View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10875_low_8 (Length: 201)

Name: NF10875_low_8
Description: NF10875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10875_low_8
NF10875_low_8
[»] chr2 (64 HSPs)
chr2 (21-201)||(6173927-6174122)
chr2 (36-126)||(83971-84061)
chr2 (21-126)||(9986116-9986222)
chr2 (36-126)||(20046872-20046962)
chr2 (21-126)||(27248925-27249031)
chr2 (21-126)||(36234199-36234305)
chr2 (22-126)||(4228324-4228429)
chr2 (22-126)||(21570183-21570288)
chr2 (36-126)||(30420870-30420960)
chr2 (21-126)||(7015485-7015591)
chr2 (36-126)||(8806067-8806157)
chr2 (21-126)||(8971402-8971508)
chr2 (21-126)||(22421929-22422035)
chr2 (21-126)||(31580429-31580535)
chr2 (21-116)||(4193048-4193144)
chr2 (36-115)||(33228778-33228857)
chr2 (24-126)||(40625834-40625937)
chr2 (36-126)||(7558653-7558743)
chr2 (36-126)||(21132033-21132123)
chr2 (21-126)||(25087237-25087342)
chr2 (21-126)||(34600415-34600521)
chr2 (36-126)||(41431229-41431319)
chr2 (21-101)||(3725406-3725487)
chr2 (24-124)||(38575263-38575363)
chr2 (24-126)||(27949627-27949730)
chr2 (60-126)||(40659746-40659812)
chr2 (21-126)||(2808247-2808352)
chr2 (36-126)||(3268625-3268715)
chr2 (36-93)||(45128426-45128483)
chr2 (63-114)||(17319533-17319584)
chr2 (36-103)||(9374353-9374420)
chr2 (71-126)||(31788655-31788710)
chr2 (21-118)||(4778960-4779061)
chr2 (36-113)||(12236848-12236925)
chr2 (22-126)||(30923250-30923355)
chr2 (141-201)||(29043993-29044053)
chr2 (71-115)||(29173563-29173607)
chr2 (79-126)||(17151623-17151670)
chr2 (36-115)||(24461653-24461731)
chr2 (79-118)||(38445373-38445412)
chr2 (36-115)||(41712579-41712658)
chr2 (36-115)||(4100545-4100622)
chr2 (76-118)||(17248998-17249040)
chr2 (56-126)||(27477349-27477419)
chr2 (61-127)||(32197567-32197633)
chr2 (40-126)||(36324055-36324141)
chr2 (61-126)||(39641121-39641186)
chr2 (36-112)||(37613916-37613992)
chr2 (71-118)||(5427715-5427762)
chr2 (76-115)||(18763678-18763717)
chr2 (71-118)||(36942968-36943015)
chr2 (76-118)||(35220535-35220577)
chr2 (81-118)||(281005-281042)
chr2 (36-113)||(459066-459142)
chr2 (77-126)||(4903997-4904046)
chr2 (74-115)||(32678939-32678980)
chr2 (79-115)||(4041448-4041484)
chr2 (78-126)||(8809478-8809526)
chr2 (137-201)||(18681386-18681450)
chr2 (42-114)||(23903554-23903626)
chr2 (21-84)||(26025270-26025334)
chr2 (78-126)||(31128638-31128686)
chr2 (78-126)||(32913441-32913489)
chr2 (79-115)||(33585589-33585625)
[»] chr6 (48 HSPs)
chr6 (21-126)||(8497165-8497271)
chr6 (21-126)||(12653141-12653247)
chr6 (36-126)||(25064433-25064523)
chr6 (24-126)||(7875821-7875924)
chr6 (24-126)||(7880879-7880982)
chr6 (36-126)||(16419355-16419445)
chr6 (36-126)||(17237076-17237166)
chr6 (36-126)||(17334950-17335040)
chr6 (21-126)||(23947091-23947197)
chr6 (22-126)||(4088657-4088762)
chr6 (36-111)||(4984357-4984432)
chr6 (36-126)||(8196197-8196287)
chr6 (36-126)||(12059563-12059653)
chr6 (24-115)||(33740355-33740447)
chr6 (36-115)||(8027908-8027987)
chr6 (21-116)||(3173986-3174082)
chr6 (23-114)||(4468761-4468853)
chr6 (36-126)||(28634903-28634993)
chr6 (36-126)||(35001787-35001877)
chr6 (49-111)||(16892619-16892681)
chr6 (36-115)||(12168888-12168965)
chr6 (38-126)||(10228876-10228967)
chr6 (40-126)||(33110808-33110894)
chr6 (21-93)||(7028085-7028158)
chr6 (24-96)||(34489428-34489501)
chr6 (141-201)||(27774906-27774966)
chr6 (135-201)||(6946879-6946946)
chr6 (76-118)||(546229-546271)
chr6 (21-118)||(606402-606503)
chr6 (135-201)||(12794422-12794488)
chr6 (77-118)||(67852-67893)
chr6 (136-201)||(9224240-9224304)
chr6 (77-126)||(33053019-33053068)
chr6 (50-126)||(8518921-8518997)
chr6 (68-115)||(6957342-6957389)
chr6 (71-118)||(23128816-23128863)
chr6 (76-115)||(30776864-30776903)
chr6 (71-126)||(30894789-30894843)
chr6 (71-118)||(32327065-32327112)
chr6 (79-113)||(1933545-1933579)
chr6 (77-115)||(9341502-9341540)
chr6 (24-97)||(15612366-15612440)
chr6 (36-82)||(20619662-20619708)
chr6 (77-126)||(14174922-14174971)
chr6 (77-126)||(14179458-14179507)
chr6 (71-115)||(3913419-3913463)
chr6 (76-116)||(7515052-7515092)
chr6 (71-115)||(30493733-30493777)
[»] chr4 (65 HSPs)
chr4 (21-126)||(9528651-9528757)
chr4 (22-126)||(53616425-53616530)
chr4 (21-115)||(20569477-20569572)
chr4 (21-115)||(25274103-25274198)
chr4 (21-126)||(2115362-2115468)
chr4 (21-126)||(38706484-38706590)
chr4 (22-126)||(9645299-9645404)
chr4 (49-126)||(47417871-47417948)
chr4 (39-126)||(44947621-44947708)
chr4 (36-126)||(34024228-34024318)
chr4 (36-126)||(45227831-45227921)
chr4 (36-126)||(50766302-50766392)
chr4 (36-126)||(56199305-56199395)
chr4 (21-115)||(9284131-9284226)
chr4 (36-123)||(43444604-43444691)
chr4 (36-126)||(4644067-4644157)
chr4 (36-126)||(51318194-51318284)
chr4 (36-126)||(1532117-1532207)
chr4 (21-126)||(10359323-10359428)
chr4 (36-126)||(10389544-10389634)
chr4 (36-126)||(3335954-3336044)
chr4 (49-115)||(21090362-21090428)
chr4 (36-126)||(29966535-29966625)
chr4 (36-126)||(46990921-46991011)
chr4 (49-126)||(37188398-37188475)
chr4 (58-126)||(49410432-49410500)
chr4 (24-126)||(6973019-6973122)
chr4 (36-99)||(49680766-49680829)
chr4 (22-102)||(31381491-31381571)
chr4 (21-118)||(47320204-47320304)
chr4 (36-126)||(868372-868462)
chr4 (36-126)||(35261401-35261490)
chr4 (22-126)||(43153793-43153894)
chr4 (69-117)||(28857619-28857667)
chr4 (36-115)||(12265682-12265760)
chr4 (36-126)||(52097706-52097796)
chr4 (36-126)||(18138707-18138794)
chr4 (137-201)||(35800749-35800813)
chr4 (36-126)||(49125920-49126007)
chr4 (36-115)||(7273612-7273691)
chr4 (71-126)||(56040491-56040546)
chr4 (76-118)||(22611400-22611442)
chr4 (76-126)||(27652152-27652202)
chr4 (135-200)||(35851278-35851344)
chr4 (76-118)||(43510413-43510455)
chr4 (49-126)||(35964779-35964856)
chr4 (71-115)||(2520999-2521043)
chr4 (36-115)||(2624671-2624750)
chr4 (69-116)||(6155063-6155110)
chr4 (80-115)||(11299864-11299899)
chr4 (59-126)||(21554623-21554690)
chr4 (135-201)||(43077272-43077338)
chr4 (77-126)||(1621362-1621411)
chr4 (77-118)||(4142615-4142656)
chr4 (36-103)||(8670717-8670781)
chr4 (85-126)||(22301059-22301100)
chr4 (78-115)||(26633523-26633560)
chr4 (78-115)||(43095848-43095885)
chr4 (79-115)||(19853365-19853401)
chr4 (22-126)||(19896416-19896523)
chr4 (42-114)||(21364943-21365015)
chr4 (69-117)||(24736198-24736246)
chr4 (71-119)||(26090755-26090803)
chr4 (71-115)||(35348527-35348571)
chr4 (79-115)||(48257485-48257521)
[»] chr8 (49 HSPs)
chr8 (21-126)||(14906697-14906803)
chr8 (36-126)||(29777423-29777513)
chr8 (22-126)||(9619132-9619237)
chr8 (36-115)||(4809179-4809258)
chr8 (36-126)||(9498389-9498479)
chr8 (36-126)||(11267212-11267302)
chr8 (37-126)||(2656074-2656163)
chr8 (21-126)||(11725884-11725991)
chr8 (36-126)||(9072922-9073012)
chr8 (36-126)||(37565669-37565759)
chr8 (21-126)||(44099710-44099816)
chr8 (49-126)||(11464375-11464452)
chr8 (24-126)||(32724258-32724361)
chr8 (36-126)||(19876402-19876492)
chr8 (36-126)||(33896290-33896380)
chr8 (36-126)||(34612008-34612098)
chr8 (49-126)||(43192150-43192227)
chr8 (22-126)||(43889899-43890004)
chr8 (36-119)||(28240052-28240135)
chr8 (22-115)||(23851269-23851363)
chr8 (36-126)||(33342638-33342727)
chr8 (36-126)||(44578234-44578324)
chr8 (22-126)||(16794495-16794599)
chr8 (36-112)||(17949736-17949812)
chr8 (36-112)||(39152932-39153008)
chr8 (21-118)||(1236487-1236587)
chr8 (76-118)||(15344507-15344549)
chr8 (76-118)||(15433572-15433614)
chr8 (76-118)||(15524876-15524918)
chr8 (135-201)||(30235826-30235892)
chr8 (36-126)||(43135374-43135459)
chr8 (69-126)||(24099097-24099154)
chr8 (21-115)||(30568110-30568208)
chr8 (71-118)||(7883084-7883131)
chr8 (59-102)||(27746928-27746971)
chr8 (36-115)||(33299069-33299148)
chr8 (68-115)||(41060103-41060150)
chr8 (43-126)||(42447824-42447907)
chr8 (36-102)||(17430665-17430731)
chr8 (36-115)||(21237990-21238071)
chr8 (57-126)||(11197087-11197156)
chr8 (71-115)||(16928600-16928644)
chr8 (71-126)||(3673632-3673687)
chr8 (71-126)||(14544738-14544793)
chr8 (80-126)||(3240571-3240617)
chr8 (76-118)||(14585876-14585918)
chr8 (36-102)||(17427015-17427081)
chr8 (77-115)||(31013457-31013495)
chr8 (59-109)||(36568889-36568939)
[»] chr5 (53 HSPs)
chr5 (36-126)||(7241983-7242073)
chr5 (36-126)||(7247158-7247248)
chr5 (21-126)||(27266633-27266739)
chr5 (36-126)||(16981491-16981581)
chr5 (21-126)||(21060057-21060163)
chr5 (21-126)||(34881916-34882022)
chr5 (36-126)||(42580087-42580177)
chr5 (22-126)||(3271177-3271282)
chr5 (22-126)||(41184216-41184320)
chr5 (36-126)||(27752124-27752214)
chr5 (21-126)||(30298408-30298514)
chr5 (36-126)||(43148926-43149016)
chr5 (22-126)||(781587-781692)
chr5 (23-126)||(18677242-18677345)
chr5 (36-126)||(8771971-8772061)
chr5 (36-119)||(7150125-7150208)
chr5 (36-126)||(30299043-30299133)
chr5 (36-126)||(35475128-35475218)
chr5 (49-126)||(19259615-19259692)
chr5 (22-126)||(43008090-43008195)
chr5 (36-103)||(10649864-10649931)
chr5 (36-126)||(7886730-7886819)
chr5 (36-126)||(15571106-15571196)
chr5 (36-126)||(20257486-20257576)
chr5 (21-102)||(30371844-30371926)
chr5 (36-124)||(11768200-11768288)
chr5 (36-115)||(4954202-4954281)
chr5 (63-123)||(7612875-7612935)
chr5 (36-94)||(19280727-19280785)
chr5 (55-103)||(2057648-2057696)
chr5 (49-98)||(37483274-37483323)
chr5 (71-126)||(11976780-11976835)
chr5 (71-126)||(13422121-13422176)
chr5 (79-126)||(26877962-26878009)
chr5 (69-115)||(10332390-10332436)
chr5 (36-126)||(14726268-14726361)
chr5 (24-126)||(28235786-28235891)
chr5 (141-201)||(31721982-31722042)
chr5 (71-115)||(34945592-34945636)
chr5 (78-126)||(37985965-37986013)
chr5 (71-118)||(13007425-13007472)
chr5 (36-103)||(22978714-22978781)
chr5 (71-118)||(24229629-24229676)
chr5 (71-113)||(9113570-9113612)
chr5 (76-118)||(19103317-19103359)
chr5 (76-118)||(28540756-28540798)
chr5 (135-201)||(31742469-31742535)
chr5 (135-200)||(24436133-24436198)
chr5 (77-118)||(26825626-26825667)
chr5 (79-115)||(6011991-6012027)
chr5 (78-126)||(6217087-6217134)
chr5 (71-115)||(25980356-25980400)
chr5 (71-115)||(38597996-38598040)
[»] chr3 (53 HSPs)
chr3 (36-126)||(3848709-3848799)
chr3 (21-126)||(25162630-25162736)
chr3 (22-115)||(32607674-32607768)
chr3 (36-126)||(36906316-36906406)
chr3 (21-126)||(2342642-2342748)
chr3 (36-126)||(25631316-25631406)
chr3 (36-126)||(38440381-38440471)
chr3 (36-126)||(30648509-30648599)
chr3 (22-115)||(44907174-44907268)
chr3 (22-110)||(50611193-50611282)
chr3 (36-126)||(12116292-12116382)
chr3 (21-126)||(17237999-17238105)
chr3 (36-126)||(21916667-21916757)
chr3 (36-126)||(46934833-46934923)
chr3 (21-126)||(51202038-51202144)
chr3 (21-100)||(4178785-4178865)
chr3 (36-103)||(35498990-35499057)
chr3 (59-126)||(49552037-49552104)
chr3 (36-126)||(22803224-22803314)
chr3 (22-126)||(29503655-29503760)
chr3 (57-126)||(37169423-37169492)
chr3 (21-126)||(38854813-38854916)
chr3 (36-126)||(39917189-39917278)
chr3 (21-115)||(53807650-53807747)
chr3 (36-126)||(35175592-35175684)
chr3 (69-126)||(50194178-50194235)
chr3 (38-126)||(46178762-46178850)
chr3 (21-115)||(628715-628812)
chr3 (21-126)||(46979774-46979880)
chr3 (65-126)||(14464704-14464765)
chr3 (22-126)||(44959767-44959873)
chr3 (138-201)||(7966774-7966837)
chr3 (71-118)||(52922962-52923009)
chr3 (36-126)||(21488287-21488377)
chr3 (76-126)||(27856353-27856403)
chr3 (37-114)||(31794274-31794351)
chr3 (77-126)||(46304371-46304420)
chr3 (71-118)||(6954541-6954588)
chr3 (71-118)||(21313232-21313279)
chr3 (135-201)||(33753637-33753703)
chr3 (71-126)||(36461282-36461337)
chr3 (68-115)||(48199980-48200027)
chr3 (76-118)||(21289664-21289706)
chr3 (36-126)||(24396306-24396396)
chr3 (76-126)||(38142713-38142763)
chr3 (76-126)||(51487270-51487320)
chr3 (22-115)||(6910227-6910320)
chr3 (77-118)||(9998663-9998704)
chr3 (77-118)||(10108432-10108473)
chr3 (77-118)||(10229672-10229713)
chr3 (81-118)||(43488445-43488482)
chr3 (71-115)||(40556901-40556945)
chr3 (71-115)||(45568290-45568334)
[»] chr7 (54 HSPs)
chr7 (36-126)||(433481-433571)
chr7 (21-126)||(26492562-26492668)
chr7 (21-126)||(46822212-46822318)
chr7 (22-126)||(34773908-34774013)
chr7 (22-126)||(45198808-45198913)
chr7 (21-116)||(23085728-23085824)
chr7 (36-126)||(7640565-7640655)
chr7 (22-126)||(32684865-32684970)
chr7 (36-118)||(22927660-22927742)
chr7 (22-126)||(35495950-35496055)
chr7 (36-108)||(1485046-1485118)
chr7 (36-119)||(2843031-2843114)
chr7 (36-126)||(20116778-20116868)
chr7 (21-126)||(42066836-42066942)
chr7 (21-126)||(21266587-21266695)
chr7 (30-119)||(23786779-23786868)
chr7 (36-123)||(26583910-26583997)
chr7 (21-126)||(14627672-14627777)
chr7 (24-113)||(42311488-42311578)
chr7 (21-110)||(1448606-1448696)
chr7 (36-126)||(31235574-31235664)
chr7 (36-126)||(46339251-46339341)
chr7 (40-119)||(13592304-13592382)
chr7 (21-126)||(6559074-6559180)
chr7 (36-126)||(32521719-32521809)
chr7 (49-103)||(48208154-48208208)
chr7 (36-115)||(35261505-35261584)
chr7 (36-126)||(17611588-17611678)
chr7 (21-126)||(23425147-23425253)
chr7 (69-126)||(24351182-24351239)
chr7 (71-126)||(19404602-19404657)
chr7 (24-114)||(35667009-35667100)
chr7 (67-126)||(42408534-42408593)
chr7 (64-126)||(17222818-17222880)
chr7 (36-126)||(37849036-37849126)
chr7 (71-118)||(8001391-8001438)
chr7 (71-126)||(34899452-34899507)
chr7 (36-126)||(6002224-6002314)
chr7 (21-118)||(37837250-37837350)
chr7 (71-115)||(40993359-40993403)
chr7 (71-126)||(28407763-28407818)
chr7 (76-119)||(39707628-39707671)
chr7 (71-118)||(48316657-48316704)
chr7 (22-111)||(20083550-20083640)
chr7 (36-94)||(43369564-43369622)
chr7 (77-126)||(28476417-28476466)
chr7 (61-102)||(36143965-36144006)
chr7 (36-85)||(46818194-46818243)
chr7 (77-126)||(48208098-48208147)
chr7 (68-116)||(26610622-26610670)
chr7 (71-115)||(26623634-26623678)
chr7 (137-197)||(38485873-38485933)
chr7 (71-115)||(42978812-42978856)
chr7 (79-119)||(46918744-46918784)
[»] chr1 (64 HSPs)
chr1 (36-126)||(7342923-7343013)
chr1 (21-126)||(9686979-9687085)
chr1 (36-126)||(51868435-51868525)
chr1 (21-115)||(30879287-30879382)
chr1 (36-126)||(9172691-9172781)
chr1 (36-126)||(9180673-9180763)
chr1 (36-126)||(11454138-11454228)
chr1 (36-126)||(19715685-19715775)
chr1 (36-126)||(19723514-19723604)
chr1 (36-126)||(25406074-25406164)
chr1 (36-126)||(45805619-45805709)
chr1 (36-126)||(50165889-50165979)
chr1 (36-126)||(51872064-51872154)
chr1 (36-115)||(11709497-11709576)
chr1 (21-126)||(5324333-5324438)
chr1 (21-126)||(20266503-20266609)
chr1 (21-126)||(31837035-31837141)
chr1 (49-126)||(5701460-5701537)
chr1 (22-126)||(35584398-35584502)
chr1 (21-126)||(45425841-45425946)
chr1 (36-124)||(39987622-39987709)
chr1 (36-126)||(33291208-33291298)
chr1 (21-126)||(34519329-34519435)
chr1 (21-126)||(48217638-48217744)
chr1 (43-126)||(9919589-9919671)
chr1 (36-126)||(32676925-32677015)
chr1 (47-126)||(40880814-40880893)
chr1 (36-115)||(50271930-50272009)
chr1 (54-115)||(28035351-28035410)
chr1 (36-126)||(31130383-31130473)
chr1 (21-126)||(38520309-38520415)
chr1 (36-126)||(50148571-50148661)
chr1 (21-119)||(27914881-27914977)
chr1 (36-126)||(3871609-3871698)
chr1 (36-109)||(40646893-40646964)
chr1 (67-126)||(7997990-7998049)
chr1 (36-99)||(30818154-30818217)
chr1 (21-115)||(41081478-41081573)
chr1 (36-126)||(44637618-44637708)
chr1 (56-126)||(27872938-27873008)
chr1 (21-126)||(33816942-33817048)
chr1 (21-126)||(33876412-33876518)
chr1 (76-118)||(44543472-44543514)
chr1 (69-126)||(47133095-47133152)
chr1 (77-125)||(15431517-15431565)
chr1 (24-115)||(24583153-24583247)
chr1 (24-115)||(24583349-24583443)
chr1 (76-115)||(49627116-49627155)
chr1 (76-126)||(31919181-31919231)
chr1 (141-201)||(2987832-2987892)
chr1 (71-123)||(4413309-4413361)
chr1 (68-115)||(39927377-39927424)
chr1 (63-126)||(48365583-48365646)
chr1 (79-118)||(49504448-49504487)
chr1 (67-118)||(50730823-50730874)
chr1 (80-118)||(7836650-7836688)
chr1 (69-126)||(32678986-32679041)
chr1 (76-126)||(36775560-36775610)
chr1 (135-201)||(37582408-37582474)
chr1 (62-115)||(5600968-5601021)
chr1 (21-81)||(14545721-14545782)
chr1 (78-115)||(44915842-44915879)
chr1 (137-201)||(4652095-4652159)
chr1 (78-118)||(29738516-29738556)
[»] scaffold0443 (1 HSPs)
scaffold0443 (36-126)||(4402-4492)
[»] scaffold0146 (1 HSPs)
scaffold0146 (21-126)||(16094-16200)
[»] scaffold0003 (1 HSPs)
scaffold0003 (36-126)||(361589-361679)
[»] scaffold0022 (1 HSPs)
scaffold0022 (22-126)||(83212-83316)
[»] scaffold0014 (1 HSPs)
scaffold0014 (22-116)||(201148-201243)
[»] scaffold0311 (1 HSPs)
scaffold0311 (36-126)||(8888-8978)
[»] scaffold0495 (1 HSPs)
scaffold0495 (38-126)||(5595-5686)
[»] scaffold0009 (1 HSPs)
scaffold0009 (71-126)||(57933-57988)
[»] scaffold0136 (1 HSPs)
scaffold0136 (71-118)||(9887-9934)
[»] scaffold0445 (1 HSPs)
scaffold0445 (71-126)||(1533-1588)
[»] scaffold0113 (1 HSPs)
scaffold0113 (36-115)||(36480-36559)
[»] scaffold0884 (1 HSPs)
scaffold0884 (71-113)||(1818-1860)
[»] scaffold0017 (1 HSPs)
scaffold0017 (77-126)||(32598-32647)
[»] scaffold0372 (1 HSPs)
scaffold0372 (42-114)||(9467-9539)


Alignment Details
Target: chr2 (Bit Score: 106; Significance: 3e-53; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 21 - 201
Target Start/End: Complemental strand, 6174122 - 6173927
Alignment:
Q  21 gacaaaaacaaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac------ 114  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||          
T  6174122 gacaaaaacaaaatttattcatttattcaaatcgagagattatatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatc 6174023  T
Q  115 ---------agcattcaagtttggtgggttccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
             | ||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  6174022 caagttaataacatccaagtttgatgggttccttatgggtgctgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccacctatatac 6173927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 83971 - 84061
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  83971 tattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 84061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 9986116 - 9986222
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  9986116 gacaaaaacaaaatgatattcattcatccaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacat 9986215  T
Q  120 tcaagtt 126  Q
     ||||||    
T  9986216 ccaagtt 9986222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 20046872 - 20046962
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  20046872 tattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaaatcacagcatccaagtt 20046962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 27248925 - 27249031
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  27248925 gacaaaaacaaaatgatattcattcattcaaatcgagagattatatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacat 27249024  T
Q  120 tcaagtt 126  Q
     ||||||    
T  27249025 ccaagtt 27249031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 36234305 - 36234199
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||    
T  36234305 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacat 36234206  T
Q  120 tcaagtt 126  Q
     ||||||    
T  36234205 ccaagtt 36234199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 4228429 - 4228324
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||     
T  4228429 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatc 4228330  T
Q  121 caagtt 126  Q
    ||||||    
T  4228329 caagtt 4228324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 21570183 - 21570288
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||    
T  21570183 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggctgaatctgcgaacaaacttacagcatt 21570282  T
Q  121 caagtt 126  Q
    ||||||    
T  21570283 caagtt 21570288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 30420960 - 30420870
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||    
T  30420960 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 30420870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 7015485 - 7015591
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||| ||| ||| ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||    
T  7015485 gacaaaaacaaaatgatatttattcattcaaatcgagagattacatcattcaacacagctaaaaacgtaacgaatgaatctgcgaacaaactcacagcat 7015584  T
Q  120 tcaagtt 126  Q
     ||||||    
T  7015585 ccaagtt 7015591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 8806157 - 8806067
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| ||| ||||||    
T  8806157 tattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctgcgaacaatctcacaacatccaagtt 8806067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 8971402 - 8971508
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  ||| |||| ||| ||||||||||||||||||||||||||||||||| || ||||||||||||| |||| |||||||||||||||    
T  8971402 gacaaaaacaaaatgatatccattcattcaaatcgagagattacatcattcaacaccgctaagaatgtaaaggatgaatatgcgaacaaactcacagcat 8971501  T
Q  120 tcaagtt 126  Q
     ||||||    
T  8971502 ccaagtt 8971508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 22422035 - 22421929
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||  |||||||| |||||||||||||||||||||||||||| | |||||||||||||||    
T  22422035 gacaaaaacaaaatgatattcattcattcaaatcgagagattatgtcattcaataccgctaaaaacgtaaaggatgaatctgtgaacaaactcacagcat 22421936  T
Q  120 tcaagtt 126  Q
     ||||||    
T  22421935 ccaagtt 22421929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 31580429 - 31580535
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||| |||    
T  31580429 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattgtacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacatcat 31580528  T
Q  120 tcaagtt 126  Q
     ||||||    
T  31580529 ccaagtt 31580535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 4193144 - 4193048
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 116  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||    
T  4193144 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacgccgctaaaaacgtaaaggatgaatctccgaacacactcacag 4193048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 33228778 - 33228857
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  33228778 tattcattcattcaaatcgagagattatatcattcaacaccgctaaaaacgtaacggatgaatctgcgaacaaactcaca 33228857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 40625834 - 40625937
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 122  Q
    |||||||||||  |||||||  ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| | ||||||    
T  40625834 aaaaacaaaatgatattcatccattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaatgatgaatctgcgaacaaactcataacattca 40625933  T
Q  123 agtt 126  Q
    ||||    
T  40625934 agtt 40625937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 7558743 - 7558653
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||||| ||||| ||||||    
T  7558743 tattcattcattcaaatcgagagattacatcatttaacaccactaaaaacgtaaaggatgaatttgcgaacaaactcatagcatccaagtt 7558653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 21132123 - 21132033
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||||    
T  21132123 tattcattcattcaaatcgaaaaattacatcattcaacaccgctaaaaacgtaagggatgaatctgcgaacaaactcacaacatttaagtt 21132033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 25087342 - 25087237
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||| |||    
T  25087342 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccact-aaaacgtaaaggatgaatctgggaacaaactcacatcat 25087244  T
Q  120 tcaagtt 126  Q
     ||||||    
T  25087243 ccaagtt 25087237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 34600521 - 34600415
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  ||| |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||| || |||    
T  34600521 gacaaaaacaaaatgatatccattcattcaaatcgagagattacatcgttcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcgcatcat 34600422  T
Q  120 tcaagtt 126  Q
     ||||||    
T  34600421 ccaagtt 34600415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 41431319 - 41431229
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | ||||||||| ||| ||||||    
T  41431319 tattcattcattcaaatcgagagattacattattcaacaccgctaaaaacgtaaaggataaatctgcgaataaactcacaacatccaagtt 41431229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 3725487 - 3725406
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctg 101  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  3725487 gacaaaaacaaaatgatattcatttattcaaatcgagagattacatcatttaacaccactaaaaacgtaaaggatgaatctg 3725406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 38575263 - 38575363
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 122  Q
    |||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||| ||    
T  38575263 aaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgct-aaaacataaaggatgaatctgcgaacaaactcacaacatcca 38575361  T
Q  123 ag 124  Q
    ||    
T  38575362 ag 38575363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 27949730 - 27949627
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 122  Q
    |||||||||||  |||||||| ||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| ||    
T  27949730 aaaaacaaaatgatattcattcatttaaatcgagatattatatcattcaacaccgctaaaaacgtaaatgatgaatctccgaacaaactcacaacatcca 27949631  T
Q  123 agtt 126  Q
    ||||    
T  27949630 agtt 27949627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 40659746 - 40659812
Alignment:
Q  60 ttacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  40659746 ttacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 40659812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 2808247 - 2808352
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||  ||||||||||| |||||||||||||||||||||||||| | || |||||||| |||    
T  2808247 gacaaaaacaaaatgatattcattcattcaaatcgagagattgtatcattcaacatcgctaaaaacgtaaaggatgaatctgtgaac-aactcacatcat 2808345  T
Q  120 tcaagtt 126  Q
     ||||||    
T  2808346 ccaagtt 2808352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 3268625 - 3268715
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||||||  |||| || ||||||||  ||||||||||||||| ||||||    
T  3268625 tattcattcattcaaatcgagagattatatcattcaacaccgctaaaaatataaatgacgaatctgcaaacaaactcacagcatccaagtt 3268715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 45128483 - 45128426
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaagga 93  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  45128483 tattcattaattcaaatcgagagattacatcattcaacaccgctaaaaacataaagga 45128426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 17319584 - 17319533
Alignment:
Q  63 catcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 114  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  17319584 catcattcaacaccggtaaaaacgtaaaggatgaatctgcgaacaaactcac 17319533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 9374353 - 9374420
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 103  Q
    |||||||| ||| ||||||| ||| ||||||||||||||| |||||||||||||| ||||||| ||||    
T  9374353 tattcattcattcaaatcgacagagtacatcattcaacacggctaaaaacgtaaatgatgaatatgcg 9374420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 31788710 - 31788655
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  31788710 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcatccaagtt 31788655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 4779061 - 4778960
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatca--ttcaa-caccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 116  Q
    ||||||||||||| | |||||||| ||| ||||||| ||| |||||||  | ||| || ||||||||||||||||| |||||||||| ||||||||||||    
T  4779061 gacaaaaacaaaactatattcattcattcaaatcgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacag 4778962  T
Q  117 ca 118  Q
    ||    
T  4778961 ca 4778960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 12236848 - 12236925
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactca 113  Q
    |||||||| ||| |||| ||||||||| |||||||| ||| |||||||| |||||| ||||||||||| | |||||||    
T  12236848 tattcattcatttaaattgagagattatatcattcagcactgctaaaaatgtaaagaatgaatctgcgaataaactca 12236925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 30923250 - 30923355
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| |||| || ||| ||||||||| ||||  ||||||| ||||||  ||||||||||| ||||||| ||| ||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgatagagtacatcatttaacattgctaaaatcgtaaataatgaatctgcgaacaaacttacaacatt 30923349  T
Q  121 caagtt 126  Q
    ||||||    
T  30923350 caagtt 30923355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 29044053 - 29043993
Alignment:
Q  141 tgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    |||||||||||||||||||||||| | ||||| ||||||||  ||||||||| ||||||||    
T  29044053 tgggtgttgatcgcaggggtgtctttgttggtttttgttttcaggtgttccgcctatatac 29043993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 29173563 - 29173607
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| |||||||||||||||||||||||||||| |||||||||||    
T  29173563 aacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 29173607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 17151670 - 17151623
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  17151670 taaaaacgtaaagggtgaatatgcggacaaactcacaacattcaagtt 17151623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 24461731 - 24461653
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| |||| || ||| ||||| || ||||| |||||||||||||||||||||| ||||| |||||||||||    
T  24461731 tattcattcattcaaattgatagaatacataat-caacatcgctaaaaacgtaaaggatgaacctgcgaacaaactcaca 24461653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 38445412 - 38445373
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  38445412 taaaaacgtaaaggatgaatctgcgaacaaactcacagca 38445373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 41712579 - 41712658
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| |||| || | |||||||||||||||| | ||||||| ||||| ||| |||||||| |||||||||||    
T  41712579 tattcattcatttaaattgaaaaattacatcattcaacatcactaaaaatgtaaatgataaatctgcgaacaaactcaca 41712658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 4100622 - 4100545
Alignment:
Q  36 tattcatttattaaaatcgagagattacat-cattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| ||||||| ||||||||| ||   |||| ||||||||||||||||| |||||||||| |||||||||||    
T  4100622 tattcattcattcaaatcgatagattacataca---aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 4100545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 17248998 - 17249040
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  17248998 cgctaaaaacgtaaatgatgaatctgcgaacaaactcacagca 17249040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 27477419 - 27477349
Alignment:
Q  56 gagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||||||  | |||||| ||||| |||||||||||| ||| ||||||| ||| ||||||    
T  27477419 gagattacatcattcaacattgttaaaaatgtaaatgatgaatctgcgaacatactcacaacatccaagtt 27477349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 32197567 - 32197633
Alignment:
Q  61 tacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagttt 127  Q
    ||||||||||||||||||||||||  || ||||| ||| |||| ||||||||||| ||| |||||||    
T  32197567 tacatcattcaacaccgctaaaaatatataggataaatatgcgaacaaactcacaacatccaagttt 32197633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 36324141 - 36324055
Alignment:
Q  40 catttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| |||| || | |||||||||||||||| || ||||||||||| ||||||||  ||| ||||| ||||| ||| ||||||    
T  36324141 catttattcaaattgatatattacatcattcaacatcgttaaaaacgtaacggatgaatacgcgaacaaattcacaacatccaagtt 36324055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 39641121 - 39641186
Alignment:
Q  61 tacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||   |||||||||||||| |||||| |||| ||||||||||| ||| ||||||    
T  39641121 tacatcattcaacaatactaaaaacgtaaagaatgaatttgcgaacaaactcacatcatccaagtt 39641186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 37613916 - 37613992
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactc 112  Q
    |||||||  ||| ||||||| ||| ||||  |||||||| ||||||||  |||||||||||||||||| ||||||||    
T  37613916 tattcatccattcaaatcgatagagtacactattcaacatcgctaaaatagtaaaggatgaatctgcgaacaaactc 37613992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 5427715 - 5427762
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| |||||||| |||||||| |||||||||| ||||||||||||||    
T  5427715 aacatcgctaaaagcgtaaagggtgaatctgcgaacaaactcacagca 5427762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 18763717 - 18763678
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  18763717 cgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 18763678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 36942968 - 36943015
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| ||||||||||||||||| |||||||||| ||| ||||||||||    
T  36942968 aacatcgctaaaaacgtaaagggtgaatctgcgaacatactcacagca 36943015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 35220577 - 35220535
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||    
T  35220577 cgctaaaaacgtaaagggtgaatatgcgaacaaactcacagca 35220535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 281042 - 281005
Alignment:
Q  81 aaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  281042 aaaacgtaaagggtgaatctgcgaacaaactcacagca 281005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 459066 - 459142
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactca 113  Q
    |||||||| ||| ||||||| ||| || ||||||||||||| |||||||| |||| ||| ||||| || |||||||||    
T  459066 tattcattcattcaaatcgatagagtatatcattcaacaccactaaaaacataaaagat-aatctacgaacaaactca 459142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 4903997 - 4904046
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||| ||||||| || ||||||||||| ||| ||||||    
T  4903997 gctaaaaacgtaaaggctgaatctacgaacaaactcacaacatccaagtt 4904046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 32678939 - 32678980
Alignment:
Q  74 accgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||| |||| |||||||||||| |||||||||||    
T  32678939 accgctaaaaacataaatgatgaatctgcgaacaaactcaca 32678980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 4041448 - 4041484
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||| |||||||||| |||||||||||    
T  4041448 taaaaacgtaaagggtgaatctgcgaacaaactcaca 4041484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 8809526 - 8809478
Alignment:
Q  78 ctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||| |||| ||||||| ||||||||||| ||| ||||||    
T  8809526 ctaaaaacgtaaaagatggatctgcgaacaaactcacaacatccaagtt 8809478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 18681386 - 18681450
Alignment:
Q  137 cttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    ||||||||||||||| |||| ||| ||| | || || |||||||| |||||||||| ||||||||    
T  18681386 cttatgggtgttgattgcagaggtttctttgttagtatttgttttcgggtgttccgcctatatac 18681450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 23903626 - 23903554
Alignment:
Q  42 tttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 114  Q
    |||||| |||| || |||||||||||||||| | || |||||| | ||||||||| | |||| ||||||||||    
T  23903626 tttattcaaattgatagattacatcattcaagatcgttaaaaatggaaaggatgagtttgcgaacaaactcac 23903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 26025270 - 26025334
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaa 84  Q
    ||||||||||||||  |||||||| ||| |||| ||||||||| |||||||||||  ||||||||    
T  26025270 gacaaaaacaaaatgatattcattcattcaaattgagagattatatcattcaacattgctaaaaa 26025334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 31128638 - 31128686
Alignment:
Q  78 ctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||| ||||||||| |||||||| ||||||||||| ||| ||||||    
T  31128638 ctaaaaatgtaaaggattaatctgcgaacaaactcacaacatccaagtt 31128686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 32913489 - 32913441
Alignment:
Q  78 ctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| ||||||||||||||||||| ||| ||||||| ||| ||||||    
T  32913489 ctaaaatcgtaaaggatgaatctgcgaacatactcacaacatccaagtt 32913441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 33585589 - 33585625
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||||||||| |||| |||||||||||    
T  33585589 taaaaacgtaaaggatgaatatgcgaacaaactcaca 33585625  T

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Target: chr6 (Bit Score: 79; Significance: 4e-37; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 8497271 - 8497165
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8497271 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcat 8497172  T
Q  120 tcaagtt 126  Q
     ||||||    
T  8497171 ccaagtt 8497165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 12653247 - 12653141
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||    
T  12653247 gacaaaaacaaaatgatattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtacaggatgaatctgcgaacaaactcacaacat 12653148  T
Q  120 tcaagtt 126  Q
     ||||||    
T  12653147 ccaagtt 12653141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 25064523 - 25064433
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  25064523 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 25064433  T

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Target: chr6; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 7875821 - 7875924
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 122  Q
    |||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| ||    
T  7875821 aaaaacaaaatgatattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaagtcacagcatcca 7875920  T
Q  123 agtt 126  Q
    ||||    
T  7875921 agtt 7875924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 7880879 - 7880982
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 122  Q
    |||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| ||    
T  7880879 aaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaagtcacagcatcca 7880978  T
Q  123 agtt 126  Q
    ||||    
T  7880979 agtt 7880982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 16419445 - 16419355
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || |||||||    
T  16419445 tattcatttattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacaacaatcaagtt 16419355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 17237076 - 17237166
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||    
T  17237076 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacacactcacaacatccaagtt 17237166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 17335040 - 17334950
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||    
T  17335040 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatccaagtt 17334950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 23947091 - 23947197
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||    
T  23947091 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacgccgctaaaaacgtaaaggatgaatctacgaacaaactcacaacat 23947190  T
Q  120 tcaagtt 126  Q
     ||||||    
T  23947191 ccaagtt 23947197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 4088762 - 4088657
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| |||| |||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  4088762 acaaaaacaaaatgatattcattcattcaaattgagagattatttcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatc 4088663  T
Q  121 caagtt 126  Q
    ||||||    
T  4088662 caagtt 4088657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 4984357 - 4984432
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaact 111  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4984357 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaact 4984432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 8196197 - 8196287
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||| ||||||||||| ||||||    
T  8196197 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatttgcgaacacactcacagcatccaagtt 8196287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 12059563 - 12059653
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  12059563 tattcattcatttaaatcaagagattatatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 12059653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 33740355 - 33740447
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||  |||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  33740355 aaaaacaaaataatattcattcatttaaatcaagagattacatcattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 33740447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 8027908 - 8027987
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  8027908 tattcattcattcaaatcgagagattacattattcaacaccgctaaaaacgtaaaggatgaatttgcgaacaaactcaca 8027987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 3173986 - 3174082
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 116  Q
    ||||||||||||||  ||||| || ||| ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  3173986 gacaaaaacaaaataatattcgttcattcaaatcgaaaaattacatcattcaacaccgctaagaacgtaaaggatgaatctgcgaacaaactcacag 3174082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 4468853 - 4468761
Alignment:
Q  23 caaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 114  Q
    ||||||||||||  |||||||| ||| |||||||||| ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  4468853 caaaaacaaaatgatattcattcatttaaatcgagagtttacatcattcaacaccgctaaaagtgtaaaggatgaatctgcgaacaaactcac 4468761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 28634903 - 28634993
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||| || ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||| ||||||    
T  28634903 tattcattcattcaaatcgataggttacatcattcaacatcgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacatccaagtt 28634993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 35001877 - 35001787
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||| | |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| ||| ||||||    
T  35001877 tattcattcattcaaatcaaaagattacatcattcaacatcgctaaaaacgtaaaggattaatctgcgaacaaactcacaacatccaagtt 35001787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 16892619 - 16892681
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaact 111  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||    
T  16892619 aaatcgagagattacatcattcaacaccactaaaaacgtaaatgatgattctgcgaacaaact 16892681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 12168965 - 12168888
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| |||||||||  |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||    
T  12168965 tattcattcattcaaatcgaga--ttacatcattcaacaccgctaaaaacttaaaggatgaatctgctaataaactcaca 12168888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 10228967 - 10228876
Alignment:
Q  38 ttcatttattaaaatcgagagat---tacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| ||| ||||||||||||   || |||||||||||||| |||||||||||||||||||| |||| ||||||| |||| || ||||||    
T  10228967 ttcattcattcaaatcgagagataattatatcattcaacaccgttaaaaacgtaaaggatgaatttgcgaacaaacttacagtatccaagtt 10228876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 33110894 - 33110808
Alignment:
Q  40 catttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||| |||||||| ||||| |||||||||||| || ||||||||||||||||||| |||  | ||||||||| ||| ||||||    
T  33110894 cattcattcaaatcgagtgattatatcattcaacactgccaaaaacgtaaaggatgaatatgcaaataaactcacaacatccaagtt 33110808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 7028158 - 7028085
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaagga 93  Q
    ||||||||||||||  |||||||| ||| |||||||||||||| |||||||||||||||| |||| | ||||||    
T  7028158 gacaaaaacaaaatgatattcattcattcaaatcgagagattatatcattcaacaccgctgaaaatgcaaagga 7028085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 34489501 - 34489428
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatga 96  Q
    |||||||||||  |||| ||| ||| ||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  34489501 aaaaacaaaatgatatttattcattcaaatcgatagattacattattcaaaaccgctaaaaacgtaaaggatga 34489428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 27774906 - 27774966
Alignment:
Q  141 tgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    ||||||||||||| ||| |||||| | ||||||||||||||||| |||||| |||||||||    
T  27774906 tgggtgttgatcgtaggagtgtctttgttggtgtttgtttttggatgttccatctatatac 27774966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 6946946 - 6946879
Alignment:
Q  135 tccttatgggtgttgatcgcaggggtgtctcttttggtg-tttgtttttgggtgttccgtctatatac 201  Q
    ||||||||||||||||||||| |||||||| | |||||| |||||||| | ||||||| |||||||||    
T  6946946 tccttatgggtgttgatcgcaagggtgtctttgttggtgttttgttttcgagtgttccatctatatac 6946879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 546271 - 546229
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  546271 cgctaaaaacgtataggatgaatctgcgaacaaactcacagca 546229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 606503 - 606402
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatca--ttcaa-caccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 116  Q
    ||||||||||||||  |||||||| ||| ||||||| ||| |||||||  | ||| || || |||||||||||||| |||||||||| ||||||||||||    
T  606503 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacag 606404  T
Q  117 ca 118  Q
    ||    
T  606403 ca 606402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 12794422 - 12794488
Alignment:
Q  135 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    ||||| ||||||||||||||||  |||||| | |||||||| ||||| || ||||||||||||||||    
T  12794422 tccttttgggtgttgatcgcagatgtgtctttgttggtgttcgttttcggatgttccgtctatatac 12794488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 67852 - 67893
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||||| |||||||||| ||||||||||||||    
T  67852 gctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 67893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 9224240 - 9224304
Alignment:
Q  136 ccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    ||||||||| ||||||||||||| ||||| | ||||||||| |||| ||||||||| |||||||||    
T  9224240 ccttatggg-gttgatcgcagggatgtctttgttggtgtttattttcgggtgttccttctatatac 9224304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 33053019 - 33053068
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||| ||||| |||| ||||||||||||||| ||||||    
T  33053019 gctaaaaacgtaaagggtgaatatgcgaacaaactcacagcatccaagtt 33053068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 8518921 - 8518997
Alignment:
Q  50 aatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||| ||||||||||||| | ||||||||||| | ||||||||| | |||  |||||| ||||||||||    
T  8518921 aatcaagagattgcatcattcaacacggttaaaaacgtaaggaatgaatctgtgaacactctcacaccattcaagtt 8518997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 6957389 - 6957342
Alignment:
Q  68 ttcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  6957389 ttcaacatcgctaaaaacgtaaagggtgaatctgtgaacaaactcaca 6957342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 23128863 - 23128816
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| ||||||||| ||||||| |||||||||| ||||||||||||||    
T  23128863 aacatcgctaaaaatgtaaagggtgaatctgcgaacaaactcacagca 23128816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 30776903 - 30776864
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  30776903 cgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 30776864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 30894843 - 30894789
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| |||||||||||||||||||||||||||  | ||||||||||||| ||||||    
T  30894843 aacatcgctaaaaacgtaaaggatgaatctgc-aataaactcacagcatccaagtt 30894789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 32327065 - 32327112
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| ||||||||||||||||| ||||| |||| ||||||||||||||    
T  32327065 aacatcgctaaaaacgtaaagggtgaatatgcgaacaaactcacagca 32327112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 1933545 - 1933579
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactca 113  Q
    ||||||||||||||||||||||||| |||||||||    
T  1933545 taaaaacgtaaaggatgaatctgcgaacaaactca 1933579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 9341502 - 9341540
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  9341502 gctaaaaacgtaaagggtgaatctgcgaacaaactcaca 9341540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 15612366 - 15612440
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaa 97  Q
    |||||||||| | |||||||| ||| | ||||| | | |||||||||||||||| ||||||||||||| ||||||    
T  15612366 aaaaacaaaactatattcattcattcagatcgataaagtacatcattcaacaccactaaaaacgtaaaagatgaa 15612440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 20619708 - 20619662
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaa 82  Q
    |||||||| ||| ||||| |||||||| |||||||||||||||||||    
T  20619708 tattcattcatttaaatcaagagattatatcattcaacaccgctaaa 20619662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 14174922 - 14174971
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||| | |||||||||| ||||||||||| || |||||||    
T  14174922 gctaaaaacgtaaaaggtgaatctgcgaacaaactcacatcactcaagtt 14174971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 14179458 - 14179507
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||| | |||||||||| ||||||||||| || |||||||    
T  14179458 gctaaaaacgtaaaaggtgaatctgcgaacaaactcacatcactcaagtt 14179507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 3913419 - 3913463
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| || ||||||| |||||||||||    
T  3913419 aacatcgctaaaaacgtaaagggtgcatctgcgaacaaactcaca 3913463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 7515052 - 7515092
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacag 116  Q
    ||||||||||||||||| ||||| |||| ||||||||||||    
T  7515052 cgctaaaaacgtaaagggtgaatttgcgaacaaactcacag 7515092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 30493777 - 30493733
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| |||||||||| ||||| |||||    
T  30493777 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaattcaca 30493733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 4e-37; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 9528651 - 9528757
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  9528651 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacat 9528750  T
Q  120 tcaagtt 126  Q
    |||||||    
T  9528751 tcaagtt 9528757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 53616425 - 53616530
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||     
T  53616425 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatc 53616524  T
Q  121 caagtt 126  Q
    ||||||    
T  53616525 caagtt 53616530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 20569572 - 20569477
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20569572 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 20569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 25274198 - 25274103
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25274198 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 25274103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 2115362 - 2115468
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  2115362 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggatgaatctgcgaacaaactcacagtat 2115461  T
Q  120 tcaagtt 126  Q
     ||||||    
T  2115462 ccaagtt 2115468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 38706484 - 38706590
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||    
T  38706484 gacaaaaacaaaatcatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacatcat 38706583  T
Q  120 tcaagtt 126  Q
     ||||||    
T  38706584 ccaagtt 38706590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 9645299 - 9645404
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||| ||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||     
T  9645299 acaaaaacaaaataatatttattcattcaaatcgagagattacatcattcaacaccgcaaaaaacgtaaaggatgaatctgcgaacaaactcacagcatc 9645398  T
Q  121 caagtt 126  Q
    ||||||    
T  9645399 caagtt 9645404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 47417948 - 47417871
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  47417948 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacagcattcaagtt 47417871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 44947708 - 44947621
Alignment:
Q  39 tcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  44947708 tcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 44947621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 34024228 - 34024318
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  34024228 tattcattcattcaaatcgagagattacaccattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 34024318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 45227831 - 45227921
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||    
T  45227831 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatccaagtt 45227921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 50766302 - 50766392
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||    
T  50766302 tattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtagatgatgaatctacgaacaaactcacagcattcaagtt 50766392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 56199395 - 56199305
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  56199395 tattcattcattcaaatcgagagatcacatcattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 56199305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 9284226 - 9284131
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||    
T  9284226 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctacgaacaaactcaca 9284131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 43444691 - 43444604
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaa 123  Q
    |||||||| ||| |||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||    
T  43444691 tattcattcattcaaattgagagattacatcattcaacaccgttaagaacgtaaaggatgaatctgcgaacaaactcacagcattcaa 43444604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 4644157 - 4644067
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| ||| ||||||    
T  4644157 tattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctgcgaacaagctcacaacatccaagtt 4644067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 51318284 - 51318194
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| ||| ||||||    
T  51318284 tattcattcatttaaatcgagagattacatcattcaacactgctaaaaacgtaaaggatgaatctgtgaacaaactcacatcatccaagtt 51318194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 1532207 - 1532117
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| |||||| ||| ||||||    
T  1532207 tattcattcattcaaatcgagagattacgtcattcaacaccgctaaaaacataaaggatgaatctgcgaacaagctcacaacatccaagtt 1532117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 10359323 - 10359428
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||    
T  10359323 gacaaaaacaaaatgatattcattcatccaaatcgagagattacatcattcaacaccgctaaaaacgtaaa-gatgaatttgcgaacaaactcacatcat 10359421  T
Q  120 tcaagtt 126  Q
     ||||||    
T  10359422 ccaagtt 10359428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 10389544 - 10389634
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||  || ||||||||||||||| ||||||    
T  10389544 tattcattcattcaaatcgagagattacaccattcaacaccgctaaaaacataaaggatgaatccacgaacaaactcacagcatccaagtt 10389634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 3335954 - 3336044
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||| | ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||||||||    
T  3335954 tattcattcattcaaatcaatagagtacatcattcaacaccgctaaaaacgtaaaggatgaatctgcaaacaaactcaaaacattcaagtt 3336044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 21090428 - 21090362
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  21090428 aaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcaaacaaactcaca 21090362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 29966625 - 29966535
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||| ||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  29966625 tattcattcatttaaatcaagaaattacatcattcaacatcgttaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 29966535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 46990921 - 46991011
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||| ||| ||||||||||||| || ||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  46990921 tattcattcattcaaatcgatagagtacatcattcaacgccactaaaaacgtaaatgatgaatctgcgaacaaactcacaacattcaagtt 46991011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 37188398 - 37188475
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||| ||||||||||| ||||||    
T  37188398 aaatcgagagattacatcattcaacaccgctaaaaacgcaaaagataaatctgcgaacacactcacagcatccaagtt 37188475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 49410500 - 49410432
Alignment:
Q  58 gattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||    
T  49410500 gattacatcattcaacaccgctaaaaacgtaaaggatgaatcagcgaacaaactcacatcatccaagtt 49410432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 6973122 - 6973019
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 122  Q
    |||||||||||  |||||||| ||| |||| ||||| |||||||||||||||||| |||||| || ||||||||||||| | ||||||||| ||||| ||    
T  6973122 aaaaacaaaatgatattcattcatttaaattgagaggttacatcattcaacaccgttaaaaatgtgaaggatgaatctgtgaacaaactcatagcatcca 6973023  T
Q  123 agtt 126  Q
    ||||    
T  6973022 agtt 6973019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 49680829 - 49680766
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatc 99  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  49680829 tattcattcatttaaatcgagaggttacatcattcaacaccgctaaaaacgtaaaggataaatc 49680766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 31381491 - 31381571
Alignment:
Q  22 acaaaaacaaaat-ttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 102  Q
    ||||||| ||||| |||||| || ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  31381491 acaaaaataaaatcttattcgttcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaa-gatgaatctgc 31381571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 47320204 - 47320304
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 117  Q
    ||||||||||||||| |||||||| ||| ||||||| ||| |||||||   |||| | |||||||||||||||| ||||||||||| |||||||||||||    
T  47320204 gacaaaaacaaaattatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaacgtaaagaatgaatctgcgaacaaactcacagc 47320303  T
Q  118 a 118  Q
    |    
T  47320304 a 47320304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 868462 - 868372
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||  || |||||||||||||| |||||| ||||||||||||||| |||||| |||||||| | ||||| |||||  |||||||||    
T  868462 tattcattcgtttaaatcgagagattatatcatttaacaccgctaaaaacataaaggttgaatctgtgaacaaaatcacaatattcaagtt 868372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 35261490 - 35261401
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||  || |||||||||||||||  |||||||||||||||||||||||||  ||||||||||| ||| ||||||    
T  35261490 tattcattcattcaaatcgat-gagtacatcattcaacacttctaaaaacgtaaaggatgaatctgcaaacaaactcacaacatccaagtt 35261401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 43153793 - 43153894
Alignment:
Q  22 acaaaaacaaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattc 121  Q
    |||||||||||   |||| ||| ||| ||||||||||||| |||||||||| | |||||||||||||||||||||||   || ||||||||||| ||| |    
T  43153793 acaaaaacaaatgatatttattcattcaaatcgagagattgcatcattcaatatcgctaaaaacgtaaaggatgaat---cgaacaaactcacaacatcc 43153889  T
Q  122 aagtt 126  Q
    |||||    
T  43153890 aagtt 43153894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 28857667 - 28857619
Alignment:
Q  69 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 117  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  28857667 tcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagc 28857619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 12265760 - 12265682
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| ||||||| || ||||||||||||||| |||||||||||| || |||||||||| | |||||||||||    
T  12265760 tattcattcattcaaatcgataggttacatcattcaacatcgctaaaaacgt-aatgatgaatctgtgaacaaactcaca 12265682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 52097706 - 52097796
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||| | ||| |||||||||| | ||||||||||||||||||| ||||| |||| | ||||||||| ||| ||||||    
T  52097706 tattcattcattcaaatcaacagagtacatcattcgataccgctaaaaacgtaaagggtgaatatgcgaataaactcacaacatccaagtt 52097796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 18138707 - 18138794
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||| | | | |||||||||||||||||||||||||||||||   || |||||| ||||||||||| ||| ||||||    
T  18138707 tattcattcattcaaatcaataaagtacatcattcaacaccgctaaaaacgtaaag---gagtctgcgaacaaactcacaacatccaagtt 18138794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 35800749 - 35800813
Alignment:
Q  137 cttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    ||||||||||||||||||| |||| | |   ||||||||||||||| ||||||||||||||||||    
T  35800749 cttatgggtgttgatcgcatgggtattttcgttggtgtttgtttttcggtgttccgtctatatac 35800813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 49125920 - 49126007
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||| | | | |||||||||||||||||||||||||||||||   || |||||| ||||||||||| ||| ||||||    
T  49125920 tattcattcattcaaatcaataaagtacatcattcaacaccgctaaaaacgtaaag---gagtctgcgaacaaactcacaacatccaagtt 49126007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 7273612 - 7273691
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| |||| || ||| || || ||||||||||| |||||||||||| ||| |||||||| |||||||||||    
T  7273612 tattcattcattcaaattgatagagtatattattcaacaccgttaaaaacgtaaatgataaatctgcgaacaaactcaca 7273691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 56040491 - 56040546
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||||||| ||||||    
T  56040491 aacatcgctaaaaacgtaaagggtgaatctgcgagcaaactcacagcatccaagtt 56040546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 22611442 - 22611400
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  22611442 cgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 22611400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 27652202 - 27652152
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||| |||||||||||||| ||||||||||| || |||||||    
T  27652202 cgctaaaaacgtataggatgaatctgcgaacaaactcacaacactcaagtt 27652152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 35851278 - 35851344
Alignment:
Q  135 tccttatgggtgttgatcgcaggggtgtctcttttggtg-tttgtttttgggtgttccgtctatata 200  Q
    ||||| |||||||||||||||||||||||| | ||| || |||||||||  ||||||||||||||||    
T  35851278 tccttttgggtgttgatcgcaggggtgtctttattgatgttttgtttttatgtgttccgtctatata 35851344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 43510455 - 43510413
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  43510455 cgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 43510413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 35964779 - 35964856
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||| |||  ||| |||||||||||||||||||||||||| |||| | |||| |||| |||||| ||| ||||||    
T  35964779 aaatcgatagaggacaccattcaacaccgctaaaaacgtaaagaatgagtttgcgaacaatctcacaacatccaagtt 35964856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 2521043 - 2520999
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||    
T  2521043 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 2520999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 2624750 - 2624671
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||| |||||||||||  || |||| |||||||| ||||||||||  ||||| |||||| |||| |||||||||||    
T  2624750 tatttattcattaaaatcgatggagtacaccattcaacgccgctaaaaaaataaagaatgaatttgcgaacaaactcaca 2624671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 6155063 - 6155110
Alignment:
Q  69 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 116  Q
    |||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  6155063 tcaacatcgctaaaaacataaagggtgaatctgcgaacaaactcacag 6155110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 115
Target Start/End: Original strand, 11299864 - 11299899
Alignment:
Q  80 aaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||||||||||||| |||||||||||    
T  11299864 aaaaacgtaaaggatgaatctgcgaacaaactcaca 11299899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 21554623 - 21554690
Alignment:
Q  59 attacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||| ||||||  ||||||||| |||||||||||| |||| |||||||||  |||| ||||||    
T  21554623 attacatcaatcaacattgctaaaaacataaaggatgaatatgcgaacaaactcattgcatccaagtt 21554690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 43077272 - 43077338
Alignment:
Q  135 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    ||||| || ||||||||||||||||||||| | ||||||||| ||||  ||||||| | ||||||||    
T  43077272 tccttttgagtgttgatcgcaggggtgtctttgttggtgtttattttcaggtgttctgcctatatac 43077338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 1621362 - 1621411
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||| ||| |||||||||| ||||||||||| ||| ||||||    
T  1621362 gctaaaaacgtatagggtgaatctgcgaacaaactcacaacatccaagtt 1621411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 4142615 - 4142656
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||| ||||||| |||||||||| ||||||||||||||    
T  4142615 gctaaaaatgtaaagggtgaatctgcgaacaaactcacagca 4142656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 8670781 - 8670717
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 103  Q
    |||||||| ||| ||||||| |||||||||||   |||| ||||||||||||||| | ||||||||||    
T  8670781 tattcattcattcaaatcgatagattacatca---aacatcgctaaaaacgtaaaaggtgaatctgcg 8670717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 22301100 - 22301059
Alignment:
Q  85 cgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||    
T  22301100 cgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 22301059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 26633523 - 26633560
Alignment:
Q  78 ctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  26633523 ctaaaaacgtaaagggtgaatctgcgaacaaactcaca 26633560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 43095885 - 43095848
Alignment:
Q  78 ctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  43095885 ctaaaaacgtaaatgatgaatctgcgaacaaactcaca 43095848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 19853365 - 19853401
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||| |||||||||| |||||||||||    
T  19853365 taaaaacgtaaagggtgaatctgcgaacaaactcaca 19853401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 19896416 - 19896523
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||  |||||||| ||| ||||  | ||| ||||||||  |||||| || |||||||||||| | |||||||||| ||||||||| | ||    
T  19896416 acaaaaacaaaatgatattcattcatttaaattaatagaatacatcataatcaacatcgttaaaaacgtaaatggtgaatctgcgaacaaactcatatca 19896515  T
Q  119 ttcaagtt 126  Q
    | ||||||    
T  19896516 tccaagtt 19896523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 21364943 - 21365015
Alignment:
Q  42 tttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 114  Q
    |||||| |||| || |||||||||||||||| | || |||||| | ||||||||| | |||| ||||||||||    
T  21364943 tttattcaaattgatagattacatcattcaagatcgttaaaaatggaaaggatgagtttgcgaacaaactcac 21365015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 24736198 - 24736246
Alignment:
Q  69 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 117  Q
    ||||||||| |||||| ||||||||||||| || | |||||||||||||    
T  24736198 tcaacaccgttaaaaatgtaaaggatgaatttgtgaacaaactcacagc 24736246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 26090755 - 26090803
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    |||| ||||||||||||||||||||||||||   ||||| |||||||||    
T  26090755 aacaacgctaaaaacgtaaaggatgaatctgtaaacaaattcacagcat 26090803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 35348571 - 35348527
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| |||||||||  |||||||||||    
T  35348571 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcaca 35348527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 48257485 - 48257521
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||| |||||||||| |||||||||||    
T  48257485 taaaaacgtaaagggtgaatctgcgaacaaactcaca 48257521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 9e-35; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 14906697 - 14906803
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  14906697 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaggat 14906796  T
Q  120 tcaagtt 126  Q
     ||||||    
T  14906797 ccaagtt 14906803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 29777513 - 29777423
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  29777513 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 29777423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 9619132 - 9619237
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    ||||||| |||||| |||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  9619132 acaaaaataaaattatattcattcattcaaattgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatc 9619231  T
Q  121 caagtt 126  Q
    ||||||    
T  9619232 caagtt 9619237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 4809258 - 4809179
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4809258 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 4809179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 9498389 - 9498479
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||    
T  9498389 tattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacagcatccaagtt 9498479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 11267302 - 11267212
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  11267302 tattcattcattcaaatcgagagattacatcattcgacaccgctaaaaacgtaaaggatgaaactgcgaacaaactcacagcatccaagtt 11267212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 2656163 - 2656074
Alignment:
Q  37 attcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||    
T  2656163 attcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatttgcgaacaaactcacagcatccaagtt 2656074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 11725991 - 11725884
Alignment:
Q  21 gacaaaaacaaaatt--tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||| |  |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||    
T  11725991 gacaaaaacaaaaatgatattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacatca 11725892  T
Q  119 ttcaagtt 126  Q
    | ||||||    
T  11725891 tccaagtt 11725884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 9073012 - 9072922
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||||||| ||||||    
T  9073012 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaatgaatctgtgagcaaactcacagcatccaagtt 9072922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 37565669 - 37565759
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  37565669 tattcattcatgcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatttgcgaacaaactcacagcatccaagtt 37565759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 44099710 - 44099816
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  44099710 gacaaaaacaaaatgatatttattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgctaacaaactcacaacat 44099809  T
Q  120 tcaagtt 126  Q
     ||||||    
T  44099810 ccaagtt 44099816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 11464452 - 11464375
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||    
T  11464452 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaactcacatcatccaagtt 11464375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 32724258 - 32724361
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 122  Q
    ||||| |||||| |||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||| ||    
T  32724258 aaaaataaaattatattcattcatttgaatcgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctacgaacaaactcacaacatcca 32724357  T
Q  123 agtt 126  Q
    ||||    
T  32724358 agtt 32724361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 19876492 - 19876402
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||    
T  19876492 tatttattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacatactcacagcatccaagtt 19876402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 33896380 - 33896290
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||| ||||||    
T  33896380 tatttattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaaaaaactcacaacatccaagtt 33896290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 34612098 - 34612008
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||| ||||||||||| ||| ||||||    
T  34612098 tattcattcattaaaatcgagagattacatcattgaacatcactaaaaacgtaaagaatgaatctgcgaacaaactcacaacatccaagtt 34612008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 43192150 - 43192227
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||| ||||||    
T  43192150 aaatcgagagattacatcattcaacaccgctaaaaacataaaggatgaatctgcgaacaaactcagaacatccaagtt 43192227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 43889899 - 43890004
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| |||| |||||||||||| ||||||||  ||||||||||||||||||||||||||  ||||| |||||||||     
T  43889899 acaaaaacaaaatgatattcattcatttaaattgagagattacattattcaacaatgctaaaaacgtaaaggatgaatctgcaaacaaaatcacagcatc 43889998  T
Q  121 caagtt 126  Q
    ||||||    
T  43889999 caagtt 43890004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 28240135 - 28240052
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    |||||||| ||| ||||||| || |||| |||||||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  28240135 tattcattcattcaaatcgataggttacgtcattcaacatcgctaaaaacgtaaaggatgaatctgtgaacaaactcacagcat 28240052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 23851269 - 23851363
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||  || ||||| ||| |||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||| |||||||||||    
T  23851269 acaaaaacaaaatgataatcattcattcaaatcgagagattacatcattcaacaccactaaaaaagtaaaagataaatctgcgaacaaactcaca 23851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 33342727 - 33342638
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||| | ||||||||| |||||||||||||||||  ||||| |||||||||||| ||||||||||||||||||||||    
T  33342727 tattcattcattcaaatcaatagattacattattcaacaccgctaaaat-gtaaatgatgaatctgcgaacaaactcacagcattcaagtt 33342638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 44578324 - 44578234
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||||||| |||||||||||||| |  |||||| ||| ||| ||||||    
T  44578324 tattcatttattcaaatcgagagattacatcattcaacactgttaaaaacgcaaaggatgaatctgtgatcaaacttacatcatccaagtt 44578234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 16794599 - 16794495
Alignment:
Q  22 acaaaaacaaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattc 121  Q
    |||||| |||||  |||||||| ||| ||||||| | |||||||||||||| |||| |||||  |||||||||||||||||| ||||||||||| ||| |    
T  16794599 acaaaatcaaaaaatattcattcattcaaatcgatatattacatcattcaagaccgataaaatagtaaaggatgaatctgcgaacaaactcacaacatcc 16794500  T
Q  122 aagtt 126  Q
    |||||    
T  16794499 aagtt 16794495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 17949812 - 17949736
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactc 112  Q
    |||||||| ||| |||| |||| |||| |||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  17949812 tattcattcattcaaattgagaaattatatcattcaacaccgctaaaaacgtgaagggtgaatctgcgaacaaactc 17949736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 39152932 - 39153008
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactc 112  Q
    |||||||| ||| ||||||| | | ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  39152932 tattcattcattcaaatcgataaagtacattattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaactc 39153008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 1236487 - 1236587
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 117  Q
    ||||||||||||||  |||||||| ||| ||||||| ||| |||||||   |||| |  ||||||||||||||||||||||||||| |||||||||||||    
T  1236487 gacaaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagattgctaaaaacgtaaaggatgaatctgcgaacaaactcacagc 1236586  T
Q  118 a 118  Q
    |    
T  1236587 a 1236587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 15344549 - 15344507
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  15344549 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 15344507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 15433614 - 15433572
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  15433614 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 15433572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 15524918 - 15524876
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  15524918 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 15524876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 30235892 - 30235826
Alignment:
Q  135 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    ||||| ||||||||||||||| |||||||| | |||||||||||||| || ||||||| ||||||||    
T  30235892 tccttttgggtgttgatcgcaagggtgtctttgttggtgtttgttttcggatgttccgcctatatac 30235826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 43135374 - 43135459
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||     ||||||||||||||||||||||| ||||||| |||| ||| ||||||| ||| ||||||    
T  43135374 tattcattcattcaaatcgagagatta-----ttcaacaccgctaaaaacgtaaatgatgaatttgcgaacatactcacaacatccaagtt 43135459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 24099097 - 24099154
Alignment:
Q  69 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||||| ||| ||||||    
T  24099097 tcaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacatccaagtt 24099154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 30568110 - 30568208
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattca---acaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||  |||||||| ||| |||| || ||||||||||||  |   ||| ||||||||||||||||| |||||||||| |||||||||||    
T  30568110 gacaaaaacaaaatgatattcattcattcaaattgatagattacatcatatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 30568208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 7883084 - 7883131
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  7883084 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 7883131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 27746928 - 27746971
Alignment:
Q  59 attacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 102  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  27746928 attacatcattcaataccgctaaaaacgtaaatgatgaatctgc 27746971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 33299148 - 33299069
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||| || ||| |||| || ||| |||||||||||||||| ||||||  ||||| |||||||||||| |||||||||||    
T  33299148 tattctttcatttaaattgatagaatacatcattcaacacccctaaaattgtaaatgatgaatctgcgaacaaactcaca 33299069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 41060103 - 41060150
Alignment:
Q  68 ttcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||| | |||||||||||||||||||||||||| |||||||||||    
T  41060103 ttcaacatcactaaaaacgtaaaggatgaatctgcgaacaaactcaca 41060150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 42447824 - 42447907
Alignment:
Q  43 ttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||| ||||| | |||||||||||||||| ||  |||||||||||||| |||||| || | ||||||||||| ||| ||||||    
T  42447824 ttattcaaatctaaagattacatcattcaatactactaaaaacgtaaagaatgaatatgtgaacaaactcacaacatccaagtt 42447907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 17430665 - 17430731
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 102  Q
    |||||||| |||  ||| || |||||| ||||||||||| ||||||||||||||||||| |||||||    
T  17430665 tattcattgatttgaattgatagattatatcattcaacatcgctaaaaacgtaaaggataaatctgc 17430731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 21238071 - 21237990
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| |||| || ||| ||||||||  |||||| ||||||||||||||||| |||||||| | |||||||||||    
T  21238071 tattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgtaaagggtgaatctgtgaacaaactcaca 21237990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 11197156 - 11197087
Alignment:
Q  57 agattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||||||  | |||||||||||| ||| ||||||   ||||||||||||||| ||||||    
T  11197156 agattacatcattcaacattgttaaaaacgtaaatgataaatctgtaaacaaactcacagcatccaagtt 11197087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 16928600 - 16928644
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||    
T  16928600 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 16928644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 3673687 - 3673632
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||||||||||||| |||| ||||  ||||||||||||||| ||||||    
T  3673687 aacaacgctaaaaacgtaaagggtgaaactgcaaacaaactcacagcatccaagtt 3673632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 14544738 - 14544793
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| |||||||||||||| ||||||||||||  ||||||||||| ||| ||||||    
T  14544738 aacatcgctaaaaacgtaatggatgaatctgcaaacaaactcacaccatccaagtt 14544793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 3240617 - 3240571
Alignment:
Q  80 aaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||||||||||| | ||||||||| ||| ||||||    
T  3240617 aaaaacgtaaaggatgaatctgcgaataaactcacaacatccaagtt 3240571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 14585918 - 14585876
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||    
T  14585918 cgctaaaaacgtatagggtgaatctgcgaacaaactcacagca 14585876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 17427015 - 17427081
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 102  Q
    |||||||| |||  ||| || ||||||||  |||||||| ||||||||||||||||||| |||||||    
T  17427015 tattcattcatttgaattgatagattacaatattcaacatcgctaaaaacgtaaaggataaatctgc 17427081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 31013457 - 31013495
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  31013457 gctaaaaacgtaaagggtgaatctgcgaacaaactcaca 31013495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 36568939 - 36568889
Alignment:
Q  59 attacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaa 109  Q
    |||||| |||||||||  |||||||||||||| ||||||| ||||||||||    
T  36568939 attacaacattcaacattgctaaaaacgtaaaagatgaatttgcggacaaa 36568889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 9e-35; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 7242073 - 7241983
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7242073 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 7241983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 7247248 - 7247158
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7247248 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 7247158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 27266633 - 27266739
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  ||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  27266633 gacaaaaacaaaatggtattcgttcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacagcat 27266732  T
Q  120 tcaagtt 126  Q
     ||||||    
T  27266733 ccaagtt 27266739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 16981581 - 16981491
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||    
T  16981581 tattcatttattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaactcacaacatccaagtt 16981491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 21060057 - 21060163
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| |||    
T  21060057 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacatactcacaacat 21060156  T
Q  120 tcaagtt 126  Q
     ||||||    
T  21060157 ccaagtt 21060163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 34882022 - 34881916
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| |||    
T  34882022 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggatgaatctgcaaacaaactcacaacat 34881923  T
Q  120 tcaagtt 126  Q
     ||||||    
T  34881922 ccaagtt 34881916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 42580177 - 42580087
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||    
T  42580177 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctataaacaaactcacagcattcaagtt 42580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 3271177 - 3271282
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  || ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||     
T  3271177 acaaaaacaaaatgataatcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcataacatc 3271276  T
Q  121 caagtt 126  Q
    ||||||    
T  3271277 caagtt 3271282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 41184216 - 41184320
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  ||| |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||     
T  41184216 acaaaaacaaaatgatatgcattcattcaaatcgagagattacatcatt-aacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatc 41184314  T
Q  121 caagtt 126  Q
    ||||||    
T  41184315 caagtt 41184320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 27752214 - 27752124
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||||||| ||||||    
T  27752214 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctacgaacatactcacagcatccaagtt 27752124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 30298514 - 30298408
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||||||||| ||| ||||||| |||    
T  30298514 gacaaaaacaaaatgatattcatttatttaaatcgagagactatatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacatactcacaacat 30298415  T
Q  120 tcaagtt 126  Q
     ||||||    
T  30298414 ccaagtt 30298408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 43149016 - 43148926
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||    
T  43149016 tattcattcattcaaatcgagagattatatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 43148926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 781692 - 781587
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | ||||||| |||     
T  781692 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtgaaggatgaatctgcgaatatactcacaacatc 781593  T
Q  121 caagtt 126  Q
    ||||||    
T  781592 caagtt 781587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 18677242 - 18677345
Alignment:
Q  23 caaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattc 121  Q
    ||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||| |    
T  18677242 caaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgt-aaggatgaatctgcgaacaaacacacaacatcc 18677340  T
Q  122 aagtt 126  Q
    |||||    
T  18677341 aagtt 18677345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 8771971 - 8772061
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||  ||||||||| ||||| ||||||    
T  8771971 tattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatttgcaaacaaactcatagcatccaagtt 8772061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 7150125 - 7150208
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  7150125 tattcattcattcaaatcgagagattatatcattcaacaccgctaaaaacgtaaagaacaaatctgcgaacaaactcacagcat 7150208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 30299133 - 30299043
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||| ||||||    
T  30299133 tattcattcatttaaatcgagatattaaatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacatactcagaacatccaagtt 30299043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 35475128 - 35475218
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||||||| ||| ||||||    
T  35475128 tattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatatacgaacatactcacaacatccaagtt 35475218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 19259615 - 19259692
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||||| ||||||| |||||||||||||||| || |||||||| ||||||||||||||| ||||||    
T  19259615 aaatcgagagattacatcgttcaacatcgctaaaaacgtaaagaataaatctgcgaacaaactcacagcatccaagtt 19259692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 43008090 - 43008195
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| || | ||||||||| | |||     
T  43008090 acaaaaacaaaataatattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggataaatttgagaacaaactcataacatc 43008189  T
Q  121 caagtt 126  Q
    ||||||    
T  43008190 caagtt 43008195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 10649931 - 10649864
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 103  Q
    |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  10649931 tattcattcattcaaatcgagagattacatcattcaacaccgttaaaaacgtaaatgatgaatctgcg 10649864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 7886730 - 7886819
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||| |||||||| |||||||||| | |||||||||||| || ||||||    
T  7886730 tattcattcattcaaat-gagagattacatcattcaacaccgctaagaacgtaaaagatgaatctgtgaacaaactcacagtatccaagtt 7886819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 15571196 - 15571106
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||| | |||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||| ||| ||||||    
T  15571196 tattcattcattcaaatccatagattacatcattcaacaccactaaaaacataatggatgaatctgcgaacaaactcacaacatccaagtt 15571106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 20257486 - 20257576
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||| |||||| ||||||||||| ||||||||||||||| |||||||||| | ||||||||||| ||| ||||||    
T  20257486 tattcattaattcaaatcgatagattatatcattcaacatcgctaaaaacgtaaatgatgaatctgtgaacaaactcacatcatccaagtt 20257576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 30371926 - 30371844
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 102  Q
    ||||||||||||||  |||||||| ||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  30371926 gacaaaaacaaaatgatattcattcattcaaatagagagattacatcattaaacaccgctaaaaacgtaagggatgaatctgc 30371844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 11768288 - 11768200
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaag 124  Q
    |||||||| ||||||||||| |  |||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||| ||| ||||    
T  11768288 tattcattcattaaaatcgatatgttacattattcaacatcgctaaaaacgtataggatgaatctgcgaacaaactcacatcatccaag 11768200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 4954281 - 4954202
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||| ||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| || | |||||||||||    
T  4954281 tatttattcattcaaatcgagagattacatcgttcaacaccgctaaaaatgtaaaggatgaatatgtgaacaaactcaca 4954202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 7612875 - 7612935
Alignment:
Q  63 catcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaa 123  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||||    
T  7612875 catcattcaacaccgctaaaaacgtaaaagatgaatttgcgaacaaactcacaacattcaa 7612935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 19280727 - 19280785
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggat 94  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  19280727 tattcattcattcaaatcgagagattacattattcaacaccgctaaaaacataaaggat 19280785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 2057648 - 2057696
Alignment:
Q  55 agagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 103  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  2057648 agagaatacatcattcaacaccgctaaaaacgtaaaggatgaatgtgcg 2057696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 37483323 - 37483274
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaat 98  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  37483323 aaatcgatagattacatcattcaacatcgctaaaaacataaaggatgaat 37483274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 11976780 - 11976835
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||| ||| ||||||    
T  11976780 aacatcgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 11976835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 13422176 - 13422121
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||| ||| ||||||    
T  13422176 aacatcgctaaaaacgtaaaggatgaatatgcgaacaaactcacaacatccaagtt 13422121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 26877962 - 26878009
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  26877962 taaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 26878009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 10332390 - 10332436
Alignment:
Q  69 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||| |||||||||||||||||||||||||| | |||||||||||    
T  10332390 tcaacatcgctaaaaacgtaaaggatgaatctgtgaacaaactcaca 10332436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 14726268 - 14726361
Alignment:
Q  36 tattcatttattaaaatcgagagattacatca--ttcaa-caccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||| |||||||||||  | ||| || | ||||||||||||||| |||||||| | ||||||||||||||| ||||||    
T  14726268 tattcattcattcaaatcgatagattacatcagatacaaacatcactaaaaacgtaaagggtgaatctgtgaacaaactcacagcatccaagtt 14726361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 28235891 - 28235786
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaaca---ccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    |||||||||||  |||||||| ||  |||| |||||||| ||||||||||||   |||||||||  ||||| |||||||||||| ||||||||||| |||    
T  28235891 aaaaacaaaatgatattcattcatataaattgagagattgcatcattcaacaataccgctaaaat-gtaaatgatgaatctgcgaacaaactcacaacat 28235793  T
Q  120 tcaagtt 126  Q
     ||||||    
T  28235792 ccaagtt 28235786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 31721982 - 31722042
Alignment:
Q  141 tgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    |||||||||||| || ||||| || | || ||||||||||| |||||||||||||||||||    
T  31721982 tgggtgttgatcacatgggtgcctttgttagtgtttgttttcgggtgttccgtctatatac 31722042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 34945636 - 34945592
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||    
T  34945636 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 34945592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 37985965 - 37986013
Alignment:
Q  78 ctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||| |||||||||||  ||||||||||| ||||||||||    
T  37985965 ctaaaaacgtaaaagatgaatctgcaaacaaactcacatcattcaagtt 37986013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 13007472 - 13007425
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| ||||||||||||||||| |||||||||  ||||||||||||||    
T  13007472 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacagca 13007425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 22978714 - 22978781
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 103  Q
    |||||||| |||  |||||| | | ||||||||||||||| ||||| |||||||||||||||| ||||    
T  22978714 tattcattcattctaatcgataaagtacatcattcaacactgctaataacgtaaaggatgaatttgcg 22978781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 24229629 - 24229676
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| ||||||||||||||||  |||||||||| ||||||||||||||    
T  24229629 aacatcgctaaaaacgtaaagagtgaatctgcgaacaaactcacagca 24229676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 9113570 - 9113612
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactca 113  Q
    |||| ||||||||||||||||| |||||||||| |||||||||    
T  9113570 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactca 9113612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 19103317 - 19103359
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  19103317 cgctaaaaacgtataggatgaatctgcgaacaaactcatagca 19103359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 28540756 - 28540798
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||    
T  28540756 cgctaaaaacgtatagggtgaatctgcgaacaaactcacagca 28540798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 31742469 - 31742535
Alignment:
Q  135 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    ||||||||||| ||||||||| ||| |||| |   |||||||||||| |||||||||| ||||||||    
T  31742469 tccttatgggttttgatcgcaagggagtctttgcaggtgtttgttttcgggtgttccgcctatatac 31742535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 24436133 - 24436198
Alignment:
Q  135 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatata 200  Q
    |||||||| |||||||||| ||| |||||| | || ||||||||||| || ||||||| |||||||    
T  24436133 tccttatgagtgttgatcgtaggagtgtctttgttagtgtttgttttcggatgttccgactatata 24436198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 26825667 - 26825626
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  26825667 gctaaaaacgtaaagggtgaatctacgaacaaactcacagca 26825626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 6011991 - 6012027
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||| |||||||||| |||||||||||    
T  6011991 taaaaacgtaaagggtgaatctgcgaacaaactcaca 6012027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 6217134 - 6217087
Alignment:
Q  78 ctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||| ||||| |||||||||| |||||||||||||| |||||||    
T  6217134 ctaaaaacgcaaagg-tgaatctgcgaacaaactcacagcactcaagtt 6217087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 25980400 - 25980356
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| |||||||||  |||||||||||    
T  25980400 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcaca 25980356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 38598040 - 38597996
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| ||||| |||| |||||||||||    
T  38598040 aacatcgctaaaaacgtaaagggtgaatttgcgaacaaactcaca 38597996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 9e-35; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 3848709 - 3848799
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  3848709 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 3848799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 25162736 - 25162630
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||    
T  25162736 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatccgcgaacaaactcacaacat 25162637  T
Q  120 tcaagtt 126  Q
     ||||||    
T  25162636 ccaagtt 25162630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 32607768 - 32607674
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32607768 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 32607674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 36906406 - 36906316
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  36906406 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagtt 36906316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 2342748 - 2342642
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||| || |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  2342748 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcgtttaacaccgctaaagacgtaaaggatgaatctgcgaacaaactcacagcat 2342649  T
Q  120 tcaagtt 126  Q
     ||||||    
T  2342648 ccaagtt 2342642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 25631316 - 25631406
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||    
T  25631316 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacatcatccaagtt 25631406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 38440381 - 38440471
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  38440381 tattcattcattcaaatcgaaagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgagcaaactcacagcatccaagtt 38440471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 30648509 - 30648599
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||    
T  30648509 tattcattcattcaaatcgagagattacataattcaacaccgctaaaaacataaaggatgaatctgcgaacaaactcacaacatccaagtt 30648599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 44907174 - 44907268
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||  |||||||| ||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  44907174 acaaaaacaaaatgatattcattcattcaaatcgagatattacatcattcaacaacgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 44907268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 50611193 - 50611282
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaac 110  Q
    |||||||||||||  |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50611193 acaaaaacaaaatgatattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaac 50611282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 12116382 - 12116292
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||  | ||||||||||| ||| ||||||    
T  12116382 tattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctaagaacaaactcacaacatccaagtt 12116292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 17238105 - 17237999
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| |||    
T  17238105 gacaaaaacaaaatgatattcattcattcaaattgagatattacatcattcaacaccgctaaaaacgtaaaggaagaatcagcgaacaaactcacatcat 17238006  T
Q  120 tcaagtt 126  Q
     ||||||    
T  17238005 ccaagtt 17237999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 21916757 - 21916667
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||| ||||||    
T  21916757 tattcatttatccaaatcgagatattacatcattcaacaccgctaaaaatgtaaaggatgaatctgagaacaaactcacatcatccaagtt 21916667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 46934923 - 46934833
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||| ||||||    
T  46934923 tattcattcattcaaatcgagagattgcatcattcaacatcgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatccaagtt 46934833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 51202038 - 51202144
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||| ||| ||| ||||||||||||||||| ||| | |||||||||||||||||| |||||||||||| |||||||||||||||    
T  51202038 gacaaaaacaaaatgatatttattcattcaaatcgagagattacattatttatcaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacagcat 51202137  T
Q  120 tcaagtt 126  Q
     ||||||    
T  51202138 ccaagtt 51202144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 4178865 - 4178785
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatct 100  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4178865 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacactgctaaaaacgtaaaggatgaatct 4178785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 35498990 - 35499057
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 103  Q
    |||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35498990 tattcattcattcaaatcgagggattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 35499057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 49552037 - 49552104
Alignment:
Q  59 attacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  49552037 attacatcattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaacttacagcatccaagtt 49552104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 22803314 - 22803224
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||| || ||||||||||||||| ||||||||||||||||||| ||| || | ||||||||||||||| ||||||    
T  22803314 tattcattcatttaaatcgataggttacatcattcaacatcgctaaaaacgtaaaggataaatttgtgaacaaactcacagcatccaagtt 22803224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 29503760 - 29503655
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| ||||| | ||||||||| |||||||||||||||||| ||||||||||||| |||| ||| |||||||| ||     
T  29503760 acaaaaacaaaatgatattcattcattcaaatcaatagattacattattcaacaccgctaaaaatgtaaaggatgaatatgcgaacatactcacagaatc 29503661  T
Q  121 caagtt 126  Q
    ||||||    
T  29503660 caagtt 29503655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 37169492 - 37169423
Alignment:
Q  57 agattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| | ||||||||    
T  37169492 agattacatcattcaacaccgctaaaaacgtaaaggatgaatccgcgaagaaactcacaaccttcaagtt 37169423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 38854813 - 38854916
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||| |||||||   |||||||||||||||||||||||| |||| | ||||||||| |||    
T  38854813 gacaaaaacaaaatgatattcattcattcaaatcgagagattacgtcattca---ccgctaaaaacgtaaaggatgaatatgcgaaaaaactcacatcat 38854909  T
Q  120 tcaagtt 126  Q
     ||||||    
T  38854910 ccaagtt 38854916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 39917189 - 39917278
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||| || |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| | | ||||||||| ||| ||||||    
T  39917189 tattctttcattaaaattgagagatta-atcattcaacacctctaaaaacgtaaaggatgaatctgtgaataaactcacaacatccaagtt 39917278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 53807650 - 53807747
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||  |||||||| ||||||||| | ||| |||||||   |||| | |||||||||||||||||||||||||||| |||||||||||    
T  53807650 gacaaaaacaaaatgatattcattcattaaaatcaatagaatacatcagaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 53807747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 35175684 - 35175592
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||| || ||| ||||||||  |||||| ||||||||||||||| |||||||||||| ||||||||||| || |||||||    
T  35175684 tattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgtaaaagatgaatctgcgaacaaactcacaacactcaagtt 35175592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 50194178 - 50194235
Alignment:
Q  69 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  50194178 tcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 50194235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 46178850 - 46178762
Alignment:
Q  38 ttcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| ||| ||||||| | |||| |||||||||||||| |||||||||||| ||| || ||||| ||||||||||| ||| ||||||    
T  46178850 ttcattcattcaaatcgatatattatatcattcaacaccgttaaaaacgtaaaagataaaactgcgaacaaactcacatcatccaagtt 46178762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 628715 - 628812
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||  |||||||| ||| |||| || ||| |||||||   |||| | |||||||||||||||||||||||||||| |||||||||||    
T  628715 gacaaaaacaaaatgatattcattcattcaaattgatagaatacatcaaaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 628812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 46979774 - 46979880
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||| | | |||||| |||||||| || ||| ||||| |||||||| | ||||||||||||||||| |||||||  ||||||||| | |||    
T  46979774 gacaaaaacaaaactattttcattcattaaaattgatagagtacattattcaacagcactaaaaacgtaaaggattaatctgcaaacaaactcataacat 46979873  T
Q  120 tcaagtt 126  Q
     ||||||    
T  46979874 ccaagtt 46979880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 14464765 - 14464704
Alignment:
Q  65 tcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||||||| | ||| ||||||    
T  14464765 tcattcaacaccgttaaaaacgtaacggatgaatctgcgaacaaactcagaacatccaagtt 14464704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 44959767 - 44959873
Alignment:
Q  22 acaaaaacaaaatttattcatttattaaaatcgagagattacatca--ttcaa-caccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||| ||||||| ||| ||||||| ||| |||||||  | ||| || ||||||||||||||||| |||||||||  | ||||||||||||    
T  44959767 acaaaaacaaaatt-attcattcattcaaatcgatagaatacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcaaataaactcacagca 44959865  T
Q  119 ttcaagtt 126  Q
    | ||||||    
T  44959866 tccaagtt 44959873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 7966837 - 7966774
Alignment:
Q  138 ttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    |||||||||| |||||||  ||||||| | || ||||||||||| |||||||||||||||||||    
T  7966837 ttatgggtgtggatcgcaaaggtgtctttgtttgtgtttgttttcgggtgttccgtctatatac 7966774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 52922962 - 52923009
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  52922962 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 52923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 21488377 - 21488287
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||| ||||| | ||| || |||||| |||| | |||||||  | ||||||||||||||| | |||||||||| |||||||||    
T  21488377 tattcatttattcaaatcaatagagtatatcatttaacatcactaaaaattttaaggatgaatctgcgaataaactcacagtattcaagtt 21488287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 27856403 - 27856353
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||| ||||||    
T  27856403 cgctaaaaacgtaaaagatgaatctgcgaacaaactcacatcatccaagtt 27856353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 31794351 - 31794274
Alignment:
Q  37 attcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 114  Q
    ||||||| ||| ||||||| ||| ||||| |||||| | |||||||||||||||| ||||| ||||| | ||||||||    
T  31794351 attcattcatttaaatcgatagaatacattattcaatatcgctaaaaacgtaaagaatgaacctgcgaataaactcac 31794274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 46304371 - 46304420
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||| |||||||||| ||||||||||| || |||||||    
T  46304371 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacactcaagtt 46304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 6954541 - 6954588
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| ||||||||||||||||| |||||||||  ||||||||||||||    
T  6954541 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacagca 6954588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 21313279 - 21313232
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||| ||||||| ||||||| || ||||||||||||||    
T  21313279 aacaccgctaaaaatgtaaagggtgaatctccgaacaaactcacagca 21313232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 33753637 - 33753703
Alignment:
Q  135 tccttatgggtgttgatcgcaggggtgtctcttttggtg-tttgtttttgggtgttccgtctatatac 201  Q
    ||||| ||||||||||||||| |||||||||| |||||| ||| ||||| ||||||| ||||||||||    
T  33753637 tccttttgggtgttgatcgca-gggtgtctctattggtgttttatttttaggtgttctgtctatatac 33753703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 36461282 - 36461337
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||||| ||||||| |||||||||  |||||||||||||| |||||||    
T  36461282 aacatcgctaaaaatgtaaagggtgaatctgctaacaaactcacagcactcaagtt 36461337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 48200027 - 48199980
Alignment:
Q  68 ttcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||| ||||||||||||||||| ||||| |||| |||||||||||    
T  48200027 ttcaacatcgctaaaaacgtaaagggtgaatttgcgaacaaactcaca 48199980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 21289664 - 21289706
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||    
T  21289664 cgctaaaaacgtatagggtgaatctgcgaacaaactcacagca 21289706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 24396306 - 24396396
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||| || ||| |||||||||||| |  ||||||||| |||| ||||||| || | |||||| |||| ||||||||||    
T  24396306 tattcattaattcaaattgatagagtacatcattcaatattgctaaaaacttaaatgatgaatttgtgtacaaacacacaacattcaagtt 24396396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 38142763 - 38142713
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||| ||||||| ||||| |||  ||||||||||||||||||||||    
T  38142763 cgctaaaaatgtaaagggtgaatatgcaaacaaactcacagcattcaagtt 38142713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 51487320 - 51487270
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||||| |||||||||| ||||| ||||| || |||||||    
T  51487320 cgctaaaaacgtaaagggtgaatctgcgaacaaattcacaacactcaagtt 51487270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 6910227 - 6910320
Alignment:
Q  22 acaaaaacaaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||  | |||||| ||| ||||| | ||| || ||  ||||||||||||| ||||||||||||| ||| || | |||||||||||    
T  6910227 acaaaaacaaaaaatgttcattcattcaaatcaatagagtatattgttcaacaccgctataaacgtaaaggataaatttgtgaacaaactcaca 6910320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 9998704 - 9998663
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  9998704 gctaaaaacgtaaagggtgaatctacgaacaaactcacagca 9998663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 10108473 - 10108432
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  10108473 gctaaaaacgtaaagggtgaatctacgaacaaactcacagca 10108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 10229713 - 10229672
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  10229713 gctaaaaacgtaaagggtgaatctacgaacaaactcacagca 10229672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 43488445 - 43488482
Alignment:
Q  81 aaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  43488445 aaaacgtaaatgatgaatctgcgaacaaactcacagca 43488482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 40556945 - 40556901
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| |||||||||| |||||| |||||||||| |||||||||||    
T  40556945 aacatcgctaaaaacataaagggtgaatctgcgaacaaactcaca 40556901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 45568290 - 45568334
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| |||||||||| | |||||||||    
T  45568290 aacatcgctaaaaacgtaaagggtgaatctgcgaataaactcaca 45568334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 2e-32; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 433481 - 433571
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  433481 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 433571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 26492668 - 26492562
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  26492668 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgtgaacaaactcacagcat 26492569  T
Q  120 tcaagtt 126  Q
     ||||||    
T  26492568 ccaagtt 26492562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 46822318 - 46822212
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||| ||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  46822318 gacaaaaacaaaatgatattaattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatctgcgaacaaactcacagcat 46822219  T
Q  120 tcaagtt 126  Q
     ||||||    
T  46822218 ccaagtt 46822212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 34774013 - 34773908
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||     
T  34774013 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctgcaaacaaactcacagcatc 34773914  T
Q  121 caagtt 126  Q
    ||||||    
T  34773913 caagtt 34773908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 45198808 - 45198913
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||     
T  45198808 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacatactcacaacatc 45198907  T
Q  121 caagtt 126  Q
    ||||||    
T  45198908 caagtt 45198913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 23085824 - 23085728
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 116  Q
    |||||||| |||||| |||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23085824 gacaaaaataaaattatattgattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacag 23085728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 7640565 - 7640655
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||    
T  7640565 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatccaagtt 7640655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 32684970 - 32684865
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||     
T  32684970 acaaaaacaaaatgatattcattcattcaaatcgagagactacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaacttacagcatc 32684871  T
Q  121 caagtt 126  Q
    ||||||    
T  32684870 caagtt 32684865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 22927660 - 22927742
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  22927660 tattcattaattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatttgcgaacaaactcacagca 22927742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 35495950 - 35496055
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||     
T  35495950 acaaaaacaaaatgatattcaatcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaagggatgaatctacgaacaaactcacatcatc 35496049  T
Q  121 caagtt 126  Q
    ||||||    
T  35496050 caagtt 35496055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 1485046 - 1485118
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaa 108  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1485046 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaa 1485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 2843031 - 2843114
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||    
T  2843031 tattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatatgtgaacaaactcacagcat 2843114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 20116868 - 20116778
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||| ||| ||||||    
T  20116868 tattcattcattcaaatcgagagattacatcattccacaccgctaaaaacgtaaatgatgaatctgtgaacaaactcacaacatccaagtt 20116778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 42066836 - 42066942
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||| ||||||| |||    
T  42066836 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaataaatatgcgaacatactcacaacat 42066935  T
Q  120 tcaagtt 126  Q
     ||||||    
T  42066936 ccaagtt 42066942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 21266695 - 21266587
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagaga--ttacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 117  Q
    ||||||||||||||  |||||||| ||| |||||||||||  ||||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  21266695 gacaaaaacaaaatgatattcattcattcaaatcgagagagattacaccattcaacaccgctaaaaacgtaaatgatgaatctgtgaacaaactcacagc 21266596  T
Q  118 attcaagtt 126  Q
    || ||||||    
T  21266595 atccaagtt 21266587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 23786868 - 23786779
Alignment:
Q  30 aaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||| |||||||| ||| || | |||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  23786868 aaaatatattcattcattcaattagagagattacatcattcaacacagctaaaaacgtaaatgatgaatctgcgaacaaactcacagcat 23786779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 26583997 - 26583910
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaa 123  Q
    |||||||| ||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||||| | || ||||||||||||||    
T  26583997 tattcattcattcaaatcgtgagattacatcattcaacatcgttaaaaacgtaaaggatgaatctgcgaataagctcacagcattcaa 26583910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 14627672 - 14627777
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||| |||| ||||| |||||||||    
T  14627672 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcatttgacaccgct-aaaacgtaaaggatgaatatgcgaacaaaatcacagcat 14627770  T
Q  120 tcaagtt 126  Q
     ||||||    
T  14627771 ccaagtt 14627777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 42311578 - 42311488
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactca 113  Q
    |||||||||||  |||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||| |||| |||||||||    
T  42311578 aaaaacaaaatgatattcatttattcaaatcgagagattacattattcaacactgctagaaacgtaaaggatgaatttgcgaacaaactca 42311488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 1448606 - 1448696
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaac 110  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||| |||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  1448606 gacaaaaacaaaatgatattcattcattcaaatcgagatattatatcattcaacaccgctgaaaacctaaaggatgaatctgcgaacaaac 1448696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 31235574 - 31235664
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||| ||||||| || ||||||||||||| | |||||||||||||||| |||||| || | ||||||||||||||| ||||||    
T  31235574 tattcatttattcaaatcgataggttacatcattcaatatcgctaaaaacgtaaagaatgaatttgtgaacaaactcacagcatccaagtt 31235664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 46339341 - 46339251
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||| || ||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||| | ||||||||||| ||| ||||||    
T  46339341 tattctttcattcaaatcaagagattacatcattcaacactgttaaaaacgtaaaggatgaatctgtgaacaaactcacatcatccaagtt 46339251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 13592304 - 13592382
Alignment:
Q  40 catttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    |||| ||||||||||| ||| ||||| ||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  13592304 cattcattaaaatcgatagagtacat-attcaacactgctaaaaatgtaaaggatgaatctgcgaacaaactcacagcat 13592382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 6559180 - 6559074
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||| ||||||||| ||||||||||||  ||||||||||||| ||||||| || | ||||||||| |||||    
T  6559180 gacaaaaacaaaatgatattcattcatttaaattgagagattatatcattcaacactactaaaaacgtaaatgatgaatatgtgaacaaactcatagcat 6559081  T
Q  120 tcaagtt 126  Q
     ||||||    
T  6559080 ccaagtt 6559074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 32521719 - 32521809
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||  |||||||||||||||||||| ||||| |||||||||||||| || | ||||||||||| ||| ||||||    
T  32521719 tattcattcattcaaatcgatggattacatcattcaacaccgttaaaatcgtaaaggatgaatttgtgaacaaactcacaacatccaagtt 32521809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 48208208 - 48208154
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 103  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48208208 aaattgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 48208154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 35261584 - 35261505
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| |||| || ||| ||||||||| |||||| |||||||| ||||||||||||||||| |||||||||||    
T  35261584 tattcattcattcaaattgatagagtacatcatttaacaccactaaaaacataaaggatgaatctgcgaacaaactcaca 35261505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 17611678 - 17611588
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||| || ||| ||||||||||||||  ||||||||| ||| ||||||||||||| ||||||||||| ||| ||||||    
T  17611678 tattcattcattcaaattgatagagtacatcattcaacattgctaaaaacataagggatgaatctgcgaacaaactcacaacatccaagtt 17611588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 23425147 - 23425253
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||  ||||||||||| |||||||| ||||||||||||||| |||||||||  | ||| ||| |||||||    
T  23425147 gacaaaaacaaaatgatattcattcattcaaattaagagattacattattcaacatcgctaaaaacgtaaatgatgaatctatgaacatactaacagcat 23425246  T
Q  120 tcaagtt 126  Q
     ||||||    
T  23425247 ccaagtt 23425253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 24351239 - 24351182
Alignment:
Q  69 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  24351239 tcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcatagcatccaagtt 24351182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 19404602 - 19404657
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||| ||||||    
T  19404602 aacatcgctaaaaatgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 19404657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 35667009 - 35667100
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 114  Q
    |||||||||||  |||||||| ||| ||||| ||||| || | ||||||||||||||||||||||||| ||||||| || | ||||||||||    
T  35667009 aaaaacaaaatgatattcattcattcaaatcaagagaatataccattcaacaccgctaaaaacgtaaatgatgaatttgtgaacaaactcac 35667100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 42408593 - 42408534
Alignment:
Q  67 attcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| || |||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  42408593 attcaatacggctaaaaacgtaaaagatgaatctgcgaacaaactcacagcatccaagtt 42408534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 17222818 - 17222880
Alignment:
Q  64 atcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| ||||||||||||||  ||||||||||||||||| ||||||||||| ||| ||||||    
T  17222818 atcatttaacaccgctaaaaatataaaggatgaatctgcgaacaaactcacaacatccaagtt 17222880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 37849126 - 37849036
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||| | ||||| |  ||||||||||||||||| |||||| || |||||||  ||||||||||||||| ||||||    
T  37849126 tattcattcattcaaatcgataaattacttatttcaacaccgctaaaaatgtaaagaataaatctgcaaacaaactcacagcatccaagtt 37849036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 8001391 - 8001438
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  8001391 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 8001438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 34899452 - 34899507
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||| ||| ||||||    
T  34899452 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacatccaagtt 34899507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 6002314 - 6002224
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||| || |||||| |||||||| || |||||||||||| ||| |||||| | | ||||||||| ||| ||||||    
T  6002314 tattcattcattcaaatcgataggttacattattcaacatcgttaaaaacgtaaatgataaatctgtgaataaactcacatcatccaagtt 6002224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 37837250 - 37837350
Alignment:
Q  21 gacaaaaacaaaatttattcatttattaaaatcgagagattacatca--ttcaa-caccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 117  Q
    ||||||||||||   |||||||| ||| ||||||| ||| |||||||  | ||| || ||||||||||||||||| ||||| |||| |||||||||||||    
T  37837250 gacaaaaacaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatatgcgaacaaactcacagc 37837349  T
Q  118 a 118  Q
    |    
T  37837350 a 37837350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 40993403 - 40993359
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||    
T  40993403 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 40993359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 28407763 - 28407818
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| |||||||||| |||||| | |||||||| ||||||||||||||| ||||||    
T  28407763 aacatcgctaaaaacataaagggtaaatctgcgaacaaactcacagcatccaagtt 28407818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 39707671 - 39707628
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  39707671 cgctaaaaatgaaaaggatgaatctgcgaacaaactcacagcat 39707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 48316657 - 48316704
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| |||||||||| |||||| |||||||||| ||||||||||||||    
T  48316657 aacatcgctaaaaacctaaagggtgaatctgcgaacaaactcacagca 48316704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 20083640 - 20083550
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaact 111  Q
    |||||||||||||  |||| ||| ||| ||||||| | | ||||||||| |||| ||||| ||| ||||| |||||||||||| |||||||    
T  20083640 acaaaaacaaaatgatatttattcattcaaatcgatatagtacatcatttaacatcgctacaaatgtaaatgatgaatctgcgaacaaact 20083550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 43369564 - 43369622
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggat 94  Q
    |||||||| ||| |||| || |||||||||||||||| | |||| ||||||||||||||    
T  43369564 tattcattcatttaaattgatagattacatcattcaatatcgctgaaaacgtaaaggat 43369622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 28476466 - 28476417
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||| | |||||||||  |||||||||||||| |||||||    
T  28476466 gctaaaaacgtaaatggtgaatctgcaaacaaactcacagcactcaagtt 28476417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 36144006 - 36143965
Alignment:
Q  61 tacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 102  Q
    ||||||||||||||||||||||||| ||||  ||||||||||    
T  36144006 tacatcattcaacaccgctaaaaacataaataatgaatctgc 36143965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 46818194 - 46818243
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaac 85  Q
    |||||||  ||| ||||||| ||||||||||||||||||||| |||||||    
T  46818194 tattcataaattcaaatcgatagattacatcattcaacaccgttaaaaac 46818243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 48208147 - 48208098
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||||||||||||||| | | ||||||| ||| ||||||    
T  48208147 gctaaaaacgtaaaggatgaatctgcgaaaatactcacaacatccaagtt 48208098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 26610622 - 26610670
Alignment:
Q  68 ttcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 116  Q
    ||||||| || |||||||||||| | |||||||||| ||||||||||||    
T  26610622 ttcaacatcgttaaaaacgtaaaaggtgaatctgcgaacaaactcacag 26610670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 26623634 - 26623678
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| |||| |||||||||||| |||||||||| |||||||||||    
T  26623634 aacatcgcttaaaacgtaaagggtgaatctgcgaacaaactcaca 26623678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 38485873 - 38485933
Alignment:
Q  137 cttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctat 197  Q
    |||||||||||||||||||| | | | | | |||||||||||||| |||||||||| ||||    
T  38485873 cttatgggtgttgatcgcagagttttttttgttggtgtttgttttcgggtgttccgcctat 38485933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 42978856 - 42978812
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||||||||||||||||| |||||||||| || ||||||||    
T  42978856 aacatcgctaaaaacgtaaagggtgaatctgcgaacgaactcaca 42978812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 46918784 - 46918744
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    |||||||  |||||||||||||||| |||||||||||||||    
T  46918784 taaaaacaaaaaggatgaatctgcgaacaaactcacagcat 46918744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 2e-32; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 7343013 - 7342923
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7343013 tattcattcattcaaatcgagagattacatcactcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 7342923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 9686979 - 9687085
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  9686979 gacaaaaacaaaatgatattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcat 9687078  T
Q  120 tcaagtt 126  Q
     ||||||    
T  9687079 ccaagtt 9687085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 51868435 - 51868525
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  51868435 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatttgcgaacaaactcacagcatccaagtt 51868525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 30879382 - 30879287
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  30879382 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaactcaca 30879287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 9172781 - 9172691
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  9172781 tattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagtt 9172691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 9180763 - 9180673
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  9180763 tattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagtt 9180673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 11454228 - 11454138
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  11454228 tatttattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 11454138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 19715685 - 19715775
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  19715685 tattcattcatttaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaataaactcacagcatccaagtt 19715775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 19723604 - 19723514
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  19723604 tattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatctgcgaataaactcacagcatccaagtt 19723514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 25406074 - 25406164
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  25406074 tattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacagcatccaagtt 25406164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 45805619 - 45805709
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  45805619 tattcattcattcaaatcgagagattacatcattcaacaccgttaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagtt 45805709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 50165889 - 50165979
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||    
T  50165889 tattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacatccaagtt 50165979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 51872154 - 51872064
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  51872154 tattcattcattcaaattgagagattacatccttcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 51872064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 11709497 - 11709576
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  11709497 tattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatctgcgaacaaactcaca 11709576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 5324333 - 5324438
Alignment:
Q  21 gacaaaaacaaaat-ttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || |||||||| |||    
T  5324333 gacaaaaacaaaatgttattcattcatttaaatcgagagattacatcattcaacatcgctaaaaacgtaaagcatgaatctgcgaac-aactcacaacat 5324431  T
Q  120 tcaagtt 126  Q
     ||||||    
T  5324432 ccaagtt 5324438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 20266609 - 20266503
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||| |||    
T  20266609 gacaaaaacaaaatgatattcattcattcaaatcgagagattacattattcaacaccactaaaaacgtaaaggatgaatctgcgaataaactcacaacat 20266510  T
Q  120 tcaagtt 126  Q
     ||||||    
T  20266509 ccaagtt 20266503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 31837141 - 31837035
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |||||||||||| ||    
T  31837141 gacaaaaacaaaatgatattcattcatttaaatcgagagattatatcattcaacaccgctaaaaatgtaaaggataaatctgcgaacaaactcacagtat 31837042  T
Q  120 tcaagtt 126  Q
     ||||||    
T  31837041 ccaagtt 31837035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 5701537 - 5701460
Alignment:
Q  49 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  5701537 aaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 5701460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 35584398 - 35584502
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||||||||     
T  35584398 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaataccgct-aaaacgtaaaggatgaatttgcgaacaaactcacagcatc 35584496  T
Q  121 caagtt 126  Q
    ||||||    
T  35584497 caagtt 35584502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 45425841 - 45425946
Alignment:
Q  21 gacaaaaacaaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||| |||||||| ||| |||| |||||||||||||||| || | ||||||||||||||| |||||||||||| | |||||||||||||     
T  45425841 gacaaaaacaaaatatattcattcattcaaattgagagattacatcatttaatatcgctaaaaacgtaaatgatgaatctgcgaataaactcacagcatc 45425940  T
Q  121 caagtt 126  Q
    ||||||    
T  45425941 caagtt 45425946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 39987709 - 39987622
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaag 124  Q
    |||||||| ||| |||| || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39987709 tattcattcattcaaattgataaattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc-gacaaactcacagcattcaag 39987622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 33291208 - 33291298
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||  |||||||||||| |||||||||||  ||||||||||||||| ||||||    
T  33291208 tattcattcatttaaatcgagagattacatcattcaacaccaataaaaacgtaaatgatgaatctgctaacaaactcacagcatccaagtt 33291298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 34519435 - 34519329
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||||||| ||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||||| ||    
T  34519435 gacaaaaacaaaatgatattcattcattcaaatcgagggattacatcatccattaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaggat 34519336  T
Q  120 tcaagtt 126  Q
     ||||||    
T  34519335 ccaagtt 34519329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 48217744 - 48217638
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||| ||||| |||||||| ||||||||||||| |||| ||||||||||| |||    
T  48217744 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcatttaacactgctaaaaatgtaaaggatgaatttgcgaacaaactcacaacat 48217645  T
Q  120 tcaagtt 126  Q
     ||||||    
T  48217644 ccaagtt 48217638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 9919671 - 9919589
Alignment:
Q  43 ttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||    
T  9919671 ttattcaaatcgagagattacatcattcaa-accgctaaaaatgtaaaggataaatctgcgaacaaactcacagcatccaagtt 9919589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 32676925 - 32677015
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||| ||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||| ||||||    
T  32676925 tatttattcattcaaatcaagagattacatcattcaacaccactaaaaacgtaaaagatgaatctgcgaacaaactcacatcatccaagtt 32677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 40880814 - 40880893
Alignment:
Q  47 taaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||| ||||||||||| ||| ||||||    
T  40880814 taaaatcgagagattatattattcaacaccgctaaaaacgtaaatgatgcatctgcgaacaaactcacaacatccaagtt 40880893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 50271930 - 50272009
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||| ||| ||| ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  50271930 tatttattcattcaaatcgagatattacatcattcaacaccgctaaaaaggtaacggatgaatctgcgaacaaactcaca 50272009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 28035410 - 28035351
Alignment:
Q  54 gagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  28035410 gagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc--acaaactcaca 28035351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 31130383 - 31130473
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||| || ||||||||||||||| ||||||||| ||||||||||||| || | ||||||||||||||| ||||||    
T  31130383 tattcattcattcaaatcgacaggttacatcattcaacatcgctaaaaatgtaaaggatgaatatgtgaacaaactcacagcatccaagtt 31130473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 38520309 - 38520415
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||| |||| |||||||||||||||| | ||||||||||||||||||||| || | ||||||||||| |||    
T  38520309 gacaaaaacaaaatcatattcattcatttaaattgagaaattacatcattcaacatcactaaaaacgtaaaggatgaatttgtgaacaaactcacaacat 38520408  T
Q  120 tcaagtt 126  Q
     ||||||    
T  38520409 ccaagtt 38520415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 50148661 - 50148571
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||| || ||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |  |||||||| ||| ||||||    
T  50148661 tattctttcattcaaatcgagagattacatcattcaacatcgctaaaaatgtaaaggatgaatctgcgaaacaactcacaacatccaagtt 50148571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 27914881 - 27914977
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| ||||| ||| |||||||||||||||||||||||||| |||||||||||||   || |||||||||||||||    
T  27914881 gacaaaaacaaaatgatattcattcattcaaatcaagatattacatcattcaacaccgctaaaaatgtaaaggatgaat---cgaacaaactcacagcat 27914977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 3871698 - 3871609
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||||||||| |||||||| ||||  || ||||||||||| ||| ||||||    
T  3871698 tattcattcattcaaatcgagagattacatcattaaacaccgctaaaaacataaaggat-aatcaacgaacaaactcacaacatccaagtt 3871609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 40646964 - 40646893
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaa 109  Q
    |||||||| ||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||    
T  40646964 tattcattcattcaaatcgagagattaa--cattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaa 40646893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 7998049 - 7997990
Alignment:
Q  67 attcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||    
T  7998049 attcaacaccgctaaaaacgtaaaggatgaatctgcaaacaaactcacatcatccaagtt 7997990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 30818154 - 30818217
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatc 99  Q
    |||||||| ||| ||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  30818154 tattcattaattcaaatcaagaaattacatcattcaacaccgctaaaaatgtaaaggatgaatc 30818217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 41081478 - 41081573
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||  |||||||| ||| ||||||| ||| ||||||||||||||  ||||||||||||||  ||||||||| | |||||||||||    
T  41081478 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcattcaacagtgctaaaaacgtaaaacatgaatctgtgaacaaactcaca 41081573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 44637708 - 44637618
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| |||  |||||| ||| ||||| ||||||||| ||||||| ||||||||||| ||||||| | ||||||||||||| ||||||    
T  44637708 tattcattcattccaatcgatagagtacattattcaacacagctaaaatcgtaaaggatggatctgcgaataaactcacagcatccaagtt 44637618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 27873008 - 27872938
Alignment:
Q  56 gagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||| || ||||||  | |||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  27873008 gagattacaccaatcaacaatgttaaaaacgtaaatgatgaatctgcgaacaaactcacaacattcaagtt 27872938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 33816942 - 33817048
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  | |||||| ||| ||||| | | ||| |||||||||| || ||||||||| ||||||||||||| ||| ||||||||||| |||    
T  33816942 gacaaaaacaaaatgatcttcattcattcaaatcaaaatatttcatcattcaatactgctaaaaacataaaggatgaatccgcgaacaaactcacatcat 33817041  T
Q  120 tcaagtt 126  Q
     ||||||    
T  33817042 ccaagtt 33817048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 33876412 - 33876518
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  | |||||| ||| ||||| | | ||| |||||||||| || ||||||||| ||||||||||||| ||| ||||||||||| |||    
T  33876412 gacaaaaacaaaatgatcttcattcattcaaatcaaaatatttcatcattcaatactgctaaaaacataaaggatgaatccgcgaacaaactcacatcat 33876511  T
Q  120 tcaagtt 126  Q
     ||||||    
T  33876512 ccaagtt 33876518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 44543514 - 44543472
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  44543514 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 44543472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 47133152 - 47133095
Alignment:
Q  69 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||| ||| ||||||    
T  47133152 tcaacatcgctaaaaacgtaaaggataaatctgcgaacaaactcacaacatccaagtt 47133095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 15431517 - 15431565
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagt 125  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| |||||    
T  15431517 gctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagt 15431565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 24583247 - 24583153
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||  |||||||| ||| ||||||| ||| |||||||   |||| | |||||||||||||||||||||||||| | |||||||||||    
T  24583247 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaacgtaaaggatgaatctgtgaacaaactcaca 24583153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 24583443 - 24583349
Alignment:
Q  24 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||  |||||||| ||| ||||||| ||| |||||||   |||| | ||||||||| |||||||||||||||||| |||||||||||    
T  24583443 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaatgtaaaggatgaatctgcgaacaaactcaca 24583349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 49627155 - 49627116
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  49627155 cgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 49627116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 31919231 - 31919181
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||||||||||||||| |||||||| || ||| ||||||    
T  31919231 cgctaaaaacgtaaaggatgaatctgcgaacaaactcgcaacatccaagtt 31919181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 2987892 - 2987832
Alignment:
Q  141 tgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    ||||||||||| |||||||||| | | |||||||||||||| || ||||||| ||||||||    
T  2987892 tgggtgttgattgcaggggtgtttttgttggtgtttgttttcggatgttccgcctatatac 2987832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 4413361 - 4413309
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaa 123  Q
    |||| |||||||||||||||||||||||||| | ||||| |||||||| ||||    
T  4413361 aacatcgctaaaaacgtaaaggatgaatctgtgaacaaattcacagcactcaa 4413309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 39927377 - 39927424
Alignment:
Q  68 ttcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||| |||||||||| |||||||||||| |||| |||||||||||    
T  39927377 ttcaacatcgctaaaaacataaaggatgaatatgcgaacaaactcaca 39927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 48365583 - 48365646
Alignment:
Q  63 catcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||| |||| ||||||||| ||| ||| ||| |||| ||||||||||||||| ||||||    
T  48365583 catcattcagcaccactaaaaacgcaaatgattaatatgcgaacaaactcacagcatccaagtt 48365646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 49504448 - 49504487
Alignment:
Q  79 taaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  49504448 taaaaacgtaaagggtgaatctgcgaacaaactcacagca 49504487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 50730874 - 50730823
Alignment:
Q  67 attcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||||| ||||||||||||||| ||||||| || | ||||||||||||||    
T  50730874 attcaacatcgctaaaaacgtaaatgatgaatatgtgaacaaactcacagca 50730823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 7836650 - 7836688
Alignment:
Q  80 aaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  7836650 aaaaacataaaggatgaatctgcgaacaaactcacagca 7836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 32678986 - 32679041
Alignment:
Q  69 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||| ||| ||||||    
T  32678986 tcaacatcgctaaaaacgta--ggatgaatctgcgaacaaactcacaacatccaagtt 32679041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 36775560 - 36775610
Alignment:
Q  76 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||    
T  36775560 cgctaaaaacgtatagggtgaatctgcgaacaaactcacaacatccaagtt 36775610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 37582408 - 37582474
Alignment:
Q  135 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    ||||||||| ||||||||| | |||||||| | ||| ||||| |||| |||||||||||| ||||||    
T  37582408 tccttatggttgttgatcgtaagggtgtctttgttgatgtttattttcgggtgttccgtcaatatac 37582474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 5601021 - 5600968
Alignment:
Q  62 acatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    |||||||||||||  |||||||| |||||  ||||||||||| |||||||||||    
T  5601021 acatcattcaacattgctaaaaatgtaaataatgaatctgcgaacaaactcaca 5600968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 14545782 - 14545721
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaa 81  Q
    ||||||||||||||  ||||||||  || |||| ||||||||||||||||||| ||||||||    
T  14545782 gacaaaaacaaaatgatattcattcgttcaaatagagagattacatcattcaataccgctaa 14545721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 44915879 - 44915842
Alignment:
Q  78 ctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  44915879 ctaaaaacgtaaaggatgaatatgcgaacaaactcaca 44915842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 4652095 - 4652159
Alignment:
Q  137 cttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 201  Q
    |||||||||||||||| ||||| | | | | ||||||||||||||  ||||||||| ||||||||    
T  4652095 cttatgggtgttgatcacagggttttttttgttggtgtttgttttcaggtgttccgcctatatac 4652159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 29738516 - 29738556
Alignment:
Q  78 ctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    ||||||||||||||| |||||||||| || |||||||||||    
T  29738516 ctaaaaacgtaaagggtgaatctgcgaacgaactcacagca 29738556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 4492 - 4402
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| ||| ||||||    
T  4492 tattcattcatttaaatcaagagattacatcattcaacaccgctaaaaacgtaagggatgaatctgcaaacaaactcacaacatccaagtt 4402  T

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Target: scaffold0146 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 16094 - 16200
Alignment:
Q  21 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 119  Q
    ||||||||||||||  |||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| |||    
T  16094 gacaaaaacaaaatgatattcattcattcaaattgagatattacatcattcaacaccgctaaaaacgtaaaggaagaatcagcgaacaaactcacatcat 16193  T
Q  120 tcaagtt 126  Q
     ||||||    
T  16194 ccaagtt 16200  T

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Target: scaffold0003 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 361589 - 361679
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||| ||||||    
T  361589 tattcattcattcatattgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctgcgaacacactcacaacatccaagtt 361679  T

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Target: scaffold0022 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 83212 - 83316
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 120  Q
    |||||||||||||  |||||||| ||| ||||| |||||||||||||||||| | ||||||||||||||| |||||||||||| ||||||||||| |||     
T  83212 acaaaaacaaaatgatattcattcattcaaatcaagagattacatcattcaa-atcgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatc 83310  T
Q  121 caagtt 126  Q
    ||||||    
T  83311 caagtt 83316  T

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Target: scaffold0014 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 201148 - 201243
Alignment:
Q  22 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 116  Q
    |||||||||||||  |||||||| ||| ||||||| |||||||||||||||||||| ||||||| ||||||||||||| || | ||| ||||||||    
T  201148 acaaaaacaaaatgatattcattcattcaaatcgatagattacatcattcaacaccactaaaaatgtaaaggatgaatttgtgaacatactcacag 201243  T

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Target: scaffold0311 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 8978 - 8888
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||| ||| ||||||||||||||||||||||||||||| | |||| ||||||||||||| || | |||||||| ||| || ||||||    
T  8978 tattcattcattcaaatcgagagattacatcattcaacaccgtttaaaatgtaaaggatgaatatgtgaacaaactcgcagtatccaagtt 8888  T

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Target: scaffold0495 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 5686 - 5595
Alignment:
Q  38 ttcatttattaaaatcgagagat---tacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||| ||| ||||||||||||   || |||||||||||||| |||||||||||||||||||| |||| ||||||| |||| || ||||||    
T  5686 ttcattcattcaaatcgagagataattatatcattcaacaccgttaaaaacgtaaaggatgaatttgcgaacaaacttacagtatccaagtt 5595  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 57933 - 57988
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  57933 aacatcgctaaaaacgtaaaggataaatctgcgaacaaactcacagcatccaagtt 57988  T

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Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 9887 - 9934
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 118  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  9887 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 9934  T

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Target: scaffold0445 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 1588 - 1533
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||| ||||||||||||||||| |||||||||  ||||||||||| ||| ||||||    
T  1588 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacaacatccaagtt 1533  T

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Target: scaffold0113 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 36480 - 36559
Alignment:
Q  36 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 115  Q
    ||||| || ||| |||| || ||| ||| |||||||||| ||||||||||||||| ||||||||  || |||||||||||    
T  36480 tattctttcattcaaattgatagagtacttcattcaacatcgctaaaaacgtaaatgatgaatcaacgaacaaactcaca 36559  T

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Target: scaffold0884 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 1818 - 1860
Alignment:
Q  71 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactca 113  Q
    |||| ||||||||||||||||| |||||||||| |||||||||    
T  1818 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactca 1860  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 32598 - 32647
Alignment:
Q  77 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 126  Q
    |||||||||||||||| |||||||| | ||||||||||| || |||||||    
T  32598 gctaaaaacgtaaagggtgaatctgggaacaaactcacaacactcaagtt 32647  T

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Target: scaffold0372 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 9467 - 9539
Alignment:
Q  42 tttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 114  Q
    |||||| |||| || |||||||||||||||| | || |||||| | ||||||||| | |||| ||||||||||    
T  9467 tttattcaaattgatagattacatcattcaagatcgttaaaaatggaaaggatgagtttgcgaacaaactcac 9539  T

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