View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10877_low_5 (Length: 286)
Name: NF10877_low_5
Description: NF10877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10877_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 35829505 - 35829774
Alignment:
| Q |
1 |
cttatagcagaacagtattcaaccccctctcttattaagcaatttttataagaagnnnnnnnn-tcatggttttaaaacttgttagtttctcaaaacatg |
99 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
35829505 |
cttatagcagaacagtattcaaccccctctcttattaagcaatttttataagaagaaaaaaaaatcatggttttaaaacttgttagtttctcaaaacatg |
35829604 |
T |
|
| Q |
100 |
tcatattttcatttaccaaaaccattataattctaatccttagttttatactttacaaagctgactcaggctgcaacaattctattacaacttcattagt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35829605 |
tcatattttcatttaccaaaaccattataattctaatccttagttttatactttacaaagctgactcaggctgcaacaattctattacaacttcattagt |
35829704 |
T |
|
| Q |
200 |
tcaaattccaccctatgatgttatcatatcactacaatcacaatcctttgatggacatttgagcttaaag |
269 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
35829705 |
tcaaatttcaccctatgatgttatcatatcactacaatcacaatcctttgatggccatttgagcttaaag |
35829774 |
T |
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