View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10873_low_8 (Length: 243)
Name: NF10873_low_8
Description: NF10873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10873_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 49534185 - 49534409
Alignment:
| Q |
1 |
tagaaaagaatatctatgaataatattatttcaatagatatgtccagccatttaaatcactcacccacaggattatatacatactaagatacttcattct |
100 |
Q |
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| T |
49534185 |
tagaaaagaatatctatgaataatattatttcaatagatatgtccagccatttaaatcactcacccacaggattatatacatactaagatacttcattct |
49534284 |
T |
|
| Q |
101 |
caatctccaattcttcatgcctaaaagcaattaaaacttggtat-ccgtcctctttctctctgtctagaccattagaagatcaagtgaatgttcggcttg |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49534285 |
caatctccaattcttcatgcctaaaagcaattaaaacttggtataccgtccactttctctctgtctagaccattagaagatcaagtgaatgttcggcttg |
49534384 |
T |
|
| Q |
200 |
ccggtgatattgacatagtcacggt |
224 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
49534385 |
ccggtgatattgacatagtcacggt |
49534409 |
T |
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