View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10877_low_11 (Length: 220)
Name: NF10877_low_11
Description: NF10877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10877_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 6268373 - 6268562
Alignment:
| Q |
16 |
agacagttaattaccgctcttttaatggctaacgacacttaagacttaagtgccgttgatacttgccaannnnnnncagtttgttctgatcttctttcac |
115 |
Q |
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| T |
6268373 |
agacagttaattaccgctcttttaatggctaacgacacttaagacttaagtgccgttgatacttgccaatttttttcagtttgttctgatcttctttcac |
6268472 |
T |
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| Q |
116 |
ttgaaagcaagaatagcatgcactcgcactctcacttgctcacattgcgtcacgtcttaatttactcacacttctttaagtaggaaaaac |
205 |
Q |
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| T |
6268473 |
ttgaaagcaagaatagcatgcactcacactctcacttgctcacattgcgtcacgtcttaatttactcacacttctttaagtaggaaaaac |
6268562 |
T |
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