattttttatggacaaaatgttattttggtattttagacaacttatacgtgggacaaaaaa 6460316  T
Q  131 gttgtgcagtgatttagtgagggacaaa 158  Q
    ||||||  ||| ||| ||||| ||||||    
T  6460317 gttgtgatgtggtttggtgagagacaaa 6460344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 21272700 - 21272783
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |||||| ||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |||||||||||||||   |||||||||||    
T  21272700 tattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcc 21272783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 27109666 - 27109561
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||| ||||||||| |||| |||  |||||||||||||||| |||||||||| | | ||||||||||||||  ||| ||| || ||| ||    
T  27109666 ttttttgttttatatgatttttgggggacgaaatgttattttggtattttaaacaatttgtacgcgggacaaaaagttgtgttgtggtttggtaaggaac 27109567  T
Q  156 aaaaat 161  Q
    ||||||    
T  27109566 aaaaat 27109561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 14958921 - 14959031
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||||| || ||| ||||||  ||||||||||||||| |||| |||||  |||||||| |||||||||| | ||||| ||| ||||||||||||||     
T  14958921 ttttatgatattaaatcatttttgatcttatacgattttttgtgggcaaaaagttattttgatattttagac-acttgtacgtgggacaaaaagttgtgt 14959019  T
Q  138 agtgatttagtg 149  Q
     ||| |||||||    
T  14959020 tgtggtttagtg 14959031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 11926956 - 11926878
Alignment:
Q  55 attttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagtt 133  Q
    |||||| ||||||||| |||||||  | |||||||| |||||||||||||||||||| |||||  || |||||||||||    
T  11926956 atttttagtcttatacaatttttgaggcacaaaagactattttggtattttagacaaattgtacatgagacaaaaagtt 11926878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 28746284 - 28746353
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtatttta 106  Q
    |||||||||  |||||||||||||  |||| |||||||||||||| ||||||  ||||||||||||||||    
T  28746284 tttttatgacattgaataatttttgatcttgtacgatttttggtgaacaaaattttattttggtatttta 28746353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 11944854 - 11944934
Alignment:
Q  55 attttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgt 135  Q
    |||||| ||||||||| |||||||  | | |||||| |||||||||||||||||||| |||||  || |||||||||||||    
T  11944854 atttttagtcttatacaatttttgaggcaaaaaagactattttggtattttagacaaattgtacatgagacaaaaagttgt 11944934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 37474664 - 37474760
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    |||| ||||| |||| |||||||||  |||||||||||||| | ||||||||||||||| | | ||||   || ||||||||||||||||| |||||    
T  37474664 aacagcacatgacaaatttttatgacattgaataattttttattttatacgatttttggggaaaaaaacgctagtttggtattttagacaacttgta 37474760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 5859605 - 5859518
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgt 135  Q
    |||| ||||| || |||||||| |||||||  ||||||||| | |||||| |||||||||| || ||||| || ||||||||||||||    
T  5859605 ttgattaattattggtcttataagattttttatggacaaaatactattttagtattttagataacttgtacgtatgacaaaaagttgt 5859518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 17520583 - 17520678
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||||||||||||| ||||||||        || |||||| ||||| ||||||||| ||||||||||||||  ||| ||| |||||||||    
T  17520583 ttttttgttttatacgatttttgggggacaaaa--------tgctattttggacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggac 17520674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 3361866 - 3361789
Alignment:
Q  58 ttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgt 135  Q
    |||||||||||||||| || |||||||||||  |||||||||||  |||||||| |||||  || || ||||||||||    
T  3361866 ttttgtcttatacgatgttgggtggacaaaatgttattttggtagattagacaacttgtacttgagagaaaaagttgt 3361789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 18297498 - 18297444
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattt 104  Q
    ||||||||||||| |||||||||||||||| ||| |||||  |||||||||||||||    
T  18297498 ttgaataatttttggtcttatacgattttttgtgaacaaa--attattttggtattt 18297444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 3394309 - 3394369
Alignment:
Q  58 ttttgtcttatacgatttttggtggac-aaaagattattttggtattttagacaatttgta 117  Q
    |||||||||||||||| |||||||||| ||||  ||||||||||| ||||||||| |||||    
T  3394309 ttttgtcttatacgatgtttggtggacaaaaatgttattttggtaatttagacaacttgta 3394369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 7722344 - 7722261
Alignment:
Q  68 tacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgag 151  Q
    |||||| ||| |||||||||||||||||||| ||||||  ||||||| ||  | | ||||||||||||   |||||||||||||    
T  7722344 tacgatgttttgtggacaaaagattattttgatatttttaacaatttataattttaacaaaaagttgtaatgtgatttagtgag 7722261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 14012316 - 14012375
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttag 107  Q
    |||||||||  |||||||| |||||| ||||  |||||||| ||||||||||||||||||    
T  14012316 ttgaataatggtttgtcttgtacgatgtttgaaggacaaaaaattattttggtattttag 14012375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 5892074 - 5892128
Alignment:
Q  82 gacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||| |||| ||||||| ||||||||| || || ||||||||||||||||||    
T  5892074 gacaaaaaattaatttggtaatttagacaacttatacgtgtgacaaaaagttgtg 5892128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 9624181 - 9624239
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataa-ttttttgtcttatacgattttt 77  Q
    ||||||||||| |||| |||||||| | |||||||| ||||||||||||||| ||||||    
T  9624181 gaacaacacatgacaaatttttatggtattgaataatttttttgtcttatacaattttt 9624239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 22756520 - 22756430
Alignment:
Q  72 atttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
    |||||||||||| |||| | |||||| |||||||||| || ||||| |||  |||||||||||||  ||| | || ||||||| |||||||    
T  22756520 atttttggtggataaaaaactatttttgtattttagataacttgtacgtgatacaaaaagttgtgttgtggtataatgagggataaaaatt 22756430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 38260805 - 38260920
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttg--tcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    ||||||||||  ||||  ||||||| ||| |||| |||||||   |||||||| | ||||||| |  |||||| |||||||||||||||||| | || ||    
T  38260805 gaacaacacaaaacaaacttttatggtgtcgaattatttttttgttcttatacaaattttggtaggtaaaagactattttggtattttagac-acttata 38260903  T
Q  118 tgtgtgacaaaaagttg 134  Q
    |||| ||||||||||||    
T  38260904 tgtgggacaaaaagttg 38260920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 27408987 - 27409019
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatac 70  Q
    |||||||||||||||||||||||| ||||||||    
T  27408987 ttttatgatgttgaataattttttatcttatac 27409019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 48445470 - 48445623
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||| |||| |||||||| | ||||||||||| |||| ||||| ||||||||| ||||||||  ||||||| || |||||||||| |||||||     
T  48445470 aacaacacatgacaaatttttatggtattgaataatttcttgttttatatgatttttgggggacaaaatgttattttcgtgttttagacaacttgtatgc 48445569  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    | ||||||||||||| | ||||||| |||| |||||||||||  ||||||||||    
T  48445570 gagacaaaaagttgtcctgtgatttggtgaaggacaaaaatttcagtttttgtc 48445623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 15035400 - 15035284
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| |||| |||||||| | |||||||||||||||| || ||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  15035400 gaacaacacatgacaaatttttatggtattgaataattttttgttttgtacgatttttggtgggcaaaatgttattttgatattttagacaatttgtatg 15035301  T
Q  120 tgtgacaaaaagttgtg 136  Q
    ||  |||||||||||||    
T  15035300 tggtacaaaaagttgtg 15035284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 26371928 - 26371768
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||   |||||| ||||||||||||| ||||| ||| ||||||||||||||| ||||||| |    
T  26371928 ttgaataattttttgttttatacgatttttgagggacaaaatgctattttagtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttgg 26371829  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  26371828 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 26371768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 40753131 - 40753291
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||| |    
T  40753131 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtgatttgg 40753230  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  40753231 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 40753291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 208
Target Start/End: Original strand, 44748676 - 44748831
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||| ||||||||   |||||||||||||||||||| ||||| ||| |||||||||||||   ||| ||| ||||||    
T  44748676 taattttttgttttatacgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtattgtggtttggtgagg 44748775  T
Q  153 gacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||  ||||||||| |  ||| |||| |||| |||||||||| ||||||    
T  44748776 gacaaaaatttgagtttttgttctgtcccttgcctctagtttgtcatgtacctgaa 44748831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 18386472 - 18386614
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| ||||  |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| |||||     
T  18386472 gaacaacacatgacaaattttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtac 18386571  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    ||| ||||||||||||||| ||| ||| |||||||||||||||    
T  18386572 gtgggacaaaaagttgtgctgtggtttggtgagggacaaaaat 18386614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 26652826 - 26652955
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| ||| |||||||||    
T  26652826 acaaatttttatgacattgaataattttttgttttatacgatttttggcggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaag 26652925  T
Q  132 ttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||| ||| |||  ||||||||||||||    
T  26652926 ttgtgctgtggtttgctgagggacaaaaat 26652955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 11322004 - 11321844
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  11322004 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 11321905  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  11321904 tgagggacaaaaatatgagtttttgtcctgtccgttgcctccagtttgtcctgtacctgaa 11321844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 36769688 - 36769528
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||   |||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  36769688 ttgagtaattttttgttttatacgatttttgagagacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 36769589  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| |||| |||||| ||| ||||||    
T  36769588 tgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaa 36769528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 30849365 - 30849238
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||| ||||||||  |||||||||||||||| |||| |||||| || ||||||||||||||  ||| ||| |    
T  30849365 ttgagtaattttttgttttatacgatttttgggggacaaaatgttattttggtattttatacaacttgtatatgggacaaaaagttgtgttgtggtttgg 30849266  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  30849265 tgagggacaaaaatatgagtttttgtcc 30849238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 34295539 - 34295397
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||| ||||||||| ||||||||   ||||||| |||||||||||| ||||| ||| |||||||||    
T  34295539 acaaatttttatgacattgaataattttttgttttatatgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaag 34295440  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||| ||| |||  ||||||||||||||   ||||||||||    
T  34295439 ttgtgctgtggtttgctgagggacaaaaatatcagtttttgtc 34295397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 47953166 - 47953292
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  47953166 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 47953265  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  47953266 tgagggacaaaaatatgagtttttgtc 47953292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 21784847 - 21785007
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||| ||| ||||||||||||||| ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  21784847 ttgagtaattttatgttttatacgatttttggaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 21784946  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||  |||| || | |||||||||| ||||||    
T  21784947 tgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcatgtgcctgaa 21785007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 26994344 - 26994184
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||||||||||   ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  26994344 ttgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 26994245  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   || ||||||||  ||| |||| || | |||||||||| ||||||    
T  26994244 tgagggacaaaaatatgagattttgtcctgtcccttgcctccagtttgtcatgtacctgaa 26994184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 29661299 - 29661459
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||||||||||||| || ||||| ||| || |||||||||||| ||| ||| |    
T  29661299 ttgagtaattttttgttttatacgatttttgtgggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgctgtggtttgg 29661398  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||||||| ||||||    
T  29661399 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaa 29661459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 329425 - 329572
Alignment:
Q  27 acatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgaca 126  Q
    |||| |||| |||||||| | ||||||||||| |||| ||||| ||||||||| ||||||||   ||||||||| |||||| ||| ||||| ||| ||||    
T  329425 acatgacaaatttttatggtattgaataatttcttgttttatatgatttttgggggacaaaatgctattttggtgttttaggcaacttgtacgtgggaca 329524  T
Q  127 aaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||  ||| ||| ||||||||||||||||  ||||||||||    
T  329525 aaaagttgtgatgtggtttggtgagggacaaaaatttcagtttttgtc 329572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 46633673 - 46633799
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  46633673 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 46633772  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||| ||||||   ||||||||||    
T  46633773 tgagggataaaaatatgagtttttgtc 46633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 23349438 - 23349297
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||| ||||| |||| ||||||| |  |||||||||||||||| || ||||||| |||| |||| |||  | ||||| ||||||||||||| |||||||    
T  23349438 gaacagcacatgacaaatttttataacattgaataattttttgttttctacgattgttgggggacgaaatgtcattttagtattttagacaacttgtatg 23349339  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    || ||||||||||||||  ||| ||| |||||||||||||||    
T  23349338 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 23349297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 10932676 - 10932516
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||  ||| |    
T  10932676 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtagtttgg 10932577  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  10932576 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 10932516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 29992820 - 29992729
Alignment:
Q  41 tatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagtt 133  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| || ||||| ||| |||||||||||    
T  29992820 tatgattttgaataatttttggtcttatacgatttttggtggacaaaaaattatttt-gtattttagataacttgtacgtgagacaaaaagtt 29992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 47316817 - 47316657
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||| ||||||||| ||| ||||| ||||||||||||||  ||| ||| |    
T  47316817 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtaatttagacaacttgcatgtgagacaaaaagttgtgttgtggtttgg 47316718  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  47316717 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 47316657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 18470660 - 18470787
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||| ||| ||| ||| |    
T  18470660 ttgagtaattttttgttttatatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttatgctgtggtttgg 18470759  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    |||| |||||||||   |||||||||||    
T  18470760 tgagagacaaaaatatgagtttttgtcc 18470787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 41211320 - 41211159
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagat--tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgattt 145  Q
    |||| ||||||||||| |||||||||||||   ||| |||| ||  |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| |||    
T  41211320 ttgagtaattttttgttttatacgattttttagggataaaa-atgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggttt 41211222  T
Q  146 agtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     |||||||||||||||   |||||||||||  ||| |||| |||| |||||| ||| ||||||    
T  41211221 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcttgtacctgaa 41211159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 30599156 - 30599014
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| ||||  |||| |||||| |||| ||||||||||||| | ||||||||  |||||||||||||||||| ||||||||     
T  30599156 gaacaacacatgacaaattttttatgaaattgagtaatttgttgttttatacgatttttaggggacaaaatgttattttggtattttagataatttgtac 30599057  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
     || ||||||||||||||  ||| |||  ||||||||||||||    
T  30599056 ttgagacaaaaagttgtgttgtggtttgatgagggacaaaaat 30599014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 38301308 - 38301445
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||||||||||||||| | ||||||||||||| ||||||||  |||||||| |||||||||||| ||||  ||| ||||||||||||||    
T  38301308 tttttatgacattgaataattttttgtttaatacgatttttgggggacaaaatgttattttgatattttagacaacttgt-cgtgggacaaaaagttgtg 38301406  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
      ||| |||  ||||||||||||||   |||||||||||    
T  38301407 ttgtggtttgctgagggacaaaaatatcagtttttgtcc 38301445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 48699358 - 48699500
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    ||||| ||||||| | |||||| | |||| ||||| |||||||||| ||||||| |||  |||||||||||||||||||| ||||| |||  ||||| ||    
T  48699358 acaagcttttatggtattgaatgacttttggtcttgtacgattttttgtggacataagtctattttggtattttagacaacttgtacgtggaacaaatag 48699457  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||  ||| ||||||||||||||| ||||  ||||||||||    
T  48699458 ttgtgttgtggtttagtgagggacaagaatttcagtttttgtc 48699500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 174
Target Start/End: Complemental strand, 29372908 - 29372772
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||| | || |||||||||| |||||||| ||||||||||||| ||||| ||| ||||  ||||||||||| |||||  ||  ||| |||||||||     
T  29372908 ttttatggtattaaataatttttggtcttatatgatttttggtggataaaaggttaatttgaaattttagacaacttgtacatggaacagaaagttgtgt 29372809  T
Q  138 agtgatttagtgagggacaaaaattctagtttttgtc 174  Q
     ||| |||||||| ||||||||||| |||||||||||    
T  29372808 tgtggtttagtgacggacaaaaattttagtttttgtc 29372772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 32873917 - 32873761
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| |||   |||| ||||||||||| ||||||||||||||  ||||||||   ||||||||||||| |||||| |||||     
T  32873917 gaacaacacatgacaaattttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtatttcagacaacttgtac 32873818  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    ||| ||||||||||||||  ||| ||| |||| ||||||||||   |||||||||||    
T  32873817 gtgagacaaaaagttgtgttgtggtttggtgaaggacaaaaatatgagtttttgtcc 32873761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 48894693 - 48894833
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||| ||||||||| ||||||||  |||||||||  |||||||  ||||||| ||| ||||||||||||||  ||| |||||    
T  48894693 ttgaataattttttgttttataagatttttgggggacaaaatgttattttggatttttagatgatttgtacgtgggacaaaaagttgtgatgtggtttag 48894792  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatc 188  Q
    |||  |||||||||   |||||||||||  ||| |||||||    
T  48894793 tgaatgacaaaaatatgagtttttgtcctgtcccttgcatc 48894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 1870099 - 1870238
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtgg-acaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgt 135  Q
    |||||||||  |||| ||||||||||| |||||||||||||   || ||||||  |||||||| |||||||||||| ||||| ||| |||||||||||||    
T  1870099 tttttatgacattgagtaattttttgttttatacgatttttttagggacaaaatgttattttgatattttagacaacttgtacgtgggacaaaaagttgt 1870198  T
Q  136 gcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |  ||| ||| |||||||||||||||   |||||||||||    
T  1870199 gttgtggtttggtgagggacaaaaatatgagtttttgtcc 1870238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 9913473 - 9913612
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||| ||||| |||| ||||||||   ||||||||||||| || ||||||||||||||| |||| |||  |||||||||||||||||||||  |||| |    
T  9913473 gaacaccacatgacaaatttttatggaattgaataatttttagttttatacgatttttgggggacgaaatgttattttggtattttagacaacctgtacg 9913572  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaa 159  Q
    || || |||||||||||  ||| ||| ||||| |||||||    
T  9913573 tgggaaaaaaagttgtgatgtggtttggtgagcgacaaaa 9913612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 9927161 - 9927300
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||| ||||| |||| ||||||||   ||||||||||||| || ||||||||||||||| |||| |||  |||||||||||||||||||||  |||| |    
T  9927161 gaacaccacatgacaaatttttatggaattgaataatttttagttttatacgatttttgggggacgaaatgttattttggtattttagacaacctgtacg 9927260  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaa 159  Q
    || || |||||||||||  ||| ||| ||||| |||||||    
T  9927261 tgggaaaaaaagttgtgatgtggtttggtgagcgacaaaa 9927300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 41903699 - 41903604
Alignment:
Q  22 acaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    ||||||||||| ||  ||||||| | ||||| |||||||||| ||||| ||| |||||||||||||||| |||||| |||||||||||||||||||    
T  41903699 acaacacatcataaacttttatggtcttgaacaattttttgttttatatgatgtttggtggacaaaagactattttagtattttagacaatttgta 41903604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 43368149 - 43368304
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||| ||||| |||| ||||||| |  |||||||||||||||| |||||||||||| |  ||||||||   ||||||| |||||||||||| ||||| |    
T  43368149 gaacagcacatgacaaatttttatcacattgaataattttttgttttatacgattttggagggacaaaatgctattttgatattttagacaacttgtacg 43368248  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |  ||||||||||||||| ||| |||  ||||| ||||||||   |||||||||||    
T  43368249 taggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtcc 43368304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 3922814 - 3922696
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||||||||||||  ||||||||   ||||||||||||||||| || ||||| ||| ||||||||||||||| ||| ||| |||||| ||    
T  3922814 ttttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgctgtggtttggtgaggaac 3922715  T
Q  156 aaaaattctagtttttgtc 174  Q
    ||||||   ||||||||||    
T  3922714 aaaaatatgagtttttgtc 3922696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 17237052 - 17237178
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||| ||||||||| |||| |||  |||||||||  ||||||| |||||||| ||| ||||||||||||||  ||| |||||    
T  17237052 ttgaataattttttgttttataagatttttgggggacgaaatgttattttggatttttagataatttgtacgtgagacaaaaagttgtgttgtggtttag 17237151  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    |||  |||||||||   ||||||||||    
T  17237152 tgaatgacaaaaatatgagtttttgtc 17237178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 21133356 - 21133454
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgaggga 154  Q
    |||||||| |||||||||||||||  ||| |||   |||||||||||||||||||||||||||||| ||||||||||||||  ||| |||| |||||||    
T  21133356 ttttttgttttatacgatttttgggagacgaaatgctattttggtattttagacaatttgtatgtgagacaaaaagttgtgatgtggtttattgaggga 21133454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 47947736 - 47947825
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| |||||||||||||||    
T  47947736 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgc 47947825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 22724650 - 22724490
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||| ||| ||||| |||||||||  ||| |||   |||||| ||||||||||||| ||||| ||| |||| ||||||| || ||| ||| |    
T  22724650 ttgaataattttctgtattatatgatttttgggcgacgaaatgctatttttgtattttagacaacttgtacgtgggacataaagttgcgctgtggtttgg 22724551  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||||||||  || |||||||  |||| |||| || | |||||| ||||||||||    
T  22724550 tgagggacaaaaattgcagcttttgtcatatcccttgcctccagtttgtcctgtccctgaa 22724490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 43158805 - 43158645
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||| | |||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  43158805 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttgatgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 43158706  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    | ||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  43158705 taagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 43158645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 3892145 - 3892018
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||| ||||||||||  | ||||||   |||||||||||| ||||||| ||||| ||  ||||||||||||||| ||||||| |    
T  3892145 ttgagtaattttttgttttacacgatttttgaggaacaaaatgctattttggtattctagacaacttgtacgtaggacaaaaagttgtgctgtgatttgg 3892046  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    |||| |||||||||   |||||||||||    
T  3892045 tgagagacaaaaatatgagtttttgtcc 3892018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 41665710 - 41665567
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | |||||||||||| ||| |||||  ||||||||  ||| |||   |||||| ||||||||||||| ||||| ||| |||||||||    
T  41665710 acaaatttttatggtattgaataattttctgttttatataatttttgggtgacgaaatgctatttttgtattttagacaacttgtacgtgagacaaaaag 41665611  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |||||  ||| ||| | ||||||||||||||  |||||||||||    
T  41665610 ttgtgatgtggtttggcgagggacaaaaattgcagtttttgtcc 41665567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 22631722 - 22631827
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||||||||||||| |||| ||| || ||||||||||||||||||| ||||| || | |||||||||| ||  ||| ||| |||| ||||    
T  22631722 ttttttgttttatacgatttttgggggacgaaatatcattttggtattttagacaacttgtacgtataacaaaaagttatgttgtggtttggtgaaggac 22631821  T
Q  156 aaaaat 161  Q
    ||||||    
T  22631822 aaaaat 22631827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 34117400 - 34117541
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  |||| ||||||||   ||||||||||||| || ||||||||||||||| |||| |||   |||||||| ||||||||||| |||||      
T  34117400 gaacaacacaagacaaatttttatggcattgaataatttttcgttttatacgatttttgggggacgaaatgctattttggcattttagacaacttgtaca 34117499  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    ||  ||||||| |||||  ||| ||| |||||||||||||||    
T  34117500 tggaacaaaaaattgtgatgtggtttggtgagggacaaaaat 34117541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 43214060 - 43213931
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||| ||||||||| ||||| ||||||||  | || |||   |||||||||||||| ||||| ||||||||| |||||||||    
T  43214060 acaaatttttatgacattgaatcattttttgttttataggatttttgaggcacgaaatgctattttggtatttttgacaacttgtatgtgggacaaaaag 43213961  T
Q  132 ttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||  ||| ||| |||| ||||||||||    
T  43213960 ttgtgttgtggtttggtgaaggacaaaaat 43213931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 46408865 - 46408978
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||| | ||||||||||||||   ||||| |   ||||||| |||||||||||| ||||||||  ||||||||||||||| ||| ||| |    
T  46408865 ttgagtaattttttattttatacgatttttgagagacaatatgctattttgatattttagacaacttgtatgtcggacaaaaagttgtgctgtggtttgg 46408964  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  46408965 tgagggacaaaaat 46408978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 46448763 - 46448650
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||| ||||||| | |||| |||  |||||||||  ||||||| ||||| ||  || ||||||||||||||| ||| |||||    
T  46448763 ttgaataattttttgttttataagatttttaggggacgaaatgttattttggatttttagataatttatacatgggacaaaaagttgtgctgtggtttag 46448664  T
Q  148 tgagggacaaaaat 161  Q
    ||| ||||||||||    
T  46448663 tgacggacaaaaat 46448650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 43189362 - 43189235
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtgg-acaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgattta 146  Q
    |||| |||||| |||| | ||||||||||||| || |||||| | |||||||||||| ||||||| ||||| ||| || |||||||||||  ||| |||     
T  43189362 ttgagtaatttgttgtttcatacgatttttggggggacaaaatactattttggtattctagacaacttgtacgtgggataaaaagttgtgttgtggtttg 43189263  T
Q  147 gtgagggacaaaaattctagtttttgtc 174  Q
    |||||||||||||||   ||||||||||    
T  43189262 gtgagggacaaaaatatgagtttttgtc 43189235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 1363585 - 1363725
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| |||| ||||||||   |||||||||||||||| |||||| |||||||| | || |||   |||||| ||||||| |||||  |||| |    
T  1363585 gaacaacacatgacaaatttttatggcattgaataattttttgttttatacaatttttgg-gtacgaaatgctatttttgtatttttgacaacctgtacg 1363683  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    || ||||||||||||||  ||| |||  ||||||||||||||    
T  1363684 tgagacaaaaagttgtgatgtggtttgatgagggacaaaaat 1363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 20127273 - 20127378
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||||||||||||| |||| |||  | |||||||||||||| |||| ||||| ||| ||||||||||||||  ||| |||  ||||| ||    
T  20127273 ttttttgttttatacgatttttgggggacgaaatgtcattttggtattttacacaaattgtacgtgggacaaaaagttgtgatgtggtttgctgaggaac 20127372  T
Q  156 aaaaat 161  Q
    ||||||    
T  20127373 aaaaat 20127378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 30052925 - 30053046
Alignment:
Q  52 ataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgag 151  Q
    ||||| ||| ||||||||| ||||||| || |||||  | ||||||| |||||||||||| || |||| | |||||||| || ||| ||| ||||||||     
T  30052925 ataatatttggtcttatacaatttttgatgaacaaacaactattttgatattttagacaacttatatgcgagacaaaaaattatgccgtgttttagtgaa 30053024  T
Q  152 ggacaaaaattctagtttttgt 173  Q
    |||||| |||| ||||||||||    
T  30053025 ggacaagaattttagtttttgt 30053046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 46627146 - 46627259
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| |||||| ||||||||  ||| ||| | |||||| ||||||||||||||  ||| ||| |||||||| |||||| ||| |||      
T  46627146 ttgaataattttttgttttatacaatttttgggagacgaaatactatttttgtattttagacaatccgtacgtgagacaaaaaattgtgctgtggtttga 46627245  T
Q  148 tgagggacaaaaat 161  Q
    ||||||| ||||||    
T  46627246 tgagggataaaaat 46627259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 30260042 - 30259938
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||| |||||||||||||  |||||||||| ||||| || | |||| |||| |||| |||||||||||| ||||| ||  || ||||||    
T  30260042 acaaatttttatgatattgaataatttttgatcttatacgagttttgatgaataaaaaattaatttgatattttagacaacttgtaagtaagataaaaag 30259943  T
Q  132 ttgtg 136  Q
    |||||    
T  30259942 ttgtg 30259938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 34519528 - 34519644
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaa 191  Q
    |||||| ||||||||||||| |||||  || ||||||||||||||  ||| ||| | ||||||||||||||  |||||||||||  ||| |||| || |     
T  34519528 tatttttgtattttagacaacttgtacctgggacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttgtcctgtcccttgcctccag 34519627  T
Q  192 tttgtcatgtccctgaa 208  Q
     ||||||||||||||||    
T  34519628 cttgtcatgtccctgaa 34519644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 42332059 - 42332123
Alignment:
Q  72 atttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||||| ||||  |||||||| ||||| |||||||||||||||| ||||||||||||||    
T  42332059 atttttggtggataaaatgttattttgatatttaagacaatttgtatgtgagacaaaaagttgtg 42332123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 3359970 - 3359911
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattatttt 97  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| ||||||| | ||||||    
T  3359970 ttttatgatattgaataattttttgtcttatactatttttggtcgacaaaaaactatttt 3359911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 44668786 - 44668865
Alignment:
Q  51 aataattttttgtcttatacgatttttgg-tggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaa 129  Q
    ||||||||||| ||||||||||||||||| | |||||||   |||||||||||||| || |||||||||||| |||||||    
T  44668786 aataattttttatcttatacgatttttggatcgacaaaaagctattttggtatttttgaaaatttgtatgtgagacaaaa 44668865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 37966929 - 37967110
Alignment:
Q  27 acatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgaca 126  Q
    |||| |||| |||||||| | || ||||||||||||| |||||||||||||   |||| |||   ||||||||  ||||||| || ||||| |||  |||    
T  37966929 acataacaaatttttatggtattaaataattttttgttttatacgatttttttgggacgaaatgctattttggatttttagataacttgtacgtggaaca 37967028  T
Q  127 aaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||  ||| | ||||||  |||||||||    |||||||||   ||| ||||||| |||||||||||| ||||||    
T  37967029 aaaagttgtgatgtggtctagtgaaagacaaaaatatgggtttttgtcttgtcccttgcatccaatttgtcatgtacctgaa 37967110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 8083847 - 8083785
Alignment:
Q  52 ataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    |||||||||||||||||||||||||  ||||| |||||| |||||||  ||||||||||||||||||    
T  8083847 ataattttttgtcttatacgatttt--gtggataaaagactattttg--attttagacaatttgtat 8083785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 21408419 - 21408331
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||| |||||||||||| ||||||| |||||||||| || |||| |||||||| |||| || || ||  |||||||| |||||    
T  21408419 ttgaataattctttgtcttatacaatttttgatggacaaaaggttcttttcgtattttaaacaacttatacgtaggacaaaaaattgtg 21408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 26910485 - 26910369
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaa 191  Q
    |||||| ||||||| ||||| ||||| ||||||||||||||||||  ||| ||| | ||||||||||||||  ||||||| |||  ||| |||| || |     
T  26910485 tatttttgtatttttgacaacttgtacgtgtgacaaaaagttgtgttgtggtttggcgagggacaaaaattgcagtttttatcctgtcccttgcctccag 26910386  T
Q  192 tttgtcatgtccctgaa 208  Q
    |||| | ||||||||||    
T  26910385 tttgccctgtccctgaa 26910369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 29455992 - 29455880
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||| ||||  ||||||| | ||||||||| ||| |||||||| |||||| |||||||||||   ||||||||||||||  | || | ||||||    
T  29455992 aacaacacatgacaaacttttatggtattgaataatatttggtcttatatgatttt-ggtggacaaaacgctattttggtatttt--ataactagtatgt 29455896  T
Q  121 gtgacaaaaagttgtg 136  Q
    | ||||||||||||||    
T  29455895 gggacaaaaagttgtg 29455880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 174
Target Start/End: Original strand, 35645413 - 35645548
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||| |||||  | ||||||| |||||||||||||| | || | ||| || ||||||  |||||||||||| ||||| ||  || |||||||||||     
T  35645413 ttttatggtgttgggtcattttttatcttatacgattttggatgaaaaaatgactattttattattttagacaacttgtacgtacgataaaaagttgtgt 35645512  T
Q  138 agtgatttagtgagggacaaaaattctagtttttgtc 174  Q
     ||| ||||||||||||| | ||||| ||||||||||    
T  35645513 tgtggtttagtgagggacgagaattc-agtttttgtc 35645548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 38360041 - 38360129
Alignment:
Q  42 atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    ||||| ||||||||||||| ||  ||||  ||||||| ||||||||| |||||||| |||||||| |||| ||||| ||| ||||||||    
T  38360041 atgatattgaataatttttggttctatataatttttgttggacaaaatattatttttgtattttaaacaacttgtaggtgagacaaaaa 38360129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 42073090 - 42072995
Alignment:
Q  75 tttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttt 170  Q
    ||||||||| |||| |||||||| ||||||||||||| |||||| ||  ||||||| ||||||  | ||||| ||||  ||||||||| |||||||    
T  42073090 tttggtggataaaatattatttttgtattttagacaacttgtatttgaaacaaaaaattgtgctataatttaatgagaaacaaaaattttagtttt 42072995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 21408744 - 21408635
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||| ||||||||||||||| |||||| ||| | |||||| |||||||||| || |||||  ||  | |||||||| ||  ||| ||||     
T  21408744 ttgaataattttttatcttatacgatttttagtggacgaaa-actatttttgtattttagataacttgtacatgaaataaaaagttatgttgtggtttaa 21408646  T
Q  148 tgagggacaaa 158  Q
    |||||||||||    
T  21408645 tgagggacaaa 21408635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 161
Target Start/End: Original strand, 11250587 - 11250706
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | |||| ||||||||||| ||||| ||||||||  ||||||||   || |||||||||||||||||      | || ||||||||||||||    
T  11250587 tttttatggtattgagtaattttttgttttatatgatttttgagggacaaaatgctagtttggtattttagacaa-----ctatgggacaaaaagttgtg 11250681  T
Q  137 cagtgatttagtgagggacaaaaat 161  Q
      ||| ||| |||||||||||||||    
T  11250682 ttgtggtttggtgagggacaaaaat 11250706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 45063678 - 45063622
Alignment:
Q  55 attttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaa 111  Q
    ||||||| ||||||| ||| |||| |||| |||| ||||||||||||||||||||||    
T  45063678 attttttatcttatatgatctttgatggaaaaaaaattattttggtattttagacaa 45063622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 16963092 - 16963147
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaa 111  Q
    |||||||| ||||||||||||||  ||||||||   ||||||||||||||||||||    
T  16963092 ttttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaa 16963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 22724179 - 22724024
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  | || |||||||| | |||||||||||| ||| ||||| |||||||||  ||| |||   |||||| |||||||| |||| ||||| |    
T  22724179 gaacaacacaagataaatttttatggtattgaataattttctgtattatatgatttttgggtgacgaaatgctatttttgtattttatacaacttgtacg 22724080  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    || || ||||||||| |  ||| ||| | || ||||||| |||  |||||||||||    
T  22724079 tgggataaaaagttgcgttgtggtttggcgatggacaaacattgcagtttttgtcc 22724024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 7958634 - 7958715
Alignment:
Q  80 tggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
    ||||||||| | |||||||||||||||||||| |||||  |  ||||||||||| |||  ||| |||||||| ||||||||||    
T  7958634 tggacaaaaaactattttggtattttagacaacttgtacttcagacaaaaagttatgctatga-ttagtgagtgacaaaaatt 7958715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 12098489 - 12098381
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||||| ||||||||| |||  ||||||| || |||||| || |||||  || |||| ||||||||||||| | |||  || ||||||||||| ||     
T  12098489 ttttatgatattgaataatctttgatcttataagaattttggagggcaaaatgttgtttttgtattttagacaactcgtagttgagacaaaaagttatgt 12098390  T
Q  138 agtgattta 146  Q
     ||||||||    
T  12098389 tgtgattta 12098381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 16963174 - 16963274
Alignment:
Q  108 acaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctga 207  Q
    |||| ||||| ||| |||||||||||||   ||| |||  | ||||||||||||   ||||||||||| |||| |||| |||| |||||||||| |||||    
T  16963174 acaacttgtacgtgggacaaaaagttgtattgtggtttgataagggacaaaaatatgagtttttgtcctatcccttgcctctagtttgtcatgtacctga 16963273  T
Q  208 a 208  Q
    |    
T  16963274 a 16963274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 18178 - 18018
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  18178 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 18079  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || |||||||||||| ||||||    
T  18078 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcatgtacctgaa 18018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 12660 - 12533
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  12660 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 12561  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  12560 tgagggacaaaaatatgagtttttgtcc 12533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 10324268 - 10324108
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||| | ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  10324268 ttgagtaattttttgttttatacgattttttggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgg 10324169  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| |||| |||||| ||| ||||||    
T  10324168 tgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaa 10324108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 7396306 - 7396127
Alignment:
Q  22 acaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtg 121  Q
    ||||||||| |||| |||||||| | ||||||||||||  |||| |||| ||||||| ||||||||| | |||||| |||||||||| || ||||| |||    
T  7396306 acaacacatgacaaatttttatggtattgaataatttt--gtctcataccatttttgatggacaaaacactatttttgtattttagataacttgtacgtg 7396209  T
Q  122 tgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccc 204  Q
     |||||||||||||| |||| ||||||||||||||| | |||| ||||||||||  |||||||| || |  ||||||||||||    
T  7396208 agacaaaaagttgtgtagtggtttagtgagggacaagatttct-gtttttgtcctgtccattgcttccagcttgtcatgtccc 7396127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 10485102 - 10485256
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||  |||| | |||||||  |||||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| ||    
T  10485102 aacaacacaggacaaatatttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgt 10485201  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    | ||||||||||||||| ||| |||  ||||||||||||||   |||||||||||    
T  10485202 gggacaaaaagttgtgctgtggtttgctgagggacaaaaatatcagtttttgtcc 10485256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 32410020 - 32409882
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||||||||||||||| ||||||||||||||  |||||||| | |||||||||||||||||||| ||||  ||| ||||||||||||||    
T  32410020 tttttatgacattgaataattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtgagtgggacaaaaagttgtg 32409921  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
      ||| ||| |||||||||||||||   |||||||||||    
T  32409920 atgtggtttggtgagggacaaaaatatgagtttttgtcc 32409882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 2614839 - 2615028
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| |||   |||| ||||||||| | ||||||||||||||  ||||||||   |||||||||||||||||||| |||||     
T  2614839 gaacaacacatgacaaattttttatggcattgagtaattttttattttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtac 2614938  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||| ||||||||||||||| ||| ||| |||||||||||||||   |||||||||||  ||| |||| || |||||||| ||| ||||||    
T  2614939 gtgggacaaaaagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaa 2615028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 17443234 - 17443394
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||| ||| ||||||||||||||| |||| |||   |||||||||||||||||||| ||||| ||| ||||||||||||| | ||| ||| |    
T  17443234 ttgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttgg 17443333  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||| ||||||   |||||||||||  ||| ||||||||| |||||| ||| ||||||    
T  17443334 tgagggataaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtacctgaa 17443394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 3932964 - 3932837
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  3932964 ttgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttgg 3932865  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    |||| |||||||||   |||||||||||    
T  3932864 tgagagacaaaaatatgagtttttgtcc 3932837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 17867807 - 17867920
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||      
T  17867807 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggtttga 17867906  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  17867907 tgagggacaaaaat 17867920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 17877590 - 17877703
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||      
T  17877590 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgggacaaaaagttgtgctgtggtttga 17877689  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  17877690 tgagggacaaaaat 17877703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 161
Target Start/End: Original strand, 24242625 - 24242749
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  24242625 tttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 24242724  T
Q  137 cagtgatttagtgagggacaaaaat 161  Q
      ||| ||| |||||||||||||||    
T  24242725 atgtggtttggtgagggacaaaaat 24242749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 10959944 - 10960099
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| |||| ||||||||   |||||| || |||||| ||||||||||||||| ||||||||   |||||| ||||||||||||| ||||| |    
T  10959944 gaacaacacatgacaaatttttatggcattgaatgatattttgttttatacgatttttgggggacaaaatgctatttttgtattttagacaacttgtacg 10960043  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    || ||||||||||||||  ||| |||  ||||||||||||||   |||||||||||    
T  10960044 tgggacaaaaagttgtgttgtggtttgttgagggacaaaaatatgagtttttgtcc 10960099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 11613948 - 11613821
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||||||||||| |||| ||||| ||| ||||||||||||||| ||| ||| |    
T  11613948 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttatacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 11613849  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  11613848 tgagggacaaaaatatgagtttttgtcc 11613821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 29054319 - 29054488
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||| | |||||||||||| ||| ||||| |||||||||  ||| |||  |||||||| |||||||||||| ||||| ||| |||||||||||||||    
T  29054319 ttttatggtattgaataattttctgtattatatgatttttgggtgacgaaatgttattttg-tattttagacaacttgtacgtgagacaaaaagttgtgc 29054417  T
Q  138 agtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     ||| ||| | |||||||||||||| |||||||||||   ||| |||| || |||||||| ||| ||||||    
T  29054418 tgtggtttggcgagggacaaaaattgtagtttttgtcatgtcccttgcttccaatttgtcctgttcctgaa 29054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 34176802 - 34176928
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||| | ||||| ||| ||||||||||||||| ||||||| |    
T  34176802 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagactacttgtacgtgggacaaaaagttgtgctgtgatttgg 34176901  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    |||| |||||||||   ||||||||||    
T  34176902 tgagagacaaaaatatgagtttttgtc 34176928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 18057491 - 18057644
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||| ||| ||||||||||||| | |||| |||   |||||||||||||||||||| ||||| ||| ||||||||||||| | ||| ||| |    
T  18057491 ttgaataattttatgttttatacgatttttagaggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttgg 18057590  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgt 201  Q
    ||||||||||||||   ||||||||||   ||| || |||||| ||||||||||    
T  18057591 tgagggacaaaaatatgagtttttgtcatgtcccttacatctagtttgtcatgt 18057644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 14925613 - 14925453
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||| ||| ||||||||||||| | ||||  ||   |||||||||||||||||||| ||||| ||| ||||||||||||| | ||| ||| |    
T  14925613 ttgaataattttatgttttatacgatttttaggggacggaatgctattttggtattttagacaacttgtaagtgggacaaaaagttgtactgtggtttgg 14925514  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| || |||||| |||||| ||| ||||||    
T  14925513 tgagggacaaaaatatgagtttttgtcctgtcccttacatctagtttgtcctgtacctgaa 14925453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 3259655 - 3259782
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| || |||||||||||  ||| ||| |    
T  3259655 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggtttgg 3259754  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  3259755 tgagggacaaaaatatgagtttttgtcc 3259782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 24203335 - 24203461
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||| |||||  | ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  24203335 ttgagtaattttttgttttatacaattttgag-ggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 24203433  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  24203434 tgagggacaaaaatatgagtttttgtcc 24203461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 7365348 - 7365446
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgt 135  Q
    |||||||| | || |||||||||| ||||||||| |||||| | ||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||    
T  7365348 tttttatggtattaaataatttttagtcttataccattttttgcggacaaatgactattttgatattttagacaatttttatgtgtgacaaaaagttgt 7365446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 9902798 - 9902688
Alignment:
Q  65 ttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattct 164  Q
    ||||| ||||||||| |||| |||  ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||| |||| ||||||||||||||       
T  9902798 ttatatgatttttgggggacgaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttaatgagggacaaaaatatc 9902699  T
Q  165 agtttttgtcc 175  Q
    |||||||||||    
T  9902698 agtttttgtcc 9902688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 31870285 - 31870144
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| |||| ||||||||   |||||||||||||||| |||||||| |||||| |||| |||   |||||| |||||||||||||  | || |    
T  31870285 gaacaacacatgacaaatttttatggcattgaataattttttgttttatacgagttttgggggacgaaatgctatttttgtattttagacaacctatacg 31870186  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    || ||||||||||||||  ||| ||| |||||||||||||||    
T  31870185 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 31870144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 11279100 - 11279227
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||| |||||||||  ||| ||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  11279100 ttgagtaattttttgttttattcgatttttgagggataaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgg 11279199  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  11279200 tgagggacaaaaatatgagtttttgtcc 11279227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 15277437 - 15277310
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| |||||| |||| |||||||||||||||  |||||||   |||||||||||||||||||| ||||| ||| || |||||||||||  ||| ||| |    
T  15277437 ttgagtaatttgttgttttatacgatttttggaagacaaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgatgtggtttgg 15277338  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  15277337 tgagggacaaaaatatgagtttttgtcc 15277310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 32132537 - 32132410
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| |||||| |||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| ||| ||||||||||||||  |||  || |    
T  32132537 ttgagtaatttgttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtgttgtggattgg 32132438  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  32132437 tgagggacaaaaatatgagtttttgtcc 32132410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 208
Target Start/End: Original strand, 11382040 - 11382194
Alignment:
Q  52 ataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgag 151  Q
    |||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| ||||     
T  11382040 ataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtga- 11382138  T
Q  152 ggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     |||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  11382139 -gacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 11382194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 34684136 - 34684027
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggta-ttttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgag 151  Q
    ||||||||||| ||||||||||||||| ||||||||   |||||||||| |||||||||| ||||| |||  |||||||||||||  ||| ||| |||||    
T  34684136 taattttttgttttatacgatttttggaggacaaaatgctattttggtatttttagacaacttgtacgtggaacaaaaagttgtgttgtggtttggtgag 34684037  T
Q  152 ggacaaaaat 161  Q
    ||||||||||    
T  34684036 ggacaaaaat 34684027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 167091 - 166967
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||| ||||||||||| ||||| |||||||   |||| |||   |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  167091 tttttatgacattgagtaattttttgttttatatgatttttaagggacgaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 166992  T
Q  137 cagtgatttagtgagggacaaaaat 161  Q
      ||| ||| |||||||||||||||    
T  166991 ttgtggtttggtgagggacaaaaat 166967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 3379690 - 3379808
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||| ||||||||| |||| |||   ||||||||||||| |||||| ||||||||| |||||||||||||||  || ||| ||||| |||    
T  3379690 ttttttgttttatatgatttttggaggacgaaatgctattttggtatttaagacaacttgtatgtgagacaaaaagttgtgctatggtttggtgagcgac 3379789  T
Q  156 aaaaattctagtttttgtc 174  Q
    ||||||   ||||||||||    
T  3379790 aaaaatatcagtttttgtc 3379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 18597343 - 18597201
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| | || |||||||| | |||||||||||||||| ||||| ||||||||  |||| ||  | |||||| |  |||||||||| || || |    
T  18597343 gaacaacacataataaatttttatggtattgaataattttttgttttatatgatttttgagggacgaagtactattttagcgttttagacaacttatacg 18597244  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
    || ||||||||||||||  ||| ||| ||||||||||||||||    
T  18597243 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaatt 18597201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 8178030 - 8177925
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||| ||||||||| |||| |||  ||||||||||||||||||||| ||| | ||| ||||||||||||||  ||| ||| || ||||||    
T  8178030 ttttttgttttatatgatttttgggggacgaaatgttattttggtattttagacaacttgaacgtgggacaaaaagttgtgttgtggtttggtaagggac 8177931  T
Q  156 aaaaat 161  Q
    ||||||    
T  8177930 aaaaat 8177925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 15277094 - 15276934
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||   ||||||| | |||||||||| ||||| ||| || |||||||||||  ||| ||| |    
T  15277094 ttgagtaattttttgttttataagatttttgagggacaaaatgctattttgttcttttagacaacttgtacgtgggaaaaaaagttgtgatgtggtttgg 15276995  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  15276994 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 15276934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 208
Target Start/End: Original strand, 32860007 - 32860183
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | |||||||||||| ||| ||||  |||||||||  ||| |||  ||||||| |||||||||| || ||||| ||| ||||||| |    
T  32860007 acaaatttttatggtattgaataattttctgtattatttgatttttgggtgacgaaatgttatttttgtattttagaaaacttgtacgtgagacaaaagg 32860106  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||| ||| ||| | || |||||||||||  || |||||||   ||| |||| || | |||||||||||||||||    
T  32860107 ttgtgctgtggtttggcgatggacaaaaattgcagcttttgtcatgtcccttgcctccagtttgtcatgtccctgaa 32860183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 159
Target Start/End: Original strand, 11212229 - 11212340
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||| |||||||||  ||||||||  ||||||||||||||||||||| ||| | ||| ||||||| ||| ||  ||| ||| |    
T  11212229 ttgagtaattttttgttttattcgatttttgagggacaaaatgttattttggtattttagacaacttgcacgtgagacaaaaggttatgttgtggtttgg 11212328  T
Q  148 tgagggacaaaa 159  Q
    ||||||||||||    
T  11212329 tgagggacaaaa 11212340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 16542432 - 16542309
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||| |||||||| ||||||| || | ||||| ||||||||||||||||||||| |||||  ||  | ||||| ||||  |||||||| |    
T  16542432 ttgaataattttttatcttatacaatttttgttgcataaaaggttattttggtattttagacaacttgtacttgaaataaaaatttgtatagtgattttg 16542333  T
Q  148 tgagggacaaaaattctagttttt 171  Q
    |||| ||||| |||| || |||||    
T  16542332 tgagagacaagaattttaattttt 16542309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 4494248 - 4494159
Alignment:
Q  72 atttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||| | ||||||||  |||||| |||||||||||||| ||||| ||| ||||||||||||| | ||| ||| |||||||||||||||    
T  4494248 attttttggggacaaaatgttatttcggtattttagacaacttgtacgtgggacaaaaagttgtactgtggtttggtgagggacaaaaat 4494159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 29424734 - 29424655
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    ||||||| | ||||||||||||| ||||| |||| |||||||||||||||| | |||||| |||||||||| || |||||    
T  29424734 ttttatggtattgaataatttttggtcttgtacgttttttggtggacaaaaaactatttttgtattttagataacttgta 29424655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 8844422 - 8844488
Alignment:
Q  51 aataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgta 117  Q
    ||||||| |||||||||||| || |||||||||||||||| |||||| |||| |||||||| |||||    
T  8844422 aataattgtttgtcttatactatgtttggtggacaaaagactattttagtatcttagacaacttgta 8844488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 9613944 - 9614034
Alignment:
Q  46 tgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||||||||| || ||||| |||| || ||||||| ||||||||||| ||||||||||||| || || |||  ||||||| |||||    
T  9613944 tgttgaataatttttggtgttatatgattatttgtggacagaagattattttagtattttagacaacttatacgtggaacaaaaaattgtg 9614034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 27756249 - 27756375
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    |||||||||| ||||| ||  ||| || ||||||||| ||| ||||| |||||| ||| ||||| ||||  |||||||| |||||||||||| || || |    
T  27756249 gaacaacacaacacaatttgctataatattgaataatctttggtcttgtacgatatttagtggataaaatgttattttgatattttagacaacttatacg 27756348  T
Q  120 tgtgacaaaaagttgtgcagtgattta 146  Q
     | ||||||||||||||  ||||||||    
T  27756349 ggggacaaaaagttgtgttgtgattta 27756375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 27824836 - 27824698
Alignment:
Q  19 ggaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||| |||| ||||  ||||||| | |||||||||||||  ||||||| |||||||| |||||||||   |||||| ||||||| || || | |||     
T  27824836 ggaacaatacatgacaaacttttatggtattgaataatttttgatcttatatgatttttgttggacaaaaagctatttttgtattttggataactcgtac 27824737  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaa 157  Q
    ||| ||||||||||||||  ||| | || ||||||||||    
T  27824736 gtgggacaaaaagttgtgatgtggtataatgagggacaa 27824698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 35004313 - 35004159
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||| ||||  ||||||||| ||||||| ||||| || |||||| ||||||  | |||||||   ||||||| ||||||||| || ||||| |    
T  35004313 gaacaacacataacaaacttttatgatattgaatagtttttggtattatacaattttttattgacaaaaatctattttgatattttagaaaacttgtacg 35004214  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    || |||||| |||||||  ||| ||   |||| |||||||| | |||||||||||    
T  35004213 tgggacaaagagttgtgttgtggttatatgagagacaaaaaatttagtttttgtc 35004159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 3290635 - 3290769
Alignment:
Q  39 tttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgca 138  Q
    |||||||  |||||||||| ||||| ||||| ||||||||  ||||||||   |||||||||||||||||||| || || ||| |  |||||||||||      
T  3290635 tttatgacattgaataattgtttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttatacgtggg--aaaaagttgtgtt 3290732  T
Q  139 gtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    ||| ||| || ||||||||||||   |||||||||||    
T  3290733 gtggtttggtaagggacaaaaatatgagtttttgtcc 3290769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 5650888 - 5650735
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    ||||||| || |||| ||||| || | |||||| |||| |  |||| ||| |||| ||||||||||||   || |||||||||||   |||||| |||||    
T  5650888 aacaacaaatgacaaatttttgtggtattgaatgatttctgatcttgtacaatttgtggtggacaaaaagctactttggtattttgcgcaatttatatgt 5650789  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    | ||| ||| |||||||  ||||||||||||| |||||||||  ||||||||||    
T  5650788 gagaccaaatgttgtgctatgatttagtgaggaacaaaaatttcagtttttgtc 5650735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 14808157 - 14808045
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||||||| || ||||||||||||||| |||  |||  |||||||||||  ||||||||  | || ||| ||||||||||||||  ||| ||| |    
T  14808157 ttgaataatttttagttttatacgatttttgggggatgaaatgttattttggta-cttagacaacctatacgtgggacaaaaagttgtgttgtggtttgg 14808059  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  14808058 tgagggacaaaaat 14808045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 32614091 - 32614035
Alignment:
Q  52 ataattttttgtcttatacgatttttggtggacaaaagattattttggtattttaga 108  Q
    ||||||||| |||||||||||||||||||||||||||  |||||||  |||||||||    
T  32614091 ataatttttggtcttatacgatttttggtggacaaaaagttatttttatattttaga 32614035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 136
Target Start/End: Complemental strand, 15400736 - 15400654
Alignment:
Q  54 aattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||||| |||| || | || ||||||||||| ||||||| ||||||| ||||||||||  |  ||||||||||||||    
T  15400736 aattttttgtctcatacaatgtatgatggacaaaagactattttgatattttaaacaatttgtacttaagacaaaaagttgtg 15400654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 136
Target Start/End: Complemental strand, 15412523 - 15412441
Alignment:
Q  54 aattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||||| |||| || | || ||||||||||| ||||||| ||||||| ||||||||||  |  ||||||||||||||    
T  15412523 aattttttgtctcatacaatgtatgatggacaaaagactattttgatattttaaacaatttgtacttaagacaaaaagttgtg 15412441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 136
Target Start/End: Complemental strand, 15428117 - 15428035
Alignment:
Q  54 aattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||||| |||| || | || ||||||||||| ||||||| ||||||| ||||||||||  |  ||||||||||||||    
T  15428117 aattttttgtctcatacaatgtatgatggacaaaagactattttgatattttaaacaatttgtacttaagacaaaaagttgtg 15428035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 10552749 - 10552789
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaa 88  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  10552749 ttgaataatttttgatcttatacgatttttggtggacaaaa 10552789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 13412644 - 13412710
Alignment:
Q  22 acaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaa 88  Q
    ||||||||| |||| |||||||  | |||||||||||||  ||||||| ||||||| ||||||||||    
T  13412644 acaacacatgacaaatttttatagtattgaataatttttcatcttatatgattttttgtggacaaaa 13412710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 29203104 - 29203043
Alignment:
Q  27 acatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaa 88  Q
    |||| |||| |||||||||| ||||| |||| ||||||||||| || |||| ||||||||||    
T  29203104 acatgacaaatttttatgatattgaacaattatttgtcttatatgaatttttgtggacaaaa 29203043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 6209049 - 6208981
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgt 116  Q
    ||||| ||| ||||||||| |||||| ||| |||||||| | |  |||||| |||||||||||||||||    
T  6209049 ttgaacaatgttttgtcttgtacgatgtttagtggacaatataccattttgatattttagacaatttgt 6208981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 8570313 - 8570257
Alignment:
Q  80 tggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||||| ||||||| ||| || ||||||||||   |||||||||||||||||    
T  8570313 tggacaaaagactattttgatatgttggacaatttgttcttgtgacaaaaagttgtg 8570257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 28068787 - 28068868
Alignment:
Q  52 ataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgt 135  Q
    ||||||||| ||||||||| | ||||||||||||||  | ||||||||||||||| || | ||||| ||  |||||||| ||||    
T  28068787 ataatttttggtcttataccacttttggtggacaaa--actattttggtattttataccacttgtacgtaagacaaaaaattgt 28068868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 2473 - 2302
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||| ||||||||||| ||||| |||||||   |||||||| | |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  2473 tttttatgacattgagtaattttttgttttataggatttttatgggacaaaaaactattttggtattttagacaacttgtacgtgggacaaaaagttgtg 2374  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    | ||| ||| |||||||||||||||   |||||||||||  ||| |||| || |||||||| ||| ||||||    
T  2373 ctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaa 2302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 208
Target Start/End: Original strand, 3964255 - 3964421
Alignment:
Q  41 tatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagt 140  Q
    |||||| |||||||||||| ||| ||||| ||||||||| |||| |||   |||||||||||||||||||| |||||  || ||||||||||||||| ||    
T  3964255 tatgatattgaataattttatgttttatatgatttttgg-ggacgaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgctgt 3964353  T
Q  141 gatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    | ||| ||||||||||||||||  |||||||||||| | | |||| || |||||||||||||| ||||    
T  3964354 ggtttggtgagggacaaaaatttcagtttttgtccagttccttgcctccaatttgtcatgtccatgaa 3964421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 31883162 - 31883008
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  |||| |||||||||  |||||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| |    
T  31883162 gaacaacacaggacaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacg 31883063  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    || ||||||||||||||| ||| |||  ||||| ||||||||   ||||||||||    
T  31883062 tgggacaaaaagttgtgctgtggtttgctgaggcacaaaaatatcagtttttgtc 31883008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 3867788 - 3867647
Alignment:
Q  21 aacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgt 120  Q
    |||||||||| ||||||||||||| | ||||||||||| |||| ||||| ||||||||| ||||||||   ||||||||| ||||||| || ||||| ||    
T  3867788 aacaacacatgacaagtttttatggtattgaataatttcttgttttatatgatttttgggggacaaaatgctattttggtgttttagaaaacttgtacgt 3867689  T
Q  121 gtgacaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
      ||||||||||||||| ||| ||| ||||||||||||||||    
T  3867688 aggacaaaaagttgtgctgtggtttggtgagggacaaaaatt 3867647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 185
Target Start/End: Complemental strand, 53557907 - 53557770
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||| |    
T  53557907 ttgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgcagtggtttgg 53557808  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgc 185  Q
    |||||||||||| |   |||||||||||  ||||||||    
T  53557807 tgagggacaaaactatgagtttttgtcctgtccattgc 53557770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 28675763 - 28675923
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  28675763 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 28675862  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   ||||||||||| |||| |||| || | |||||| ||| ||||||    
T  28675863 tgagggacaaaaatatgagtttttgtcctatcccttgcctccagtttgtcctgtacctgaa 28675923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 39052950 - 39052790
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| |||||| |||| ||||||||||||||| ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  39052950 ttgagtaatttgttgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 39052851  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||| |||||||||   |||||||||||  |||||||| || | |||||| ||| ||||||    
T  39052850 tgagagacaaaaatatgagtttttgtcctgtccattgcctccagtttgtcctgtgcctgaa 39052790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 51925348 - 51925160
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||| ||||| |||| ||||||||   |||||||||||||||| ||||||||||||||| |||| |||  |||||||||||||  | |||| ||||| |    
T  51925348 gaacagcacatgacaaatttttatggcattgaataattttttgttttatacgatttttgggggacgaaatgttattttggtattaaaaacaacttgtacg 51925249  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    || ||||||||||||||  ||| ||| |||||||||||||||   |||||||||||  ||| |||| || | |||||||||| ||||||    
T  51925248 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcatgtacctgaa 51925160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 20609771 - 20609633
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||| |||||||||||  |||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  20609771 tttttatgacattgagtaattttttgttatatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtg 20609672  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    | ||| ||| |||||||||||||||   |||||||||||    
T  20609671 ctgtggtttggtgagggacaaaaatatgagtttttgtcc 20609633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 1344819 - 1344706
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  1344819 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgg 1344720  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  1344719 tgagggacaaaaat 1344706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 2135043 - 2135203
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  |||||||    ||||||||||||||||| |||||||| ||| ||||||||||||||| ||| ||| |    
T  2135043 ttgagtaattttttgttttatacgatttttgagggacaaagtgctattttggtattttagataatttgtacgtgggacaaaaagttgtgctgtggtttgg 2135142  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   ||||||||| |  ||| |||| |||| |||||| ||| ||||||    
T  2135143 tgagggacaaaaatatgagtttttgttctgtcccttgcctctagtttgtcctgtacctgaa 2135203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 8648659 - 8648543
Alignment:
Q  58 ttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaa 157  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||  ||  |||||| ||| ||||    
T  8648659 ttttgtcatatatgatgtttggtggacaaaagattattttggtattttagacaatttgtacttgtgacaaaaagttgtgatgtagtttagttaggaacaa 8648560  T
Q  158 aaattctagtttttgtc 174  Q
     ||||  ||||||||||    
T  8648559 gaatttcagtttttgtc 8648543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 34351480 - 34351320
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||||| | ||||| |||||||||| ||||| ||||  |||||||| |||||||||||| ||||||||| ||||||||||||||  ||| |||      
T  34351480 ttgaataatttatggtcttgtacgattttttgtggataaaatgttattttgatattttagacaacttgtatgtgcgacaaaaagttgtgttgtggtttga 34351381  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||||||| |||| | |||||||||   || ||| | |||| |||||||||||||||||    
T  34351380 tgagggacaataatttttgtttttgtcgtgtctatttcctctagtttgtcatgtccctgaa 34351320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 42636510 - 42636402
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||| ||||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| ||||||    
T  42636510 taattttttgttttaaacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagg 42636411  T
Q  153 gacaaaaat 161  Q
    |||||||||    
T  42636410 gacaaaaat 42636402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 44116912 - 44117072
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||| ||||||||||||| ||||| ||| ||||||||||||||||||| |||      
T  44116912 ttgagtaattttttgttttatacgatttttgagggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgcagtggtttga 44117011  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  44117012 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 44117072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 51259892 - 51259732
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| |||||||   ||||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  51259892 ttgagtaattttttgttttatatgatttttaagggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttgg 51259793  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  51259792 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 51259732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 33364906 - 33364763
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||||| ||| |||||||||    
T  33364906 acaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgagacaaaaag 33364807  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |||||  ||| |||  |||||| |||||||   |||||||||||    
T  33364806 ttgtgatgtggtttgctgaggggcaaaaatatcagtttttgtcc 33364763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 47958544 - 47958417
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||| ||  ||| |    
T  47958544 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttgg 47958445  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  47958444 tgagggacaaaaatatgagtttttgtcc 47958417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 38213332 - 38213454
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||| ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |||||     
T  38213332 taattttttgttttatacgatttttgggggacaaaatggtattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttcgtgagt 38213431  T
Q  153 gacaaaaattctagtttttgtcc 175  Q
    |||||||||   |||||||||||    
T  38213432 gacaaaaatatgagtttttgtcc 38213454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 44000224 - 44000346
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||||||||| | |||||| |||||| ||| || ||||| ||| |||||||| |||||     
T  44000224 ttttatggtattgaataatttttggtcttatacgatttttggtggacaaaaaactatttttgtatttcagataacttgtacgtgggacaaaaaattgtga 44000323  T
Q  138 agtgatttagtgagggacaaaaa 160  Q
     ||| |||||||||||| |||||    
T  44000324 tgtggtttagtgagggaaaaaaa 44000346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 49749023 - 49748897
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||| |||| |||  |||||||||||||| | |||| ||||| ||| ||||||||||||||  ||| ||| |    
T  49749023 ttgaataattttttgttttatacgatttttgggggacgaaatgttattttggtatttaaaacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 49748924  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  49748923 tgagggacaaaaatatcagtttttgtc 49748897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 198
Target Start/End: Complemental strand, 54622908 - 54622758
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||| |||| |||   |||||||||||||||||||| ||||| ||| || |||||||||||  ||| ||| |    
T  54622908 ttgaataattttttgttttatacgatttttgggggacgaaatgctattttggtattttagacaacttgtacgtgggataaaaagttgtgttgtggtttcg 54622809  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtca 198  Q
    |||| |||||||||   |||||||||||  ||| |||||| || |||||||    
T  54622808 tgagcgacaaaaatatgagtttttgtcctgtcccttgcatttagtttgtca 54622758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 174
Target Start/End: Original strand, 34026629 - 34026766
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||| | |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| |||||||| |||||    
T  34026629 tttttatggtattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtg 34026728  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
      ||| ||| |||||||||||||||   ||||||||||    
T  34026729 ttgtggtttggtgagggacaaaaatatgagtttttgtc 34026766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 5442264 - 5442376
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||| ||||   ||||||| |||||||||||  ||||| ||| ||||||||||||||| ||||||| |    
T  5442264 ttgaataattttttgttttatacgatttttgagggataaaatgctattttgatattttagacagcttgtacgtgggacaaaaagttgtgctgtgatttgg 5442363  T
Q  148 tgagggacaaaaa 160  Q
    |||||||||||||    
T  5442364 tgagggacaaaaa 5442376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 12349283 - 12349123
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| |||| |||||||||| ||| ||| |    
T  12349283 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacataaagttgtgctgtggtttgg 12349184  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||| |||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  12349183 tgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaa 12349123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 40094447 - 40094603
Alignment:
Q  20 gaacaacacatcacaag-tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| ||||  ||||||||   |||| ||||||||||| |||| |||||||||  ||||||||   ||||||||||||||||||||||||||     
T  40094447 gaacaacacatgacaaaatttttatggcattgagtaattttttgttttatgcgatttttgagggacaaaatgctattttggtattttagacaatttgtac 40094546  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |||  |||||||||||||  ||| ||| |||||||||||||||   |||||||||||    
T  40094547 gtgaaacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcc 40094603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 41695029 - 41694925
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| ||||||||   |||||  ||||||||||||| ||||||||| |||||||||    
T  41695029 acaaatttttatgacattgaataattttttgttttatacgatttttgggggacaaaatgctatttcagtattttagacaacttgtatgtgggacaaaaag 41694930  T
Q  132 ttgtg 136  Q
    |||||    
T  41694929 ttgtg 41694925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 20255018 - 20255144
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||  ||||||||||||||||||||| ||||| ||| ||||| ||||||||| ||| ||| |    
T  20255018 ttgagtaattttttgttttataagatttttgagggacaaaatgttattttggtattttagacaacttgta-gtgggacaagaagttgtgctgtggtttgg 20255116  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  20255117 tgagggacaaaaatatgagtttttgtcc 20255144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 21221472 - 21221345
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||| |||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  21221472 ttgagtaattttttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgg 21221373  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  21221372 tgagggacaaaaatatgagtttttgtcc 21221345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Complemental strand, 26282499 - 26282372
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| || || ||| ||||||||||||||| ||| |||      
T  26282499 ttgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttatacgtgggacaaaaagttgtgctgtggtttga 26282400  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    |||| |||||||||   |||||||||||    
T  26282399 tgagagacaaaaatataagtttttgtcc 26282372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 29584848 - 29584975
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||| | ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  29584848 ttgagtaattttttattttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 29584947  T
Q  148 tgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||||||||   |||||||||||    
T  29584948 tgagggacaaaaatatgagtttttgtcc 29584975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 4851568 - 4851455
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  |||  || |    
T  4851568 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgggttgg 4851469  T
Q  148 tgagggacaaaaat 161  Q
    ||||||||||||||    
T  4851468 tgagggacaaaaat 4851455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 25860528 - 25860407
Alignment:
Q  53 taattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagg 152  Q
    ||||||||||| ||||||||||||||| | ||||||   ||||| |||||||||||||| ||||| ||| ||||||||||||||  ||| ||| ||||||    
T  25860528 taattttttgttttatacgatttttggagaacaaaatgctatttcggtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttggtgagg 25860429  T
Q  153 gacaaaaattctagtttttgtc 174  Q
    |||||||||   ||||||||||    
T  25860428 gacaaaaatatgagtttttgtc 25860407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 29646047 - 29646152
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggac 155  Q
    |||||||| ||||||||||||||| ||||||||   ||||||||||||||| |||| ||||| ||| ||||||||||||||  ||| ||| |||||||||    
T  29646047 ttttttgttttatacgatttttgggggacaaaatgctattttggtattttaaacaacttgtacgtgggacaaaaagttgtgatgtggtttggtgagggac 29646146  T
Q  156 aaaaat 161  Q
    ||||||    
T  29646147 aaaaat 29646152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 3864786 - 3864627
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||| ||||||||| ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  3864786 ttgagtaattttttgttttatatgatttttgg-ggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgg 3864688  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     |||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  3864687 cgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcttgtacctgaa 3864627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 24571254 - 24571414
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| |||||| |||| |||| |||||||||| ||||||||   |||||| ||||||||||||| |||||  || ||||||||||||||| ||| ||| |    
T  24571254 ttgagtaatttgttgttttattcgatttttgggggacaaaatcctatttttgtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttgg 24571353  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  24571354 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaa 24571414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 25927432 - 25927312
Alignment:
Q  55 attttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgaggga 154  Q
    ||||||||| ||||||||||||||  | ||||||  ||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| || |||||    
T  25927432 attttttgttttatacgatttttgaggaacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtgttttggtaaggga 25927333  T
Q  155 caaaaattctagtttttgtcc 175  Q
    |||||||   |||||||||||    
T  25927332 caaaaatatgagtttttgtcc 25927312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 25954408 - 25954549
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||| |||||||||||||| | ||||||| ||||||| |||| |||  |||| || |||||||| |||| || |||||| |||||||||    
T  25954408 acaaatttttatgatattgaataattttttattttatacgctttttgg-ggacgaaatgttatattagtattttaaacaacttatatgtgagacaaaaag 25954506  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||| || |||| ||||| |||||||||   ||||||||||    
T  25954507 ttgtgctgtaatttggtgagagacaaaaatatgagtttttgtc 25954549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 174
Target Start/End: Complemental strand, 14155547 - 14155447
Alignment:
Q  73 tttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttg 172  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||  || ||||||||||||||   ||||||||||||||| |||| ||| ||||||||    
T  14155547 ttttttgtggacaaaagattattttgatattttagacaacttgtacttgagacaaaaagttgtgttatgatttagtgagggataaaatttc-agtttttg 14155449  T
Q  173 tc 174  Q
    ||    
T  14155448 tc 14155447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 19906779 - 19906895
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaa 191  Q
    ||||||||| |||||||||| ||||| ||| ||||||||||||||| ||| ||| ||||||||||||||||  |||||||||||  ||| |||| || |     
T  19906779 tattttggtgttttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgcctccag 19906878  T
Q  192 tttgtcatgtccctgaa 208  Q
    |||||  ||||||||||    
T  19906879 tttgttctgtccctgaa 19906895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 51296544 - 51296714
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||| | |||| ||||||||||| ||||||||||||| | ||||||||   |||||| ||||||||||||| |||||  |  |||||||| |||||     
T  51296544 ttttatggtattgagtaattttttgttttatacgattttttggggacaaaatgctatttttgtattttagacaacttgtacttaggacaaaaaattgtgt 51296643  T
Q  138 agtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
     ||| ||| |||||||||||||||   |||||||||||  ||| |||| || | |||||| ||| ||||||    
T  51296644 tgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaa 51296714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 50386568 - 50386455
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||||||||||||||| |||||| |||||||| | ||||||   ||||||| |||||||||||| ||||| ||  ||||||||||||||| ||| |||      
T  50386568 ttgaataattttttgttttatacaatttttggggaacaaaatgctattttgatattttagacaacttgtacgtaggacaaaaagttgtgctgtggtttgt 50386469  T
Q  148 tgagggacaaaaat 161  Q
    ||||| ||||||||    
T  50386468 tgaggcacaaaaat 50386455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 28625059 - 28624918
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  ||||  ||||||| | |||||||||||||||||||||| |||||||||| ||| ||| || ||||| |||||||||| || || || |    
T  28625059 gaacaacacaagacaaacttttatggtattgaataattttttgtcttataagatttttggtagactaaa-atgatttttgtattttagataacttatacg 28624961  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
    |  |||||||| || ||  ||| |||| |||||||||||||||    
T  28624960 taggacaaaaatttatgttgtgctttaatgagggacaaaaatt 28624918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 32621842 - 32621924
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    ||||||||||||||||  ||||| ||||||| ||||||| | |||||||||||||||||||||| |||||  || ||||||||    
T  32621842 ttgaataattttttgttgtatacaatttttgatggacaacatattattttggtattttagacaacttgtacatgggacaaaaa 32621924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 21373947 - 21374016
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |||||||||||||||    
T  21373947 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaat 21374016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 389396 - 389479
Alignment:
Q  27 acatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaa 111  Q
    |||||||||  ||||||||||||||| | ||||||||| || |||||||| | |||| |||||| ||||||||||||||||||||    
T  389396 acatcacaaacttttatgatgttgaaca-ttttttgtcctacacgattttggatggataaaagactattttggtattttagacaa 389479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 3695404 - 3695316
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||| |||||| |||| |||||| |||||||| ||| |||| | |||||||||||||||||||| ||||| ||| ||||||| ||||||    
T  3695404 ttgagtaatttgttgttttatacaatttttgggggataaaatactattttggtattttagacaacttgtacgtgggacaaaaggttgtg 3695316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 10747174 - 10747266
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgattttt-ggtggacaaaagattattttggtattttagacaatttgtatgtgtg 123  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||| || ||||||||   ||||||| |||||||||||| ||||| |||||    
T  10747174 acaaatttttatgacattgaataattttttgttttatacgatttttggggggacaaaatgctattttgatattttagacaacttgtacgtgtg 10747266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 50678815 - 50678898
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| ||||| |||||||||   |||||||||||    
T  50678815 tattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagagacaaaaatatcagtttttgtcc 50678898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 44267718 - 44267800
Alignment:
Q  51 aataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagtt 133  Q
    ||||||||||||| ||||| |||||||||  ||| |||   |||||| ||||||||||||||||||||||| || ||||||||    
T  44267718 aataattttttgttttatatgatttttggatgacgaaatgctatttttgtattttagacaatttgtatgtgggataaaaagtt 44267800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 162
Target Start/End: Original strand, 49107135 - 49107273
Alignment:
Q  24 aacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtg 123  Q
    ||||||| ||||  || |||||| | ||| ||||||||||||||||| || |||||||||   |||| ||||||||||||||| ||||||||||   ||     
T  49107135 aacacatgacaaacttatatgatatcgaacaattttttgtcttatactatgtttggtggatccaagactattttggtattttaaacaatttgtagtagta 49107234  T
Q  124 acaaaaagttgtgcagtgatttagtgagggacaaaaatt 162  Q
    |||||||||| ||  ||| |||||||  |||||| ||||    
T  49107235 acaaaaagttatgatgtggtttagtggtggacaagaatt 49107273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 25395577 - 25395650
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaa 111  Q
    ||||||||  ||| || ||||||||| ||||||||||||| ||| ||||||  |||||||||||||||||||||    
T  25395577 ttttatgacattgcattattttttgttttatacgatttttagtgaacaaaatgttattttggtattttagacaa 25395650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 162
Target Start/End: Complemental strand, 8067179 - 8067055
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||| | |||||| ||||||  ||||||| ||||| | ||||||||||   ||||||| ||||||| | || ||||| ||||||||||||||||| |    
T  8067179 ttttatggtattgaatgatttttgatcttatatgatttctagtggacaaaaagctattttgatattttatataacttgtacgtgtgacaaaaagttgtac 8067080  T
Q  138 agtgatttagtgagggacaaaaatt 162  Q
      |||||| |||| ||||| |||||    
T  8067079 tatgattttgtgaaggacacaaatt 8067055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 16145961 - 16145873
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttaga 108  Q
    ||||||||||| |||| | |||||| | |||||||| ||||  |||| || |||||||||||||||||| | |||||| ||||||||||    
T  16145961 gaacaacacatgacaaatatttatggttttgaataagttttgttcttgtatgatttttggtggacaaaaaactatttttgtattttaga 16145873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 22484871 - 22484695
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | |||||||||||| ||| |||||  ||||||||  ||| |||   |||||| ||||||||||||| || || ||| |||||||||    
T  22484871 acaaatttttatggtattgaataattttctgtattatataatttttgggtgacgaaatgctatttttgtattttagacaacttatacgtgggacaaaaag 22484772  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||||  ||  ||| |  ||| ||||||||| ||| |||||||   ||| |||| || | |||||||||||||||||    
T  22484771 ttgtgttgtagtttggcaaggaacaaaaattgtagcttttgtcatgtcccttgcctccagtttgtcatgtccctgaa 22484695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 19190653 - 19190716
Alignment:
Q  65 ttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaa 128  Q
    |||||||||||||||||| ||||| | |||||| |||||||||| || ||||||||| ||||||    
T  19190653 ttatacgatttttggtggtcaaaaaactatttttgtattttagataacttgtatgtgagacaaa 19190716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 24721502 - 24721585
Alignment:
Q  92 tattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtcc 175  Q
    ||||||||| |||||||||| ||||||||| || |||||||||||  ||| |||  ||||| || |||||| ||||||||||||    
T  24721502 tattttggtgttttagacaacttgtatgtgggataaaaagttgtgttgtggtttgttgaggtaccaaaattttagtttttgtcc 24721585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 32538641 - 32538586
Alignment:
Q  54 aattttttgtcttatacgatttttggtggacaaaagattattttggtattttagac 109  Q
    |||||||| |||||||| || |||| ||||||||||||||||||| ||||||||||    
T  32538641 aattttttatcttatacaatatttgatggacaaaagattattttgatattttagac 32538586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 47041644 - 47041559
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaaga---ttattttggtattttagacaatttgtatgt 120  Q
    ||||||||| ||||||| |||||| ||| |||  ||||| ||| |||||| ||   ||||||||||||||||||||||||||||||    
T  47041644 ttttatgatattgaatagttttttatctcataaaattttcggtagacaaatgactattattttggtattttagacaatttgtatgt 47041559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 51813371 - 51813449
Alignment:
Q  54 aattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagt 132  Q
    |||||||||||||||| |||||| ||  |||||||  |||||||||||||||| |||| |||||| ||  |||||||||    
T  51813371 aattttttgtcttataagattttcggcagacaaaatgttattttggtattttatacaacttgtatttggaacaaaaagt 51813449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 45691012 - 45690924
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||||||||| || ||||||||||||||| |||| |||    ||||||||||||||||||| || |  ||| |||||||||||||||    
T  45691012 ttgaataattttt-gttttatacgatttttggaggacgaaatgcgattttggtattttagacaacttatgcgtgagacaaaaagttgtgc 45690924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 53046753 - 53046692
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagac 109  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   ||||||||||||||||||    
T  53046753 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagac 53046692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 30258835 - 30258895
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattatttt 97  Q
    |||||||| | || |||||||||| |||||||||||||||| || ||||||||| ||||||    
T  30258835 tttttatggtattcaataatttttggtcttatacgattttttgtagacaaaagactatttt 30258895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 27176417 - 27176504
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||||||  ||||||| |||||| |||||||||||  || ||||  ||||||||||||||| || ||| || |||| ||||||    
T  27176417 ttgaataatttttaatcttatatgatttt-ggtggacaaaaagttgttttaatattttagacaatttatacgtgggataaaacgttgtg 27176504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 36772017 - 36772081
Alignment:
Q  72 atttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    ||||||||||||||||||   ||||| ||||||||||||| |||||  ||| |||||| ||||||    
T  36772017 atttttggtggacaaaagtcaattttcgtattttagacaacttgtacttgttacaaaaggttgtg 36772081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 39215547 - 39215499
Alignment:
Q  82 gacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaa 130  Q
    |||||||  ||||||||||||||||||||| ||||| ||| ||||||||    
T  39215547 gacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaa 39215499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 162
Target Start/End: Complemental strand, 33678 - 33554
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||||| ||||||||||||| ||||||||| | ||||| ||||||||||  ||||||||||||||| |||||||||| ||| ||||||||||||||     
T  33678 ttttatgatattgaataatttttggtcttatacaagttttgatggacaaaagcctattttggtattttatacaatttgtacgtgggacaaaaagttgtgt 33579  T
Q  138 agtgatttagtgagggacaaaaatt 162  Q
     ||| |||  |||||||||| ||||    
T  33578 tgtggtttgatgagggacaagaatt 33554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 1795 - 1641
Alignment:
Q  20 gaacaacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatg 119  Q
    ||||||||||  |||| |||||||| | |||||||||||||||| ||||| || |||||  |||| |||   ||||||||| |||||||||| ||||| |    
T  1795 gaacaacacagaacaaatttttatggtattgaataattttttgttttatatgacttttgagggacgaaatgctattttggttttttagacaacttgtacg 1696  T
Q  120 tgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    || ||||||||||||||  ||| ||| ||||||||||||||||  ||||||||||    
T  1695 tgggacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtc 1641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 174
Target Start/End: Original strand, 51400 - 51536
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||| ||||||||||| ||||||||||||||  ||||||||   ||||||| |||||||||||| ||||| ||| ||||||||||||||    
T  51400 tttttatgacattgagtaattttttgttttatacgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgggacaaaaagttgtg 51499  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
    | ||| ||| |||||||||||||||   ||||||||||    
T  51500 ctgtggttt-gtgagggacaaaaatatgagtttttgtc 51536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 5580 - 5451
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||||| |  | |||  ||||||| ||||||||| ||| ||||||||| |||||||||    
T  5580 acaaatttttatgacattgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtatgtgggacaaaaag 5481  T
Q  132 ttgtgcagtgatttagtgagggacaaaaat 161  Q
    |||||  ||| ||| |||||||||||||||    
T  5480 ttgtgatgtggtttggtgagggacaaaaat 5451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 13827 - 13651
Alignment:
Q  32 acaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaag 131  Q
    |||| |||||||| | ||||||||||| |||| ||||| | ||||||| ||||  ||   ||||||||| |||||||||| ||||| ||| |||||||||    
T  13827 acaaatttttatggtattgaataatttcttgttttatatgctttttgggggacggaatgctattttggtgttttagacaacttgtaagtgggacaaaaag 13728  T
Q  132 ttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    |||| | ||| ||| ||||||||||||||||  ||||||||||| |||| |||| || | |||||  ||||||||||    
T  13727 ttgtactgtggtttggtgagggacaaaaatttcagtttttgtcctatcccttgcctccagtttgttctgtccctgaa 13651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 101921 - 102047
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||||||||||   ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  101921 ttgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgatgtggtttgg 102020  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  102021 tgagggacaaaaatatgagtttttgtc 102047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 373088 - 372962
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||   || ||| |    
T  373088 ttgagtaattttttgttttatacgatttttgagggacaaaatgatattttggtattttagacaacttgtacgtgggacaaaaagttgtgttatggtttgg 372989  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||||||||||||||   ||||||||||    
T  372988 tgagggacaaaaatatgagtttttgtc 372962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 19854 - 20005
Alignment:
Q  23 caacacatcacaagtttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgt 122  Q
    |||||||| ||||  ||||||| | ||||||||| ||| |  |||| ||||||||| || |||||||| ||||||||||||| | |||| ||||| |||     
T  19854 caacacatgacaaacttttatggtattgaataatatttggcgttatgcgatttttgatgaacaaaagactattttggtatttcaaacaacttgtacgtga 19953  T
Q  123 gacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
     |||||||||||| ||||| ||||||||| ||||| ||||  ||||||||||    
T  19954 aacaaaaagttgtacagtggtttagtgagtgacaagaatttcagtttttgtc 20005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 23549 - 23673
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| ||||||||||||||  ||||||    ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||| |    
T  23549 ttgagtaattttttgttttatacgatttttgagggacaatg--ttattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttgg 23646  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    ||| ||||||||||   ||||||||||    
T  23647 tgaaggacaaaaatatgagtttttgtc 23673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 13703 - 13589
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||| || ||||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||  |||||||||||||||||  ||  |||||    
T  13703 ttgattaattattggtcttatacgatttttgatggacaaaatactattttggtattctagacaacttgtacatgtgacaaaaagttgtgtcgtattttag 13604  T
Q  148 tgagggacaaaaatt 162  Q
    |||| |||| |||||    
T  13603 tgagagacacaaatt 13589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 174
Target Start/End: Complemental strand, 15512 - 15379
Alignment:
Q  37 tttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtg 136  Q
    |||||||||  |||| ||||||||||| ||||||||||||||  |    |||   |||||||||||||||||||| |||||  || ||||||||||||||    
T  15512 tttttatgacattgagtaattttttgttttatacgatttttgagg----aaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtg 15417  T
Q  137 cagtgatttagtgagggacaaaaattctagtttttgtc 174  Q
      ||| ||| |||||||||||||||   ||||||||||    
T  15416 ttgtggtttggtgagggacaaaaatatgagtttttgtc 15379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 15144 - 15270
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| |||||| |||| ||||| ||||||||| |||||||| | |||||| ||||||||||||| ||||| ||| ||||||||||||||  ||| ||| |    
T  15144 ttgagtaatttgttgttttataagatttttgggggacaaaatactattttagtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgg 15243  T
Q  148 tgagggacaaaaattctagtttttgtc 174  Q
    || |||||||||||   ||||||||||    
T  15244 tgggggacaaaaatatgagtttttgtc 15270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 174
Target Start/End: Complemental strand, 108436 - 108303
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||||| |||||||||||| |||||||||||||||||| |||| ||    ||||||||||| ||||||||||||| |  || |||||||||||||      
T  108436 ttttatgatattgaataattttatgtcttatacgatttttgatggataa---gttattttggtactttagacaatttgcacttgagacaaaaagttgtat 108340  T
Q  138 agtgatttagtgagggacaaaaattctagtttttgtc 174  Q
     ||| ||||||||  ||||||| || | |||||||||    
T  108339 tgtgctttagtgaatgacaaaatttttggtttttgtc 108303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 174
Target Start/End: Complemental strand, 111206 - 111073
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgc 137  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||| ||    ||||||||||| |||||| |||||| |  || ||||||||||| |      
T  111206 ttttatgatattgaataattttatgtcttatacgatttttggtggataa---gttattttggtactttagataatttgcacttgagacaaaaagttctat 111110  T
Q  138 agtgatttagtgagggacaaaaattctagtttttgtc 174  Q
     ||| ||||||||  ||||||||||  ||||||||||    
T  111109 tgtgctttagtgaatgacaaaaatttcagtttttgtc 111073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 2648 - 2460
Alignment:
Q  20 gaacaacacatcacaagttttt-atgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||||| |||| ||||| ||||  |||  ||||||||||| ||||||||||||||| ||||||||   |||||||||||||||||||| |||||     
T  2648 gaacaacacatgacaaattttttatgagattgggtaattttttgttttatacgatttttgggggacaaaatgctattttggtattttagacaacttgtac 2549  T
Q  119 gtgtgacaaaaagttgtgcagtgatttagtgagggacaaaaattctagtttttgtccaatccattgcatctaatttgtcatgtccctgaa 208  Q
    ||| ||| || |||||||  ||| ||| || ||||||||| ||   |||||||||||  ||| || | || |||||||| ||| ||||||    
T  2548 gtgagac-aatagttgtgttgtggtttggttagggacaaagatatgagtttttgtcctgtccctttcctccaatttgtcttgtacctgaa 2460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 3762 - 3682
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtat 118  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||| |||| | |||||| |||||||||| || ||||||    
T  3762 ttttatgatattgaataattttttatcttatatgatttttggtggataaaaaactatttttgtattttagataacttgtat 3682  T

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Target: scaffold0729 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 4703 - 4555
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    |||| ||||||||||| |||||||||||||    |||||||   ||||||| | |||||||||| || || ||| ||||||||||||||  ||| ||| |    
T  4703 ttgagtaattttttgttttatacgattttttagagacaaaatgatattttgatgttttagacaacttttacgtgggacaaaaagttgtgttgtggtttgg 4604  T
Q  148 tgagggacaaaaattctagtttttgtccaatccattgcatctaatttgt 196  Q
    ||||||||||||||   |||||||||||  ||| |||| || |||||||    
T  4603 tgagggacaaaaatatgagtttttgtcctgtcccttgcctccaatttgt 4555  T

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Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 7586 - 7456
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagat-tattttggtattttagacaatttgtatgtgtgacaaaaa---gttgtgcagtgat 143  Q
    ||||||||||||| ||||||||  ||||||  ||||||||| || |||||||||||||||||||| | ||| ||| ||||||||    |||||  |||||    
T  7586 ttgaataatttttggtcttatataatttttaatggacaaaaaatctattttggtattttagacaactcgtacgtgagacaaaaaaatcttgtgttgtgat 7487  T
Q  144 ttagtgagggacaaaaattctagtttttgtc 174  Q
    |||||||| ||||| ||||  ||||||||||    
T  7486 ttagtgagagacaagaatttcagtttttgtc 7456  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 43073 - 42949
Alignment:
Q  48 ttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaatttgtatgtgtgacaaaaagttgtgcagtgatttag 147  Q
    ||||||||||| |||| ||||| |||| || | |||||| |   ||||||||| |||||||||||| ||| ||| ||||||||||||||  ||| ||| |    
T  43073 ttgaataatttcttgttttatatgattgtttggggacaacatgctattttggtgttttagacaatt-gtacgtgggacaaaaagttgtgttgtggtttgg 42975  T
Q  148 tgagggacaaaaattctagtttttgt 173  Q
    ||||||||| |||||  |||||||||    
T  42974 tgagggacacaaatttcagtttttgt 42949  T

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Target: scaffold0236 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 19784 - 19860
Alignment:
Q  38 ttttatgatgttgaataattttttgtcttatacgatttttggtggacaaaagattattttggtattttagacaattt 114  Q
    |||||||||  | |||||||||||||||| |||||||||| | | |||||| | |||||| | ||||||||||||||    
T  19784 ttttatgatactaaataattttttgtcttgtacgattttttgcgtacaaaaaactatttttgaattttagacaattt 19860  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 99897 - 99841
Alignment:
Q  56 ttttttgtcttatacgatttttggtggacaaaagatta-ttttggtattttagacaa 111  Q
    ||||||||||| |||||| ||||||||| ||||  ||| ||||||||||||||||||    
T  99897 ttttttgtcttgtacgatgtttggtggataaaaagttatttttggtattttagacaa 99841  T

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