View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10875_low_7 (Length: 236)

Name: NF10875_low_7
Description: NF10875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10875_low_7
NF10875_low_7
[»] chr5 (48 HSPs)
chr5 (1-222)||(3859250-3859470)
chr5 (46-163)||(2063732-2063850)
chr5 (45-163)||(24269869-24269988)
chr5 (45-162)||(41666756-41666875)
chr5 (46-163)||(41666991-41667110)
chr5 (45-163)||(8081111-8081232)
chr5 (45-163)||(24346499-24346619)
chr5 (45-162)||(18333464-18333583)
chr5 (46-163)||(24528508-24528626)
chr5 (84-162)||(60092-60172)
chr5 (45-163)||(15480523-15480645)
chr5 (44-162)||(19705868-19705988)
chr5 (46-163)||(24346735-24346854)
chr5 (87-160)||(8098326-8098400)
chr5 (87-162)||(20510641-20510718)
chr5 (87-166)||(27132988-27133069)
chr5 (89-163)||(13296683-13296758)
chr5 (83-163)||(18333697-18333780)
chr5 (46-160)||(42295546-42295662)
chr5 (45-162)||(95265-95384)
chr5 (50-163)||(1564565-1564680)
chr5 (46-163)||(24531567-24531685)
chr5 (87-160)||(8287810-8287884)
chr5 (83-163)||(15480326-15480408)
chr5 (83-163)||(21306891-21306973)
chr5 (83-163)||(21314729-21314811)
chr5 (83-159)||(24647700-24647778)
chr5 (98-163)||(25258092-25258158)
chr5 (98-163)||(25321882-25321948)
chr5 (50-162)||(28510062-28510176)
chr5 (89-160)||(29909722-29909795)
chr5 (111-160)||(34328945-34328994)
chr5 (83-161)||(9368599-9368679)
chr5 (48-162)||(9368799-9368915)
chr5 (83-162)||(16293355-16293434)
chr5 (46-102)||(17017152-17017208)
chr5 (42-160)||(24487646-24487766)
chr5 (45-162)||(12034656-12034775)
chr5 (45-162)||(18885428-18885548)
chr5 (73-162)||(32908717-32908808)
chr5 (48-99)||(36040540-36040591)
chr5 (83-164)||(38976937-38977020)
chr5 (87-163)||(13296900-13296978)
chr5 (83-163)||(24270104-24270185)
chr5 (48-160)||(26137110-26137224)
chr5 (111-160)||(7607628-7607677)
chr5 (46-160)||(6413658-6413773)
chr5 (89-160)||(19522331-19522403)
[»] scaffold0092 (1 HSPs)
scaffold0092 (46-163)||(5622-5741)
[»] chr6 (35 HSPs)
chr6 (46-160)||(12330292-12330407)
chr6 (45-162)||(9705220-9705339)
chr6 (45-162)||(4868576-4868695)
chr6 (48-160)||(30256782-30256895)
chr6 (48-162)||(25065093-25065209)
chr6 (46-163)||(4868811-4868930)
chr6 (46-147)||(2753225-2753328)
chr6 (46-160)||(8566960-8567075)
chr6 (46-163)||(13353168-13353287)
chr6 (45-162)||(17147659-17147778)
chr6 (46-163)||(33494506-33494625)
chr6 (46-163)||(33796293-33796412)
chr6 (46-111)||(12199736-12199802)
chr6 (45-158)||(32290929-32291043)
chr6 (53-160)||(12330180-12330289)
chr6 (46-163)||(6542941-6543060)
chr6 (87-160)||(8026397-8026472)
chr6 (87-160)||(27772722-27772797)
chr6 (83-163)||(6400618-6400700)
chr6 (87-163)||(11721913-11721991)
chr6 (45-161)||(30256544-30256662)
chr6 (45-156)||(12329949-12330062)
chr6 (73-163)||(30849400-30849492)
chr6 (119-162)||(4161845-4161888)
chr6 (119-162)||(4223465-4223508)
chr6 (98-160)||(8026624-8026687)
chr6 (46-163)||(9704987-9705106)
chr6 (83-168)||(19639106-19639193)
chr6 (87-163)||(11085589-11085667)
chr6 (83-160)||(15082145-15082223)
chr6 (83-150)||(4906810-4906879)
chr6 (83-163)||(7915854-7915935)
chr6 (83-162)||(16570163-16570244)
chr6 (46-141)||(24554084-24554181)
chr6 (45-101)||(7638652-7638708)
[»] chr4 (45 HSPs)
chr4 (45-162)||(35788860-35788979)
chr4 (46-162)||(22845446-22845564)
chr4 (46-163)||(35788626-35788745)
chr4 (45-163)||(11036509-11036629)
chr4 (40-163)||(50543565-50543690)
chr4 (45-162)||(39902562-39902681)
chr4 (44-163)||(35796975-35797096)
chr4 (45-163)||(36685873-36685992)
chr4 (46-162)||(22863441-22863559)
chr4 (83-163)||(5398474-5398555)
chr4 (44-163)||(22231306-22231427)
chr4 (83-162)||(44118858-44118939)
chr4 (45-101)||(40717268-40717324)
chr4 (45-163)||(50543328-50543448)
chr4 (45-162)||(6218405-6218524)
chr4 (87-160)||(21498803-21498878)
chr4 (45-162)||(22231072-22231191)
chr4 (87-160)||(25052860-25052935)
chr4 (83-160)||(28245527-28245606)
chr4 (86-163)||(35609709-35609788)
chr4 (83-164)||(52559571-52559654)
chr4 (87-160)||(53814675-53814750)
chr4 (87-163)||(1518172-1518250)
chr4 (83-152)||(5398221-5398291)
chr4 (87-163)||(6218212-6218290)
chr4 (46-162)||(21684965-21685083)
chr4 (86-162)||(22827545-22827623)
chr4 (79-163)||(40717439-40717525)
chr4 (46-160)||(14783188-14783304)
chr4 (87-160)||(9685640-9685715)
chr4 (87-160)||(21498362-21498437)
chr4 (46-163)||(35645763-35645882)
chr4 (45-162)||(35796741-35796860)
chr4 (46-163)||(22445415-22445538)
chr4 (83-163)||(34358028-34358110)
chr4 (86-162)||(35609489-35609567)
chr4 (122-163)||(12869261-12869302)
chr4 (122-163)||(17111608-17111649)
chr4 (83-166)||(18528212-18528297)
chr4 (87-163)||(21750275-21750352)
chr4 (46-140)||(400586-400682)
chr4 (84-160)||(26549641-26549720)
chr4 (45-101)||(27634143-27634199)
chr4 (111-163)||(35819126-35819178)
chr4 (122-162)||(43743264-43743304)
[»] chr2 (41 HSPs)
chr2 (45-162)||(16419468-16419587)
chr2 (46-163)||(2029736-2029855)
chr2 (45-162)||(25082536-25082655)
chr2 (73-161)||(32356380-32356469)
chr2 (45-163)||(2029970-2030090)
chr2 (45-162)||(15124547-15124666)
chr2 (87-163)||(28407791-28407869)
chr2 (83-163)||(33606287-33606369)
chr2 (85-163)||(40379442-40379522)
chr2 (45-162)||(5711438-5711557)
chr2 (46-163)||(14466408-14466527)
chr2 (85-162)||(40379208-40379287)
chr2 (40-160)||(17854930-17855052)
chr2 (87-166)||(19191605-19191686)
chr2 (45-160)||(33606056-33606172)
chr2 (46-160)||(12343751-12343867)
chr2 (46-163)||(15124781-15124901)
chr2 (46-101)||(3738900-3738955)
chr2 (43-168)||(9927873-9928002)
chr2 (45-164)||(5711672-5711793)
chr2 (79-163)||(19544369-19544454)
chr2 (87-163)||(27897604-27897681)
chr2 (42-161)||(29718291-29718412)
chr2 (45-160)||(36316052-36316169)
chr2 (46-163)||(17719367-17719486)
chr2 (85-163)||(21840323-21840402)
chr2 (46-163)||(37840304-37840423)
chr2 (87-163)||(5206706-5206784)
chr2 (122-163)||(93625-93666)
chr2 (87-162)||(14927301-14927378)
chr2 (45-160)||(40149004-40149121)
chr2 (83-165)||(14927106-14927190)
chr2 (111-163)||(16419301-16419353)
chr2 (83-145)||(16533551-16533615)
chr2 (122-162)||(17719611-17719651)
chr2 (87-169)||(17854684-17854768)
chr2 (84-162)||(19570973-19571053)
chr2 (83-162)||(24395868-24395948)
chr2 (46-156)||(37769948-37770060)
chr2 (45-101)||(37812330-37812386)
chr2 (45-101)||(37812560-37812616)
[»] chr3 (46 HSPs)
chr3 (44-163)||(54368481-54368602)
chr3 (46-163)||(16926947-16927066)
chr3 (46-163)||(54567859-54567978)
chr3 (45-162)||(31317432-31317551)
chr3 (45-162)||(35038193-35038312)
chr3 (46-163)||(31317196-31317314)
chr3 (44-163)||(16239556-16239677)
chr3 (87-163)||(1723074-1723152)
chr3 (84-160)||(13574922-13575000)
chr3 (87-163)||(17638243-17638320)
chr3 (45-156)||(20327619-20327732)
chr3 (45-163)||(8018934-8019054)
chr3 (45-163)||(39620292-39620412)
chr3 (84-160)||(50052540-50052619)
chr3 (86-163)||(4155331-4155410)
chr3 (87-160)||(11589793-11589868)
chr3 (45-162)||(17638374-17638490)
chr3 (46-163)||(22729067-22729186)
chr3 (103-169)||(24866222-24866289)
chr3 (86-163)||(45138969-45139048)
chr3 (83-163)||(3975356-3975438)
chr3 (86-141)||(23610391-23610448)
chr3 (83-158)||(45138805-45138882)
chr3 (84-162)||(2806285-2806365)
chr3 (111-163)||(28087213-28087265)
chr3 (46-162)||(34610527-34610646)
chr3 (64-162)||(43781568-43781668)
chr3 (45-162)||(4155525-4155644)
chr3 (122-165)||(26753517-26753560)
chr3 (50-163)||(30179706-30179821)
chr3 (46-163)||(35038426-35038545)
chr3 (85-163)||(39620099-39620178)
chr3 (46-111)||(2123774-2123840)
chr3 (83-162)||(50083079-50083161)
chr3 (83-162)||(472059-472140)
chr3 (83-156)||(13741106-13741182)
chr3 (122-163)||(27086635-27086676)
chr3 (45-160)||(29215590-29215707)
chr3 (103-159)||(33205490-33205547)
chr3 (83-163)||(46794058-46794139)
chr3 (111-159)||(13574686-13574734)
chr3 (84-162)||(18757847-18757927)
chr3 (123-163)||(26272322-26272362)
chr3 (122-162)||(29089895-29089935)
chr3 (111-163)||(33640079-33640131)
chr3 (45-163)||(39269297-39269417)
[»] chr8 (45 HSPs)
chr8 (46-163)||(12688039-12688158)
chr8 (46-162)||(25325613-25325731)
chr8 (45-162)||(5931948-5932067)
chr8 (46-163)||(11232427-11232546)
chr8 (45-162)||(39960157-39960277)
chr8 (45-163)||(11232192-11232312)
chr8 (45-160)||(34653117-34653233)
chr8 (46-163)||(24532419-24532538)
chr8 (45-162)||(35682780-35682899)
chr8 (86-163)||(37001471-37001550)
chr8 (46-163)||(39052927-39053046)
chr8 (83-163)||(8084131-8084213)
chr8 (42-167)||(12547062-12547188)
chr8 (45-160)||(422218-422335)
chr8 (83-163)||(10884068-10884150)
chr8 (49-163)||(12688277-12688393)
chr8 (45-160)||(28213105-28213221)
chr8 (46-163)||(12317013-12317132)
chr8 (79-160)||(16050029-16050112)
chr8 (87-160)||(19256587-19256662)
chr8 (87-160)||(24075307-24075382)
chr8 (86-163)||(37001233-37001312)
chr8 (87-162)||(42846604-42846682)
chr8 (46-162)||(10449967-10450085)
chr8 (83-163)||(20301265-20301347)
chr8 (83-163)||(21087897-21087979)
chr8 (83-163)||(41790663-41790744)
chr8 (45-160)||(28069358-28069475)
chr8 (78-160)||(4828067-4828151)
chr8 (53-163)||(5932182-5932294)
chr8 (78-159)||(4828292-4828375)
chr8 (87-160)||(17469826-17469901)
chr8 (87-160)||(17477073-17477148)
chr8 (87-160)||(19256821-19256896)
chr8 (46-163)||(36917437-36917556)
chr8 (87-160)||(39743537-39743612)
chr8 (86-162)||(22638178-22638256)
chr8 (90-162)||(27204975-27205049)
chr8 (90-162)||(27205073-27205147)
chr8 (90-162)||(27205171-27205245)
chr8 (83-162)||(8084366-8084447)
chr8 (83-146)||(38447442-38447507)
chr8 (83-163)||(3157557-3157640)
chr8 (46-160)||(34842645-34842761)
chr8 (46-162)||(35385810-35385929)
[»] chr7 (33 HSPs)
chr7 (45-162)||(34027593-34027712)
chr7 (45-160)||(29469806-29469923)
chr7 (45-163)||(26239914-26240034)
chr7 (45-162)||(31892353-31892472)
chr7 (83-164)||(47710447-47710530)
chr7 (83-164)||(47722103-47722186)
chr7 (83-163)||(25620140-25620222)
chr7 (48-163)||(33996309-33996426)
chr7 (83-165)||(3038080-3038164)
chr7 (46-164)||(21054950-21055070)
chr7 (46-160)||(29469572-29469688)
chr7 (45-162)||(48243060-48243177)
chr7 (46-160)||(48661556-48661672)
chr7 (87-160)||(10903093-10903168)
chr7 (84-162)||(10420650-10420729)
chr7 (46-163)||(21861261-21861380)
chr7 (87-160)||(34027401-34027476)
chr7 (45-162)||(43688159-43688277)
chr7 (83-156)||(11211684-11211758)
chr7 (83-163)||(36277224-36277306)
chr7 (83-163)||(48243435-48243517)
chr7 (45-162)||(21861495-21861614)
chr7 (87-160)||(31257032-31257107)
chr7 (46-163)||(28080632-28080750)
chr7 (45-165)||(36993070-36993192)
chr7 (87-162)||(6634863-6634940)
chr7 (65-156)||(8075845-8075938)
chr7 (122-163)||(40121922-40121963)
chr7 (45-101)||(6001497-6001553)
chr7 (84-162)||(15317557-15317637)
chr7 (43-141)||(18826508-18826608)
chr7 (112-160)||(31257268-31257316)
chr7 (83-163)||(32879612-32879695)
[»] scaffold0481 (1 HSPs)
scaffold0481 (44-160)||(3472-3590)
[»] chr1 (45 HSPs)
chr1 (45-164)||(25713359-25713480)
chr1 (83-162)||(42586438-42586518)
chr1 (46-163)||(4113004-4113123)
chr1 (45-162)||(26177109-26177228)
chr1 (46-163)||(43409774-43409892)
chr1 (45-164)||(35772230-35772351)
chr1 (83-162)||(40079156-40079237)
chr1 (73-163)||(38668119-38668211)
chr1 (46-162)||(20208527-20208643)
chr1 (46-156)||(38080572-38080683)
chr1 (45-165)||(25145481-25145603)
chr1 (53-160)||(17452680-17452789)
chr1 (42-160)||(3169729-3169849)
chr1 (46-163)||(17452826-17452945)
chr1 (87-163)||(30369843-30369921)
chr1 (84-160)||(40316051-40316129)
chr1 (122-163)||(33157266-33157307)
chr1 (46-99)||(35303504-35303557)
chr1 (83-162)||(39348118-39348199)
chr1 (45-160)||(51589192-51589309)
chr1 (111-163)||(25255345-25255397)
chr1 (83-161)||(34264710-34264790)
chr1 (84-162)||(42351859-42351939)
chr1 (46-163)||(2859625-2859744)
chr1 (45-162)||(4112539-4112658)
chr1 (46-163)||(26176875-26176994)
chr1 (45-162)||(38733348-38733467)
chr1 (86-163)||(39348351-39348429)
chr1 (87-160)||(51589814-51589889)
chr1 (98-163)||(31432228-31432294)
chr1 (122-164)||(31496368-31496410)
chr1 (98-163)||(33156753-33156819)
chr1 (50-162)||(49142924-49143038)
chr1 (87-160)||(52127729-52127803)
chr1 (84-160)||(52907389-52907467)
chr1 (122-163)||(29265998-29266039)
chr1 (45-98)||(31496202-31496254)
chr1 (122-163)||(35772074-35772115)
chr1 (83-162)||(52650770-52650851)
chr1 (123-163)||(2120123-2120163)
chr1 (45-163)||(25145718-25145838)
chr1 (45-101)||(35892257-35892313)
chr1 (86-160)||(51460443-51460519)
chr1 (45-160)||(51590006-51590121)
chr1 (45-159)||(52961548-52961664)
[»] scaffold0519 (2 HSPs)
scaffold0519 (46-163)||(1883-2002)
scaffold0519 (45-162)||(2117-2236)
[»] scaffold0692 (2 HSPs)
scaffold0692 (47-163)||(5752-5870)
scaffold0692 (83-162)||(5543-5624)
[»] scaffold0083 (1 HSPs)
scaffold0083 (47-163)||(51205-51322)
[»] scaffold0766 (1 HSPs)
scaffold0766 (45-158)||(6240-6355)
[»] scaffold0129 (1 HSPs)
scaffold0129 (83-163)||(14307-14389)
[»] scaffold0181 (1 HSPs)
scaffold0181 (83-162)||(20943-21024)
[»] scaffold0005 (2 HSPs)
scaffold0005 (46-160)||(56426-56542)
scaffold0005 (50-162)||(288656-288770)
[»] scaffold0048 (1 HSPs)
scaffold0048 (46-163)||(81809-81928)
[»] scaffold0400 (1 HSPs)
scaffold0400 (83-160)||(3848-3928)
[»] scaffold0365 (1 HSPs)
scaffold0365 (83-160)||(4492-4572)


Alignment Details
Target: chr5 (Bit Score: 134; Significance: 7e-70; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 3859470 - 3859250
Alignment:
Q  1 aatctaatatattttgtaattttgtagaatttttgtcaaataaagtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-g 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||| |    
T  3859470 aatctaatatattttgtaattttgtagaatttttgtcaaataaagtgttaagagtcccatatcggatagaacatgacctgataatgtgtttataagtgag 3859371  T
Q  100 ggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagataaagtaggttataatatatatgttctacgtggtct 198  Q
    |  |||||||| |||||| |  | |||||||| ||| |||||| | |||| | ||||||||||||||||||||||   ||||||||||||||||||||||    
T  3859370 gacaatcctcacctcacaagttaattttgtggggttatgttaggctcaattaagatttctaagataaagtaggtt---atatatatgttctacgtggtct 3859274  T
Q  199 tttatatttcaaatttatcatttt 222  Q
    ||||||||||||||||||||||||    
T  3859273 tttatatttcaaatttatcatttt 3859250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 2063850 - 2063732
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcactcacaggccagttttgtggagttgtgttagacc 144  Q
    |||||||||||||| ||| ||||||||||| | ||| |||||||||||||||||||  |||||||||||||| | | ||||||||| |||||||||| ||    
T  2063850 tgttaagagtcccacatcggatagaacatggtctgacaatgtgtttataagtgggggcaatcctcactcacaagtcggttttgtggggttgtgttaggcc 2063751  T
Q  145 caatcacgatttctaagat 163  Q
    ||| |||||||||||||||    
T  2063750 caaccacgatttctaagat 2063732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 24269988 - 24269869
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    ||||||||||||||| ||| ||||| |||||   ||| |||||||||||||||||||||||||||| |||||| ||| ||||| ||| |||||||||| |    
T  24269988 gtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggtaatcctcacctcacaagccggttttatggggttgtgttaggc 24269889  T
Q  144 ccaatcacgatttctaagat 163  Q
     ||| ||| |||||||||||    
T  24269888 tcaaccacaatttctaagat 24269869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 41666875 - 41666756
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| || || |||||   ||| |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| ||||||||||     
T  41666875 gtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 41666776  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  41666775 cccaaccacgatttctaaga 41666756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 41667110 - 41666991
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || |||||   ||| |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| |    
T  41667110 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 41667011  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||||||||||    
T  41667010 ccaaccacgatttctaagat 41666991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 8081232 - 8081111
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt--aatcctca-ctcacaggccagttttgtggagttgtgttag 141  Q
    ||||||||||||||| ||| ||||| |||||   ||| |||||||||||||||||||   |||||||| |||||| ||| ||||||||| ||||||||||    
T  8081232 gtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggggcaatcctcatctcacaagccggttttgtggggttgtgttag 8081133  T
Q  142 acccaatcacgatttctaagat 163  Q
     ||||| || ||||||||||||    
T  8081132 gcccaaccatgatttctaagat 8081111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 24346619 - 24346499
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||| |||||   ||| ||||||||||||||| ||||||||||||| |||||| ||| ||||| ||| ||||||||||     
T  24346619 gtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttatggggttgtgttagg 24346520  T
Q  143 cccaatcacgatttctaagat 163  Q
    | ||| ||| |||||||||||    
T  24346519 ctcaaccacaatttctaagat 24346499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 18333583 - 18333464
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||| ||||| ||| ||||| | ||| | ||| ||||||||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||     
T  18333583 gtgttaagaatcccacatcggataggagatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttagg 18333484  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||| | ||||||||    
T  18333483 cccaaccacaaattctaaga 18333464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 24528508 - 24528626
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||  |||||| || ||||| | ||| |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| |    
T  24528508 tgttaagagtcccg-atcagagaggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 24528606  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| || ||||||||||||    
T  24528607 ccaaccatgatttctaagat 24528626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 60092 - 60172
Alignment:
Q  84 atgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||||||  ||||||||| ||||| ||| ||||||||| ||| |||||||||||||||| ||||||||||    
T  60092 atgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttagacccaatcacaatttctaaga 60172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 15480523 - 15480645
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggta---atcctcac-tcacaggccagttttgtggagttgtgtta 140  Q
    ||||||||||||||| ||||||||  |||||   ||| || |||||||||||||||| |   |||||||| ||||| ||| ||||||||| |||||||||    
T  15480523 gtgttaagagtcccacatcagatatgacatggcctgacaacgtgtttataagtgggggatcaatcctcacctcacaagccggttttgtggggttgtgtta 15480622  T
Q  141 gacccaatcacgatttctaagat 163  Q
    | ||||| ||| |||||||||||    
T  15480623 ggcccaaccacaatttctaagat 15480645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 19705868 - 19705988
Alignment:
Q  44 agtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttag 141  Q
    |||||||||||||||| ||| | ||| ||||    ||| |||||||||||||||||||  ||||||||| | | | ||| ||||||||||||||||||||    
T  19705868 agtgttaagagtcccacatcgggtaggacatagcctgacaatgtgtttataagtgggggcaatcctcaccttataagccggttttgtggagttgtgttag 19705967  T
Q  142 acccaatcacgatttctaaga 162  Q
     ||||| ||||||||||||||    
T  19705968 gcccaaccacgatttctaaga 19705988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 24346854 - 24346735
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| |||  |||  |||||   ||| ||||| ||||||||||||| |||| ||||| ||||| ||| ||||||||| ||||||||||||    
T  24346854 tgttaagagtcccacatcgaataagacatggcctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagac 24346755  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||| ||||||    
T  24346754 ccaaccacgatttttaagat 24346735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 8098326 - 8098400
Alignment:
Q  87 tgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||||||| ||||||||| ||||| ||| ||||||||| |||||||||  ||||| ||||||||||||    
T  8098326 tgtttataagtggggcaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaa 8098400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 20510718 - 20510641
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||||  ||||||||| ||| |  ||||||||||||||||||||||| ||||| ||||||||||||||    
T  20510718 tgtttataagtgggggcaatcctcacctcaaaaaccagttttgtggagttgtgttaggcccaaacacgatttctaaga 20510641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 27133069 - 27132988
Alignment:
Q  87 tgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagataaa 166  Q
    |||||||||||| ||| ||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||||||||| |||||    
T  27133069 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatataaa 27132988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 13296683 - 13296758
Alignment:
Q  89 tttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||  ||||||||| ||||| ||||||||||||| |||||||||| ||||| |||||||||||||||    
T  13296683 tttataagtgggggcaatcctcacctcacaagccagttttgtgg-gttgtgttaggcccaaccacgatttctaagat 13296758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 18333780 - 18333697
Alignment:
Q  83 aatgtgtttataagt--ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||  ||||||||| ||| |||||| ||| ||||||||| |||||||||| ||||| ||||| |||||||||    
T  18333780 aatgtgtttataagtggggggtaatcgtcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaagat 18333697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 42295546 - 42295662
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggg-gtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||||| ||| |  ||   ||||||| |||||||||||||| | ||||||||| ||||| ||| |||||||||||||||||||| |    
T  42295546 tgttaagagtcccacatcagttaggagttggcctgataatttgtttataagtgggagcaatcctcacctcacaagccggttttgtggagttgtgttaggc 42295645  T
Q  144 ccaatcacgatttctaa 160  Q
    ||||  || ||||||||    
T  42295646 ccaacgacaatttctaa 42295662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 95384 - 95265
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||||||| || ||| |||||   ||||  ||| |||||||||||||||||||  |||||||| |||||| ||| ||||||||| ||||||||||     
T  95384 gtgttaagagtcacacatcggataggtgatgacctgacaatgtgtttataagtggggacaatcctcatctcacaagccggttttgtggggttgtgttagg 95285  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| || || ||||||||    
T  95284 cccaaccaagaattctaaga 95265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 1564680 - 1564565
Alignment:
Q  50 aagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaa 147  Q
    |||||||||| ||| ||||  | ||| | ||| |||||| ||||||||||||  ||||||||| ||||| | ||||||||||| |||||||||| | |||    
T  1564680 aagagtcccacatcggataagagatggtctgacaatgtgattataagtgggggcaatcctcacatcacaagacagttttgtggggttgtgttaggctcaa 1564581  T
Q  148 tcacgatttctaagat 163  Q
     |||||||||||||||    
T  1564580 ccacgatttctaagat 1564565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 24531567 - 24531685
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||  ||| || || ||||||  ||| |||||||||||||||||||  ||||||||| ||||| |||  |||||||| |||||||||  |    
T  24531567 tgttaagagtcccg-atcggagaggacatgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgc 24531665  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||||||||||    
T  24531666 ccaaccacgatttctaagat 24531685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 8287810 - 8287884
Alignment:
Q  87 tgtttataagtggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||||||| ||||| || |||||| ||| ||||||||| |||||||||| ||||| ||| ||||||||    
T  8287810 tgtttataagtggggcaatccccacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 8287884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 15480326 - 15480408
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||  ||||||||| ||||| ||  ||||||||| ||| |||||| ||||| |||||||||||||||    
T  15480326 aatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagat 15480408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 21306891 - 21306973
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||| |||||||||||||  ||||||||| ||||| ||| || ||||||  ||||||||||||||| |||||||||||||||    
T  21306891 aatgtatttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagat 21306973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 21314729 - 21314811
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||| |||||||||||||  ||||||||| ||||| ||| || ||||||  ||||||||||||||| |||||||||||||||    
T  21314729 aatgtatttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagat 21314811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 24647700 - 24647778
Alignment:
Q  83 aatgtgtttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttcta 159  Q
    ||||||||||||| ||| || ||||||||| ||||| ||| ||||||||||||||||||||  |||| |||||||||||    
T  24647700 aatgtgtttataactggtggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttcta 24647778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 25258158 - 25258092
Alignment:
Q  98 ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||| ||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  25258158 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 25321948 - 25321882
Alignment:
Q  98 ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||| ||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  25321948 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25321882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 28510062 - 28510176
Alignment:
Q  50 aagagtcccatatcagatagaacatgatatgataatgtgtttataagtgg-ggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaa 147  Q
    |||||||| | ||||||||  | ||||  ||| ||||||||||||||||  || |||||||| |||| | ||| ||||||||| |||||||||| |||||    
T  28510062 aagagtccaacatcagataagagatgacctgacaatgtgtttataagtgaaggcaatcctcatctcataagccggttttgtggggttgtgttaggcccaa 28510161  T
Q  148 tcacgatttctaaga 162  Q
     ||||||||||||||    
T  28510162 ccacgatttctaaga 28510176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 29909795 - 29909722
Alignment:
Q  89 tttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||| || ||||||||| ||||| ||| |||||||||||||||||||| ||||| ||| ||||||||    
T  29909795 tttataagtggaggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccaccatttctaa 29909722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 34328945 - 34328994
Alignment:
Q  111 ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||| ||| |||||||| ||||||||||| ||||||||||||||||||    
T  34328945 ctcacaagccggttttgtgaagttgtgttaggcccaatcacgatttctaa 34328994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 9368599 - 9368679
Alignment:
Q  83 aatgtgtttataagtgg-ggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaag 161  Q
    ||||||||||||||||| || |||||||| |||||| ||| ||||||||| |||||||||| ||||| ||  |||||||||    
T  9368599 aatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaag 9368679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 9368799 - 9368915
Alignment:
Q  48 ttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagaccc 145  Q
    |||||||||||| ||| ||||| | |||  |||| ||||||||||||||| |||| ||| ||||| ||||| |||  || ||||| |||||||||| |||    
T  9368799 ttaagagtcccacatcggataggagatggcatgacaatgtgtttataagtgggggcaattctcacttcacaagccgattatgtggggttgtgttaggccc 9368898  T
Q  146 aatcacgatttctaaga 162  Q
    || ||| ||||||||||    
T  9368899 aaccacaatttctaaga 9368915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 16293355 - 16293434
Alignment:
Q  83 aatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||||||| ||||||||| |||||  | || ||||||||||||| |||  ||||| ||||||||||||||    
T  16293355 aatgtgtttataagtggggcaatcctcacttcacaaactag-tttgtggagttgtattaagcccaaccacgatttctaaga 16293434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 17017208 - 17017152
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt 102  Q
    |||||||||||||||||||||||||| |||    || ||||||||||||||||||||    
T  17017208 tgttaagagtcccatatcagatagaagatggctcgacaatgtgtttataagtggggt 17017152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 24487766 - 24487646
Alignment:
Q  42 aaagtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgtt 139  Q
    ||||||||||||||| || ||| | ||| |  || | ||| ||| ||||||||||||||| |||||||||| ||||| ||| ||||||||  ||||||||    
T  24487766 aaagtgttaagagtctcacatcggttaggagttggtctgaaaatatgtttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgtt 24487667  T
Q  140 agacccaatcacgatttctaa 160  Q
    |  ||||| ||||||||||||    
T  24487666 aagcccaaccacgatttctaa 24487646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 12034656 - 12034775
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaa-tcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||||||| ||||  | |||   ||  || |||||||||| ||||| || ||||||| ||||| ||||||||||| |  |||||||||     
T  12034656 gtgttaagagtcccatatcggataagagatggcctgccaacgtgtttataaatgggggaaatcctcacctcacaagccagttttgtaggattgtgttagg 12034755  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  12034756 cccaaccacgatttctaaga 12034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 18885428 - 18885548
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcact---cacaggccagttttgtggagttgtgtta 140  Q
    ||||||||||||||| ||| |||| || ||| | ||| ||||||||||||||||| |  || ||||||    |||| |||||||||||||||||||||||    
T  18885428 gtgttaagagtcccacatc-gataaaagatggtctgacaatgtgtttataagtggagacaaccctcacctcacacaagccagttttgtggagttgtgtta 18885526  T
Q  141 gacccaatcacgatttctaaga 162  Q
    | | ||| ||| ||||||||||    
T  18885527 ggcacaaccaccatttctaaga 18885548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 32908808 - 32908717
Alignment:
Q  73 atgatatgataatgtgtttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||| ||| ||||||||||||||||| || |||| |||| |||||  || |||||| || ||| |||||||||||| ||||||||||||||    
T  32908808 atgatctgacaatgtgtttataagtggaggcaatcatcacctcacaaaccggttttgaggggttatgttagacccaaccacgatttctaaga 32908717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 36040591 - 36040540
Alignment:
Q  48 ttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgg 99  Q
    ||||||||  || ||||||||||| ||||| |||||||||||||||||||||    
T  36040591 ttaagagtttcacatcagatagaagatgatctgataatgtgtttataagtgg 36040540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 38976937 - 38977020
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagata 164  Q
    ||||||||||||||| |||  ||||||||| |||||  || ||||||||||| |||||||| | ||| ||||||||||||||||    
T  38976937 aatgtgtttataagttgggacaatcctcacctcacaaaccggttttgtggaggtgtgttaggcacaaccacgatttctaagata 38977020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 13296900 - 13296978
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||  || |||||| |||||  || |||||||||  ||||||||||||||| |||||||||||||||    
T  13296900 tgtttataagtgggggcaaccctcacctcacaaaccggttttgtgggattgtgttagacccaaccacgatttctaagat 13296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 24270185 - 24270104
Alignment:
Q  83 aatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||| ||||||||||||| |||| ||||| ||||| ||| ||||||||| ||||||||||| |||| |||||||| ||||||    
T  24270185 aatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttaga-ccaaccacgatttttaagat 24270104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 26137224 - 26137110
Alignment:
Q  48 ttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctca-ctcacaggccagttttgtggagttgtgttagaccc 145  Q
    |||||||||||| |||  |||| | ||||||||| ||  ||||||||| |||||  |||||||| ||||||  || ||||||||| ||| |||||||||     
T  26137224 ttaagagtcccacatcgaataggaaatgatatgacaacatgtttataaatgggggcaatcctcatctcacaaaccggttttgtggggttatgttagacct 26137125  T
Q  146 aatcacgatttctaa 160  Q
    || ||||||||||||    
T  26137124 aaccacgatttctaa 26137110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 7607628 - 7607677
Alignment:
Q  111 ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||| ||| |||||||||||||||||||| ||||| || |||||||||    
T  7607628 ctcacaagccggttttgtggagttgtgttaggcccaaccatgatttctaa 7607677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 6413773 - 6413658
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| ||||  | ||||| ||| ||||||||||||||| |||  ||||||||| ||| | ||| ||||| ||| ||||||||| ||    
T  6413773 tgttaagagtcccacatcggatatgagatgat-tgacaatgtgtttataagtagggacaatcctcacctcataagccggttttttggggttgtgttaaac 6413675  T
Q  144 ccaatcacgatttctaa 160  Q
    ||||  |||||||||||    
T  6413674 ccaacaacgatttctaa 6413658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 19522331 - 19522403
Alignment:
Q  89 tttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||||| |||  |||| ||||| |||  |||||||| |||||||||||| ||| ||||||||||||    
T  19522331 tttataagtggggcaataatcacctcacaagccgattttgtggggttgtgttagacacaaccacgatttctaa 19522403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 5622 - 5741
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||||||||||| |||  |||| ||||||||||||||| ||||||||||||| || ||| ||| ||||||||| ||||||||||||    
T  5622 tgttaagagtcccacatcagatagaagatggcatgacaatgtgtttataagtgggggtaatcctcatcttacaagccggttttgtggggttgtgttagac 5721  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||||||||||    
T  5722 ccaaccacgatttctaagat 5741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 12330407 - 12330292
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacc 144  Q
    |||||||||||||| ||| ||||| ||||| | ||| ||||||||||||||||||| |||||||| |||||| ||| ||||||||  |||||||||| ||    
T  12330407 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtggggcaatcctcatctcacaagccggttttgtgaggttgtgttaggcc 12330308  T
Q  145 caatcacgatttctaa 160  Q
    ||| ||||||||||||    
T  12330307 caaccacgatttctaa 12330292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 9705220 - 9705339
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||| |||||   | | |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||||    
T  9705220 gtgttaagagtcccacatcggataggacatggcttaacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaga 9705319  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  9705320 cccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 4868695 - 4868576
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| || || |||||   ||| |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| ||||||||||     
T  4868695 gtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 4868596  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  4868595 cccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 30256782 - 30256895
Alignment:
Q  48 ttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagaccca 146  Q
    |||||||||||| ||| |||||   ||||  ||| ||| ||||||||||||||| ||||||||| ||||| ||| ||||||||| |||||||||| ||||    
T  30256782 ttaagagtcccacatcggataggtgatgacctgacaatatgtttataagtggggcaatcctcacctcacaagccggttttgtggggttgtgttaggccca 30256881  T
Q  147 atcacgatttctaa 160  Q
    | ||||||||||||    
T  30256882 accacgatttctaa 30256895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 25065209 - 25065093
Alignment:
Q  48 ttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagaccc 145  Q
    |||||||||||| ||| ||||| ||||| | ||| ||| ||||||||||| |||| ||||||||| ||||| ||| ||||||||| |||||||||| |||    
T  25065209 ttaagagtcccacatcggataggacatggtctgacaatatgtttataagtaggggcaatcctcacctcacaagccggttttgtggggttgtgttaggccc 25065110  T
Q  146 aatcacgatttctaaga 162  Q
    ||  |||||||||||||    
T  25065109 aactacgatttctaaga 25065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 4868930 - 4868811
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || |||||   ||  |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| |    
T  4868930 tgttaagagtcccacatcggacaggacatggcctggcaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 4868831  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||||||||||    
T  4868830 ccaaccacgatttctaagat 4868811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 2753225 - 2753328
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || |||  ||||| ||| ||||||||||||||| ||||||||||||| |||||| | | ||||||||| |||||||||| |    
T  2753225 tgttaagagtcccacatcggaaagatgatgatctgacaatgtgtttataagtgggggtaatcctcacctcacaaggcggttttgtggggttgtgttaggc 2753324  T
Q  144 ccaa 147  Q
    ||||    
T  2753325 ccaa 2753328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 8567075 - 8566960
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacc 144  Q
    ||||||||||||||  || |||||   ||| | ||| ||||||||||||||||||  ||||||||| |||||  || ||||||||| |||||||||| ||    
T  8567075 tgttaagagtcccacctcggataggtgatggtctgacaatgtgtttataagtgggacaatcctcacctcacaaaccggttttgtggggttgtgttaggcc 8566976  T
Q  145 caatcacgatttctaa 160  Q
    ||| ||||||||||||    
T  8566975 caaccacgatttctaa 8566960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 13353168 - 13353287
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || |||||   ||| |||||||||||||||||||  ||||||||| | ||| ||| ||||||||| |||||||||| |    
T  13353168 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 13353267  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||||||||||    
T  13353268 ccaaccaccatttctaagat 13353287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 17147778 - 17147659
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||| ||||||  ||| ||||| ||||||||| |||| |||||||| |||||| ||| ||||||||| ||| ||||||     
T  17147778 gtgttaagagtcccacatcggataggacatgacctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttagg 17147679  T
Q  143 cccaatcacgatttctaaga 162  Q
     |||| ||| ||||||||||    
T  17147678 tccaaccaccatttctaaga 17147659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 33494506 - 33494625
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| ||||| | |||   ||| ||| |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| |    
T  33494506 tgttaagagtcccacatcggataggagatggcttgaaaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 33494605  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||||||||||    
T  33494606 ccaaccaccatttctaagat 33494625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 33796293 - 33796412
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || |||||   ||| |||||||||||||||||||  ||||||||| | ||| ||| ||||||||| |||||||||| |    
T  33796293 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 33796392  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||||||||||    
T  33796393 ccaaccaccatttctaagat 33796412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 12199802 - 12199736
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctcac 111  Q
    ||||||| |||||||||||||||||||||||  ||| ||||| ||||||||| ||||||||||||||    
T  12199802 tgttaagcgtcccatatcagatagaacatgacctgacaatgtatttataagtgggggtaatcctcac 12199736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 32290929 - 32291043
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    ||||||| ||||||| ||||||||||| || || ||  ||||||||||||| ||||| |||||||| ||| |||| | |||||||||  || |||||| |    
T  32290929 gtgttaaaagtcccacatcagatagaagattatctggcaatgtgtttataaatggggcaatcctcatctcgcaggtcggttttgtgggcttatgttaggc 32291028  T
Q  144 ccaatcacgatttct 158  Q
    |||| ||||||||||    
T  32291029 ccaaccacgatttct 32291043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 12330289 - 12330180
Alignment:
Q  53 agtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatca 150  Q
    ||||||| ||| ||||| ||||| | ||| |||||||||||||||||||  || |||||| ||||| ||| ||||||||  |||||||||| ||||| ||    
T  12330289 agtcccagatcggataggacatggtctgacaatgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaacca 12330190  T
Q  151 cgatttctaa 160  Q
    ||||||||||    
T  12330189 cgatttctaa 12330180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 6543060 - 6542941
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||| ||| ||| ||||  | ||| | ||| |||||||||||||||||||  |||| |||| ||| | ||| ||||||||| ||||||||||||    
T  6543060 tgttaagagttccacatcggataagagatggtctgacaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgttagac 6542961  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||||||||| |||||    
T  6542960 ccaaccacgatttcaaagat 6542941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 8026397 - 8026472
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  8026397 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 8026472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 27772722 - 27772797
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||||||||||||||  |||| ||||||||||||    
T  27772722 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttctaa 27772797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 6400700 - 6400618
Alignment:
Q  83 aatgtgtttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||||||| || ||||||||| ||||| | | ||||||||| |||||||||||||||| |||| ||| ||||||    
T  6400700 aatgtgtttataagtggaggcaatcctcacatcacaagtcggttttgtggggttgtgttagacccaaccacggtttttaagat 6400618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 11721913 - 11721991
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||  ||||||||| ||| | ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  11721913 tgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 11721991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 161
Target Start/End: Original strand, 30256544 - 30256662
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||||||| || ||| || |  ||||| | ||| ||||||||||||| |||||  |||||||| ||||||  || ||||||||| ||||||||||     
T  30256544 gtgttaagagtctcacatcggacaatacatggtttgacaatgtgtttataactgggggcaatcctcaactcacaaaccggttttgtggggttgtgttagg 30256643  T
Q  143 cccaatcacgatttctaag 161  Q
    ||||| |||||||||||||    
T  30256644 cccaaccacgatttctaag 30256662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 156
Target Start/End: Complemental strand, 12330062 - 12329949
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||  | ||||||| | ||||||||||||||| |||| |||||||| |||||| ||   |||||||  ||||||||||     
T  12330062 gtgttaagagtcccacatcggataagatatgatataacaatgtgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgttagg 12329963  T
Q  143 cccaatcacgattt 156  Q
    ||||| ||||||||    
T  12329962 cccaaccacgattt 12329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 30849492 - 30849400
Alignment:
Q  73 atgatatgataatgtgtttataagtggg-gtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||  |||||| ||||||||||| | ||||||||| || || ||| ||||||||| |||||| |||||| ||| ||||||||||||||    
T  30849492 atgatatggcaatgtgcttataagtgggagcaatcctcacatcgcaagccggttttgtggggttgtgctagacctaattacgatttctaagat 30849400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 4161888 - 4161845
Alignment:
Q  119 ccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||    
T  4161888 ccagttttgtggggttgtgttaggcccaaccacgatttctaaga 4161845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 4223508 - 4223465
Alignment:
Q  119 ccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||    
T  4223508 ccagttttgtggggttgtgttaggcccaaccacgatttctaaga 4223465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 8026624 - 8026687
Alignment:
Q  98 ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||| ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  8026624 ggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 8026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 9704987 - 9705106
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    ||||||||||| || ||| ||||| ||||    ||| |||||||||||||||||||  |||| |||| ||||| | | ||||||||| |||||||||| |    
T  9704987 tgttaagagtctcacatcggataggacatagcctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggc 9705086  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||||||||||    
T  9705087 ccaaccaccatttctaagat 9705106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 19639193 - 19639106
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagataaagt 168  Q
    |||||||||||||||||||  ||||||||| |||||  || |||| |||| | ||||||||  |||| ||||||||||||||||||||    
T  19639193 aatgtgtttataagtggggacaatcctcacctcacaaaccggtttagtggggctgtgttaggtccaaccacgatttctaagataaagt 19639106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 11085589 - 11085667
Alignment:
Q  87 tgtttataagtggggt-aatcctcact-cacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||  ||| |||||| |||| ||| ||||||||  ||||||||||  ||||||||||||||||||||    
T  11085589 tgtttataagtgggggcaattctcacttcacaagccggttttgtgcggttgtgttaggtccaatcacgatttctaagat 11085667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 15082223 - 15082145
Alignment:
Q  83 aatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||||   | ||||||| ||||| ||| |||||||||  ||||||||| ||||| ||||||||||||    
T  15082223 aatgtgtttataagtggaacagtcctcacctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaa 15082145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 4906810 - 4906879
Alignment:
Q  83 aatgtgtttataagtg-gggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatca 150  Q
    |||||||||||||||| ||| |||||||| |||||| ||||||||| |||  ||||||||||| ||||||    
T  4906810 aatgtgtttataagtgagggcaatcctcatctcacaagccagttttatgggattgtgttagacacaatca 4906879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 7915854 - 7915935
Alignment:
Q  83 aatgtgtttataagtggggt--aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||   ||||||||| ||||| |||  |||||||| |||||  ||||||||| |||||||||||||||    
T  7915854 aatgtgtttataagtggggggcaatcctcacctcacaagccgattttgtggggttgt--tagacccaaccacgatttctaagat 7915935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 16570163 - 16570244
Alignment:
Q  83 aatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||| |||| |||||||||| | ||| | | ||||||||| |||||||||| ||||| || |||||||||||    
T  16570163 aatgtgtttataagcgggggtaatcctcacgtaacaagtcggttttgtggggttgtgttaggcccaaccatgatttctaaga 16570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 141
Target Start/End: Original strand, 24554084 - 24554181
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttag 141  Q
    |||||||||||||| ||| ||||| | ||| | ||| ||| | |||||||||||||  |||| |||| ||||| ||| ||||||||||||||||||||    
T  24554084 tgttaagagtcccacatcggataggagatggtctgacaatatatttataagtgggggcaatcttcacctcacaagccggttttgtggagttgtgttag 24554181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 7638708 - 7638652
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg 101  Q
    |||||||||||| ||  |||||||| | ||||  |||||||||||||||||||||||    
T  7638708 gtgttaagagtctcacgtcagataggagatgacctgataatgtgtttataagtgggg 7638652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 35788860 - 35788979
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| |||||||||||   ||| ||||||||||||||| |||| |||||||| |||||| ||| ||||||||| ||||||||||     
T  35788860 gtgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttagg 35788959  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  35788960 cccaaccacgatttctaaga 35788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 22845564 - 22845446
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||||||||  |||||   ||| ||||||||||||||||||| |||||||||| ||||| ||| ||||||||| |||||||||| |    
T  22845564 tgttaagagtcccacatcagatatgacatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggc 22845465  T
Q  144 ccaatcacgatttctaaga 162  Q
    |||| ||||||||||||||    
T  22845464 ccaaccacgatttctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 35788626 - 35788745
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||||||||| |||||   ||| ||||||||||||||| |||| |||||||| |||||| ||| ||||| ||| |||||||||| |    
T  35788626 tgttaagagtcccacatcagataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggc 35788725  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||||||||||    
T  35788726 ccaaccacgatttctaagat 35788745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 11036629 - 11036509
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| |||||||||   |||| |||| ||||||||||||||| |||| |||| |||| ||||| ||| |||||| || |||||||||||    
T  11036629 gtgttaagagtcccaaatcagataggtgatgacatgacaatgtgtttataagttggggcaatcatcacctcacaagccggttttgcggggttgtgttaga 11036530  T
Q  143 cccaatcacgatttctaagat 163  Q
    ||||| ||| |||||||||||    
T  11036529 cccaaccacaatttctaagat 11036509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 50543690 - 50543565
Alignment:
Q  40 ataaagtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtg 137  Q
    ||||| |||||||||||||| ||| |||||   |||   ||| ||||||| |||||||||||  ||||||||| ||||| ||| ||||||||||||||||    
T  50543690 ataaactgttaagagtcccacatcggataggtgatggcctgacaatgtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtg 50543591  T
Q  138 ttagacccaatcacgatttctaagat 163  Q
    |||| ||||| |||||||||||||||    
T  50543590 ttaggcccaaccacgatttctaagat 50543565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 39902681 - 39902562
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||| |||||   ||| ||||||||||||||| |||| |||||||| |||||| ||  ||||||||| ||||||||||     
T  39902681 gtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttagg 39902582  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||| ||||||||||    
T  39902581 cccaaccaccatttctaaga 39902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 35797096 - 35796975
Alignment:
Q  44 agtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttag 141  Q
    |||||||||||||||||||| || || | |||| |||| ||| ||||||||||| |||| |||||||| ||||||  |||||||||||| |||||||||     
T  35797096 agtgttaagagtcccatatcggacaggagatgacatgacaatatgtttataagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaa 35796997  T
Q  142 acccaatcacgatttctaagat 163  Q
     |||||  || |||||||||||    
T  35796996 gcccaactaccatttctaagat 35796975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 36685992 - 36685873
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| |||| |||  | ||||  ||| ||||||||||||| ||||| | |||||||| ||||| | ||||||||||| ||||| |||||    
T  36685992 gtgttaagagtcccacatca-atatgaaatgacctgacaatgtgtttataaatgggggttatcctcacctcacaagtcagttttgtggggttgtattaga 36685894  T
Q  143 cccaatcacgatttctaagat 163  Q
    ||||| |||||||||||||||    
T  36685893 cccaaccacgatttctaagat 36685873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 22863441 - 22863559
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcactc-acaggccagttttgtggagttgtgttagac 143  Q
    ||||||||||| || ||| || |||| |||   ||| |||||||||||||||||||  ||||||||| | ||| ||| ||||||||| |||||||||| |    
T  22863441 tgttaagagtctcacatcggacagaagatggcctgacaatgtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggc 22863540  T
Q  144 ccaatcacgatttctaaga 162  Q
    |||| ||||||||||||||    
T  22863541 ccaaccacgatttctaaga 22863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 5398555 - 5398474
Alignment:
Q  83 aatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||| ||||| ||||||||| ||||| ||| ||||||||| ||||||||||  |||| || ||||||||||||    
T  5398555 aatgtgtttataactggggcaatcctcacctcacaagccggttttgtggggttgtgttaggtccaaccatgatttctaagat 5398474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 22231427 - 22231306
Alignment:
Q  44 agtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttag 141  Q
    |||||||||||||| | ||| ||||  | ||||  ||| ||| | |||||||||||||  ||||||||| ||||| ||| ||||||||| ||||||||||    
T  22231427 agtgttaagagtcctacatcggatatgatatgacctgagaatatatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 22231328  T
Q  142 acccaatcacgatttctaagat 163  Q
     ||||| |||||||||||||||    
T  22231327 gcccaaccacgatttctaagat 22231306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 44118939 - 44118858
Alignment:
Q  83 aatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||||||| |||||||||| ||||| ||| ||||||||| ||||||||||| || | |||||||| |||||    
T  44118939 aatgtgtttataagtgggggtaatcctcacctcacaagcccgttttgtggggttgtgttagagcccaccacgatttataaga 44118858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 40717324 - 40717268
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg 101  Q
    ||||||||||||||| |||||| |||||||||  ||| |||||||||||||||||||    
T  40717324 gtgttaagagtcccacatcagacagaacatgacctgacaatgtgtttataagtgggg 40717268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 50543448 - 50543328
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcactc-acaggccagttttgtggagttgtgttaga 142  Q
    |||||||||| |||| ||| |||||   ||| | ||| ||||||| |||||||||||  ||||||||| | ||| ||| ||||||||| ||||||||||     
T  50543448 gtgttaagagccccacatcggataggtgatggtctgacaatgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttagg 50543349  T
Q  143 cccaatcacgatttctaagat 163  Q
    ||||| |||||||||||||||    
T  50543348 cccaaccacgatttctaagat 50543328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 6218405 - 6218524
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||||||| || ||||||||| | ||||  | | ||||||||||||||| |||| |||| ||| |||||| ||| ||||| |||| |||||||||     
T  6218405 gtgttaagagtctcacatcagataggagatgacctaacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttatggaattgtgttagg 6218504  T
Q  143 cccaatcacgatttctaaga 162  Q
    | ||| ||||||||||||||    
T  6218505 ctcaaccacgatttctaaga 6218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 21498803 - 21498878
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  21498803 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 21498878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 22231191 - 22231072
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||| | ||| ||||| | |||   ||| |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| ||||| ||||     
T  22231191 gtgttaagagtcctacatcggataggatatggcctgacaatgtgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtattagg 22231092  T
Q  143 cccaatcacgatttctaaga 162  Q
     |||| ||||||||||||||    
T  22231091 tccaaccacgatttctaaga 22231072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 25052860 - 25052935
Alignment:
Q  87 tgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||||||| |||||| ||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  25052860 tgtttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25052935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 28245606 - 28245527
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| |||||  |||||||||||    
T  28245606 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaa 28245527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 35609788 - 35609709
Alignment:
Q  86 gtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||||||  ||||||||| ||||| ||| ||||||||| ||||||| |||||||| || ||||||||||||    
T  35609788 gtgtttataagtggggccaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccatgatttctaagat 35609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 52559571 - 52559654
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagata 164  Q
    |||||||||||||||||||  |||| |||| ||||| ||| ||||||||| |||||||||| ||||| || |||||||||||||    
T  52559571 aatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagata 52559654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 53814750 - 53814675
Alignment:
Q  87 tgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||||||| |||||||||| ||||| ||| |||||||||  ||||||||| ||||| ||||||||||||    
T  53814750 tgtttataagtggggataatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 53814675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 1518172 - 1518250
Alignment:
Q  87 tgtttataagtggggt-aatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||  |||||||| |||||| ||| ||||||||| |||||||||| || || |||||||||||||||    
T  1518172 tgtttataagtgggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagat 1518250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 5398291 - 5398221
Alignment:
Q  83 aatgtgtttataagtggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacg 152  Q
    |||||||||||||| |||| |||||||| |||||| ||| ||||||||| |||||||||| ||||| ||||    
T  5398291 aatgtgtttataagaggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacg 5398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 6218212 - 6218290
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||  |||| |||| ||||| | | |||||||||||||||||||||| ||| |||||||||||||||    
T  6218212 tgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgttagacacaaccacgatttctaagat 6218290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 21684965 - 21685083
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    ||||||||||| || ||| ||||| |||||   ||| |||||||||||||||||| | |||||||| |||||| |||  |||||||| |||||||||  |    
T  21684965 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgggataaatcctcacctcacaagccgattttgtggggttgtgttaagc 21685064  T
Q  144 ccaatcacgatttctaaga 162  Q
    |||| ||| ||||||||||    
T  21685065 ccaaccacaatttctaaga 21685083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 22827545 - 22827623
Alignment:
Q  86 gtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||||  ||||||||| ||||| ||| ||||||| | |||||||||| ||||| ||||||||||||||    
T  22827545 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 40717525 - 40717439
Alignment:
Q  79 tgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||| |||||||||||||||  ||||||||| ||| | | | ||||||||| |||||||||| ||||| |||||||||||||||    
T  40717525 tgataatttgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagat 40717439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 14783304 - 14783188
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| | ||| |  |||| ||| ||| ||||||||| || ||| |||| |||| ||||| ||| ||||||||| |||||||||| |    
T  14783304 tgttaagagtcccacatcggttaggagttgatctgacaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggc 14783205  T
Q  144 ccaatcacgatttctaa 160  Q
    |||| ||||||||||||    
T  14783204 ccaaccacgatttctaa 14783188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 9685640 - 9685715
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||| ||| |||||||||| ||||| ||||||||||||    
T  9685640 tgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaa 9685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 21498362 - 21498437
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| ||| |||||| ||||| ||||||||||||    
T  21498362 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaa 21498437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 35645882 - 35645763
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| |||  ||||   ||| | ||| |||||||||||||||||||  ||||||||| ||||| ||||||||| | | |||||||||| |    
T  35645882 tgttaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccagttttttagggttgtgttaggc 35645783  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||||   ||||||||||||    
T  35645782 ccaattgtgatttctaagat 35645763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 35796860 - 35796741
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||| ||| ||| || || |||||  |||| ||||||||||||||| |||| |||||||| |||||| ||| ||||||||  |||||||||      
T  35796860 gtgttaagagttccacatcggacaggacatggcatgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtgttaag 35796761  T
Q  143 cccaatcacgatttctaaga 162  Q
     |||| ||| ||||||||||    
T  35796760 tccaaccaccatttctaaga 35796741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 22445415 - 22445538
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatga---taatgtgtttataagtggggt--aatcctcactc-acaggccagttttgtggagttgtgtt 139  Q
    ||||||||||| |||||| ||||| | ||||| |||   |||||||||||| |||||||   ||||||||| | ||| | | ||||||||| ||||||||    
T  22445415 tgttaagagtctcatatctgataggagatgatctgacattaatgtgtttattagtggggggcaatcctcaccctacaagtcggttttgtggggttgtgtt 22445514  T
Q  140 agacccaatcacgatttctaagat 163  Q
    |||||||| ||| | |||||||||    
T  22445515 agacccaaccacaaattctaagat 22445538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 34358110 - 34358028
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||| |||||  ||||||||| ||| | ||| ||||||||| |||||||||| | ||| |||||||||||||||    
T  34358110 aatgtgtttataaatgggggcaatcctcacatcagaagccggttttgtggggttgtgttaggctcaaacacgatttctaagat 34358028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 35609567 - 35609489
Alignment:
Q  86 gtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||||  ||||||||| ||||| | | ||||||||| ||||||| | |||||| ||||||||||||||    
T  35609567 gtgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgtaacacccaaccacgatttctaaga 35609489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 12869302 - 12869261
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  12869302 gttttgtggggttgtgttaggcccaaccacgatttctaagat 12869261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 17111608 - 17111649
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  17111608 gttttgtggggttgtgttaggcccaaccacgatttctaagat 17111649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 18528297 - 18528212
Alignment:
Q  83 aatgtgtttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagataaa 166  Q
    ||||||||||||||||| || ||||||||| |||||   |  |||||| | ||||||||||| |||| ||||||||||||||||||    
T  18528297 aatgtgtttataagtggcggcaatcctcacctcacaaatcgattttgtagggttgtgttagatccaaccacgatttctaagataaa 18528212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 21750352 - 21750275
Alignment:
Q  87 tgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||| | || |||| ||||| |||||  |||||||||||  |||||||||||||||||||||| || ||||||    
T  21750352 tgtttataaattggataattctcacctcacaaaccagttttgtgaggttgtgttagacccaatcacgaattttaagat 21750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 400682 - 400586
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgtta 140  Q
    ||||||||||| || ||||||||  | ||| | ||| ||||||||||||||| |||| |||||||| |||||| ||| ||||||||  |||||||||    
T  400682 tgttaagagtctcacatcagatatgagatggtctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgtta 400586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 26549641 - 26549720
Alignment:
Q  84 atgtgtttataagtggg--gtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||||  |||||||| | |||||| ||| ||||||||| ||||||| ||  ||||||| |||||||||    
T  26549641 atgtgtttataagtggggagtaatccttatctcacaagccggttttgtggtgttgtgtcaggtccaatcatgatttctaa 26549720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 27634199 - 27634143
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg 101  Q
    ||||||||||||||| ||| ||||| |||||   ||| |||||||||||||||||||    
T  27634199 gtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggg 27634143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 35819178 - 35819126
Alignment:
Q  111 ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||| ||||||||||||  |||||||||| ||||| |||||||| ||||||    
T  35819178 ctcacaagccagttttgtgaggttgtgttaggcccaaccacgatttttaagat 35819126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 43743264 - 43743304
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||| |||||||||||||||| ||||||||| ||||    
T  43743264 gttttgtggggttgtgttagacccaaacacgatttccaaga 43743304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 16419468 - 16419587
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||| ||||| | ||| ||||||||||||||| |||| |||||||| |||||| ||| ||||||||| ||||||||||     
T  16419468 gtgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 16419567  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  16419568 cccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 2029736 - 2029855
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgg-ggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| ||||| ||||||  ||| ||||||||||||||||| || |||||||| |||||| ||| ||||||||| ||||| |||| |    
T  2029736 tgttaagagtcccacatcggataggacatgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggc 2029835  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||||||||||    
T  2029836 ccaaccacgatttctaagat 2029855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 25082655 - 25082536
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||||||| |||||||||||  | ||| | ||| ||||||||||||||| |||| |||| |||| ||||| ||||||||||||| ||||||||||     
T  25082655 gtgttaagagtctcatatcagataagagatggtctgacaatgtgtttataagtaggggcaatcatcacctcacaagccagttttgtggggttgtgttagg 25082556  T
Q  143 cccaatcacgatttctaaga 162  Q
     |||| ||||||||||||||    
T  25082555 tccaaccacgatttctaaga 25082536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 32356380 - 32356469
Alignment:
Q  73 atgatatgataatgtgtttataagtggggt-aatcctcactcacaggccagttttgtggagttgtgttagacccaatcacgatttctaag 161  Q
    |||| |||| |||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||||| |||||  |||| |||||||    
T  32356380 atgacatgacaatgtgtttataagtgggggcaatcctcacccacaagccagttttgtggagttgtgttaggcccaactacgaattctaag 32356469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 2029970 - 2030090
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| || |  ||||||  ||| ||||||||||||||||| || ||||||||| ||||| ||| ||||||||| ||||| ||||     
T  2029970 gtgttaagagtcccacatcggacatgacatgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttagg 2030069  T
Q  143 cccaatcacgatttctaagat 163  Q
    ||||| |||||||||||||||    
T  2030070 cccaaccacgatttctaagat 2030090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 15124666 - 15124547
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||||||||| | ||| ||| |||||||||||||||  ||||| ||| ||| | |||  |||||||| |||||||||||    
T  15124666 gtgttaagagtcccacatcggatagaacatggtctgacaatatgtttataagtgggggcaatccccacctcataagccgattttgtggggttgtgttaga 15124567  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| |||||||| |||||    
T  15124566 cccaaccacgatttttaaga 15124547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 28407869 - 28407791
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||  ||||||||| ||||| ||| |||||||||||||||||||| ||||| |||||||||||||||    
T  28407869 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagat 28407791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 33606369 - 33606287
Alignment:
Q  83 aatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||| |||||| | ||| |||||||||||||||    
T  33606369 aatgtgtttataagtgggggtaatcctcacctcacaagccagttttgtggcgttatgttaggcacaaccacgatttctaagat 33606287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 40379522 - 40379442
Alignment:
Q  85 tgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  40379522 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 40379442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 5711557 - 5711438
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| || || | |||   ||| |||||||||||||||||||  ||||||||| | ||| ||| ||||||||| ||||||||||     
T  5711557 gtgttaagagtcccacatcggaaaggaaatggcctgacaatgtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttagg 5711458  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  5711457 cccaaccacgatttctaaga 5711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 14466527 - 14466408
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggg-gtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || |||||   ||| |||||||||||||||||| | ||||||||| | ||| ||| ||||||||| |||||||||| |    
T  14466527 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggc 14466428  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||||||||||    
T  14466427 ccaaccaccatttctaagat 14466408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 40379287 - 40379208
Alignment:
Q  85 tgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||||    
T  40379287 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 160
Target Start/End: Complemental strand, 17855052 - 17854930
Alignment:
Q  40 ataaagtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtg 137  Q
    ||||||||||||||||| || ||| | ||| |  |||  ||| ||| |||||||||||| ||| ||||||||| ||||| ||| ||||||||| ||||||    
T  17855052 ataaagtgttaagagtctcacatcggttaggagttgacctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtg 17854953  T
Q  138 ttagacccaatcacgatttctaa 160  Q
     ||||||||| ||||||||||||    
T  17854952 ctagacccaaccacgatttctaa 17854930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 19191686 - 19191605
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagataaa 166  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||||||||| |||||    
T  19191686 tgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatataaa 19191605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 33606172 - 33606056
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||| | |||   ||| ||||||||||||||| |||| ||||||||| |||||  || |||||||||| || |||||||    
T  33606172 gtgttaagagtcccacatcggataggagatggcctgaaaatgtgtttataagtaggggcaatcctcacctcacaaaccggttttgtggaatt-tgttaga 33606074  T
Q  143 cccaatcacgatttctaa 160  Q
    ||||| ||||||||||||    
T  33606073 cccaaccacgatttctaa 33606056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 12343867 - 12343751
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| ||||| | ||| |  || |||||| ||||||||||||  ||||||||| ||| | | ||||||||||| ||||||||||||    
T  12343867 tgttaagagtcccacatcggataggagatggtcagacaatgtgcttataagtgggggcaatcctcacatcataagtcagttttgtggggttgtgttagac 12343768  T
Q  144 ccaatcacgatttctaa 160  Q
    |||| |||| |||||||    
T  12343767 ccaaccacggtttctaa 12343751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 15124901 - 15124781
Alignment:
Q  46 tgttaagagtcccatatcagataga-acatgatatgataatgtgtttataagtg-gggtaatcctcact-cacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||| || |||||||  | ||||| ||||| | |||||||||||||| ||| |||| ||||| ||||   | ||||||||| |||||||||||    
T  15124901 tgttaagagtctcacatcagattaagacatggtatgacagtgtgtttataagtgagggcaatcttcacttcacaattcggttttgtggggttgtgttaga 15124802  T
Q  143 cccaatcacgatttctaagat 163  Q
    ||||| |||||||||||||||    
T  15124801 cccaaccacgatttctaagat 15124781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 3738900 - 3738955
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg 101  Q
    |||||||||||| | ||| ||||||| |||| ||||||||||||||||||||||||    
T  3738900 tgttaagagtccaacatcggatagaagatgacatgataatgtgtttataagtgggg 3738955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 9927873 - 9928002
Alignment:
Q  43 aagtgttaagagtccca--tatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgt 138  Q
    |||||||||||||||||  |||| ||||||| ||| | ||| ||||||||||||||| ||||||||||||| |||||| ||   |||| ||| |||||||    
T  9927873 aagtgttaagagtcccaaatatcggatagaagatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagctgattttttggggttgtgt 9927972  T
Q  139 tagacccaatcacgatttctaagataaagt 168  Q
    ||   |||| ||||| ||||||||| ||||    
T  9927973 tacgtccaaccacgaattctaagattaagt 9928002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 164
Target Start/End: Complemental strand, 5711793 - 5711672
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| || || |||||   ||| |||||||||||||||||||  |||| |||| | | | ||| ||||||||| ||||||||||     
T  5711793 gtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttagg 5711694  T
Q  143 cccaatcacgatttctaagata 164  Q
    ||||| ||| ||||||||||||    
T  5711693 cccaaccaccatttctaagata 5711672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 19544454 - 19544369
Alignment:
Q  79 tgataatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||||||  |  ||||| ||||| ||| ||||||||||| | ||||||  |||| |||||||||||||||    
T  19544454 tgataatgtgtttataagtgggggcaatctcacctcacaagccggttttgtggagctatgttaggtccaaccacgatttctaagat 19544369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 27897681 - 27897604
Alignment:
Q  87 tgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||||| ||| ||||| ||||| | | ||||||||| |||||||||| ||||| ||| |||||||||||    
T  27897681 tgtttataagtggggcaattctcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagat 27897604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 161
Target Start/End: Original strand, 29718291 - 29718412
Alignment:
Q  42 aaagtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtgtt 139  Q
    |||||||||||||||||| ||| | ||| |  ||   ||| ||| |||||||||||| ||| ||||||||| ||||| ||| ||||||||| ||||||||    
T  29718291 aaagtgttaagagtcccacatcggttaggagttggcttgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgtt 29718390  T
Q  140 agacccaatcacgatttctaag 161  Q
    || || || |||||||||||||    
T  29718391 aggcctaaccacgatttctaag 29718412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 36316169 - 36316052
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||||| |||||  ||   ||| ||| |||||||||||||||  ||||||||| | ||| ||||||||||||| ||| ||||||     
T  36316169 gtgttaagagtcccacatcagttagaagttggcctgacaatttgtttataagtgggggcaatcctcacattacaagccagttttgtggggttatgttagg 36316070  T
Q  143 cccaatcacgatttctaa 160  Q
     |||| ||||||||||||    
T  36316069 tccaaccacgatttctaa 36316052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 17719367 - 17719486
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| |||||   |||   ||| |||||||||||||||||||  ||||||||| ||||| ||| ||||||| | |||||||| | |    
T  17719367 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggc 17719466  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||||||||||    
T  17719467 ccaaccacaatttctaagat 17719486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 21840323 - 21840402
Alignment:
Q  85 tgtgtttataagtggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||||||| | ||| || |||  |||||||| ||||||||| || |||  ||||||||||||||    
T  21840323 tgtgtttataagtggggtaatcctaacctcccaagccgattttgtggcgttgtgttaaacacaactacgatttctaagat 21840402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 37840304 - 37840423
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgg-ggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||  ||||| | ||||  ||| ||||||||||||||||| || |||| ||| |||||| ||| ||||||||| |||||||| | |    
T  37840304 tgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtggaggcaatcatcacctcacaagccggttttgtggggttgtgttgggc 37840403  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||| ||||||    
T  37840404 ccaaccacaatttttaagat 37840423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 5206706 - 5206784
Alignment:
Q  87 tgtttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||| ||||||| |||| | ||| | ||||||||||  ||||||| |||| |||||||||||||||||||    
T  5206706 tgtttataagtggaggtaatcttcaccttacaagtcagttttgtgaggttgtgtaagactcaatcacgatttctaagat 5206784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 93666 - 93625
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  93666 gttttgtggggttgtgttaggcccaaccacgatttctaagat 93625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 14927301 - 14927378
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||||  ||||||||| ||| | |||  |||||||||||||| ||||||||||||||  |||||||||    
T  14927301 tgtttataagtgggggcaatcctcacctcataagccgattttgtggagttgtattagacccaatcacagtttctaaga 14927378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 40149121 - 40149004
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||||||| || ||| ||||||| ||||  | | | |||||||||||||||||  |||||||| |||||| |||  |||||||| ||||||||||     
T  40149121 gtgttaagagtctcacatcggatagaagatgacctaacagtgtgtttataagtggggacaatcctcacctcacaagccgattttgtggggttgtgttagg 40149022  T
Q  143 cccaatcacgatttctaa 160  Q
     |||| || |||||||||    
T  40149021 tccaaccatgatttctaa 40149004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 14927106 - 14927190
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagataa 165  Q
    |||||||||||||||||||  ||||||||| ||| | | ||| ||||||  |||||||||| | ||| |||||||||||||||||    
T  14927106 aatgtgtttataagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaaccacgatttctaagataa 14927190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 16419301 - 16419353
Alignment:
Q  111 ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||| ||| ||||||||| ||||| |||| ||||| |||||||||||||||    
T  16419301 ctcacaagccggttttgtggggttgtattaggcccaaccacgatttctaagat 16419353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 16533551 - 16533615
Alignment:
Q  83 aatgtgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagaccc 145  Q
    ||||||||||||||| |||| ||||||||| ||||| ||| ||||||||  ||||||||||||||    
T  16533551 aatgtgtttataagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttagaccc 16533615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 17719611 - 17719651
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||| |||||||||| ||||| ||||||||||||||    
T  17719611 gttttgtggggttgtgttaggcccaaccacgatttctaaga 17719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 17854768 - 17854684
Alignment:
Q  87 tgtttataagtggggt-aatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagataaagta 169  Q
    |||||||||||||||  |||| ||| |||||| | | |||||||||  ||||||||| ||||| |||||||||||| ||||||||    
T  17854768 tgtttataagtgggggcaatcatcatctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaatataaagta 17854684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 19571053 - 19570973
Alignment:
Q  84 atgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||||||  ||||||||| ||| | | |  ||||||||| ||||||||| ||||| ||||||||||||||    
T  19571053 atgtgtttataagtgggggcaatcctcacctcataagtcgattttgtggaattgtgttaggcccaaccacgatttctaaga 19570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 24395868 - 24395948
Alignment:
Q  83 aatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||| ||||||| ||||||||| |||||   |  |||||||| |||||||||| || || ||||||||||||||    
T  24395868 aatgtgtttatgagtggggcaatcctcacctcacaaatcgattttgtggggttgtgttaggccaaaccacgatttctaaga 24395948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 37770060 - 37769948
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| | ||| |  || | ||| ||| |||||||||||||||  |||| |||| ||| | ||| ||||||||| ||||||||||||    
T  37770060 tgttaagagtcccacatcggttaggagttggtttgacaatttgtttataagtgggggcaatcttcacctcataagccggttttgtggggttgtgttagac 37769961  T
Q  144 ccaatcacgattt 156  Q
    |||| ||||||||    
T  37769960 ccaaccacgattt 37769948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 37812386 - 37812330
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg 101  Q
    ||||||||||||||| ||| ||||| |||||   ||| |||||||||||||||||||    
T  37812386 gtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggg 37812330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 37812616 - 37812560
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg 101  Q
    ||||||||||||||| ||| ||||  ||||||  ||| |||||||||||||||||||    
T  37812616 gtgttaagagtcccacatcggataagacatgacctgacaatgtgtttataagtgggg 37812560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 54368481 - 54368602
Alignment:
Q  44 agtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttag 141  Q
    |||||||||||||||| ||| ||||||| |||   ||| |||||||||||||||||||  ||||||||| ||||| ||| ||||| ||| ||||||||||    
T  54368481 agtgttaagagtcccacatccgatagaagatggcctgaaaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttag 54368580  T
Q  142 acccaatcacgatttctaagat 163  Q
    |||||| |||||||||||||||    
T  54368581 acccaaccacgatttctaagat 54368602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 16927066 - 16926947
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| |||||||||||   ||| ||||||||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||  |    
T  16927066 tgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaagc 16926967  T
Q  144 ccaatcacgatttctaagat 163  Q
     ||| |||||||||||||||    
T  16926966 tcaaccacgatttctaagat 16926947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 54567859 - 54567978
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaa-tcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||| ||||| ||||| |||||   ||| ||||||||||||||||||| || ||||||| ||||| ||| ||||||||| |||||||||| |    
T  54567859 tgttaagagtcctatatcggataggacatggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggc 54567958  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||||||||||    
T  54567959 ccaaccacgatttctaagat 54567978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 31317432 - 31317551
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||| | ||| ||||| |||||| |||| |||||||||||||||||||  |||| ||| |||||| |||  ||||| || ||||||||||     
T  31317432 gtgttaagagtcctacatcggataggacatgacatgacaatgtgtttataagtggggaaaatcatcacctcacaagccgattttgcggggttgtgttagg 31317531  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  31317532 cccaaccacgatttctaaga 31317551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 35038312 - 35038193
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaa-tcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| |||||   |||   ||| ||||||||||||||||||| || ||||||| ||||| ||| ||||||||| ||||||||||     
T  35038312 gtgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttagg 35038213  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  35038212 cccaaccacgatttctaaga 35038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 31317196 - 31317314
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacc 144  Q
    |||||||||||||| ||| ||||  ||||   |||  ||||||||||||||||||| |||||||| |||||| ||| |||||||||  ||||||||| |     
T  31317196 tgttaagagtcccacatcggataagacatagcatggcaatgtgtttataagtggggcaatcctcacctcacaagccggttttgtgggattgtgttaggct 31317295  T
Q  145 caatcacgatttctaagat 163  Q
    ||| |||||||||||||||    
T  31317296 caaccacgatttctaagat 31317314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 16239556 - 16239677
Alignment:
Q  44 agtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttag 141  Q
    ||||||||||||| || ||| ||||| |||||   ||| |||||||||||||||||||  || |||||| ||||| ||| |||||||||  |||||||||    
T  16239556 agtgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgttag 16239655  T
Q  142 acccaatcacgatttctaagat 163  Q
     ||||| |||||||||||||||    
T  16239656 gcccaaccacgatttctaagat 16239677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 1723152 - 1723074
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  1723152 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 1723074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 13575000 - 13574922
Alignment:
Q  84 atgtgtttataagtggggtaa-tcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||||| || ||||||| ||||| ||||||||||||| |||||||||| ||||| ||| ||||||||    
T  13575000 atgtgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaa 13574922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 17638243 - 17638320
Alignment:
Q  87 tgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||||| ||||||||| ||||| ||  |||||| || |||||||||| ||||| |||||||||||||||    
T  17638243 tgtttataagtggggcaatcctcacctcacaagctggttttgaggggttgtgttaggcccaaccacgatttctaagat 17638320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 156
Target Start/End: Complemental strand, 20327732 - 20327619
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||| ||||| ||| ||||| |||||   ||| ||||| ||||||||| |||| |||||||| |||||| ||| ||||||||| ||||||||||     
T  20327732 gtgttaagaatcccacatcggataggacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 20327633  T
Q  143 cccaatcacgattt 156  Q
    ||||| ||||||||    
T  20327632 cccaaccacgattt 20327619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 8018934 - 8019054
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggg-gtaatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| | |||||  ||   ||| ||| |||||||||||||| | ||||||||| ||||| ||| ||||||||| ||||||||||     
T  8018934 gtgttaagagtcccacatcggttagaagttggcctgaaaatttgtttataagtgggtgcaatcctcacctcacaagccggttttgtggggttgtgttagg 8019033  T
Q  143 cccaatcacgatttctaagat 163  Q
    ||||| ||| |||||||||||    
T  8019034 cccaaccacaatttctaagat 8019054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 39620292 - 39620412
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||||||| || ||| |||||   ||||  ||| ||||||||||||||||||| ||| || ||| ||| | ||||||||||||| |||||||||      
T  39620292 gtgttaagagtctcacatcggataggtgatgacctgacaatgtgtttataagtgggggtaacccgcacctcataagccagttttgtggggttgtgttaag 39620391  T
Q  143 cccaatcacgatttctaagat 163  Q
    ||||| |||||||||||||||    
T  39620392 cccaaccacgatttctaagat 39620412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 50052619 - 50052540
Alignment:
Q  84 atgtgtttataagtggggt--aatcctcact-cacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||||||||||   |||||||||| |||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  50052619 atgtgtttataagtggggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 50052540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 4155331 - 4155410
Alignment:
Q  86 gtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||||||  ||||||||| ||| | ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  4155331 gtgtttataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 4155410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 11589793 - 11589868
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  11589793 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 11589868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 17638374 - 17638490
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    ||||||||||||||| ||| | |||||  ||   ||| ||| ||||||||||||||| |||||||| |||||| ||| ||||| |||  ||||||||| |    
T  17638374 gtgttaagagtcccacatcggttagaagctggcctgacaatttgtttataagtggggcaatcctcatctcacaagccggttttatgg--ttgtgttaggc 17638471  T
Q  144 ccaatcacgatttctaaga 162  Q
    ||||||||||||| |||||    
T  17638472 ccaatcacgatttttaaga 17638490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 22729067 - 22729186
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcact-cacaggccagttttgtggagttgtgttagac 143  Q
    |||| ||||||||| ||| ||||| | ||| | ||| |||||||||| ||||||||  |||||||||| |||| ||| ||||||||  |||||||||| |    
T  22729067 tgttcagagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggc 22729166  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||||||||||    
T  22729167 ccaaccacaatttctaagat 22729186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 24866222 - 24866289
Alignment:
Q  103 aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagataaagta 169  Q
    ||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||| ||||    
T  24866222 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatatagta 24866289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 45139048 - 45138969
Alignment:
Q  86 gtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||| ||||||||||  ||||||||| ||||| ||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  45139048 gtgttaataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaagat 45138969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 3975438 - 3975356
Alignment:
Q  83 aatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||||||||| ||||| |||| || || |||  ||||||||| ||||||||||||||| ||| |||||||||||    
T  3975438 aatgtgtttataagtggggataatcatcacctctcaagccgattttgtggaattgtgttagacccaaccactatttctaagat 3975356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 23610448 - 23610391
Alignment:
Q  86 gtgtttataagtgggg-taatcctca-ctcacaggccagttttgtggagttgtgttag 141  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||    
T  23610448 gtgtttataagtgggggtaatcctcaactcacaggccggttttgtggggttgtgttag 23610391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 45138882 - 45138805
Alignment:
Q  83 aatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttct 158  Q
    ||||||||||||||| |||| |||||||| |||||| ||| ||||||||| ||||| | |||||||| ||||||||||    
T  45138882 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtatgagacccaaccacgatttct 45138805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 2806365 - 2806285
Alignment:
Q  84 atgtgtttataagtggg-gtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||||| | ||||||||| ||||| ||||||||||||| ||| |||||| ||| | ||| ||||||||||    
T  2806365 atgtgtttataagtgggtggaatcctcacctcacaagccagttttgtggggttttgttaggccccaacacaatttctaaga 2806285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 28087265 - 28087213
Alignment:
Q  111 ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||| ||| |||||||||  |||||| ||||||||||||||||||||||||    
T  28087265 ctcacaagccggttttgtgggattgtgtcagacccaatcacgatttctaagat 28087213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 34610527 - 34610646
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt--aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||||||||| |  |  ||   ||| ||| |||||||||||||||   ||||||||| ||||| | | ||||||||| |||||||||||    
T  34610527 tgttaagagtcccatatcagacatgagttggcctgacaatatgtttataagtggggggcaatcctcacctcacaagtcggttttgtggggttgtgttaga 34610626  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||| ||||||||||    
T  34610627 cccaaccacaatttctaaga 34610646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 43781568 - 43781668
Alignment:
Q  64 agatagaacatgatatgataatgtgtttataagtgg-ggtaatcctcact-cacaggccagttttgtggagttgtgttagacccaatcacgatttctaag 161  Q
    |||||||| ||||  ||| |||| |||||||||||| || |||||||||| |||| | | ||||||| |||||||||||| ||||| ||| |||||||||    
T  43781568 agatagaagatgacctgacaatgagtttataagtggaggcaatcctcacttcacaagtcggttttgtagagttgtgttaggcccaaccacaatttctaag 43781667  T
Q  162 a 162  Q
    |    
T  43781668 a 43781668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 4155525 - 4155644
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| |||  |||| ||| |   ||| |||||||||||||||||||  ||||||||| ||| | ||| ||||| | | ||||||||||     
T  4155525 gtgttaagagtcccacatcgcataggacaaggcctgacaatgtgtttataagtggggacaatcctcacctcaaaagccggttttttagggttgtgttagg 4155624  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  4155625 cccaaccacgatttctaaga 4155644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 26753560 - 26753517
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaagataa 165  Q
    |||||||||| |||| |||||||||| |||||||||||||||||    
T  26753560 gttttgtggaattgtattagacccaaccacgatttctaagataa 26753517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 30179821 - 30179706
Alignment:
Q  50 aagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaa 147  Q
    |||||||||| ||||||||  | ||||  ||| ||||||||||||||| ||||||||||||| |||||| | ||||||||| |  || |||||  |||||    
T  30179821 aagagtcccacatcagataagagatgacctgacaatgtgtttataagtgggggtaatcctcacctcacaagtcagttttgtaggattatgttatgcccaa 30179722  T
Q  148 tcacgatttctaagat 163  Q
     |||||||| ||||||    
T  30179721 ccacgatttataagat 30179706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 35038545 - 35038426
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| |||||   |||   ||| ||||||||||||||| |||| |||||||| || ||| ||  ||||||||| |||||||||| |    
T  35038545 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggc 35038446  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||||| |||||||||    
T  35038445 ccaaccacgacttctaagat 35038426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 39620099 - 39620178
Alignment:
Q  85 tgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||||||||| ||||||| ||||| ||| ||||||  |||||||||||    ||| |||||||||||||||    
T  39620099 tgtgtttataagtggggtagtcctcacttcacaagccggttttgaagagttgtgttaagttcaaccacgatttctaagat 39620178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 2123774 - 2123840
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctcac 111  Q
    ||||||||||| ||  || ||||| ||||||| |||||||||||||||||||| ||| |||||||||    
T  2123774 tgttaagagtctcacgtcggataggacatgatctgataatgtgtttataagtgagggcaatcctcac 2123840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 50083161 - 50083079
Alignment:
Q  83 aatgtgtttataagtggggtaa-tcctcac-tcacaggccagttttgtggag-ttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||||||| || ||||||| ||||| ||| ||||||||| | ||||||||| ||||| || |||||||||||    
T  50083161 aatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgggggttgtgttaggcccaaccatgatttctaaga 50083079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 472140 - 472059
Alignment:
Q  83 aatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||| |||| |||||| | |||||| ||| ||||||||| |||||||||| || || ||||||||| ||||    
T  472140 aatgtgtttataagtgggggcaatccttacctcacaagccggttttgtggggttgtgttaggccaaaccacgatttcaaaga 472059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 13741182 - 13741106
Alignment:
Q  83 aatgtgtttataagtggggt--aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgattt 156  Q
    |||||||||||||||||||   ||||||||| ||||| ||| ||||| ||| |||||||||||||||| ||| ||||    
T  13741182 aatgtgtttataagtggggacaaatcctcacctcacaagccggttttttggggttgtgttagacccaaccacaattt 13741106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 27086635 - 27086676
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||| ||||| || ||||||||||||    
T  27086635 gttttgtggagttgtgttaggcccaaccatgatttctaagat 27086676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 29215707 - 29215590
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||| | || |||||||| ||| || || ||| ||||||||||| |||| ||||||||  ||| | ||||||||| | ||| ||||||||     
T  29215707 gtgttaagagtccaacattagatagaagatggtacgacaatatgtttataagtgggggcaatcctcatatcataagccagttttatagagctgtgttagg 29215608  T
Q  143 cccaatcacgatttctaa 160  Q
     |||| ||||||||||||    
T  29215607 tccaaccacgatttctaa 29215590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 33205490 - 33205547
Alignment:
Q  103 aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttcta 159  Q
    ||||||||| ||||| |||||||||| || |||||||||| ||||| |||||||||||    
T  33205490 aatcctcacctcacaagccagttttgcggggttgtgttaggcccaaccacgatttcta 33205547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 46794058 - 46794139
Alignment:
Q  83 aatgtgtttataagtggggtaatcctcactc-acaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||||||| | |||| |||| | | ||| ||||||| |||||||||||||||   || |||||||||||||||    
T  46794058 aatgtgtttataagtggagcaatcatcaccccataggtcagttttatggagttgtgttagatataaccacgatttctaagat 46794139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 13574734 - 13574686
Alignment:
Q  111 ctcacaggccagttttgtggagttgtgttagacccaatcacgatttcta 159  Q
    |||||| ||| ||||||||| |||||||||| ||||| |||||||||||    
T  13574734 ctcacaagccggttttgtggggttgtgttaggcccaaccacgatttcta 13574686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 18757847 - 18757927
Alignment:
Q  84 atgtgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||| ||||  |||||||| ||||| | | ||||||||| |||||||||| ||||| ||||||||| ||||    
T  18757847 atgtgtttataagtgggggcgatcctcacatcacaaggcggttttgtggggttgtgttaggcccaaccacgatttccaaga 18757927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 26272362 - 26272322
Alignment:
Q  123 ttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||| |||||||||||||||| ||| |||||||||||    
T  26272362 ttttgtggggttgtgttagacccaaccacaatttctaagat 26272322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 29089895 - 29089935
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  29089895 gttttgtggagttgtgttagacccaattataatttctaaga 29089935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 33640079 - 33640131
Alignment:
Q  111 ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||| ||| |||||||||  ||||||||| ||||||||| |||||||||||    
T  33640079 ctcacaagccggttttgtgggattgtgttaggcccaatcacaatttctaagat 33640131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 39269297 - 39269417
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||  || || ||||| | ||| ||||||||||||||| |||| |||||||| |||||| ||| |||||| ||  |||||||||     
T  39269297 gtgttaagagtcccacattggagagcacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgagggattgtgttagg 39269396  T
Q  143 cccaatcacgatttctaagat 163  Q
    || ||  ||||||| ||||||    
T  39269397 cctaactacgatttttaagat 39269417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 12688039 - 12688158
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||| |||||||  ||||||| || || || |||||||||||||||||||| ||| ||||| ||| ||||| ||| ||||||||||||| ||||||||    
T  12688039 tgttaaaagtcccacgtcagataaaagataatctgataatgtgtttataagtgagggcaatccccacctcacaagccggttttgtggagttatgttagac 12688138  T
Q  144 ccaatcacgatttctaagat 163  Q
     ||| |||||||||||||||    
T  12688139 tcaaacacgatttctaagat 12688158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 25325613 - 25325731
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggg-gtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| ||||| |||||   | | |||||||||||||||||| | ||||||| | ||||| ||||||||||||||||||| |||| |    
T  25325613 tgttaagagtcccacatcggataggacatggcctaacaatgtgtttataagtgggtgcaatcctctcctcacaagccagttttgtggagttgttttaggc 25325712  T
Q  144 ccaatcacgatttctaaga 162  Q
    |||| ||||||||||||||    
T  25325713 ccaaccacgatttctaaga 25325731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 5932067 - 5931948
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||||||||| |||||   ||| ||||||||||||||| |||| |||||||| |||||| ||| ||||||||| ||| ||||||     
T  5932067 gtgttaagagtcccacatcagatagtacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttagg 5931968  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||| |||| |||||    
T  5931967 cccaaccaccatttttaaga 5931948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 11232546 - 11232427
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || ||||| | ||| ||||||||||||||| |||| |||||||| || ||| ||| ||||||||| |||||||||| |    
T  11232546 tgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 11232447  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||||||||||    
T  11232446 ccaaccaccatttctaagat 11232427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 39960157 - 39960277
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt--aatcctcac-tcacaggccagttttgtggagttgtgttag 141  Q
    ||||||||||||||| ||| ||||| | |||   ||| ||| |||||||||||||||   ||||||||| ||||| ||| ||||||||| ||||||||||    
T  39960157 gtgttaagagtcccacatcggataggagatggcctgaaaatttgtttataagtggggggcaatcctcacctcacaagccggttttgtggggttgtgttag 39960256  T
Q  142 acccaatcacgatttctaaga 162  Q
     ||||| ||||||||||||||    
T  39960257 gcccaaccacgatttctaaga 39960277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 11232312 - 11232192
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| || || |||||   ||| |||||||||||||||||||  ||||||||| | ||| ||| ||||||||| ||||||||||     
T  11232312 gtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttagg 11232213  T
Q  143 cccaatcacgatttctaagat 163  Q
    ||||| ||| |||||||||||    
T  11232212 cccaaccaccatttctaagat 11232192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 34653117 - 34653233
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||| || ||| | ||| |  |||| ||| ||| |||||||||||| ||||||||| || ||||| ||| ||||||||| |||||||||| |    
T  34653117 gtgttaagagtctcacatcggttaggagttgatctgacaatttgtttataagtgaggtaatcctaacatcacaagccggttttgtggggttgtgttaggc 34653216  T
Q  144 ccaatcacgatttctaa 160  Q
    |||| ||||||||||||    
T  34653217 ccaaccacgatttctaa 34653233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 24532538 - 24532419
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| ||||| | |||   ||| |||||||||||||||||||  |||| |||| ||||| ||| ||||||||| |||||||||| |    
T  24532538 tgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggc 24532439  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| || ||||||||||||    
T  24532438 ccaaccatgatttctaagat 24532419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 35682899 - 35682780
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||| ||| ||| || || |||||   ||| |||||||||||||||||||  ||||||||| || || ||| ||||||||| ||||||||||     
T  35682899 gtgttaagagttccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttagg 35682800  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  35682799 cccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 37001471 - 37001550
Alignment:
Q  86 gtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  37001471 gtgtttataagtggggacaatcctcacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 37001550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 39053046 - 39052927
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| |||||   |||   ||| |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| |    
T  39053046 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 39052947  T
Q  144 ccaatcacgatttctaagat 163  Q
    ||||  ||||||||||||||    
T  39052946 ccaacaacgatttctaagat 39052927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 8084131 - 8084213
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||| |||||||||||||  ||||||||| ||||| ||  |||||| ||||||||||||||||||| |||||||||||||||    
T  8084131 aatgtatttataagtgggggcaatcctcacctcacaagctggttttgcggagttgtgttagacccaaccacgatttctaagat 8084213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 12547062 - 12547188
Alignment:
Q  42 aaagtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgtta 140  Q
    |||||||||||||||||| ||| | ||| |  || | ||| ||| | ||||||||||||| |||| |||| ||||| ||| ||||||||| |||||||||    
T  12547062 aaagtgttaagagtcccacatcggttaggagttggtctgacaatttatttataagtggggcaatcttcacctcacaagccggttttgtggggttgtgtta 12547161  T
Q  141 gacccaatcacgatttctaagataaag 167  Q
    | |||||  ||||||||||||| ||||    
T  12547162 ggcccaactacgatttctaagagaaag 12547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 422335 - 422218
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||| ||||||| ||| ||||| | ||| | ||| |||||||||| |||||| || ||||||||| ||||| ||||||||||||| ||| ||||||     
T  422335 gtgttaaaagtcccacatcggataggagatggtctgacaatgtgtttaaaagtggaggcaatcctcacctcacaagccagttttgtggggttatgttagg 422236  T
Q  143 cccaatcacgatttctaa 160  Q
    || || ||||||||||||    
T  422235 ccaaaccacgatttctaa 422218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 10884068 - 10884150
Alignment:
Q  83 aatgtgtttataagtggggt--aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||   ||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  10884068 aatgtgtttataagtggggggcaatcctcacctcacaagccggttttgtgg-gttgtgttaggcccaaccacgatttctaagat 10884150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 12688277 - 12688393
Alignment:
Q  49 taagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagaccca 146  Q
    ||||||||||| ||  ||||||| ||||  ||| ||||||||||||||| |||| |||||| | |||||| ||||||||||||| |||||| |||  |||    
T  12688277 taagagtcccacattggatagaagatgacctgacaatgtgtttataagtgggggcaatccttacctcacaagccagttttgtggggttgtgataggtcca 12688376  T
Q  147 atcacgatttctaagat 163  Q
    | || ||||||||||||    
T  12688377 accatgatttctaagat 12688393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 28213221 - 28213105
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    ||||||||||||||  || |||||  | ||| | ||| |||||||||||||||| || ||||||||| ||||| |||| ||| | || |||||||||| |    
T  28213221 gtgttaagagtcccgcataagatatgagatggtctgacaatgtgtttataagtgcggcaatcctcacctcacaagccaatttggcggggttgtgttaggc 28213122  T
Q  144 ccaatcacgatttctaa 160  Q
    |||| ||||||||||||    
T  28213121 ccaaccacgatttctaa 28213105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 12317013 - 12317132
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || ||||| | ||| |||||||||||||||||||  ||||||||| ||| | ||   ||||||||  ||||||||| |    
T  12317013 tgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggc 12317112  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||||||||||    
T  12317113 ccaaccacgatttctaagat 12317132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 16050029 - 16050112
Alignment:
Q  79 tgataatgtgtttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||| ||||||||||||  || ||||||||| ||||| | ||||||||||| |||||||||||||||| ||||| ||||||    
T  16050029 tgataatttgtttataagtgaaggcaatcctcacctcacaagtcagttttgtggggttgtgttagacccaaccacgacttctaa 16050112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 19256662 - 19256587
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  19256662 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 24075382 - 24075307
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  24075382 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 24075307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 37001233 - 37001312
Alignment:
Q  86 gtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||| ||||||  ||||||||| ||||| ||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  37001233 gtgtttataggtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttcaaagat 37001312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 42846682 - 42846604
Alignment:
Q  87 tgtttataagtgg--ggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||  || ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||||    
T  42846682 tgtttataagtggagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 10449967 - 10450085
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    ||||||||||| || ||| ||||| |||||   ||| |||||||||||||||| ||| |||||||| |||| | ||| ||||||| | |||||||||| |    
T  10449967 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgtgggcaatcctcacctcagaagccggttttgtagggttgtgttaggc 10450066  T
Q  144 ccaatcacgatttctaaga 162  Q
     ||| ||||||||||||||    
T  10450067 tcaaccacgatttctaaga 10450085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 20301265 - 20301347
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||  |||||| || ||||| ||| ||||||||  |||||||||| ||||| |||||||||||||||    
T  20301265 aatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagat 20301347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 21087897 - 21087979
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||  |||||| || ||||| ||| ||||||||  |||||||||| ||||| |||||||||||||||    
T  21087897 aatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagat 21087979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 41790663 - 41790744
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||  ||||||||| ||| | ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  41790663 aatgtgtttataagtggggacaatcctcacctcataagccggttttgtgg-gttgtgttaggcccaaccacgatttctaagat 41790744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 28069475 - 28069358
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||  |||||   ||| ||||| |||||||||||||  ||||||||| |||||  |   ||||||||||||||||||||    
T  28069475 gtgttaagagtcccacatcggatatgacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaaactgattttgtggagttgtgttaga 28069376  T
Q  143 cccaatcacgatttctaa 160  Q
     |||| ||||||||||||    
T  28069375 tccaaccacgatttctaa 28069358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 4828067 - 4828151
Alignment:
Q  78 atgataatgtgtttataagtgggg-taatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||| ||| |||||||||||||||  |||||||| |||||| ||| ||||||||| |||||||||| ||||| |||||| |||||    
T  4828067 atgacaatttgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatctctaa 4828151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 5932294 - 5932182
Alignment:
Q  53 agtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatca 150  Q
    ||||||| ||| ||||| ||||| | | | ||||||||||||||| |||| || ||||| |||||| ||| ||||||||| |||||||||| ||||| ||    
T  5932294 agtcccacatcggataggacatggtctaacaatgtgtttataagtgggggcaagcctcacctcacaagcctgttttgtggggttgtgttaggcccaacca 5932195  T
Q  151 cgatttctaagat 163  Q
    | |||| ||||||    
T  5932194 ccatttttaagat 5932182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 4828292 - 4828375
Alignment:
Q  78 atgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttcta 159  Q
    |||| ||| ||||||||||| |||| |||||||| |||||| ||| ||||||||| |||||||||| ||||| ||| |||||||    
T  4828292 atgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttcta 4828375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 17469826 - 17469901
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| | ||| ||||||||||||    
T  17469826 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 17469901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 17477073 - 17477148
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| | ||| ||||||||||||    
T  17477073 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 17477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 19256896 - 19256821
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||  ||||||||| |||||||||| ||||| ||||||||||||    
T  19256896 tgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaa 19256821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 36917556 - 36917437
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    ||||||||||| || |||||||||   |||   ||| ||||| ||||||||||||| |||||||||| ||||| | ||||||||||| |||||||||  |    
T  36917556 tgttaagagtctcacatcagataggtaatggcctgacaatgtatttataagtgggggtaatcctcacatcacaagtcagttttgtggggttgtgttaagc 36917457  T
Q  144 ccaatcacgatttctaagat 163  Q
     ||| ||| |||||||||||    
T  36917456 acaaccaccatttctaagat 36917437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 39743537 - 39743612
Alignment:
Q  87 tgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||| |||| ||||||||| ||||| |||  |||||||| |||||||||| ||||| ||||||||||||    
T  39743537 tgtttataagttggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 39743612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 22638256 - 22638178
Alignment:
Q  86 gtgtttataagt-ggggtaatcctcact-cacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||| |||| |||||||||  |||| ||| ||||||||| |||||||||  ||||| ||||||||||||||    
T  22638256 gtgtttataagtaggggcaatcctcaccacacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 22638178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 27204975 - 27205049
Alignment:
Q  90 ttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||  ||||||||| ||| | ||| ||||||||| |||||||||| ||||| ||||||||||||||    
T  27204975 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 27205073 - 27205147
Alignment:
Q  90 ttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||  ||||||||| ||| | ||| ||||||||| |||||||||| ||||| ||||||||||||||    
T  27205073 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 27205171 - 27205245
Alignment:
Q  90 ttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||  ||||||||| ||| | ||| ||||||||| |||||||||| ||||| ||||||||||||||    
T  27205171 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 8084366 - 8084447
Alignment:
Q  83 aatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||| ||| |||||| |||||  |||||||||||  ||||||||||  |||| ||||||||||||||    
T  8084366 aatgtatttataagtgggggtaaacctcacctcacaaaccagttttgtgaggttgtgttaggtccaaccacgatttctaaga 8084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 38447507 - 38447442
Alignment:
Q  83 aatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagaccca 146  Q
    ||||||||||||||| |||| |||||||| |||||| ||| ||||||||| |||||||||| ||||    
T  38447507 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggccca 38447442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 3157640 - 3157557
Alignment:
Q  83 aatgtgtttataagtggggt--aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||| |||||||||||||   ||||||||| ||||| ||||||||||||| |||||||||| | ||| ||| |||| ||||||    
T  3157640 aatgtatttataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggctcaaccaccatttataagat 3157557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 34842645 - 34842761
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||||| ||| |  ||   ||| ||| |||||||||||||||  ||||||||| ||| ||| | ||||||||| |||||||||| |    
T  34842645 tgttaagagtcccacatcagttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcataggtcggttttgtggggttgtgttaggc 34842744  T
Q  144 ccaatcacgatttctaa 160  Q
     ||| ||||||||||||    
T  34842745 tcaaccacgatttctaa 34842761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 35385929 - 35385810
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt--ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||||||||| ||| ||||||| ||    ||||||| |||||||||||  |||| |||||||| |||| | ||| ||||||||| |||||||||      
T  35385929 tgttaagagtcccacatcggatagaagatagcctgataatatgtttataagtggggggcaatcctcacctcataagccggttttgtggggttgtgttaag 35385830  T
Q  143 cccaatcacgatttctaaga 162  Q
    | ||| ||| ||||||||||    
T  35385829 ctcaaccaccatttctaaga 35385810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 34027593 - 34027712
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcact-cacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||||| |||||  ||   ||| ||| |||||||||||||||  |||||||||| |||| ||| ||||||||| ||||||||||     
T  34027593 gtgttaagagtcccacatcagttagaagttggcctgacaatttgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgttagg 34027692  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||||||||||||||||||    
T  34027693 cccaatcacgatttctaaga 34027712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 29469806 - 29469923
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| || || |||||   ||| |||||||||||||||||||  ||||||||| | ||| ||| ||||||||||||||||||||     
T  29469806 gtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttagg 29469905  T
Q  143 cccaatcacgatttctaa 160  Q
    ||||| ||||||||||||    
T  29469906 cccaaccacgatttctaa 29469923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 26240034 - 26239914
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||| | ||| ||||| ||||| | ||| ||||||||||||||| |||| |||||||| |||||| | | || |||||| |||||||||||    
T  26240034 gtgttaagagtccgacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttaga 26239935  T
Q  143 cccaatcacgatttctaagat 163  Q
    ||||| ||| |||||||||||    
T  26239934 cccaaccacaatttctaagat 26239914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 31892353 - 31892472
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||||||| || ||| ||| |||||||| |||| ||||| |||||||||||||  |||| ||| |||||| ||| ||||||||| | ||||||||     
T  31892353 gtgttaagagtctcacatcggatggaacatgacatgacaatgtatttataagtggggacaatcttcacctcacaagccggttttgtggggatgtgttagg 31892452  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  31892453 cccaaccacgatttctaaga 31892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 47710447 - 47710530
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagata 164  Q
    |||||||||||||||||||  ||||||||| ||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||||    
T  47710447 aatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagata 47710530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 47722103 - 47722186
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagata 164  Q
    |||||||||||||||||||  ||||||||| ||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||||    
T  47722103 aatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagata 47722186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 25620140 - 25620222
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  25620140 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25620222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 33996426 - 33996309
Alignment:
Q  48 ttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagaccc 145  Q
    |||||||||||| ||| ||||| |||||   | ||||||| |||||||||||||  |||| |||| ||||| | | |||||||||||||||||||| |||    
T  33996426 ttaagagtcccacatcggataggacatggcctaataatgtatttataagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggccc 33996327  T
Q  146 aatcacgatttctaagat 163  Q
    || |||||||||||||||    
T  33996326 aaccacgatttctaagat 33996309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 3038164 - 3038080
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagataa 165  Q
    |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| || ||||||||||||||    
T  3038164 aatgtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagataa 3038080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 21055070 - 21054950
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||||||| |||||   |||   ||| ||| |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| |    
T  21055070 tgttaagagtcccatatcggataggtgatggcctgacaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 21054971  T
Q  144 ccaatcacgatttctaagata 164  Q
    |||| ||| ||||||||||||    
T  21054970 ccaaccaccatttctaagata 21054950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 29469572 - 29469688
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || |||||   ||| |||||||||||||||||||  ||||||||| | ||| ||| ||||||||| |||||||||| |    
T  29469572 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 29469671  T
Q  144 ccaatcacgatttctaa 160  Q
    |||| ||||||||||||    
T  29469672 ccaaccacgatttctaa 29469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 48243177 - 48243060
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||||||||  |  || | ||| ||||||||||||||| |||| |||||||| |||||| ||| ||||||||| ||||||||||     
T  48243177 gtgttaagagtcccacatcagatatga--tggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 48243080  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| |||||||| |||||    
T  48243079 cccaaccacgatttgtaaga 48243060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 48661672 - 48661556
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||||||||| | ||||  ||| ||||| |||||| ||||||  ||||||||| ||||| ||| ||||||||   |||||||||||    
T  48661672 tgttaagagtcccacatcagataggagatgacctgacaatgtatttataggtgggggcaatcctcacctcacaagccggttttgtgagattgtgttagac 48661573  T
Q  144 ccaatcacgatttctaa 160  Q
    |||| ||||||||||||    
T  48661572 ccaaccacgatttctaa 48661556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 10903093 - 10903168
Alignment:
Q  87 tgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||| ||||| ||||||| ||||    
T  10903093 tgtttataagtaggggtaatcctcacctcacaagccggttttgtggagttgtgttagccccaaccacgattactaa 10903168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 10420729 - 10420650
Alignment:
Q  84 atgtgtttataagtggggtaatcctcact-cacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||||||| |||| ||||| |||| | ||||||||||||||| | | |||||| | ||||||||||||||    
T  10420729 atgtgtttataagtggggcaatcttcacttcacaagtcagttttgtggagttatctaagaccctaccacgatttctaaga 10420650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 21861261 - 21861380
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || |||||   ||| |||||||||||||||| ||| ||||||||| | ||| ||| |||||||||  ||||||||| |    
T  21861261 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggc 21861360  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||||||||||    
T  21861361 ccaaccaccatttctaagat 21861380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 34027401 - 34027476
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  34027401 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 34027476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 43688277 - 43688159
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||| |||||   ||| ||||||||||||||| |||| |||||| | ||| || ||| | ||||||| ||||||||||     
T  43688277 gtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatccttacctctcaagcc-ggtttgtggggttgtgttagg 43688179  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  43688178 cccaaccacgatttctaaga 43688159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 11211758 - 11211684
Alignment:
Q  83 aatgtgtttataagtggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgattt 156  Q
    ||||| ||||||||||||| |||||||| |||||| ||| ||||||||| |||||||| | ||||| ||||||||    
T  11211758 aatgtctttataagtggggcaatcctcacctcacaagccggttttgtggggttgtgttgggcccaaccacgattt 11211684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 36277306 - 36277224
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||  ||||||||| ||||| | |  |||||||| |||||||||| ||||| |||||||||||||||    
T  36277306 aatgtgtttataagtgggggcaatcctcacctcacaagtcgattttgtggggttgtgttagtcccaaccacgatttctaagat 36277224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 48243517 - 48243435
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||  |||||||| || ||| ||| ||||||||| |||||||||||||||| || ||||| ||||||    
T  48243517 aatgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccatgatttttaagat 48243435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 21861495 - 21861614
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||| ||| ||| || || |||||   ||| ||||||||||||||| |||| |||||||| || ||| |||  |||||||| ||||||||||     
T  21861495 gtgttaagagttccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccgattttgtggggttgtgttagg 21861594  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||| ||||||||||    
T  21861595 cccaaccaccatttctaaga 21861614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 31257107 - 31257032
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||||  |||| |||| |||||  |||||||||||| |||||||||||| ||| ||||||||||||    
T  31257107 tgtttataagtgggggcaatcttcacctcacaaaccagttttgtggggttgtgttagactcaaccacgatttctaa 31257032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 28080632 - 28080750
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctcact-cacaggccagttttgtggagttgtgttagacc 144  Q
    ||||||||||| || ||| ||||  | ||||  ||| ||||||||||||||| ||| |||  ||||| |||| | | ||||||||| ||| ||||||| |    
T  28080632 tgttaagagtctcacatcggataagagatgacctgacaatgtgtttataagtagggcaattttcacttcacaagtcggttttgtggggttatgttagatc 28080731  T
Q  145 caatcacgatttctaagat 163  Q
    ||| |||||||||||||||    
T  28080732 caaccacgatttctaagat 28080750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 165
Target Start/End: Complemental strand, 36993192 - 36993070
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggg-gtaatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||| | | ||| ||||  ||||| | ||| ||||||||||||||| || | ||| ||||| ||||| ||  ||||||||| ||||||||||     
T  36993192 gtgttaagagttcaacatcggatatgacatggtctgacaatgtgtttataagtaggagcaatgctcacctcacaagctggttttgtggggttgtgttagg 36993093  T
Q  143 cccaatcacgatttctaagataa 165  Q
    ||||| || ||||||||||||||    
T  36993092 cccaaccatgatttctaagataa 36993070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 6634863 - 6634940
Alignment:
Q  87 tgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||||  ||||||||| ||| | || |||||||||| |||||||||| ||||| || |||||||||||    
T  6634863 tgtttataagtgggggcaatcctcacctcataagctagttttgtggggttgtgttaggcccaaccatgatttctaaga 6634940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 8075845 - 8075938
Alignment:
Q  65 gatagaacatgatatgataatgtgtttataagtgggg-taatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgattt 156  Q
    ||||||| |||  |||||||||||||||||||||||| ||||| ||| |||||| | | ||||| ||||||||||| ||  |||| ||||||||    
T  8075845 gatagaagatggcatgataatgtgtttataagtggggataatcttcacctcacaagtcggttttatggagttgtgtcaggtccaaccacgattt 8075938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 40121963 - 40121922
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  40121963 gttttgtggggttgtgttaggcccaaccacgatttctaagat 40121922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 6001553 - 6001497
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg 101  Q
    ||||||||||||||| ||| ||||||| ||||  ||| ||| |||||||||||||||    
T  6001553 gtgttaagagtcccacatcggatagaagatgacctgacaatatgtttataagtgggg 6001497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 15317557 - 15317637
Alignment:
Q  84 atgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||| |||| |||||||| ||||||  | |||||||||| |||||||||| ||||| ||  ||||||||||    
T  15317557 atgtgtttataagtgggggcaatcctcacctcacaaactagttttgtggtgttgtgttaggcccaaccataatttctaaga 15317637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 141
Target Start/End: Complemental strand, 18826608 - 18826508
Alignment:
Q  43 aagtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctc-actcacaggccagttttgtggagttgtgtta 140  Q
    ||||||||||||||||| ||  ||||| | ||||  ||| ||||||||||||||| |||||||| ||| ||||||| ||   |||||||| |||||||||    
T  18826608 aagtgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtgggggtaattctcaactcacaagctgattttgtggggttgtgtta 18826509  T
Q  141 g 141  Q
    |    
T  18826508 g 18826508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 31257316 - 31257268
Alignment:
Q  112 tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||    
T  31257316 tcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 31257268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 32879695 - 32879612
Alignment:
Q  83 aatgtgtttataagt--ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||  |||| |||||||| |||||| ||| |||||| || |||||||||| |||||  |||| |||||||||    
T  32879695 aatgtgtttataagtggggggcaatcctcacctcacaagccggttttgcggggttgtgttaggcccaacgacgacttctaagat 32879612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 3590 - 3472
Alignment:
Q  44 agtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttag 141  Q
    |||||||||||||||| ||| | ||| |  ||| |||| ||| |||||||||||||||  |||| |||| ||||| ||| ||||||||| ||||||||||    
T  3590 agtgttaagagtcccacatcggttaggagttgacatgacaatttgtttataagtggggacaatcttcacctcacaagccggttttgtggggttgtgttag 3491  T
Q  142 acccaatcacgatttctaa 160  Q
    |||||||||||||||||||    
T  3490 acccaatcacgatttctaa 3472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 164
Target Start/End: Original strand, 25713359 - 25713480
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| |||||   ||| | ||| |||||||||||||||||||  |||| |||| ||||| ||||||||||||||||||||||||     
T  25713359 gtgttaagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatcgtcacctcacaagccagttttgtggagttgtgttagg 25713458  T
Q  143 cccaatcacgatttctaagata 164  Q
    || || ||| ||||||||||||    
T  25713459 cctaaccaccatttctaagata 25713480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 42586518 - 42586438
Alignment:
Q  83 aatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||| ||||||||||| ||||||||| ||||| |||| |||||||| |||||||||| ||||| ||||||||||||||    
T  42586518 aatgtgtatataagtggggcaatcctcacctcacaagccaattttgtggggttgtgttaggcccaaccacgatttctaaga 42586438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 4113123 - 4113004
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||| ||||||| ||| ||| | |||||   ||| |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| |    
T  4113123 tgttaaaagtcccacatcggatgggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 4113024  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||||||||||    
T  4113023 ccaaccacgatttctaagat 4113004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 26177109 - 26177228
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| || || ||||||  ||| || ||||||||||||||||  ||||||||| ||| |  |||||||||||| ||||||||||     
T  26177109 gtgttaagagtcccacatcggacaggacatgacctgacaacgtgtttataagtgggggcaatcctcacctcaaaaaccagttttgtggggttgtgttagg 26177208  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||||||||||||||    
T  26177209 cccaaccacgatttctaaga 26177228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 43409774 - 43409892
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacc 144  Q
    ||||||||||| || ||| ||||||||||| | ||| ||||| ||||||||||||| ||| |||| |||||| ||| |||||| || |||||||||   |    
T  43409774 tgttaagagtctcacatcggatagaacatggtctgacaatgtatttataagtggggcaattctcacctcacaagccggttttggggggttgtgttatgtc 43409873  T
Q  145 caatcacgatttctaagat 163  Q
    ||| |||||||||||||||    
T  43409874 caaccacgatttctaagat 43409892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 164
Target Start/End: Original strand, 35772230 - 35772351
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||| | |||   ||| |||||||||||||||||||  |||||| || ||| | ||| ||||||||| ||||||||||     
T  35772230 gtgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttagg 35772329  T
Q  143 cccaatcacgatttctaagata 164  Q
    ||||| ||||||||||||||||    
T  35772330 cccaaccacgatttctaagata 35772351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 40079156 - 40079237
Alignment:
Q  83 aatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||||||||||||||    
T  40079156 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 38668119 - 38668211
Alignment:
Q  73 atgatatgataatgtgtttataagtggggt-aatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||| |||| |||||||||||||||||||  |||| ||| |||||| |||| |||||||| |||||||||| ||||||||| |||||||||||    
T  38668119 atgaaatgacaatgtgtttataagtgggggcaatcatcatctcacaagccaattttgtggggttgtgttaggcccaatcacaatttctaagat 38668211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 20208643 - 20208527
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| ||||| ||||| | ||| ||||||||||||||| |||| |||||||| |||| ||  | | ||||||| |||||||||| |    
T  20208643 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcatag--ccggtttgtggggttgtgttaggc 20208546  T
Q  144 ccaatcacgatttctaaga 162  Q
    |||| ||||||||||||||    
T  20208545 ccaaccacgatttctaaga 20208527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 38080572 - 38080683
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacc 144  Q
    |||||||||||||| ||| ||| | | |||   ||| ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| |||||||||| ||    
T  38080572 tgttaagagtcccacatcggatgggagatggcctgacaatgtgtttataattggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcc 38080671  T
Q  145 caatcacgattt 156  Q
    ||| ||| ||||    
T  38080672 caaccacaattt 38080683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 165
Target Start/End: Complemental strand, 25145603 - 25145481
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||||||| || ||| |||||   ||| | ||| ||||||||||| |||||||  ||||||||| ||||| | | ||||||||  |||||||||||    
T  25145603 gtgttaagagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgttaga 25145504  T
Q  143 cccaatcacgatttctaagataa 165  Q
    ||||| |||||||||||||||||    
T  25145503 cccaaccacgatttctaagataa 25145481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 17452789 - 17452680
Alignment:
Q  53 agtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatca 150  Q
    ||||||| ||||||||  |||||   ||| ||||| |||||||||||||  ||||||||| ||||| ||| ||||||||| |||||||||| ||||| ||    
T  17452789 agtcccacatcagataagacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 17452690  T
Q  151 cgatttctaa 160  Q
    ||||||||||    
T  17452689 cgatttctaa 17452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 3169729 - 3169849
Alignment:
Q  42 aaagtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgtt 139  Q
    |||||||||||||||||| ||| | ||| |  || | ||| ||| |||||||||||||||  |||| |||| ||||| ||| ||||||||| ||||||||    
T  3169729 aaagtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgtt 3169828  T
Q  140 agacccaatcacgatttctaa 160  Q
    || ||||| ||||||||||||    
T  3169829 aggcccaaccacgatttctaa 3169849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 17452945 - 17452826
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| ||||  |||||   ||| ||||| |||||||||||||  |||| |||| ||||| ||| ||||||||| |||||||||| |    
T  17452945 tgttaagagtcccacatcggataagacatggcctgacaatgtatttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggc 17452846  T
Q  144 ccaatcacgatttctaagat 163  Q
    | || |||||||||||||||    
T  17452845 ctaaccacgatttctaagat 17452826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 30369843 - 30369921
Alignment:
Q  87 tgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||||| |||| ||||||||| ||||| |  |||||||||| |||||||||| ||||| |||||||||||||||    
T  30369843 tgtttataagtaggggcaatcctcacctcacaagatagttttgtggggttgtgttaggcccaaccacgatttctaagat 30369921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 40316129 - 40316051
Alignment:
Q  84 atgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||||||||||| ||||||||| ||| | ||| ||||||||  ||||||||||| |||| ||||||||||||    
T  40316129 atgtgtttataagtggggtcaatcctcacctcataagccggttttgtgaggttgtgttagatccaaccacgatttctaa 40316051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 33157266 - 33157307
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  33157266 gttttgtggggttgtgttaggcccaatcacgatttctaagat 33157307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 35303557 - 35303504
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgg 99  Q
    |||||||||||||| ||| ||||||||||||| ||| ||||| |||||||||||    
T  35303557 tgttaagagtcccacatcggatagaacatgatctgacaatgtatttataagtgg 35303504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 39348199 - 39348118
Alignment:
Q  83 aatgtgtttataagtgg-ggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||||| || |||||||| || ||  ||| ||| ||||| |||||||||||||||| ||||||||||||||    
T  39348199 aatgtgtttataagtggaggcaatcctcaacttaccagccggttctgtggggttgtgttagacccaaccacgatttctaaga 39348118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 51589192 - 51589309
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| | ||| |  || | ||| ||| |||||||||||| ||| ||||||||| ||||| ||| ||||||||| ||||||||||     
T  51589192 gtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttagg 51589291  T
Q  143 cccaatcacgatttctaa 160  Q
    || || ||||||||||||    
T  51589292 cctaaccacgatttctaa 51589309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 25255345 - 25255397
Alignment:
Q  111 ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||| ||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  25255345 ctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25255397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 34264790 - 34264710
Alignment:
Q  83 aatgtgtttataagtgggg-taatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaag 161  Q
    ||||||||||||||||||| |||||| || |||||| | ||||||||| |||||||| |||  |||| |||||||||||||    
T  34264790 aatgtgtttataagtggggataatccacatctcacaagtcagttttgtagagttgtgctaggtccaaccacgatttctaag 34264710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 42351939 - 42351859
Alignment:
Q  84 atgtgtttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    |||||||||||||||| ||  |||||||| ||||| ||||||||||||| |||||||| | ||||| || |||||||||||    
T  42351939 atgtgtttataagtggaggccatcctcacctcacaagccagttttgtggtgttgtgttgggcccaaccatgatttctaaga 42351859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 2859744 - 2859625
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg-taatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    ||||||||||| || ||| |||||   ||| | ||| ||||||||||| ||||||| |||||||||| ||||| ||| ||||||||  |||||||||| |    
T  2859744 tgttaagagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttagcc 2859645  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||  |||||||||||    
T  2859644 ccaaccatcatttctaagat 2859625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 4112658 - 4112539
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| || || |||||  |||| ||||||||||||||| |||| |||| ||| |||||| |||  |||| |||  |||||||||     
T  4112658 gtgttaagagtcccacatcggacaggacatggcatgacaatgtgtttataagtaggggcaatcatcacctcacaagccgattttatgggattgtgttagg 4112559  T
Q  143 cccaatcacgatttctaaga 162  Q
    | ||| ||||||||||||||    
T  4112558 cacaaccacgatttctaaga 4112539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 26176875 - 26176994
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || |||||   ||| |||||| ||||||||| ||| ||||||||| ||| |  || ||||||||| |||||||||| |    
T  26176875 tgttaagagtcccacatcggacaggacatggcctgacaatgtgcttataagtgagggcaatcctcacctcaaaaaccggttttgtggggttgtgttaggc 26176974  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| | |||||||||||||    
T  26176975 ccaaccgcgatttctaagat 26176994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 38733348 - 38733467
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| ||||    ||| | ||| ||| |||||||||||| ||| ||||||||| ||| ||||| ||||||||  ||||||||||     
T  38733348 gtgttaagagtcccacatcggatatgtgatggtctgacaatatgtttataagtgagggcaatcctcacctcataggccggttttgtgaggttgtgttagg 38733447  T
Q  143 cccaatcacgatttctaaga 162  Q
    |||||  |||||||||||||    
T  38733448 cccaacaacgatttctaaga 38733467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 39348429 - 39348351
Alignment:
Q  86 gtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||| |||| |||||||| ||||||  || ||||||||| |||||||||| ||||| |||||||||||||||    
T  39348429 gtgtttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaa-cacgatttctaagat 39348351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 51589814 - 51589889
Alignment:
Q  87 tgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||| ||| ||||||||| ||||| |||  |||||||| |||||||||| ||||| ||||||||||||    
T  51589814 tgtttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 51589889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 31432294 - 31432228
Alignment:
Q  98 ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||| ||||||||| ||||| ||| ||||||||| |||||| ||| ||||| |||||||||||||||    
T  31432294 ggggcaatcctcacctcacaagccggttttgtggggttgtgctaggcccaaccacgatttctaagat 31432228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 31496410 - 31496368
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaagata 164  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||    
T  31496410 gttttatggggttgtgttagactcaatcacgatttctaagata 31496368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 33156753 - 33156819
Alignment:
Q  98 ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||| |||||||| ||||||  || ||||||||| |||||||||| ||||| |||||||||||||||    
T  33156753 ggggcaatcctcatctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaagat 33156819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 49142924 - 49143038
Alignment:
Q  50 aagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaa 147  Q
    |||||||||| |||||| | || |||  ||||  |||||||||||||| |||| |||||||| |||||| |||| ||||||||  ||||||||  |||||    
T  49142924 aagagtcccacatcagacaaaatatggcatgaacatgtgtttataagtgggggcaatcctcagctcacaagccaattttgtgggattgtgttatgcccaa 49143023  T
Q  148 tcacgatttctaaga 162  Q
     ||| ||||||||||    
T  49143024 ccaccatttctaaga 49143038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 52127729 - 52127803
Alignment:
Q  87 tgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    ||||||||||||||| ||||||||| ||||| ||   |||||||| ||||||||||  |||| ||||||||||||    
T  52127729 tgtttataagtggggcaatcctcacctcacaagctgcttttgtggggttgtgttaggtccaaccacgatttctaa 52127803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 52907389 - 52907467
Alignment:
Q  84 atgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||| |||| |||||||| |||||| ||  ||||||||| ||||||| |||||||| |||||| |||||    
T  52907389 atgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgtaagacccaaccacgatatctaa 52907467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 29265998 - 29266039
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  29265998 gttttgtggggttgtgttaggcccaaccacgatttctaagat 29266039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 31496254 - 31496202
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg 98  Q
    ||||||||||| |||| |||||||||| |||| |||| ||||||||||||||||    
T  31496254 gtgttaagagttccat-tcagatagaagatgacatgacaatgtgtttataagtg 31496202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 35772074 - 35772115
Alignment:
Q  122 gttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  35772074 gttttgtggggttgtgttaggcccaaccacgatttctaagat 35772115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 52650851 - 52650770
Alignment:
Q  83 aatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||| |||| |||||||| |||||| ||  ||||||||| |||||||||| ||||| ||  ||||||||||    
T  52650851 aatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccataatttctaaga 52650770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 2120123 - 2120163
Alignment:
Q  123 ttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||| ||||||||||  ||||||||||||||||||||    
T  2120123 ttttgtggggttgtgttaggtccaatcacgatttctaagat 2120163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 25145838 - 25145718
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||||||| || ||| |||||   ||||  ||| ||||| ||||| |||||||  ||||||||| ||||| ||| | ||||||| ||||||||||     
T  25145838 gtgttaagagtctcacatcggataggtgatgacctgacaatgtatttattagtgggggcaatcctcacctcacaagccggatttgtggggttgtgttagg 25145739  T
Q  143 cccaatcacgatttctaagat 163  Q
    ||||| || ||||||||||||    
T  25145738 cccaaccatgatttctaagat 25145718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 35892257 - 35892313
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtgggg 101  Q
    ||||||||||||||| |||||||| || ||| | ||| ||||| |||||||||||||    
T  35892257 gtgttaagagtcccacatcagatataagatggtctgacaatgtatttataagtgggg 35892313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 51460519 - 51460443
Alignment:
Q  86 gtgtttataagtgg-ggtaatcctcactc-acaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||||||||| ||||||| |||||  ||| ||||||||||||| |||||||||| ||||| ||  ||||||||    
T  51460519 gtgtttataagtggtggtaatcttcactttacaagccagttttgtggggttgtgttaggcccaaccataatttctaa 51460443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 51590006 - 51590121
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    ||||||||||||||| ||||| ||| |  |  | ||| ||| |||||||||||| |  ||||||||| ||||| ||| |||||||||  ||||||||| |    
T  51590006 gtgttaagagtcccacatcagttaggagtttgtctgacaatttgtttataagtgagc-aatcctcacctcacaagccggttttgtgggattgtgttaggc 51590104  T
Q  144 ccaatcacgatttctaa 160  Q
    |||| ||||||||||||    
T  51590105 ccaagcacgatttctaa 51590121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 52961548 - 52961664
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    |||||||| |||||| ||| ||||| | ||| | ||| |||||||||||||||| ||| |||||||| |||| | ||| ||||| ||| ||||||||||     
T  52961548 gtgttaagtgtcccacatcggataggagatggtctgacaatgtgtttataagtgagggcaatcctcacctcaaaagccggttttatggggttgtgttagg 52961647  T
Q  143 cccaatcacgatttcta 159  Q
     |||| || ||||||||    
T  52961648 tccaaccatgatttcta 52961664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 1883 - 2002
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || || ||||| | ||| ||||||||||||||| |||| |||||||| || ||| ||| ||||||||| |||||||||| |    
T  1883 tgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 1982  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| ||| |||||||||||    
T  1983 ccaaccaccatttctaagat 2002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 2117 - 2236
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||| || || |||||   ||| ||||||||||||||| |||| |||||||| || ||| ||| ||||||||| ||||||||||     
T  2117 gtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttagg 2216  T
Q  143 cccaatcacgatttctaaga 162  Q
    ||||| ||| ||||||||||    
T  2217 cccaaccaccatttctaaga 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 5870 - 5752
Alignment:
Q  47 gttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctca-ctcacaggccagttttgtggagttgtgttagacc 144  Q
    ||||||||||||| ||| ||||  ||||  | ||| |||||||||||||||||||  |||||||| |||||| ||| |||||| || |||||||||| ||    
T  5870 gttaagagtcccacatcggataagacatagtctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcc 5771  T
Q  145 caatcacgatttctaagat 163  Q
    ||| |||||||||||||||    
T  5770 caaccacgatttctaagat 5752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 5624 - 5543
Alignment:
Q  83 aatgtgtttataagt-ggggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||||||||||||| |||| ||||||||| ||||| ||| |||||| || |||||||||| ||||| ||  ||||||||||    
T  5624 aatgtgtttataagtgggggcaatcctcacttcacaagccggttttgcggggttgtgttaggcccaaccataatttctaaga 5543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 51205 - 51322
Alignment:
Q  47 gttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagacc 144  Q
    ||||||||||||||||  ||||| ||||| | ||| |||||||||||||||||||  ||||||||| ||||| | ||||||||||| |||||||||  |     
T  51205 gttaagagtcccatattggataggacatgtt-tgacaatgtgtttataagtgggggcaatcctcacctcacaagtcagttttgtggggttgtgttatgct 51303  T
Q  145 caatcacgatttctaagat 163  Q
    ||||||| |||||||||||    
T  51304 caatcacaatttctaagat 51322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 6240 - 6355
Alignment:
Q  45 gtgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagt-ggggtaatcctca-ctcacaggccagttttgtggagttgtgttaga 142  Q
    ||||||||||||||| ||||||||  | ||  | ||| ||||||||||||||| |||| |||||||| |||||| |||  |||||||| ||||||||||     
T  6240 gtgttaagagtcccacatcagataagagatagtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttagg 6339  T
Q  143 cccaatcacgatttct 158  Q
    ||||| ||||||||||    
T  6340 cccaaccacgatttct 6355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 14307 - 14389
Alignment:
Q  83 aatgtgtttataagtgggg-taatcctca-ctcacaggccagttttgtggagttgtgttagacccaatcacgatttctaagat 163  Q
    |||||||||||||||||||  |||| ||| |||||| ||| ||||||||| |||||||||| ||||| |||| ||||||||||    
T  14307 aatgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttttctaagat 14389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 20943 - 21024
Alignment:
Q  83 aatgtgtttataagtgg-ggtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaaga 162  Q
    ||||| ||||||||||  |||||||||||| ||||| ||| ||||||||| |||||||||  ||||| ||||||||||||||    
T  20943 aatgtatttataagtgaaggtaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 21024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 56426 - 56542
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtg-gggtaatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| | ||| |  |||| ||| ||| ||||||||| || ||| |||| |||| ||||| ||| ||||||||| |||||||||| |    
T  56426 tgttaagagtcccacatcggttaggagttgatctgacaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggc 56525  T
Q  144 ccaatcacgatttctaa 160  Q
    |||| ||||||||||||    
T  56526 ccaaccacgatttctaa 56542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 288770 - 288656
Alignment:
Q  50 aagagtcccatatcagatagaacatgatatgataatgtgtttataagtggg-gtaatcctcac-tcacaggccagttttgtggagttgtgttagacccaa 147  Q
    |||||||||| ||| ||||| | ||| | ||| ||||| ||||||  |||| | ||||||||| ||||| ||  |||||||||||||||||||| |||||    
T  288770 aagagtcccacatcggataggagatggtctgacaatgtatttatatctgggcgcaatcctcacctcacaagctggttttgtggagttgtgttaggcccaa 288671  T
Q  148 tcacgatttctaaga 162  Q
     || |||||||||||    
T  288670 ccatgatttctaaga 288656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 81809 - 81928
Alignment:
Q  46 tgttaagagtcccatatcagatagaacatgatatgataatgtgtttataagtggggt-aatcctcac-tcacaggccagttttgtggagttgtgttagac 143  Q
    |||||||||||||| ||| || ||||||||   ||| ||| |||||||||||||||  |||  |||| | ||| | | ||||||||| |||||||||| |    
T  81809 tgttaagagtcccacatcggacagaacatggcctgacaatatgtttataagtggggacaattttcaccttacaagtcggttttgtggggttgtgttaggc 81908  T
Q  144 ccaatcacgatttctaagat 163  Q
    |||| |||||||||||||||    
T  81909 ccaaccacgatttctaagat 81928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 3848 - 3928
Alignment:
Q  83 aatgtgtttataagtggggt--aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||| ||||||||||   ||||||||| ||||| ||||||||||||| |||||||||| | ||| ||| ||||||||    
T  3848 aatgtgttaataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaa 3928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 4492 - 4572
Alignment:
Q  83 aatgtgtttataagtggggt--aatcctcac-tcacaggccagttttgtggagttgtgttagacccaatcacgatttctaa 160  Q
    |||||||| ||||||||||   ||||||||| ||||| ||||||||||||| |||||||||| | ||| ||| ||||||||    
T  4492 aatgtgttaataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaa 4572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University