View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10877_low_8 (Length: 248)
Name: NF10877_low_8
Description: NF10877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10877_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 34415235 - 34415477
Alignment:
| Q |
1 |
taagataatatatacctaatcattaagaaagagatctaaatatagactaaaatataagattggctgtatattctgaccatgtgaataagtttgcattgaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
34415235 |
taagataatatatacctaatcattaagaaagagatctaaatatagactaaaatataagattggctgtatattctgaccattgaaataagtttgcattgaa |
34415334 |
T |
|
| Q |
101 |
aatgtaaagaattggaggcatagtcacaaggttattgataacactaagagctactaagagttcacacaatcgttgtcattgtaggaatcccccacatggc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
34415335 |
aatgtaaagaattggaggcatagtcacaaggttattggtaacactaagagctactaagagttcacacaaacgttgtcattgtaggaatcccccacatggc |
34415434 |
T |
|
| Q |
201 |
atacaccataaatctaacatttgcttacactgtccctatgctt |
243 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
34415435 |
atacaccataaatctaacatttgcttacactgtccctttgctt |
34415477 |
T |
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