View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10878_low_13 (Length: 256)

Name: NF10878_low_13
Description: NF10878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10878_low_13
NF10878_low_13
[»] chr8 (96 HSPs)
chr8 (5-245)||(35369983-35370222)
chr8 (1-245)||(35862795-35863040)
chr8 (36-245)||(13323844-13324052)
chr8 (1-238)||(39337819-39338056)
chr8 (1-245)||(36063717-36063961)
chr8 (1-245)||(21136237-21136478)
chr8 (36-238)||(24452402-24452601)
chr8 (36-245)||(21135114-21135322)
chr8 (1-245)||(37707015-37707260)
chr8 (37-237)||(37705930-37706128)
chr8 (37-242)||(41281595-41281802)
chr8 (39-245)||(24451274-24451483)
chr8 (36-245)||(16472783-16472991)
chr8 (36-245)||(16477354-16477562)
chr8 (59-245)||(35369005-35369189)
chr8 (1-245)||(13322942-13323184)
chr8 (1-233)||(35863968-35864197)
chr8 (128-245)||(39336875-39336992)
chr8 (39-238)||(36062599-36062798)
chr8 (1-243)||(41280243-41280485)
chr8 (71-238)||(1737385-1737551)
chr8 (36-114)||(21575601-21575679)
chr8 (128-238)||(37967417-37967527)
chr8 (128-245)||(17842347-17842464)
chr8 (128-208)||(41590667-41590747)
chr8 (127-216)||(17842793-17842882)
chr8 (128-207)||(6590148-6590227)
chr8 (128-207)||(8784460-8784539)
chr8 (128-207)||(9252527-9252606)
chr8 (133-244)||(32243566-32243677)
chr8 (128-238)||(5250690-5250800)
chr8 (128-238)||(36471124-36471234)
chr8 (128-206)||(43988485-43988563)
chr8 (129-207)||(44803396-44803474)
chr8 (128-216)||(37967864-37967952)
chr8 (128-216)||(41590215-41590303)
chr8 (128-207)||(42950214-42950293)
chr8 (128-206)||(10409480-10409558)
chr8 (128-206)||(21160113-21160191)
chr8 (133-207)||(30133859-30133933)
chr8 (128-216)||(2827138-2827226)
chr8 (148-208)||(33322435-33322495)
chr8 (128-207)||(1680851-1680930)
chr8 (128-207)||(14121813-14121892)
chr8 (128-207)||(14122076-14122155)
chr8 (129-216)||(21159724-21159811)
chr8 (128-203)||(31185812-31185887)
chr8 (128-195)||(36126607-36126674)
chr8 (187-245)||(16478467-16478525)
chr8 (133-207)||(44893744-44893818)
chr8 (130-215)||(6590595-6590680)
chr8 (128-216)||(8784906-8784994)
chr8 (128-237)||(18840218-18840327)
chr8 (127-208)||(44265329-44265410)
chr8 (128-207)||(547339-547418)
chr8 (128-207)||(5250265-5250344)
chr8 (133-196)||(6244392-6244455)
chr8 (128-207)||(17498823-17498902)
chr8 (128-238)||(25102261-25102369)
chr8 (131-202)||(44802362-44802429)
chr8 (133-207)||(44894742-44894816)
chr8 (37-114)||(16478528-16478605)
chr8 (137-202)||(36018002-36018066)
chr8 (130-207)||(38706773-38706850)
chr8 (129-194)||(40304870-40304935)
chr8 (129-205)||(5696245-5696320)
chr8 (128-216)||(25101837-25101925)
chr8 (131-195)||(30658329-30658393)
chr8 (1-75)||(1692644-1692719)
chr8 (128-206)||(12469307-12469385)
chr8 (128-194)||(28701997-28702063)
chr8 (133-207)||(32244729-32244803)
chr8 (164-241)||(18304914-18304989)
chr8 (167-216)||(33322861-33322910)
chr8 (128-205)||(38706318-38706395)
chr8 (167-207)||(6018374-6018414)
chr8 (36-103)||(39336808-39336873)
chr8 (164-207)||(27000698-27000741)
chr8 (167-218)||(32513958-32514009)
chr8 (128-215)||(44265777-44265864)
chr8 (133-207)||(2821314-2821386)
chr8 (128-208)||(5695795-5695868)
chr8 (145-195)||(5765608-5765658)
chr8 (138-216)||(30968991-30969069)
chr8 (164-206)||(42499693-42499735)
chr8 (167-216)||(27875360-27875409)
chr8 (167-216)||(28015540-28015589)
chr8 (164-241)||(30658734-30658810)
chr8 (167-216)||(42499294-42499343)
chr8 (167-216)||(43936431-43936480)
chr8 (128-156)||(12667024-12667052)
chr8 (128-216)||(28755497-28755585)
chr8 (164-216)||(30806251-30806303)
chr8 (171-207)||(32514375-32514411)
chr8 (128-216)||(43622667-43622755)
chr8 (164-208)||(43623124-43623168)
[»] chr5 (85 HSPs)
chr5 (1-245)||(8217274-8217511)
chr5 (39-242)||(13919858-13920061)
chr5 (36-245)||(34526825-34527031)
chr5 (36-245)||(38693730-38693940)
chr5 (1-245)||(8218292-8218537)
chr5 (1-235)||(13920954-13921190)
chr5 (1-245)||(43441154-43441398)
chr5 (1-234)||(26864989-26865222)
chr5 (1-235)||(34527409-34527638)
chr5 (36-245)||(26865974-26866179)
chr5 (128-245)||(41138909-41139026)
chr5 (65-245)||(38691802-38691982)
chr5 (1-245)||(43440007-43440249)
chr5 (128-233)||(18950960-18951065)
chr5 (158-245)||(41139937-41140024)
chr5 (128-208)||(42877940-42878020)
chr5 (128-203)||(21837027-21837102)
chr5 (128-205)||(40158149-40158226)
chr5 (130-207)||(22023399-22023476)
chr5 (128-207)||(27307704-27307783)
chr5 (128-238)||(8313094-8313203)
chr5 (128-238)||(17742218-17742327)
chr5 (128-208)||(10674526-10674606)
chr5 (128-203)||(4462286-4462361)
chr5 (128-207)||(10463623-10463702)
chr5 (126-193)||(16966076-16966143)
chr5 (133-207)||(3407221-3407295)
chr5 (128-216)||(8404271-8404359)
chr5 (127-216)||(24637262-24637351)
chr5 (128-192)||(4462458-4462522)
chr5 (128-208)||(42853058-42853138)
chr5 (128-207)||(4425905-4425984)
chr5 (128-195)||(4463110-4463177)
chr5 (128-207)||(28456471-28456550)
chr5 (128-195)||(30394433-30394500)
chr5 (130-207)||(2004286-2004366)
chr5 (128-206)||(8336726-8336804)
chr5 (133-207)||(19332351-19332425)
chr5 (133-238)||(40272346-40272451)
chr5 (128-216)||(17742657-17742745)
chr5 (128-202)||(8404735-8404809)
chr5 (128-218)||(32510477-32510567)
chr5 (133-191)||(37812172-37812230)
chr5 (133-195)||(43210972-43211034)
chr5 (128-241)||(3548643-3548755)
chr5 (128-193)||(8313561-8313626)
chr5 (128-205)||(9687838-9687915)
chr5 (1-106)||(41140052-41140158)
chr5 (128-240)||(41193275-41193388)
chr5 (128-216)||(42877492-42877578)
chr5 (134-207)||(43538478-43538551)
chr5 (128-216)||(4461840-4461928)
chr5 (128-216)||(9687408-9687496)
chr5 (128-204)||(30403453-30403529)
chr5 (128-207)||(621958-622037)
chr5 (128-207)||(1683495-1683574)
chr5 (127-194)||(10464088-10464155)
chr5 (133-196)||(19333301-19333364)
chr5 (130-197)||(22166751-22166818)
chr5 (133-195)||(2005376-2005438)
chr5 (133-207)||(2263123-2263197)
chr5 (167-205)||(6365213-6365251)
chr5 (128-206)||(28237291-28237369)
chr5 (149-207)||(30734158-30734216)
chr5 (128-194)||(34010274-34010340)
chr5 (164-202)||(37446745-37446783)
chr5 (167-216)||(30394003-30394052)
chr5 (128-205)||(34785127-34785204)
chr5 (132-216)||(40158594-40158678)
chr5 (128-207)||(2003836-2003915)
chr5 (129-216)||(4426352-4426439)
chr5 (129-216)||(8337172-8337259)
chr5 (128-195)||(21837290-21837357)
chr5 (128-207)||(27280065-27280144)
chr5 (128-203)||(27335514-27335589)
chr5 (127-206)||(28615905-28615983)
chr5 (128-202)||(14049633-14049707)
chr5 (147-197)||(15875548-15875598)
chr5 (128-206)||(31211530-31211608)
chr5 (128-178)||(35529778-35529828)
chr5 (164-205)||(14050069-14050110)
chr5 (167-216)||(37103361-37103410)
chr5 (36-109)||(41138822-41138895)
chr5 (167-195)||(22023013-22023041)
chr5 (164-196)||(42645234-42645266)
[»] scaffold0148 (2 HSPs)
scaffold0148 (36-245)||(38673-38881)
scaffold0148 (43-238)||(35075-35269)
[»] chr4 (86 HSPs)
chr4 (3-238)||(37329696-37329933)
chr4 (1-238)||(25422985-25423221)
chr4 (36-245)||(53571823-53572029)
chr4 (36-245)||(25243896-25244104)
chr4 (37-245)||(33689587-33689790)
chr4 (36-242)||(31316332-31316538)
chr4 (37-241)||(25421859-25422064)
chr4 (36-245)||(11670928-11671136)
chr4 (1-245)||(53568911-53569156)
chr4 (36-245)||(11669914-11670120)
chr4 (36-245)||(31470756-31470963)
chr4 (36-238)||(53570801-53571002)
chr4 (37-245)||(10321489-10321696)
chr4 (38-241)||(44209780-44209982)
chr4 (1-245)||(33688433-33688677)
chr4 (1-245)||(44208633-44208876)
chr4 (1-245)||(31317850-31318092)
chr4 (39-245)||(10322611-10322816)
chr4 (77-245)||(35061119-35061285)
chr4 (38-192)||(15562724-15562877)
chr4 (128-197)||(23473822-23473891)
chr4 (128-207)||(10085370-10085449)
chr4 (132-238)||(47463304-47463409)
chr4 (128-207)||(19522595-19522674)
chr4 (128-206)||(20650727-20650805)
chr4 (127-216)||(3862365-3862453)
chr4 (127-216)||(3871122-3871210)
chr4 (128-216)||(3872922-3873010)
chr4 (128-207)||(19523052-19523131)
chr4 (128-207)||(22067982-22068061)
chr4 (128-238)||(51395913-51396024)
chr4 (133-207)||(13508756-13508830)
chr4 (133-207)||(48738397-48738471)
chr4 (128-208)||(28448717-28448798)
chr4 (128-204)||(47379511-47379587)
chr4 (128-207)||(4849977-4850056)
chr4 (128-207)||(52948093-52948172)
chr4 (129-204)||(53423895-53423970)
chr4 (1-111)||(35054942-35055053)
chr4 (128-216)||(7491021-7491109)
chr4 (128-216)||(7617295-7617383)
chr4 (129-206)||(30331611-30331690)
chr4 (128-203)||(7617652-7617727)
chr4 (128-207)||(47379055-47379134)
chr4 (128-202)||(27392497-27392571)
chr4 (133-207)||(28164055-28164128)
chr4 (129-207)||(28448268-28448346)
chr4 (128-238)||(38114513-38114623)
chr4 (133-207)||(44451975-44452049)
chr4 (129-207)||(47309319-47309397)
chr4 (135-205)||(48220220-48220290)
chr4 (128-205)||(33177754-33177831)
chr4 (128-193)||(43938286-43938351)
chr4 (128-216)||(44289996-44290085)
chr4 (167-216)||(55938399-55938448)
chr4 (128-216)||(10085813-10085901)
chr4 (128-208)||(14579060-14579140)
chr4 (128-216)||(22068428-22068516)
chr4 (128-216)||(33177298-33177386)
chr4 (167-207)||(38499627-38499667)
chr4 (128-216)||(47309764-47309852)
chr4 (128-216)||(51395490-51395578)
chr4 (128-207)||(3873504-3873582)
chr4 (128-207)||(38499172-38499251)
chr4 (128-195)||(48082796-48082863)
chr4 (133-207)||(34513349-34513423)
chr4 (128-207)||(55282990-55283071)
chr4 (128-205)||(7490580-7490657)
chr4 (167-218)||(4850422-4850474)
chr4 (131-207)||(7499081-7499157)
chr4 (128-216)||(45557970-45558057)
chr4 (128-195)||(52947639-52947706)
chr4 (164-207)||(28163151-28163194)
chr4 (127-197)||(6818140-6818210)
chr4 (139-205)||(38114125-38114191)
chr4 (164-206)||(42973016-42973058)
chr4 (167-237)||(48082366-48082436)
chr4 (164-205)||(1870446-1870487)
chr4 (167-216)||(35351551-35351600)
chr4 (129-182)||(42972666-42972719)
chr4 (167-216)||(44289600-44289649)
chr4 (164-213)||(48219801-48219850)
chr4 (131-216)||(53324105-53324190)
chr4 (167-195)||(6589116-6589144)
chr4 (164-216)||(20650417-20650469)
chr4 (128-156)||(40391119-40391147)
[»] chr3 (79 HSPs)
chr3 (1-245)||(45234473-45234718)
chr3 (1-238)||(116681-116918)
chr3 (1-245)||(1430197-1430442)
chr3 (36-245)||(45235640-45235846)
chr3 (36-245)||(50615365-50615573)
chr3 (36-245)||(37178733-37178942)
chr3 (36-245)||(53396887-53397096)
chr3 (36-245)||(54185610-54185825)
chr3 (36-245)||(44557863-44558069)
chr3 (1-245)||(27867834-27868076)
chr3 (46-245)||(117728-117925)
chr3 (38-245)||(19669494-19669700)
chr3 (36-221)||(32942781-32942965)
chr3 (38-245)||(53439117-53439325)
chr3 (39-245)||(45387239-45387440)
chr3 (36-238)||(44555160-44555358)
chr3 (1-245)||(37179862-37180102)
chr3 (1-238)||(50614303-50614540)
chr3 (36-245)||(32146793-32146997)
chr3 (39-245)||(32943905-32944105)
chr3 (1-245)||(32147894-32148136)
chr3 (128-241)||(37481354-37481467)
chr3 (39-215)||(41786404-41786574)
chr3 (128-216)||(23917213-23917301)
chr3 (128-208)||(53518115-53518195)
chr3 (128-207)||(44809169-44809248)
chr3 (133-238)||(8576204-8576309)
chr3 (128-205)||(29348160-29348237)
chr3 (128-207)||(53377605-53377684)
chr3 (128-195)||(34995423-34995490)
chr3 (128-203)||(53377208-53377283)
chr3 (133-207)||(52701050-52701124)
chr3 (128-216)||(23917648-23917737)
chr3 (129-202)||(33225673-33225746)
chr3 (133-238)||(41928139-41928244)
chr3 (129-197)||(33226761-33226829)
chr3 (37-173)||(54185395-54185531)
chr3 (129-216)||(9018351-9018438)
chr3 (128-207)||(11045286-11045365)
chr3 (128-207)||(25249899-25249978)
chr3 (129-216)||(38174232-38174319)
chr3 (128-207)||(40762478-40762557)
chr3 (133-207)||(52701992-52702066)
chr3 (128-237)||(19601433-19601542)
chr3 (128-205)||(38173786-38173863)
chr3 (128-207)||(14525127-14525206)
chr3 (128-216)||(45419662-45419750)
chr3 (128-216)||(53517661-53517749)
chr3 (128-207)||(3173809-3173888)
chr3 (128-207)||(29348611-29348690)
chr3 (133-196)||(31990956-31991019)
chr3 (128-207)||(44808716-44808795)
chr3 (132-207)||(45420115-45420189)
chr3 (133-207)||(8575193-8575267)
chr3 (133-207)||(25233193-25233267)
chr3 (133-207)||(33475359-33475433)
chr3 (133-238)||(25353258-25353363)
chr3 (129-189)||(23883683-23883743)
chr3 (128-216)||(34995860-34995948)
chr3 (128-216)||(46295384-46295472)
chr3 (128-208)||(54269176-54269255)
chr3 (131-241)||(21749452-21749563)
chr3 (128-207)||(25250354-25250433)
chr3 (133-188)||(44556953-44557008)
chr3 (167-238)||(46294974-46295045)
chr3 (133-238)||(44555806-44555911)
chr3 (164-204)||(15771816-15771856)
chr3 (128-208)||(27492198-27492278)
chr3 (128-216)||(27492644-27492732)
chr3 (163-206)||(16056281-16056324)
chr3 (133-188)||(41927160-41927215)
chr3 (129-216)||(54268732-54268819)
chr3 (129-207)||(28260540-28260618)
chr3 (128-209)||(20336778-20336859)
chr3 (164-193)||(31991994-31992023)
chr3 (167-216)||(39562461-39562510)
chr3 (164-208)||(4017186-4017230)
chr3 (128-156)||(28769647-28769675)
chr3 (164-208)||(40762931-40762975)
[»] chr2 (79 HSPs)
chr2 (1-245)||(23787837-23788081)
chr2 (1-245)||(42487962-42488205)
chr2 (38-245)||(44492677-44492884)
chr2 (36-238)||(1373499-1373700)
chr2 (36-245)||(20719325-20719535)
chr2 (37-238)||(21439090-21439290)
chr2 (1-245)||(20701009-20701257)
chr2 (1-237)||(23787378-23787613)
chr2 (36-245)||(3105712-3105918)
chr2 (36-227)||(20721529-20721718)
chr2 (36-237)||(43933036-43933239)
chr2 (36-245)||(18672058-18672260)
chr2 (36-234)||(3104785-3104983)
chr2 (1-238)||(33001161-33001399)
chr2 (36-238)||(42486847-42487047)
chr2 (59-241)||(20719765-20719946)
chr2 (1-245)||(20720844-20721085)
chr2 (1-245)||(44493794-44494037)
chr2 (1-238)||(43931898-43932137)
chr2 (1-245)||(18673106-18673349)
chr2 (36-245)||(21440113-21440315)
chr2 (128-208)||(31435922-31436002)
chr2 (129-207)||(13027777-13027855)
chr2 (128-207)||(4327936-4328015)
chr2 (128-207)||(31771200-31771279)
chr2 (128-217)||(41120626-41120715)
chr2 (129-207)||(44287014-44287092)
chr2 (128-241)||(25100469-25100582)
chr2 (1-114)||(33000729-33000843)
chr2 (127-207)||(8392659-8392739)
chr2 (133-244)||(9111970-9112081)
chr2 (128-207)||(34073897-34073976)
chr2 (133-207)||(30982510-30982584)
chr2 (133-238)||(9111458-9111563)
chr2 (128-197)||(35498454-35498523)
chr2 (133-205)||(3117864-3117936)
chr2 (127-207)||(6457151-6457231)
chr2 (128-216)||(14200841-14200929)
chr2 (128-216)||(35498881-35498969)
chr2 (128-216)||(41121069-41121157)
chr2 (127-206)||(14201300-14201379)
chr2 (133-238)||(32318105-32318210)
chr2 (128-216)||(25666333-25666421)
chr2 (133-208)||(25665929-25666004)
chr2 (128-207)||(36512307-36512385)
chr2 (164-238)||(10357236-10357309)
chr2 (133-207)||(30982723-30982796)
chr2 (133-207)||(32319276-32319350)
chr2 (128-210)||(33030905-33030987)
chr2 (1-83)||(38276100-38276183)
chr2 (133-238)||(3118807-3118912)
chr2 (128-208)||(19176646-19176726)
chr2 (128-216)||(31771648-31771735)
chr2 (127-208)||(33832454-33832535)
chr2 (128-216)||(42274176-42274263)
chr2 (128-208)||(10357654-10357734)
chr2 (128-216)||(13371872-13371960)
chr2 (128-216)||(33832001-33832089)
chr2 (128-195)||(30749428-30749495)
chr2 (128-195)||(37592764-37592831)
chr2 (133-207)||(7655045-7655118)
chr2 (133-207)||(32319853-32319927)
chr2 (167-216)||(33031345-33031394)
chr2 (128-205)||(40364763-40364840)
chr2 (128-207)||(29809131-29809210)
chr2 (128-216)||(30784504-30784591)
chr2 (127-207)||(44610644-44610724)
chr2 (129-216)||(18917118-18917204)
chr2 (164-207)||(40365214-40365257)
chr2 (171-205)||(30784114-30784148)
chr2 (128-205)||(3043695-3043772)
chr2 (128-197)||(8738623-8738692)
chr2 (170-206)||(7439147-7439183)
chr2 (167-207)||(8737743-8737783)
chr2 (128-156)||(8794801-8794829)
chr2 (135-203)||(13372257-13372324)
chr2 (128-156)||(27694424-27694452)
chr2 (176-208)||(33031018-33031050)
chr2 (128-216)||(44879595-44879683)
[»] chr6 (70 HSPs)
chr6 (36-245)||(3335461-3335670)
chr6 (36-245)||(22971688-22971897)
chr6 (36-245)||(23816501-23816710)
chr6 (1-245)||(18503273-18503516)
chr6 (37-244)||(5078791-5078998)
chr6 (38-245)||(8230998-8231205)
chr6 (37-238)||(5079808-5080008)
chr6 (1-238)||(17246382-17246618)
chr6 (3-245)||(22972082-22972321)
chr6 (3-245)||(23816077-23816316)
chr6 (132-245)||(17244428-17244541)
chr6 (128-207)||(861692-861771)
chr6 (128-238)||(30492606-30492716)
chr6 (129-202)||(18804125-18804198)
chr6 (128-238)||(2087323-2087432)
chr6 (129-207)||(30660664-30660742)
chr6 (128-216)||(33744538-33744626)
chr6 (128-207)||(843987-844066)
chr6 (128-207)||(17697266-17697345)
chr6 (128-202)||(939180-939254)
chr6 (128-206)||(14256478-14256556)
chr6 (128-194)||(20898325-20898391)
chr6 (133-238)||(288888-288992)
chr6 (128-216)||(5974185-5974273)
chr6 (131-207)||(15721397-15721473)
chr6 (128-208)||(20510376-20510456)
chr6 (127-246)||(33518649-33518769)
chr6 (128-191)||(16465413-16465476)
chr6 (128-207)||(22732330-22732408)
chr6 (128-207)||(26356412-26356491)
chr6 (129-195)||(861235-861301)
chr6 (133-207)||(3913148-3913222)
chr6 (133-207)||(3914752-3914826)
chr6 (133-207)||(5086753-5086827)
chr6 (168-238)||(11400370-11400440)
chr6 (128-206)||(12482121-12482199)
chr6 (128-208)||(1821315-1821395)
chr6 (128-216)||(15720939-15721027)
chr6 (164-216)||(24958798-24958849)
chr6 (133-195)||(28083288-28083350)
chr6 (128-205)||(1820869-1820945)
chr6 (130-207)||(8710178-8710255)
chr6 (167-208)||(20897727-20897768)
chr6 (131-207)||(28476099-28476175)
chr6 (132-204)||(29692246-29692317)
chr6 (128-207)||(10915645-10915724)
chr6 (166-205)||(16465382-16465421)
chr6 (129-204)||(29691790-29691865)
chr6 (129-216)||(30493039-30493126)
chr6 (128-238)||(938728-938838)
chr6 (133-238)||(289660-289765)
chr6 (165-206)||(10915223-10915264)
chr6 (167-216)||(22731913-22731962)
chr6 (164-205)||(30661119-30661160)
chr6 (129-197)||(2958612-2958680)
chr6 (128-184)||(5974694-5974750)
chr6 (128-184)||(8709691-8709747)
chr6 (128-216)||(16736529-16736617)
chr6 (128-195)||(5087069-5087136)
chr6 (168-207)||(5974641-5974680)
chr6 (164-207)||(21108399-21108442)
chr6 (128-207)||(3375172-3375253)
chr6 (127-157)||(3807065-3807095)
chr6 (128-190)||(26356888-26356949)
chr6 (127-189)||(30394764-30394826)
chr6 (128-157)||(6197808-6197837)
chr6 (128-216)||(20977693-20977782)
chr6 (164-220)||(3375616-3375672)
chr6 (164-216)||(33518280-33518332)
chr6 (128-216)||(33744986-33745074)
[»] chr1 (80 HSPs)
chr1 (36-238)||(36249160-36249361)
chr1 (37-245)||(36368184-36368392)
chr1 (36-238)||(12367496-12367697)
chr1 (1-245)||(30981508-30981749)
chr1 (1-245)||(33709239-33709483)
chr1 (38-245)||(11999512-11999718)
chr1 (36-245)||(33708114-33708320)
chr1 (37-245)||(37986988-37987194)
chr1 (45-238)||(37986011-37986203)
chr1 (1-238)||(46595911-46596147)
chr1 (1-238)||(29231945-29232182)
chr1 (59-245)||(12368524-12368708)
chr1 (1-245)||(36248091-36248334)
chr1 (39-245)||(36362275-36362478)
chr1 (37-245)||(533904-534114)
chr1 (1-238)||(15054493-15054730)
chr1 (36-201)||(30982694-30982859)
chr1 (128-242)||(29231209-29231323)
chr1 (36-215)||(15053440-15053617)
chr1 (171-245)||(46597069-46597143)
chr1 (128-197)||(46517416-46517485)
chr1 (128-206)||(19791123-19791201)
chr1 (133-207)||(51840106-51840180)
chr1 (128-197)||(41331946-41332015)
chr1 (128-208)||(30742660-30742740)
chr1 (128-207)||(2058961-2059040)
chr1 (128-207)||(13501089-13501168)
chr1 (128-207)||(48410005-48410084)
chr1 (133-207)||(11396921-11396995)
chr1 (133-207)||(25351845-25351919)
chr1 (133-207)||(27551827-27551901)
chr1 (128-216)||(21794663-21794751)
chr1 (128-216)||(26805368-26805456)
chr1 (128-208)||(26805823-26805903)
chr1 (128-203)||(21794294-21794369)
chr1 (129-208)||(47008961-47009040)
chr1 (135-206)||(52881487-52881558)
chr1 (133-207)||(25352778-25352852)
chr1 (128-194)||(42972316-42972382)
chr1 (133-207)||(49767575-49767649)
chr1 (133-207)||(51338351-51338425)
chr1 (133-238)||(12897391-12897496)
chr1 (133-238)||(48218151-48218256)
chr1 (128-208)||(33707246-33707326)
chr1 (132-216)||(52493416-52493500)
chr1 (127-241)||(30719361-30719476)
chr1 (128-191)||(35188521-35188584)
chr1 (129-208)||(35531125-35531204)
chr1 (129-207)||(48410483-48410561)
chr1 (128-207)||(51561223-51561302)
chr1 (128-207)||(51561680-51561759)
chr1 (164-238)||(35530707-35530780)
chr1 (133-207)||(51339929-51340003)
chr1 (133-207)||(52010685-52010759)
chr1 (129-194)||(21090938-21091003)
chr1 (128-208)||(5430441-5430521)
chr1 (129-208)||(10041119-10041199)
chr1 (128-216)||(47008553-47008641)
chr1 (164-244)||(51841298-51841378)
chr1 (128-207)||(20357273-20357352)
chr1 (128-207)||(20562603-20562682)
chr1 (164-207)||(28701255-28701298)
chr1 (133-196)||(52882640-52882703)
chr1 (164-216)||(10041562-10041613)
chr1 (164-208)||(13971072-13971116)
chr1 (168-207)||(13501544-13501583)
chr1 (164-207)||(26020733-26020776)
chr1 (133-196)||(27550683-27550746)
chr1 (128-207)||(28700837-28700916)
chr1 (128-207)||(33707702-33707780)
chr1 (168-206)||(13083368-13083406)
chr1 (128-238)||(31400103-31400213)
chr1 (127-216)||(2059676-2059765)
chr1 (170-203)||(31024391-31024424)
chr1 (167-216)||(31400549-31400598)
chr1 (167-216)||(46517087-46517136)
chr1 (167-195)||(26020316-26020344)
chr1 (128-216)||(30719810-30719898)
chr1 (128-156)||(33752870-33752898)
chr1 (128-208)||(35188065-35188144)
[»] chr7 (80 HSPs)
chr7 (36-242)||(33624580-33624786)
chr7 (36-241)||(46330591-46330796)
chr7 (1-245)||(33625701-33625943)
chr7 (1-245)||(46331661-46331904)
chr7 (1-238)||(38199869-38200106)
chr7 (36-245)||(38198856-38199063)
chr7 (36-237)||(15131631-15131829)
chr7 (37-245)||(44166938-44167142)
chr7 (36-242)||(46044589-46044795)
chr7 (37-245)||(45957901-45958106)
chr7 (36-241)||(43084140-43084339)
chr7 (38-242)||(45958955-45959159)
chr7 (1-241)||(46043425-46043660)
chr7 (1-238)||(3495416-3495650)
chr7 (1-238)||(43083086-43083321)
chr7 (36-238)||(3496484-3496683)
chr7 (128-208)||(6588571-6588651)
chr7 (129-207)||(12908565-12908643)
chr7 (1-114)||(44168205-44168318)
chr7 (128-207)||(21109680-21109759)
chr7 (171-240)||(15130638-15130707)
chr7 (128-241)||(18058890-18059003)
chr7 (128-216)||(47792176-47792264)
chr7 (128-207)||(27728090-27728169)
chr7 (128-207)||(38158833-38158912)
chr7 (128-207)||(43574123-43574202)
chr7 (128-238)||(1260024-1260134)
chr7 (133-207)||(8832597-8832671)
chr7 (128-241)||(22378756-22378869)
chr7 (133-207)||(25270502-25270576)
chr7 (128-245)||(29156259-29156377)
chr7 (129-202)||(12932894-12932967)
chr7 (39-147)||(15130539-15130645)
chr7 (128-216)||(6331226-6331314)
chr7 (128-208)||(37537370-37537450)
chr7 (128-204)||(44080842-44080918)
chr7 (128-207)||(7238909-7238988)
chr7 (128-207)||(14990878-14990957)
chr7 (128-207)||(15420489-15420568)
chr7 (128-207)||(43597815-43597894)
chr7 (133-207)||(37107568-37107642)
chr7 (133-207)||(38595326-38595400)
chr7 (133-207)||(40304523-40304597)
chr7 (127-207)||(4900195-4900275)
chr7 (128-208)||(6589287-6589367)
chr7 (128-216)||(10620397-10620485)
chr7 (133-205)||(42974617-42974689)
chr7 (144-208)||(47791735-47791799)
chr7 (128-207)||(4883946-4884025)
chr7 (133-196)||(18798829-18798892)
chr7 (128-203)||(35482392-35482467)
chr7 (133-207)||(12621905-12621979)
chr7 (128-202)||(28924382-28924455)
chr7 (133-207)||(40303988-40304062)
chr7 (183-245)||(44168073-44168135)
chr7 (128-241)||(6330838-6330951)
chr7 (128-197)||(11397293-11397362)
chr7 (129-202)||(15654422-15654495)
chr7 (128-216)||(27727102-27727190)
chr7 (128-216)||(38599300-38599388)
chr7 (133-196)||(8081698-8081761)
chr7 (128-207)||(10620840-10620919)
chr7 (133-196)||(38593164-38593226)
chr7 (128-207)||(43597361-43597440)
chr7 (133-207)||(1065580-1065654)
chr7 (128-194)||(38159304-38159370)
chr7 (167-208)||(1544806-1544847)
chr7 (168-216)||(22378375-22378423)
chr7 (128-216)||(28924823-28924911)
chr7 (128-196)||(37540136-37540204)
chr7 (167-197)||(1544392-1544422)
chr7 (129-195)||(14990426-14990492)
chr7 (129-195)||(15420037-15420103)
chr7 (164-206)||(15652713-15652755)
chr7 (164-194)||(43574590-43574620)
chr7 (164-197)||(1961817-1961850)
chr7 (128-181)||(15492886-15492939)
chr7 (167-216)||(38598890-38598939)
chr7 (167-195)||(10463212-10463240)
chr7 (129-177)||(15434710-15434758)
[»] scaffold0097 (4 HSPs)
scaffold0097 (36-245)||(23163-23373)
scaffold0097 (36-227)||(25357-25546)
scaffold0097 (59-241)||(23603-23784)
scaffold0097 (36-245)||(24682-24887)
[»] scaffold0651 (2 HSPs)
scaffold0651 (36-242)||(7160-7365)
scaffold0651 (1-245)||(5578-5820)
[»] scaffold0093 (1 HSPs)
scaffold0093 (1-245)||(49052-49293)
[»] scaffold0003 (4 HSPs)
scaffold0003 (1-245)||(240293-240536)
scaffold0003 (161-238)||(239409-239486)
scaffold0003 (1-114)||(239265-239379)
scaffold0003 (128-202)||(120634-120708)
[»] scaffold0385 (2 HSPs)
scaffold0385 (36-245)||(10244-10451)
scaffold0385 (56-238)||(9240-9418)
[»] scaffold0287 (1 HSPs)
scaffold0287 (36-238)||(25-224)
[»] scaffold0514 (2 HSPs)
scaffold0514 (128-205)||(6509-6586)
scaffold0514 (129-215)||(6059-6145)
[»] scaffold0125 (1 HSPs)
scaffold0125 (128-203)||(21882-21957)
[»] scaffold1190 (2 HSPs)
scaffold1190 (128-205)||(525-602)
scaffold1190 (129-215)||(80-166)
[»] scaffold0036 (2 HSPs)
scaffold0036 (128-244)||(17671-17788)
scaffold0036 (129-218)||(17255-17344)
[»] scaffold0627 (1 HSPs)
scaffold0627 (128-208)||(6817-6897)
[»] scaffold0562 (2 HSPs)
scaffold0562 (128-216)||(3741-3829)
scaffold0562 (128-207)||(4323-4401)
[»] scaffold0707 (2 HSPs)
scaffold0707 (127-246)||(7193-7313)
scaffold0707 (164-216)||(6824-6876)
[»] scaffold0640 (1 HSPs)
scaffold0640 (128-216)||(3768-3856)
[»] scaffold0445 (2 HSPs)
scaffold0445 (128-216)||(5794-5882)
scaffold0445 (128-207)||(6251-6329)
[»] scaffold0571 (1 HSPs)
scaffold0571 (129-216)||(8782-8868)
[»] scaffold0199 (1 HSPs)
scaffold0199 (128-207)||(6088-6167)
[»] scaffold0014 (1 HSPs)
scaffold0014 (128-208)||(123471-123550)
[»] scaffold1191 (2 HSPs)
scaffold1191 (164-216)||(998-1049)
scaffold1191 (128-208)||(553-633)
[»] scaffold0005 (3 HSPs)
scaffold0005 (128-208)||(238235-238315)
scaffold0005 (163-238)||(282852-282927)
scaffold0005 (136-207)||(283569-283640)
[»] scaffold0001 (1 HSPs)
scaffold0001 (128-216)||(157906-157993)
[»] scaffold0734 (2 HSPs)
scaffold0734 (128-195)||(2728-2795)
scaffold0734 (128-216)||(3471-3559)
[»] scaffold0112 (1 HSPs)
scaffold0112 (128-203)||(27064-27139)
[»] scaffold0024 (1 HSPs)
scaffold0024 (167-207)||(47767-47807)
[»] scaffold0586 (1 HSPs)
scaffold0586 (128-207)||(5923-6002)
[»] scaffold1160 (2 HSPs)
scaffold1160 (128-206)||(1528-1605)
scaffold1160 (164-205)||(1077-1118)
[»] scaffold0233 (2 HSPs)
scaffold0233 (128-157)||(17065-17094)
scaffold0233 (128-156)||(16834-16862)


Alignment Details
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 96)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 5 - 245
Target Start/End: Complemental strand, 35370222 - 35369983
Alignment:
Q  5 tttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgc 104  Q
    ||||||||||||||||||||||||       ||||||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  35370222 tttattaaatttttggtcccaacgtttttttccgttagcaaaataggttctcgttgttaattgttgctgattgagcaaaaggtgaagcacacgtggatgc 35370123  T
Q  105 cacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttag 204  Q
    ||||||||||        |||  ||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  35370122 cacatctgacttttttt-gttgggttaaatatgtttttagtccctataaaatcgaaacattttaagtttagtctttacttaattttaatagttgttttag 35370024  T
Q  205 tcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  35370023 tcctcacaaaaatactatgcatttagtattaatctctgctc 35369983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 35862795 - 35863040
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||| |||| ||||       ||||||||||||||||||  || ||||||||||||||||| ||||||| |||||||||||| ||    
T  35862795 aaattttattaaatttttgatccccaacgtttttttccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacatg 35862894  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||| ||||||||||        |||  |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35862895 gatgtcacatctgacttttttttgttgggttaaatacgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgt 35862994  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  35862995 tttagtccttacaaaaatactatgcactcagtattagtctctgctc 35863040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 13324052 - 13323844
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || |||||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||        |||  ||||||||    
T  13324052 ccgttagcaaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtggatgtcacatctgacttttttt-gttgggttaaata 13323954  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  13323953 tgtttttagtccttataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcagtatta 13323854  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  13323853 gtctctgctc 13323844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 39338056 - 39337819
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       |||||||| |||||||||| || ||||||||||||||||| ||||||| |||||||||||||||    
T  39338056 aaattttattaaatttttggtccccaacgtttttttccgttagcgaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtg 39337957  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39337956 gatgccacatctgacttttttt-gttgggttaaatatgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgt 39337858  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||| | |||||||||||||||| | ||||||||||    
T  39337857 tttagtcgttacaaaaatactatgcacttagtattagtc 39337819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 36063961 - 36063717
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||| |||| ||||       | ||||||||||||||||| | |||||||||||||||||| ||  ||| |||||||||||||||    
T  36063961 aaattttattaaatttttgatccccaacgtttttttctgttagcaaaataggtcctcattgttaattgttgctgattgat-aaacggtgaagcacacgtg 36063863  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||| ||||||||||        ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  36063862 gatgtcacatctgacttttttttgttgagttaaatatgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagctgt 36063763  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||| ||||| |||||||||||||||| |||||||||||||||||||    
T  36063762 ttttgtccttacaaaaatactatgcactcagtattagtctctgctc 36063717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 21136478 - 21136237
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||||| || ||||       ||||||||||||||||||| || ||||||||||||||||| ||||||| ||||||||||||  |    
T  21136478 aaattttattaaatttttggttcctaacgtttttttccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacacg 21136379  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||| ||         ||  |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21136378 gatgccacatctcacttttt----tttggttaaatatgtttttagtccctgtaaaattgaggcattttaagtttagtccttacttaattttaatagttgt 21136283  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||    
T  21136282 tttagtccttacaaaaatactatgcactcagtattagtccctgctc 21136237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 36 - 238
Target Start/End: Complemental strand, 24452601 - 24452402
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||         ||  ||||||||    
T  24452601 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacatggatgccacatctgactatttt---tttggttaaata 24452505  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||    
T  24452504 tgtttttagtccctgtaaaattgaggcattttaagtttagtccttacttaattttaataattgttttagtccttacaaaaatactatgcactcagtatta 24452405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 21135114 - 21135322
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||        |||  ||||||||    
T  21135114 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcatacgtggatgccacatctgacttttttttgttgggttaaata 21135213  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||  ||||||||    
T  21135214 tgtttttagtccctataaaattgagacattttaagtttagtccttacttaattttcataattgttttagtccttacaaaaatattatgca-ccagtatta 21135312  T
Q  236 gtctctgctc 245  Q
    || |||||||    
T  21135313 gtttctgctc 21135322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 37707260 - 37707015
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||| |||| ||||       ||||||| ||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||    
T  37707260 aaattttattaaatttttgatccccaacgtttttttccgttagaaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtg 37707161  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||| ||||||||||        |||  ||||||||| |||||| |||||||||| | ||||||||||||||||||||||| || ||||||||||||| |    
T  37707160 gatgtcacatctgacatttttttgttgggttaaatatatttttaatccctataaatttgaggcattttaagtttagtccttgctaaattttaatagttat 37707061  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||    
T  37707060 tttagtccttacaaaaatactatgcactcagtattggtctctgctc 37707015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 37 - 237
Target Start/End: Original strand, 37705930 - 37706128
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    |||||||||||||||||| || |||||||||||| |||| |||||||  ||||||||||| |||||||||||||||||         ||  |||||||||    
T  37705930 cgttagcaaaataggtcctcgctgttaattgttgttgattgagcaaacagtgaagcacacatggatgccacatctgacttttttt--tttggttaaatat 37706027  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  37706028 gtttttagtccttgtaaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacagaaatactatgcactcagtattag 37706127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 37 - 242
Target Start/End: Complemental strand, 41281802 - 41281595
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnn--gttcagttaaat 134  Q
    |||||||||||||||| | || |||||| ||||| |||| ||||||| ||||||||||||||||||||||||||| ||          |||  |||||||    
T  41281802 cgttagcaaaataggttctcgctgttaaatgttgttgattgagcaaacggtgaagcacacgtggatgccacatctaacttttttttttgttgggttaaat 41281703  T
Q  135 atgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatt 234  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||||    
T  41281702 atgtttttagtccctataaaattgaggcattttaagtttaatccttacttaattttaataattgttttagtccttacaaaaatattatgcactcaatatt 41281603  T
Q  235 agtctctg 242  Q
    ||||||||    
T  41281602 agtctctg 41281595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 39 - 245
Target Start/End: Original strand, 24451274 - 24451483
Alignment:
Q  39 ttagcaaaataggtccgcgttgttaattgttg---ctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||||||||||  |  ||||||||||||   ||||| ||||||| |||||||||||||||||||| |||||||||        |||  ||||||||    
T  24451274 ttagcaaaataggtcttcactgttaattgttgttactgattgagcaaacggtgaagcacacgtggatgcaacatctgacttttttttgttgggttaaata 24451373  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||| | |||||||    
T  24451374 tgtttttagtccctataaaattgagacattttaagtttagtccttacttaattttaatagtttttttagttcttacaaaaatactatgcacttagtatta 24451473  T
Q  236 gtctctgctc 245  Q
    |||| |||||    
T  24451474 gtctatgctc 24451483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 16472783 - 16472991
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||||||||||||    | ||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||         ||  ||||||||    
T  16472783 ccgttagcaaaataggtttttgctgttaattgttactgattgagcaaacggtgaagcacacgtggatgccacatcggacttttttttattgggttaaata 16472882  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||||    
T  16472883 tgtttttagtccctataaatt-gaggcgttttaagtttagtccttacttaattttaatagttgttttagtcgttacaaaaatactatgcactcagaatta 16472981  T
Q  236 gtctctgctc 245  Q
    |||| |||||    
T  16472982 gtctatgctc 16472991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 16477354 - 16477562
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||||||||||||    | ||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||         ||  ||||||||    
T  16477354 ccgttagcaaaataggtttttgctgttaattgttactgattgagcaaacggtgaagcacacgtggatgccacatcggacttttttttattgggttaaata 16477453  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||||    
T  16477454 tgtttttagtccctataaatt-gaggcgttttaagtttagtccttacttaattttaatagttgttttagtcgttacaaaaatactatgcactcagaatta 16477552  T
Q  236 gtctctgctc 245  Q
    |||| |||||    
T  16477553 gtctatgctc 16477562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 59 - 245
Target Start/End: Original strand, 35369005 - 35369189
Alignment:
Q  59 tgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcg 158  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||  ||||||        ||| ||| | |||||||||||||||||||||||| |    
T  35369005 tgttaattgttgctgattgagcaaacagtgaagcacacgtggatgccatgtctgacttttttt-gttgagt-atatatgtttttagtccctataaaattg 35369102  T
Q  159 aggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||    
T  35369103 atgcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcagtagtagtctctgctc 35369189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 13322942 - 13323184
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       |||||||| |||||||||  |  |||||||||||| |||| ||||||| |||||| ||||| ||    
T  13322942 aaattttattaaatttttggtccccaacgtttttttccgttagcgaaataggtcttcactgttaattgttgttgattgagcaaacggtgaaacacacatg 13323041  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||| ||||||||||         ||  |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  13323042 gatgtcacatctgactttttt---tttggttaaatatgtttttagtccctgtaaaattgagacattttaagtttagtccttacttaattttaatagttgt 13323138  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||| ||||||| | |||||||||| ||||||    
T  13323139 tttagtcctaacaaaaattctatgcacttagtattagtccctgctc 13323184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 35864197 - 35863968
Alignment:
Q  1 aaattttattaaatttttggtc-ccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||| ||||||        |||||||||||||||||| || | |||||| |||||||| ||||||| |||||||||||| |     
T  35864197 aaattttattaaatttttggtcgccaacgttttttttcgttagcaaaataggtcctcgctattaattattgctgattgagcaaacggtgaagcacacata 35864098  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    ||||||||||||||          ||  |||||||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  35864097 gatgccacatctgatttttt----tttggttaaatatgtttttagtccatgtaaaattgaggcattttaaatttagtccttacttaattttaatagttgt 35864002  T
Q  200 tttagtcctcacaaaaatactatgcattcagtat 233  Q
    ||||||||| |||||||||||||||| |||||||    
T  35864001 tttagtccttacaaaaatactatgcactcagtat 35863968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 39336875 - 39336992
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  39336875 gttaaatatgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaataattgttttagtccttagaaaaatactatgcatt 39336974  T
Q  228 cagtattagtctctgctc 245  Q
    || |||||||||||||||    
T  39336975 caatattagtctctgctc 39336992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 39 - 238
Target Start/End: Original strand, 36062599 - 36062798
Alignment:
Q  39 ttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaat--at 136  Q
    |||||||||||||||  || ||||||||||||||||| ||||||| |||||||||||| |||||||||||| ||||         ||  |||||||  ||    
T  36062599 ttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacatggatgccacatttgactcttttt--tttggttaaatgtat 36062696  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| | ||||||||    
T  36062697 gtttttagtccatgtaaaattgaggcattttaagtttagtccttactaaattttaatagttgttttagtccttacaaaaatactatgcactaagtattag 36062796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 41280243 - 41280485
Alignment:
Q  1 aaattttattaaatttttggtc-ccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||| ||||||       ||||||||||||||||||  || |||||||| |||||||| ||||||| |||| ||||||| |     
T  41280243 aaattttattaaatttttggtctccaacgtttttttccgttagcaaaataggtcatcgctgttaattattgctgattgagcaaacggtggagcacacata 41280342  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||         ||  |||||||| | ||||||||||  |||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  41280343 gatgccacatctgactttttttttttg-gttaaatacggttttagtcccggtaaaattgaggcattttaagcttagtccttagttaattttaatagttgt 41280441  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgc 243  Q
    ||||||||  ||||||||| |||||| |  ||||||||| ||||    
T  41280442 tttagtccgtacaaaaatagtatgcacttggtattagtccctgc 41280485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 71 - 238
Target Start/End: Original strand, 1737385 - 1737551
Alignment:
Q  71 ctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaag 170  Q
    ||||| |||||||  ||||||||||||||||||| |||||||||        |||  |||||||||||||||||| ||||| |||| ||| |||||||||    
T  1737385 ctgattgagcaaacagtgaagcacacgtggatgctacatctgacttttttt-gttgggttaaatatgtttttagttcctatcaaattgagacattttaag 1737483  T
Q  171 tttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||    
T  1737484 tttagtctttacttaattttaatagttgttttagttcttacaaaaatactatgcactaagtattagtc 1737551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 21575601 - 21575679
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgac 114  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  21575601 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgac 21575679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 37967417 - 37967527
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||||| ||||||||||||| |||   |||||||||||||| ||||||||||||||||||| |||||||||| |  |||| | ||||||||    
T  37967417 gttaaatatgtttttcgtccctataaaattgagatcttttaagtttagtctttacttaattttaatagtttttttagtccttaataaaaaattatgcatt 37967516  T
Q  228 cagtattagtc 238  Q
    |||||||||||    
T  37967517 cagtattagtc 37967527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 17842347 - 17842464
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||| ||||||||||||||||||| ||| | ||  ||||||||||||||| |||||||||||||| ||||||||   ||||||| | |||||| |    
T  17842347 gttaaatatatttttagtccctataaaattgagaccttcaaagtttagtccttacataattttaatagttcttttagtctctacaaaaaaattatgcact 17842446  T
Q  228 cagtattagtctctgctc 245  Q
    ||||||||||||||||||    
T  17842447 cagtattagtctctgctc 17842464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 41590747 - 41590667
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||||| |||||||||| | | | |||||||||||||||||||||||||||||||||| ||||||||||    
T  41590747 gttaaatatgtttttagttcctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttagtcct 41590667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 17842882 - 17842793
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||| ||||||||||||| ||    |||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  17842882 agttaaatatgtttttggtccctataaaattgaaaacttttaagtttagtccttacttaattttaatagtatttttagtccttacaaaaa 17842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 6590148 - 6590227
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | |   |||||||||||||||||||||||||||||||||| |||||||||    
T  6590148 gttaaatatgtttttggtccctataaaattgggatcttttaagtttagtccttacttaattttaatagttcttttagtcc 6590227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 8784460 - 8784539
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||  ||||||||||||  ||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  8784460 gttaaatatgtttttgatccctataaaattcagatattttaagtttagtccttacttaattttaatagttcttttagtcc 8784539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 9252527 - 9252606
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||| ||||||||||||||||||| ||   |||||| |||||||||||||||||||||||||||| |||||||||    
T  9252527 gttaaatatttttttagtccctataaaattgaaatattttatgtttagtccttacttaattttaatagttcttttagtcc 9252606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 32243566 - 32243677
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||| |||||||  |||||||||  | ||||  | |||||| |||||     
T  32243566 atatgttttaggtccctataaaattgagacattttaagtttagtccttacttaattataatagtgtttttagtccatataaaacaattatgcactcagtt 32243665  T
Q  233 ttagtctctgct 244  Q
    ||||||||||||    
T  32243666 ttagtctctgct 32243677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 5250800 - 5250690
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||||| |||||||||||||  || | ||| |||||||||||||| ||||||||||| ||| |||||||||  | ||||| | | ||||||    
T  5250800 gttaaatatgtttttggtccctataaaataaagacctttcaagtttagtccttatttaattttaatggttcttttagtccctaaaaaaaaattctgcatt 5250701  T
Q  228 cagtattagtc 238  Q
    |||||||||||    
T  5250700 cagtattagtc 5250690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 36471234 - 36471124
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    |||||||||| |||| ||||||||||||| |||   ||| |||||||||||||||||||||||||||||| |||||||||  | |||||   | ||||||    
T  36471234 gttaaatatgattttggtccctataaaatagagatctttcaagtttagtccttacttaattttaatagttcttttagtccctaaaaaaaatttctgcatt 36471135  T
Q  228 cagtattagtc 238  Q
    |||||||||||    
T  36471134 cagtattagtc 36471124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 43988563 - 43988485
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||||||||||||| ||||||||||||| ||||  || ||||||||||||||||||||||||||||| | ||||||||    
T  43988563 gttaaatatgtttttggtccctataaaattgaggtcttctaagtttagtccttacttaattttaataggttttttagtc 43988485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 44803474 - 44803396
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||||||||| |||||| ||| | || ||||||||||||||||||||||||||||||| |||| ||||    
T  44803474 ttaaatatgtttttagtccctgtaaaattgagaccttctaagtttagtccttacttaattttaatagttttttttgtcc 44803396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 37967952 - 37967864
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattt-taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| |||||||||||||  ||| | || ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  37967952 gttaaatatgtttttggtccctataaaatt-aggaacttctaagtttagtccttacttaattttaatagtttttttagtccttacaaaaa 37967864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 41590215 - 41590303
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| ||||||||| ||||||||||||| |||   |||||||||||||||||||||||||||||||| | |||||||||  |||||||    
T  41590215 gttaattatgtttttggtccctataaaattgagaacttttaagtttagtccttacttaattttaataggttttttagtccctacaaaaa 41590303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 42950293 - 42950214
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| |   | |||||||||||||||||||||||||||||||||  |||||||||    
T  42950293 gttaaatatgtttttggtccctataaaattgttactttttaagtttagtccttacttaattttaatagtgcttttagtcc 42950214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 10409480 - 10409558
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||||||||||||| |||||| |||||| | | | |||||||||||||||||||||||||||||||||  ||||||||    
T  10409480 gttaaatatgtttttggtccctgtaaaattgggaccttttaagtttagtccttacttaattttaatagtgtttttagtc 10409558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 21160191 - 21160113
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||||||||||||| ||||||||||||| | | ||||||||||||| |||||| ||| ||||||||||| ||||||||    
T  21160191 gttaaatatgttttttgtccctataaaattgggacattttaagtttaatccttatttagttttaatagttcttttagtc 21160113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 30133933 - 30133859
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| |||   |||||||||||||||||||||||||||||||||  |||||||||    
T  30133933 atatgtttttggtccctataaaattgagattttttaagtttagtccttacttaattttaatagtgtttttagtcc 30133859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 2827226 - 2827138
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatc-gaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| |||||||||||||  || || |||||||||||||||||||||||||||||||||  |||||||||  |||||||    
T  2827226 gttaaatatgtttttggtccctataaaatttgaagc-ttttaagtttagtccttacttaattttaatagtctttttagtccctacaaaaa 2827138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 33322435 - 33322495
Alignment:
Q  148 ctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  33322435 ctataaaattgagaccttttaagtttagtccttacttaattttaatagtttttttagtcct 33322495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 1680851 - 1680930
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||| ||||| | | | | |||||||||||||||||||||||||||||||| ||| |||||    
T  1680851 gttaaatatgtttttggtccctaaaaaattgggacctcttaagtttagtccttacttaattttaatagttctttgagtcc 1680930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 14121813 - 14121892
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| || |||||||||| | | | ||| |||||||||||||||||||||||||| ||| |||||||||    
T  14121813 gttaaatatgtttttggttcctataaaatagggacctttcaagtttagtccttacttaattttaatggttcttttagtcc 14121892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 14122155 - 14122076
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||| ||| |||||    
T  14122155 gttaaatatgtttttggtccctataaaataggggtctttcaagtttagtccttacttaattttaatggttctttcagtcc 14122076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 21159724 - 21159811
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||| ||||| ||||||||||||| |||   || ||||||||||||||||||||||||||||| | |||||||||  |||||||    
T  21159724 ttaaatatatttttggtccctataaaattgagaacttctaagtttagtccttacttaattttaataggttttttagtcccaacaaaaa 21159811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 31185887 - 31185812
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    |||||||||||||||  |||||||||||| | | | || ||||||||||||||||||||||||||||||| |||||    
T  31185887 gttaaatatgtttttgatccctataaaattgcgaccttataagtttagtccttacttaattttaatagttttttta 31185812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 36126674 - 36126607
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||| ||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||    
T  36126674 gttaaatatgtgtttggtccctataaaattgagaacttttaagtttagtccttacttaattttaatag 36126607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 16478525 - 16478467
Alignment:
Q  187 ttttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  16478525 ttttaatagttgttttagtccttacaaaaatactatgcactcagtattggtccctgctc 16478467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 44893744 - 44893818
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | |||||| ||||||||||||||||||||||||||  |||||||||    
T  44893744 atatgtttttggtccctataaaattgggaccttttaaatttagtccttacttaattttaatagtgtttttagtcc 44893818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 6590680 - 6590595
Alignment:
Q  130 taaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaa 215  Q
    ||||||| ||||| ||||||||||||| | |   || ||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  6590680 taaatatattttttgtccctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttagtccttacaaaa 6590595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 8784994 - 8784906
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattt-taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| |||||| ||||||  ||| |||| ||||||||||||||||||||||||||||| | |||||||||  |||||||    
T  8784994 gttaaatatgtttttggtccctctaaaatt-aggaatttctaagtttagtccttacttaattttaataggttttttagtccctacaaaaa 8784906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 18840327 - 18840218
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    |||||||||  |||||||||||||||||| ||  | ||| ||||| |||| ||||||||||||||||||| |||||||||  ||||||| |  ||| | |    
T  18840327 gttaaatatagttttagtccctataaaattgaaacttttaaagttaagtctttacttaattttaatagttcttttagtccctacaaaaaaatgatgtact 18840228  T
Q  228 cagtattagt 237  Q
    ||||||||||    
T  18840227 cagtattagt 18840218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 44265329 - 44265410
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||||  |||||||||||| | | | |||||| ||||||| ||||||||||||| ||||| ||||||||||    
T  44265329 agttaaatatgtttttgatccctataaaattgggaccttttaaatttagtctttacttaattttattagttcttttagtcct 44265410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 547418 - 547339
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||| ||||||||| | | | ||| ||||||| |||||||||||||||||||| | |||||||||    
T  547418 gttaaatatgtttttggtctctataaaatagggacctttcaagtttaatccttacttaattttaataggttttttagtcc 547339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 5250265 - 5250344
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| |||| |||||||| | | | ||| ||||||| |||||||||||||||||||| | |||||||||    
T  5250265 gttaaatatgtttttggtccttataaaatagggacctttcaagtttaatccttacttaattttaataggttttttagtcc 5250344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 6244455 - 6244392
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagt 196  Q
    |||| ||||| ||||||||||||| | | | |||||||||||||||||||||||||||||||||    
T  6244455 atatattttttgtccctataaaattgggaccttttaagtttagtccttacttaattttaatagt 6244392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 17498902 - 17498823
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||  || ||||||||| | | | ||||||||||||||||||||||||| |||||||  |||||||||    
T  17498902 gttaaatatgtttttgttctctataaaattgtgactttttaagtttagtccttacttaattctaatagtatttttagtcc 17498823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 25102369 - 25102261
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    |||||||||||||||  |||||||||||| | | | ||| |||||||||| ||||||||||||||| ||| |||||||||| | ||||| | | |||| |    
T  25102369 gttaaatatgtttttgatccctataaaatggggtc-tttcaagtttagtctttacttaattttaatggttcttttagtcctta-aaaaaaaatctgcact 25102272  T
Q  228 cagtattagtc 238  Q
    |||||||||||    
T  25102271 cagtattagtc 25102261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 44802362 - 44802429
Alignment:
Q  131 aaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    |||||||||||||||||||||||||| ||| |||| |||||||||||||||    |||||||||||| ||||    
T  44802362 aaatatgtttttagtccctataaaattgagacattctaagtttagtcctta----attttaatagttttttt 44802429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 44894816 - 44894742
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | |   |||||||||||| ||||||||||||||||||||  |||||||||    
T  44894816 atatgtttttggtccctataaaattgggatcttttaagtttagcccttacttaattttaatagtgcttttagtcc 44894742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 16478605 - 16478528
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgac 114  Q
    |||||||||||||||||| || ||||||| |||| ||||  |||||| |||||||||||| |||||| ||||| ||||    
T  16478605 cgttagcaaaataggtcctcgctgttaatggttgttgattaagcaaacggtgaagcacacatggatgacacatatgac 16478528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 36018002 - 36018066
Alignment:
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    |||||| |||||||| |||| |||  ||||||||||||||||||||||||||||||||||| ||||    
T  36018002 gttttttgtccctatgaaat-gagaaattttaagtttagtccttacttaattttaatagttttttt 36018066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 38706850 - 38706773
Alignment:
Q  130 taaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||| ||||||||||||| | |   ||| |||||||||| ||| ||||||||||||||| |||||||||    
T  38706850 taaatatgtttttggtccctataaaatagggatctttcaagtttagtctttatttaattttaatagttattttagtcc 38706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 40304870 - 40304935
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaata 194  Q
    |||||||||||||| |||| |||||| | ||| | || ||||||||||||||||||||||||||||    
T  40304870 ttaaatatgtttttggtccttataaacttgagaccttctaagtttagtccttacttaattttaata 40304935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 5696320 - 5696245
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||  |||||||||||| |||   ||||||||||||||||||||||||| |||| ||| |||||||    
T  5696320 ttaaatatgtttttgatccctataaaattgagat-ttttaagtttagtccttacttaattataattgtttttttagt 5696245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 25101837 - 25101925
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||| ||||| || | |||||||| ||| | ||| ||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  25101837 gttaaatatatttttggttcttataaaatagagacctttcaagtttaatccttacttaattttaatagattttttagtccctacaaaaa 25101925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 30658329 - 30658393
Alignment:
Q  131 aaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    |||||||||||| ||||||||||||| | |   || |||||||||||||||||||||||||||||    
T  30658329 aaatatgtttttggtccctataaaattgtgaacttctaagtttagtccttacttaattttaatag 30658393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1692644 - 1692719
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgat 75  Q
    |||||||||||||||||||||||| ||||       |||||||| ||||| |||| ||||||||||||||||||||    
T  1692644 aaattttattaaatttttggtccccaacgtttttttccgttagcgaaatatgtcctcgttgttaattgttgctgat 1692719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 12469307 - 12469385
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||||||||||  || ||||||||| |||   ||||||||||| | ||||||| |||||||||||| ||||||||    
T  12469307 gttaaatatgtttttgatctctataaaattgagattttttaagtttaattcttacttgattttaatagtttttttagtc 12469385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 28702063 - 28701997
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaata 194  Q
    ||||||||| |||||  |||||||||||| |||   ||||| |||||||||||||||||||||||||    
T  28702063 gttaaatatatttttgatccctataaaattgagatcttttatgtttagtccttacttaattttaata 28701997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 32244803 - 32244729
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| | ||||||||||| | | | |||||||||||||||||| |||||| |||||||  |||||||||    
T  32244803 atatgttttttgaccctataaaattgggaccttttaagtttagtccttatttaattataatagtgtttttagtcc 32244729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 18304989 - 18304914
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctct 241  Q
    ||||||||||| ||||||||||| |||||||||| ||||| |||| | ||||| | |||||| |||||||||||||||    
T  18304989 ttttaagtttaatccttacttaaatttaatagtt-ttttaatcctta-aaaaaaattatgcactcagtattagtctct 18304914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 33322910 - 33322861
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | |||||||||| |||||||    
T  33322910 taagtttagtccttatttaattttaataggttttttagtccttacaaaaa 33322861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 38706318 - 38706395
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||| ||||||||||||| | |   ||||||||||| || ||||||| ||||||||| | |||||||    
T  38706318 gttaaatatgtttttggtccctataaaatagggatcttttaagtttaatcattacttatttttaataggttttttagt 38706395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 6018414 - 6018374
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  6018414 taagtttagtccttacttaattttaataggttttttagtcc 6018374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 39336808 - 39336873
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatg 103  Q
    ||||||||||||||||||  || ||||||||||||||||| ||||||| |  |||||||| |||||||    
T  39336808 ccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacg--gaagcacatgtggatg 39336873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 27000698 - 27000741
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||||||||||||||||||  | |||||||||    
T  27000698 ttttaagtttagtccttacttaattttaatatcttttttagtcc 27000741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 32513958 - 32514009
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaata 218  Q
    |||||||| |||||||||||||||||||||  |||||||||| | |||||||    
T  32513958 taagtttaatccttacttaattttaatagtctttttagtccttataaaaata 32514009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 44265864 - 44265777
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaa 215  Q
    ||||||||||||||| |||| |||||||| |     || ||||||||||| ||||||||||||||||  | |||||||||| ||||||    
T  44265864 gttaaatatgttttttgtccttataaaattggaaacttctaagtttagtctttacttaattttaataagttttttagtccttacaaaa 44265777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 2821386 - 2821314
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||| ||||||||| ||  | ||||||||||||| | |||||||||||||||||| |||||||||    
T  2821386 atatgttttttgtcactataaaatggaacc-ttttaagtttagttcatacttaattttaatagtt-ttttagtcc 2821314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 5695795 - 5695868
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||| ||||||||||||        ||||||||||| ||||||||||||||||||||   ||||||||||    
T  5695795 gttaaatatgtttttggtccctataaaac-------ttttaagtttaatccttacttaattttaatagggtttttagtcct 5695868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 5765608 - 5765658
Alignment:
Q  145 tccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    |||||||||||| | | | || |||||||||||||||||||||||||||||    
T  5765608 tccctataaaattgcgaccttctaagtttagtccttacttaattttaatag 5765658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 30969069 - 30968991
Alignment:
Q  138 tttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| ||||||||||||| ||    || |||||| ||| |||||||||||||||||||| |||||||||  |||||||    
T  30969069 ttttttgtccctataaaattgaaaacttctaagttcagtacttacttaattttaatagtttttttagtccctacaaaaa 30968991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 42499735 - 42499693
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||    
T  42499735 ttttaaatttagtccttacttaatattaatagtttttttagtc 42499693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 27875360 - 27875409
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| || |||||||||||||||||||| | ||||||||| ||||||||    
T  27875360 taagtgtaatccttacttaattttaatagattttttagtccccacaaaaa 27875409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 28015540 - 28015589
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| || |||||||||||||||||||| | ||||||||| ||||||||    
T  28015540 taagtgtaatccttacttaattttaatagattttttagtccccacaaaaa 28015589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 30658810 - 30658734
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctct 241  Q
    |||||| |||| | |||||||||||||||||||| ||||||| ||  |||||| | |||||| ||||||||| |||||    
T  30658810 ttttaaatttaattcttacttaattttaatagtttttttagttct-tcaaaaaaattatgcactcagtattaatctct 30658734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 42499294 - 42499343
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||| |||||||||||||||||||| | |||||| ||| |||||||    
T  42499294 taagtttaatccttacttaattttaataggttttttagaccttacaaaaa 42499343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 43936431 - 43936480
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||| ||||| |||||||||||||| | |||||||||| |||||||    
T  43936431 taagtttaatccttgcttaattttaataggtcttttagtccttacaaaaa 43936480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 12667052 - 12667024
Alignment:
Q  128 gttaaatatgtttttagtccctataaaat 156  Q
    |||||||||||||||||||||||||||||    
T  12667052 gttaaatatgtttttagtccctataaaat 12667024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 28755585 - 28755497
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| ||||||||  ||||||| ||||| | | | || ||||||||||||||| ||||||||||||| | ||||| || | |||||||    
T  28755585 gttaattatgttttcggtccctacaaaattgcgaccttgtaagtttagtccttatttaattttaatagcttttttaatctttacaaaaa 28755497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 30806251 - 30806303
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||  ||||||||||||||||||| ||||| |||  |||||||    
T  30806251 ttttaagtttagtatttacttaattttaatagtttttttaatccctacaaaaa 30806303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 32514411 - 32514375
Alignment:
Q  171 tttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||||||||||||||  |||||||||    
T  32514411 tttagtccttacttaattttaatagtgcttttagtcc 32514375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 43622667 - 43622755
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| ||| ||||| ||||||||||||| ||    || |||||| ||| |||||||||||||| ||| | |||||||||| |||||||    
T  43622667 gttaattatatttttggtccctataaaattgataacttctaagttgagttcttacttaattttagtaggttttttagtccttacaaaaa 43622755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 43623168 - 43623124
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||| ||||||| ||||||||||||||||||| | ||||||||    
T  43623168 ttttaaatttagtctttacttaattttaatagttctcttagtcct 43623124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 8e-76; HSPs: 85)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 8217274 - 8217511
Alignment:
Q  1 aaattttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgg 100  Q
    ||||||||||||||||||||||||||||       ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  8217274 aaattttattaaatttttggtcccaacgtttttttccgttagcaaaataggtcctcgttgttaattgttgctgattgagcaaacggtgaagcacacgtgg 8217373  T
Q  101 atgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtt 200  Q
    ||| ||||||| ||        ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  8217374 atgtcacatcttacttttttt-gttcagttaaatatgtttttagtccctattaaatcgaggcattttaagtttagtccttgcttaattttaatagttgtt 8217472  T
Q  201 ttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||      ||||||||||||||||||||||||||||||||||    
T  8217473 ttagt------aaaaatactatgcattcagtattagtctctgctc 8217511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 39 - 242
Target Start/End: Original strand, 13919858 - 13920061
Alignment:
Q  39 ttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgt 138  Q
    |||||||||||||||| |  ||||||||||||||||| ||||||| ||||||||| || |||||| ||||||||||        |||  |||||||||||    
T  13919858 ttagcaaaataggtcctcactgttaattgttgctgattgagcaaacggtgaagcatacatggatgtcacatctgacttttttttgttgggttaaatatgt 13919957  T
Q  139 ttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  13919958 ttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcacccagtattagtc 13920057  T
Q  239 tctg 242  Q
    ||||    
T  13920058 tctg 13920061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 34526825 - 34527031
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| ||  ||||||||||||||| ||||||||||        |||  ||||||||    
T  34526825 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacgg--aagcacacgtggatgtcacatctgacttttttctgttg-gttaaata 34526921  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  34526922 tgtttttagtccttataaaattgagccattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcattcaatatta 34527021  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  34527022 gtctctgctc 34527031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 38693940 - 38693730
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnn-gttcagttaaat 134  Q
    ||||||||||||||||||| |  |||||||||||| |||| ||||||| ||||||||||| | ||||||||||||||||         |||  |||||||    
T  38693940 ccgttagcaaaataggtcctcactgttaattgttgttgattgagcaaacggtgaagcacatgcggatgccacatctgactttttttttgttgggttaaat 38693841  T
Q  135 atgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatt 234  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  38693840 atgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcaatatt 38693741  T
Q  235 agtctctgctc 245  Q
    |||||||||||    
T  38693740 agtctctgctc 38693730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 8218537 - 8218292
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||| ||||||||||| ||||       || ||||||||||| |||  |  ||||||||||||||||| ||||||| |||||||||||||||    
T  8218537 aaattttattaagtttttggtccccaacgtttttttccattagcaaaataagtcatcactgttaattgttgctgattgagcaaacggtgaagcacacgtg 8218438  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  8218437 gatgccacatctgacttttttt-gttgagttaaatatgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagtggt 8218339  T
Q  200 tttagtcctcac-aaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| || |||||||||||||| |||||||||||| ||||||    
T  8218338 tttagtccttacaaaaaatactatgcactcagtattagtccctgctc 8218292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 13921190 - 13920954
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| || |       ||||||||||||||||||| || | ||||||||||||||| ||||||| |||||||||||| ||    
T  13921190 aaattttattaaatttttggtccccaatgtttttttccgttagcaaaataggtcctcgctattaattgttgctgattgagcaaacggtgaagcacacatg 13921091  T
Q  100 gatgccacatctgacnnnnnnnn-gttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttg 198  Q
    |||||||||||||||         |||  |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  13921090 gatgccacatctgactttttttttgttgggttaaatatgtttttagtccctttaaaattgaggcattttaagtttagtccttacttaattttaatagttg 13920991  T
Q  199 ttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||| ||||||||| |||||| |||||||||    
T  13920990 ttttagtccttacaaaaatattatgcactcagtatta 13920954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 43441398 - 43441154
Alignment:
Q  1 aaattttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgg 100  Q
    |||||||||||||||||||||||||||        ||||||||||||||| |||     |||||||||||||||| |||||||  || ||||||||||||    
T  43441398 aaattttattaaatttttggtcccaacacttttttccgttagcaaaatagatcctgaccgttaattgttgctgattgagcaaaccgtaaagcacacgtgg 43441299  T
Q  101 atgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtt 200  Q
    ||||||||||||||        |||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  43441298 atgccacatctgacctttttttgttgggttaaatatgtttttagtccctataaaattgaggcattttaattttagtcctttcttaattttaatagttgtt 43441199  T
Q  201 ttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||| | |||||||||||||||| ||||||||||||| |||||    
T  43441198 ttagtctttacaaaaatactatgcactcagtattagtctttgctc 43441154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 26864989 - 26865222
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||| ||||||||||||| ||||       |||||||| |||||||||| || ||||||||||||||||| ||||||| |||||||||||||||    
T  26864989 aaattttattcaatttttggtccccaacgtttttttccgttagcgaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtg 26865088  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||| ||||        |||  ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||    
T  26865089 gatgccacatatgacttttttt-gttgggttaaatatgtttttagtccctataaaagtgagtcattttaagtttagtccttacttaattttaatagttgt 26865187  T
Q  200 tttagtcctcacaaaaatactatgcattcagtatt 234  Q
    ||||||||| ||||||||||||| || ||||||||    
T  26865188 tttagtccttacaaaaatactatccactcagtatt 26865222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 34527638 - 34527409
Alignment:
Q  1 aaattttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgg 100  Q
    |||||||||||||||||||||||||| |       |||||||| |||||||||| || ||||||||||||||||| ||||||| |||||||||||||||     
T  34527638 aaattttattaaatttttggtcccaatgtttttttccgttagcgaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtga 34527539  T
Q  101 atgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtt 200  Q
    ||||||||||||          |||  |||||||||||||||||||||||    || ||||||||||||||||| | |||||||||||||||||||||||    
T  34527538 atgccacatctgg-ttttttttgttgggttaaatatgtttttagtcccta----attgaggcattttaagtttactgcttacttaattttaatagttgtt 34527444  T
Q  201 ttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||| |||||||||||||||| |||||||||    
T  34527443 ttagtccttacaaaaatactatgcactcagtatta 34527409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 26866179 - 26865974
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||||||||| |||  || ||||||||||||||||| ||||||| ||  ||||||||||||||||||||||| ||         ||  ||||||||    
T  26866179 ccgttagcaaaataagtcatcgctgttaattgttgctgattgagcaaacgg--aagcacacgtggatgccacatctaacttttttttattgggttaaata 26866082  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | |||    
T  26866081 tgtttt-agtccctataaaattgaggcattttaagtttagtccttgcttaattttaatagttgttttagtccttacaaaaatactatgcattcaat-tta 26865984  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  26865983 gtctctgctc 26865974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 41138909 - 41139026
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |    
T  41138909 gttaaatatgtttttagtccctgtaaaattgaggcattttaagtttagtctttacttaattttaatagttgttttagtccttacaaaaatactatgcact 41139008  T
Q  228 cagtattagtctctgctc 245  Q
    ||||||||||||||||||    
T  41139009 cagtattagtctctgctc 41139026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 65 - 245
Target Start/End: Original strand, 38691802 - 38691982
Alignment:
Q  65 ttgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcat 164  Q
    ||||||||||| ||||||| |||||||||||  |||||| ||||||||||         ||  |||||||||||||||||| ||| |||||| ||| |||    
T  38691802 ttgttgctgattgagcaaacggtgaagcacatatggatgtcacatctgacttttttttttttggttaaatatgtttttagttcctgtaaaattgagacat 38691901  T
Q  165 tttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  38691902 tttaagtttagtccttacttaattttaatagttgttttagtccttataaaaatactatgcattcagtattagtccctgctc 38691982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 43440007 - 43440249
Alignment:
Q  1 aaattttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgg 100  Q
    |||||||||||||||||||||||| |         ||||||||||||||||||  || ||||||||||||||||| ||||||| |||||||||||| |||    
T  43440007 aaattttattaaatttttggtccccaaccttttttccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacatgg 43440106  T
Q  101 atgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttg-t 199  Q
    ||| || |||| ||         ||  || |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  43440107 atgtcatatctaactttttt---ttttgtcaaatatgtttttagtccctgaaaaattgaggcattttaagtttagtccttacttaattttaatagttgtt 43440203  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||| |||| |||||| ||| |||||||||||||||    
T  43440204 tttagtccttacaagaatattatgcactcactattagtctctgctc 43440249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 233
Target Start/End: Complemental strand, 18951065 - 18950960
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  18951065 gttaaatatgtttttagtccctgtaaaattgaggcattttaagtttagtccttacttaattttaatagttgttttaatccttacaaaaatactatgcact 18950966  T
Q  228 cagtat 233  Q
    ||||||    
T  18950965 cagtat 18950960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 41140024 - 41139937
Alignment:
Q  158 gaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||| | |||||||||||||| |||||||||||| ||||||    
T  41140024 gaggcattttaagtttagtccttccttaattttaatagttgctttagtccttataaaaatactatgcactcagtattagtccctgctc 41139937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 42878020 - 42877940
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||| ||||||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  42878020 gttaaatatgtttttggtccctataaaattgagaccttttaagtttagtccttacttaattttaatagtttttttagtcct 42877940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 21837027 - 21837102
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||| |||||    
T  21837027 gttaaatatgtttttagtccctataaaattgagaccttttaagtttagtccttacttaattttaatagttctttta 21837102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 40158149 - 40158226
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||||||||||||||||| | | | |||||||||||||||||||||||||||||||||| |||||||    
T  40158149 gttaaatatgtttttagtccctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttagt 40158226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 22023476 - 22023399
Alignment:
Q  130 taaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||||||| |||||||||    
T  22023476 taaatatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttagtcc 22023399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 27307704 - 27307783
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | ||| ||| |||||||||||||||||||||||||| ||| |||||||||    
T  27307704 gttaaatatgtttttggtccctataaaataggggcctttcaagtttagtccttacttaattttaatggttcttttagtcc 27307783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 8313094 - 8313203
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    |||||||||||||||  |||||||||||| ||||  ||| |||||||||||||||||||||||||| ||| ||||||||| |  ||||| | | ||||||    
T  8313094 gttaaatatgtttttgatccctataaaatagaggtctttcaagtttagtccttacttaattttaatggttcttttagtcc-ctaaaaaaaaatctgcatt 8313192  T
Q  228 cagtattagtc 238  Q
    |||||||||||    
T  8313193 cagtattagtc 8313203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 17742218 - 17742327
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||||| ||||||||||||| | | | ||||||||||||| |||||||||||||||||||| ||||| |||| | ||||| | | |||| |    
T  17742218 gttaaatatgtttttggtccctataaaattgggaccttttaagtttagttcttacttaattttaatagtttttttattcctta-aaaaaaattctgcact 17742316  T
Q  228 cagtattagtc 238  Q
    |||||||||||    
T  17742317 cagtattagtc 17742327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 10674526 - 10674606
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||| ||||||||||||| | | | || ||||||||||| ||||||||||||||||||| ||||||||||    
T  10674526 gttaaatatgtttttggtccctataaaattgggaccttataagtttagtctttacttaattttaatagttcttttagtcct 10674606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 4462361 - 4462286
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    ||||||||||||||||||||||||||||| | | |  ||||||||||||||||| ||||||||||||||| |||||    
T  4462361 gttaaatatgtttttagtccctataaaattgggaccatttaagtttagtccttaattaattttaatagttctttta 4462286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 10463623 - 10463702
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||| |||||||||    
T  10463623 gttaaatatgtttttggtccctataaaataggggtttttcaagtttagtccttacttaattttaatggttcttttagtcc 10463702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 16966143 - 16966076
Alignment:
Q  126 cagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaat 193  Q
    |||||||||||||||||| |||||||||||| ||   |||||||||||||||||||||||||||||||    
T  16966143 cagttaaatatgtttttaatccctataaaattgaaatattttaagtttagtccttacttaattttaat 16966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 3407295 - 3407221
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||||||  |||||||||    
T  3407295 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaatagtgcttttagtcc 3407221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 8404271 - 8404359
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggca-ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||  ||||||||||||  ||| | |||||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  8404271 gttaaatatgtttttgatccctataaaatt-aggaacttttaagtttagtccttacttaattttaataggttttttagtccttacaaaaa 8404359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 24637351 - 24637262
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||| ||||||||| |||||||| ||| | |||||| |||| |||||||||||||||||| ||| |||||||||  |||||||    
T  24637351 agttaaatatgattttagtccttataaaatggagaccttttaattttaatccttacttaattttaatggttcttttagtccctacaaaaa 24637262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 4462458 - 4462522
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaa 192  Q
    ||||||||||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||    
T  4462458 gttaaatatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaa 4462522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 42853138 - 42853058
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||  ||||| |||||| |||   ||||| |||||||||||||||||||||||||||| ||||||||||    
T  42853138 gttaaatatgtttttgatccctgtaaaattgagatcttttaggtttagtccttacttaattttaatagtttttttagtcct 42853058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 4425905 - 4425984
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | |   ||| |||||||||||||||||||||||||| ||| |||||||||    
T  4425905 gttaaatatgtttttcgtccctataaaatagggatctttcaagtttagtccttacttaattttaatggttcttttagtcc 4425984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 4463177 - 4463110
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||||||||||||||||||||| | |   || |||||||||||||||||||||||||||||    
T  4463177 gttaaatatgtttttagtccctataaaattgggaacttctaagtttagtccttacttaattttaatag 4463110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 28456471 - 28456550
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| |||||||||||||   | | ||||||||||||||  |||||||||||||||||| |||||||||    
T  28456471 gttaaatatgtttttggtccctataaaattaggaccttttaagtttagtcaatacttaattttaatagttattttagtcc 28456550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 30394500 - 30394433
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||||||| ||| ||||||||| | | |||| |||||||||||||||||||||||||||||    
T  30394500 gttaaatatgtttttggtctctataaaattgcgacattctaagtttagtccttacttaattttaatag 30394433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 2004366 - 2004286
Alignment:
Q  130 taaatatgtttttagtccctataaaatcgaggc---attttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||| ||||||||||||| | |     ||||||||||||||||||||||||||||||||| |||||||||||    
T  2004366 taaatatgtttttggtccctataaaattgggaactaattttaagtttagtccttacttaattttaataggtgttttagtcc 2004286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 8336726 - 8336804
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||||||||||||| |||| |||||||| | ||| |||||||||||||||||| |||||||||||  || ||||||||    
T  8336726 gttaaatatgtttttggtccttataaaataggggccttttaagtttagtccttatttaattttaatgattcttttagtc 8336804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 19332351 - 19332425
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | ||||||||||||||||||||||||||||||| |  |||||||||    
T  19332351 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaataatgtttttagtcc 19332425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 40272346 - 40272451
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||| ||||||||||||| | | | |||||| |||||||||||||||||| |||||||  |||||||||  | ||||| | |||||| |||||     
T  40272346 atatgttttttgtccctataaaattgggaccttttaaatttagtccttacttaattataatagtgtttttagtccatataaaaaaattatgcactcagtt 40272445  T
Q  233 ttagtc 238  Q
    ||||||    
T  40272446 ttagtc 40272451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 17742745 - 17742657
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| || |||||||||| | |   || ||||||||||| ||||||||||||||||| | |||||||||| |||||||    
T  17742745 gttaaatatgtttttggttcctataaaattgggaacttctaagtttagtctttacttaattttaataggttttttagtccttacaaaaa 17742657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 8404809 - 8404735
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    |||||||||||||||  | |||||||||| ||| | ||||||||||| || ||||||||||||||||||| ||||    
T  8404809 gttaaatatgtttttgattcctataaaattgagaccttttaagtttaatctttacttaattttaatagttttttt 8404735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 32510567 - 32510477
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaata 218  Q
    ||||||||||||||| |||||||||||||   |   || || ||||| |||||||||||||||||||||| |||||||||| | |||||||    
T  32510567 gttaaatatgtttttggtccctataaaatttggaacttctatgtttaatccttacttaattttaatagtttttttagtccttataaaaata 32510477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 37812172 - 37812230
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaatttta 191  Q
    |||||||||| ||||||||||||| | | | ||||||||||||||||||||||||||||    
T  37812172 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaatttta 37812230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 43211034 - 43210972
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||  |||||||||||| | | | ||||||||||||||||||||||||||||||||    
T  43211034 atatgtttttgatccctataaaattgggaccttttaagtttagtccttacttaattttaatag 43210972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 3548755 - 3548643
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||| ||||| |||||||||| || ||| |  | ||||||||| |||| |||||||||||||||| |||||||||| | ||||| | | ||||||    
T  3548755 gttaaatatttttttggtccctataatattgagaccctctaagtttagcccttgcttaattttaatagttcttttagtccttataaaaaaaat-tgcatt 3548657  T
Q  228 cagtattagtctct 241  Q
    || | |||||||||    
T  3548656 caattttagtctct 3548643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 8313626 - 8313561
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaat 193  Q
    ||||||||||||||| ||||||||||||| | | | ||| ||||||| ||||||||||||||||||    
T  8313626 gttaaatatgtttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaat 8313561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 9687915 - 9687838
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    |||||||||| |||| ||||||||||||| |   | ||||||||||| | |||||||||||||||||||| |||||||    
T  9687915 gttaaatatgattttggtccctataaaattggaaccttttaagtttaatacttacttaattttaatagttcttttagt 9687838  T

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Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41140158 - 41140052
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| || |       ||||||||||||||||| | |  ||||||||||||||||| |||||||  ||||| ||||| ||    
T  41140158 aaattttattaaatttttggtccccaatgtttttttccgttagcaaaataggttcccactgttaattgttgctgattgagcaaacagtgaaccacacatg 41140059  T
Q  100 gatgcca 106  Q
    |||||||    
T  41140058 gatgcca 41140052  T

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Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 41193388 - 41193275
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt-cctcacaaaaatactatgcat 226  Q
    |||||||||||||||  |||||||||||| | |  |||| ||||||| || ||| ||||||||||||||| ||||||| ||| | ||||| | ||||||     
T  41193388 gttaaatatgtttttgatccctataaaattgggatatttcaagtttattcgttatttaattttaatagttcttttagtccctaaaaaaaaaattatgcac 41193289  T
Q  227 tcagtattagtctc 240  Q
    ||| ||||||||||    
T  41193288 tcaatattagtctc 41193275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 42877492 - 42877578
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||| ||||||| |  | |  |||||||||||| ||||||||||||||||| | |||||||||| |||||||    
T  42877492 gttaaatatgtttttggtcccaataaaattg--gaaaattaagtttagtcattacttaattttaatagattttttagtccttacaaaaa 42877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 43538478 - 43538551
Alignment:
Q  134 tatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||| ||||||||||||| |   ||||||||||||| |  ||||||||||||||||||| |||||||||    
T  43538478 tatgtttttggtccctataaaattggaacattttaagtttaattattacttaattttaatagttcttttagtcc 43538551  T

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Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 4461840 - 4461928
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | |   || || |||||||||||||||||| ||||||| | |||||||||  |||||||    
T  4461840 gttaaatatgtttttggtccctataaaattgggaacttctatgtttagtccttacttaatattaatagcttttttagtccctacaaaaa 4461928  T

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Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 9687408 - 9687496
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| |     || |||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  9687408 gttaaatatgtttttggtccctataaaattggcaacttctaagtttaatccttacttaattttaataggttttttagtccctacaaaaa 9687496  T

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Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 30403529 - 30403453
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttag 204  Q
    ||||||||||||||| |||||| |||||| | | | |||| |||||||| ||||||||||| |||||||| ||||||    
T  30403529 gttaaatatgtttttggtccctgtaaaattgcgaccttttcagtttagttcttacttaattataatagtttttttag 30403453  T

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Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 622037 - 621958
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||| | ||| ||||||||| | | | ||| ||||||| | |||||||||||||||||||| |||||||||    
T  622037 gttaaatatgtttctggtctctataaaattgggacctttcaagtttaatacttacttaattttaatagttcttttagtcc 621958  T

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Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 1683574 - 1683495
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||  ||| |||||||| |||   ||||||||||| | |||||||||||| ||||||| |||||||||    
T  1683574 gttaaatatgtttttgatccttataaaattgagatcttttaagtttaattcttacttaatttcaatagttcttttagtcc 1683495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 10464155 - 10464088
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaata 194  Q
    |||||||||||||||| ||||| ||||||| | | | ||| ||||||| |||||||||||||||||||    
T  10464155 agttaaatatgtttttggtccccataaaatagggacctttcaagtttaatccttacttaattttaata 10464088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 19333364 - 19333301
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagt 196  Q
    |||||||||| |||||| |||||| | | | ||||||||||||||||||||||||||| |||||    
T  19333364 atatgtttttggtccctgtaaaattgggaccttttaagtttagtccttacttaatttttatagt 19333301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 22166751 - 22166818
Alignment:
Q  130 taaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    ||||||||||||| ||||||||||||||  |    ||||||||||||||||||| |||||||||||||    
T  22166751 taaatatgtttttggtccctataaaatccggaagctttaagtttagtccttactaaattttaatagtt 22166818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 2005438 - 2005376
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    |||||||||| ||||||||||||| | | | || ||||||||||| |||||||||||||||||    
T  2005438 atatgtttttggtccctataaaattgtgaccttctaagtttagtcgttacttaattttaatag 2005376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 2263197 - 2263123
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | |   | |||||||||||| ||||||||||||||||||  |||||||||    
T  2263197 atatgtttttggtccctataaaattgggatctcttaagtttagtctttacttaattttaatagtgtttttagtcc 2263123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 6365213 - 6365251
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  6365213 taagtttagtccttacttaattttaatagtttttttagt 6365251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 28237369 - 28237291
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||||||||||||| ||| | ||||||| | |   ||| ||||||| |||||||||||||||||||||| ||||||||    
T  28237369 gttaaatatgtttttggtctcaataaaatagggatctttcaagtttaatccttacttaattttaatagttcttttagtc 28237291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 30734216 - 30734158
Alignment:
Q  149 tataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||| | ||| |||||| ||||||||| ||||||||||||||||| |||||||||    
T  30734216 tataaaattggggccttttaaatttagtcctgacttaattttaatagtttttttagtcc 30734158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 34010340 - 34010274
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaata 194  Q
    ||||||||||||||| ||||||||||||| | |   || |||||||||||||| |||||||||||||    
T  34010340 gttaaatatgtttttggtccctataaaattgggaacttctaagtttagtccttgcttaattttaata 34010274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 37446783 - 37446745
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgtttt 202  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  37446783 ttttaagtttagtccttacttaattttaatagttttttt 37446745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 30394003 - 30394052
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||||| ||||| |||| |||||||    
T  30394003 taagtttagtccttatttaattttaatagtttttttaatccttacaaaaa 30394052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 34785127 - 34785204
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    |||||||||||| ||||||||||||||||   |   |  ||||||||||||||||||||||||||||| | |||||||    
T  34785127 gttaaatatgttcttagtccctataaaattacgaactactaagtttagtccttacttaattttaataggttttttagt 34785204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 40158678 - 40158594
Alignment:
Q  132 aatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||| ||||||||||||| | |   || ||||||||||||||| ||||||||||||| | ||||| |||  |||||||    
T  40158678 aatatgtttttggtccctataaaattgggaacttctaagtttagtccttagttaattttaataggttttttactccctacaaaaa 40158594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 2003836 - 2003915
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||| ||| ||||| || |||||||||| | | | ||||||||||||  |||| ||||||||||||||| |||||||||    
T  2003836 gttaattatttttttggttcctataaaattgggaccttttaagtttagatcttatttaattttaatagtttttttagtcc 2003915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 4426439 - 4426352
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||  | |||| ||||| |||   ||| ||||||| |||||||||||||||||| ||| |||||||||  |||||||    
T  4426439 ttaaatatgtttttgattcctacaaaatagagatctttcaagtttaatccttacttaattttaatggttcttttagtccctacaaaaa 4426352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 8337259 - 8337172
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||| ||||||||||||||||| || | | | ||||||||||| || ||| ||||||||||||  |  ||||||||| |||||||    
T  8337259 ttaaataggtttttagtccctataagatagggactttttaagtttaatctttatttaattttaataaattgtttagtccttacaaaaa 8337172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 21837357 - 21837290
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||||||| ||||||||| |||  ||   || ||| |||||||||||||||||||||||||    
T  21837357 gttaaatatgtttttggtccctatagaatatagaacttctaaatttagtccttacttaattttaatag 21837290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 27280065 - 27280144
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||| ||||| ||| |||||||||  ||  |||| ||||||||||||  |||||||||||||| | |||||||||    
T  27280065 gttaaatatttttttggtctctataaaattaagatatttaaagtttagtcctcccttaattttaataggttttttagtcc 27280144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 27335514 - 27335589
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    ||||||||||||||| ||||||||||| |   | | ||||||||||||| ||| |||||||||| ||||| |||||    
T  27335514 gttaaatatgtttttggtccctataaatttcggaccttttaagtttagttcttccttaattttattagttttttta 27335589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 28615905 - 28615983
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||||| ||||| ||| ||||||||| |||   || ||||||| ||| ||||||||||||||||||| ||||||||    
T  28615905 agttaaatatatttttggtctctataaaattgagaatttctaagttttgtc-ttacttaattttaatagtttttttagtc 28615983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 14049633 - 14049707
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    ||||||||||||||| |  |||||||||| ||    ||||||||||| | |||||||||||||||||||| ||||    
T  14049633 gttaaatatgtttttggatcctataaaattgaaaatttttaagtttaattcttacttaattttaatagttttttt 14049707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 15875548 - 15875598
Alignment:
Q  147 cctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    |||||||||||||  ||||||||||||| |  |||||||||||||||||||    
T  15875548 cctataaaatcgaaacattttaagtttaatttttacttaattttaatagtt 15875598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 31211608 - 31211530
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||||||||||||| |||  |||||||| |||   |||||| ||| || || ||||||||||||||||| ||||||||    
T  31211608 gttaaatatgtttttggtcattataaaattgagaacttttaaatttggttctaacttaattttaatagtttttttagtc 31211530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 35529828 - 35529778
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtcc 178  Q
    ||||||||||||||||||||||||||||||  | | ||| |||||||||||    
T  35529828 gttaaatatgtttttagtccctataaaatcacgacgtttcaagtttagtcc 35529778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 14050110 - 14050069
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    |||||||||| ||| ||||||||||||||||||| |||||||    
T  14050110 ttttaagtttggtcattacttaattttaatagttcttttagt 14050069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 37103410 - 37103361
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  37103410 taagtttaatccttacttaattttaataggttttttagtccctacaaaaa 37103361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 41138822 - 41138895
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacat 109  Q
    ||||||||||||||||||   | |||||||||||| ||||  | |||| |||||| ||||| ||||||||||||    
T  41138822 ccgttagcaaaataggtcattgctgttaattgttgttgattaatcaaacggtgaaccacacatggatgccacat 41138895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 22023013 - 22023041
Alignment:
Q  167 taagtttagtccttacttaattttaatag 195  Q
    |||||||||||||||||||||||||||||    
T  22023013 taagtttagtccttacttaattttaatag 22023041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 42645266 - 42645234
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagt 196  Q
    ||||||||||| |||||||||||||||||||||    
T  42645266 ttttaagtttaatccttacttaattttaatagt 42645234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 38881 - 38673
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || |||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||        |||  ||||||||    
T  38881 ccgttagcaaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttt-gttgggttaaata 38783  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38782 tgtttttagtccctataaaatcgaggcattttaagtttagtcattatttaattttaatagttgttttagtcctcacaaaaatattatgcattcagtatta 38683  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  38682 gtctctgctc 38673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 35075 - 35269
Alignment:
Q  43 caaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgttttt 142  Q
    |||||||||||| || ||||||||||||||||| || ||||  |||||||||||||||||||||||||||||        ||| | ||||||||||||||    
T  35075 caaaataggtcctcgctgttaattgttgctgattgaacaaacagtgaagcacacgtggatgccacatctgacttttttt-gttgatttaaatatgttttt 35173  T
Q  143 agtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    | |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  35174 aatccctataaaattgaggcattttaagtttagttcttacttaattttaatagttgttttagtccttacaaaaatactatgcactcagtattagtc 35269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 5e-74; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 37329933 - 37329696
Alignment:
Q  3 attttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgga 101  Q
    ||||| |||||||||||||||| ||||       ||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||||    
T  37329933 attttgttaaatttttggtccccaacgtttttttccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtgga 37329834  T
Q  102 tgccacatctgacnnnnnnnn-gttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtt 200  Q
    |||||||||||||         |||  |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37329833 tgccacatctgactttttttttgttgggttaaatatgtttttagtacctataaaatcgaggcattttaagtttagtctttacttaattttaatagttgtt 37329734  T
Q  201 ttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37329733 ttagtcctcacaaaaatactatgcattcagtattagtc 37329696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 25423221 - 25422985
Alignment:
Q  1 aaattttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgg 100  Q
    ||||||||||||||||||||||||||||       ||||||||||||||||||| || |||||||||||| |||| |||||||  |||||||| || |||    
T  25423221 aaattttattaaatttttggtcccaacgtttttttccgttagcaaaataggtcctcgctgttaattgttgatgattgagcaaacagtgaagcatacatgg 25423122  T
Q  101 atgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtt 200  Q
    ||||||||||||||         |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25423121 atgccacatctgacttcttttt-ttcagttaaatatgtttttagtccctgtaaaattgaggcattttaagtttagtccttacttaattttaatagttgtt 25423023  T
Q  201 ttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||||||| | |||||||||||||| |||||| |||||    
T  25423022 ttagtccttaaaaaaatactatgcactcagtactagtc 25422985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 53572029 - 53571823
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || ||||||||||||||| | ||||||| ||  ||||||| ||||||||||||||||||        |||  ||||||||    
T  53572029 ccgttagcaaaataggtcctcgctgttaattgttgctgtttgagcaaacgg--aagcacatgtggatgccacatctgacttttttt-gttgggttaaata 53571933  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  53571932 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcattcaatatta 53571833  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  53571832 gtctctgctc 53571823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 25244104 - 25243896
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||| ||| || ||||||||||||||||| |||||||  |||||||| || |||||||||||||||||        ||| |||||||||    
T  25244104 ccgttagcaaaatagatcctcgctgttaattgttgctgattgagcaaacagtgaagcatacatggatgccacatctgacttttttt-gttgagttaaata 25244006  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||||| |||||||||    
T  25244005 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttattagttttttttgtccttacaaaaatactatgcactcagtatta 25243906  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  25243905 gtctctgctc 25243896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 33689790 - 33689587
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    ||||| |||||||||| | || ||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||         ||  |||||||||    
T  33689790 cgttaacaaaataggtactcgctgttaattgttgctgattgagcaaacgatgaagcacacgtggatgccacatctgactttt-----tttggttaaatat 33689696  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  33689695 gtttttagtccctgtaaaattgaggcattttaagtttaatccttacttaattttaatagttgttttaatccttacaaaaatactatgcactcagtattag 33689596  T
Q  237 tctctgctc 245  Q
    |||||||||    
T  33689595 tctctgctc 33689587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 36 - 242
Target Start/End: Original strand, 31316332 - 31316538
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnn-gttcagttaaat 134  Q
    ||||||| ||||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||         |||  |||||||    
T  31316332 ccgttagtaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctaactttttttttgttgggttaaat 31316431  T
Q  135 atgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatt 234  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||||||    
T  31316432 atgtttttagtcc-tataaaattgaggcattttaagtttagtccttacttaattttaataattgttttagtccttacaaaaataccatgcactcagtatt 31316530  T
Q  235 agtctctg 242  Q
    ||||||||    
T  31316531 agtctctg 31316538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 37 - 241
Target Start/End: Original strand, 25421859 - 25422064
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnn-gttcagttaaata 135  Q
    |||||| ||||||||||  |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||         |||  ||||||||    
T  25421859 cgttagtaaaataggtcatcgttgttaattgttactgattgagcaaacggtgaagcacacgtggatgccacatctgaccttttttttgttgggttaaata 25421958  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||| ||||||||| | |||||||    
T  25421959 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaacagttgtttcagtccttacaaaagtactatgcacttagtatta 25422058  T
Q  236 gtctct 241  Q
    ||||||    
T  25422059 gtctct 25422064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 11671136 - 11670928
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||| |||||||||| || |||||||||||| |||| ||||||| |||||||||||||| |||| ||||||| ||        |||  |||||||     
T  11671136 ccgttagcgaaataggtcctcgctgttaattgttgatgattgagcaaacggtgaagcacacgtagatgtcacatctcacttttttt-gttgggttaaatt 11671038  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  11671037 tgtttttagtccctataaaattaaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcagtatta 11670938  T
Q  236 gtctctgctc 245  Q
    |||| |||||    
T  11670937 gtctttgctc 11670928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 53568911 - 53569156
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| |||        |||||||| |||||||||  || ||||||||||||||||| |||||||  ||||||||||||||    
T  53568911 aaattttattaaatttttggtccccaacattttttcccgttagcgaaataggtcatcgctgttaattgttgctgattgagcaaacagtgaagcacacgtg 53569010  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    ||||| |||||||||        |||  |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  53569011 gatgcaacatctgacttttttt-gttgggttaaatatgtttttagttcctataaaattgagacattttaagtttagtccttacttaattttaatagttgt 53569109  T
Q  200 tttagtcctcac-aaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| || |||||||||||||| ||||||||||||| |||||    
T  53569110 tttagtccttacaaaaaatactatgcactcagtattagtctttgctc 53569156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 11669914 - 11670120
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || |||||||||||| |||| ||||||| ||  ||||||  |||||||||||||||||         |||  ||||||||    
T  11669914 ccgttagcaaaataggtcctcgctgttaattgttgttgattgagcaaacgg--aagcacgtgtggatgccacatctga-ttttttttgttgggttaaata 11670010  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  11670011 tgtttttaatccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcattcaatatta 11670110  T
Q  236 gtctctgctc 245  Q
    || |||||||    
T  11670111 gtatctgctc 11670120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 31470756 - 31470963
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| ||  |||||||| | |||||||||||||||        |||   |||||||    
T  31470756 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacgg--aagcacacatagatgccacatctgacttttttttgttggattaaata 31470853  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  31470854 tgtttttagtccctataaaattgagacattttaagtttagtcattacttaattttaatagttgttttagtccttacaaaaatactatacattcaatatta 31470953  T
Q  236 gtctctgctc 245  Q
    ||| ||||||    
T  31470954 gtccctgctc 31470963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 238
Target Start/End: Original strand, 53570801 - 53571002
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||| ||||| |||| || |||||||||||| |||| ||||||| ||| ||||||||||||||||||||||| ||        |||  ||||||||    
T  53570801 ccgttagcgaaatatgtcctcgctgttaattgttgttgattgagcaaacggtcaagcacacgtggatgccacatctaacttttttt-gttgggttaaata 53570899  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  |||||    
T  53570900 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactctttatta 53570999  T
Q  236 gtc 238  Q
    |||    
T  53571000 gtc 53571002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 37 - 245
Target Start/End: Original strand, 10321489 - 10321696
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    ||||||||||||||||||    | |||||||||||||||  |||||| |||||| ||||| |||||||||||| ||||         ||  |||||||||    
T  10321489 cgttagcaaaataggtccctcctattaattgttgctgattaagcaaacggtgaaccacacatggatgccacat-tgactttttttttttttgttaaatat 10321587  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  10321588 gtttttagtccctgtaaaattgaggcattttaagtttagtccttactcaattttaatagttgttttagtccttacaaaaatactatgcactcagtattag 10321687  T
Q  237 tctctgctc 245  Q
    |||||||||    
T  10321688 tctctgctc 10321696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 38 - 241
Target Start/End: Complemental strand, 44209982 - 44209780
Alignment:
Q  38 gttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatg 137  Q
    ||||| ||||||||||| || |||||||||||| |||| ||||||| |||||||||||||| |||| ||||||||||        |||   |||||||||    
T  44209982 gttagtaaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtagatgtcacatctgacttttttt-gttggcttaaatatg 44209884  T
Q  138 tttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagt 237  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||  |||||| |||| |||||||||||||||| |||||||||||    
T  44209883 tttttagtctctataaaattgaggcattttaagtttagtccttacttaattttaatagcagttttattccttacaaaaatactatgcactcagtattagt 44209784  T
Q  238 ctct 241  Q
    ||||    
T  44209783 ctct 44209780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 33688433 - 33688677
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       ||||||||||||||||||| |  ||||||||||||||||| ||||||  |||||||||||  ||    
T  33688433 aaattttattaaatttttggtccccaacgtttttttccgttagcaaaataggtcctcagtgttaattgttgctgattgagcaaccggtgaagcacatatg 33688532  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaag-tttagtccttacttaattttaatagttg 198  Q
    |||| ||||||||||         ||  |||||||| ||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  33688533 gatgtcacatctgacttttttt--tttggttaaatacgtttttagtccctgtaaaattgaggcattttaaggtttaatccttacttaattttaatagttg 33688630  T
Q  199 ttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||||||| ||||||||| |||||| |||||||||||| ||||||    
T  33688631 ttttagtccttacaaaaatattatgcactcagtattagtccctgctc 33688677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 44208633 - 44208876
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       ||||||||||||||||||  || |||||||||||| |||| |||||||  |||||||  || ||    
T  44208633 aaattttattaaatttttggtccccaacgtttttttccgttagcaaaataggtcatcgctgttaattgttgttgattgagcaaacagtgaagcgtacatg 44208732  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||         ||  |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  44208733 gatgccacatctgacttttttt--tttggttaaatatgtttttagtccctgtaaaattgaggcattttaagtttagtccttacttatttttaatagttgt 44208830  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| ||||||||| |||||| ||| ||| |||| ||||||    
T  44208831 tttagtccttacaaaaatattatgcactcaatatcagtccctgctc 44208876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 31318092 - 31317850
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       || |||||||||||||||  || |||||||||||| |||| |||||||    ||||||||| ||    
T  31318092 aaattttattaaatttttggtccccaacgtttttttccattagcaaaataggtcatcgctgttaattgttgttgattgagcaaacaacgaagcacacatg 31317993  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  31317992 gatgccacatctgactttttt--gttg-gttaaatatgtttttagtccctaaaaaattgaggcattttaagtttagtccttacttaattctaatcgttgt 31317896  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||| ||||| |||||||||||||||| | |||||||||| ||||||    
T  31317895 ttttgtccttacaaaaatactatgcacttagtattagtccctgctc 31317850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 39 - 245
Target Start/End: Complemental strand, 10322816 - 10322611
Alignment:
Q  39 ttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgt 138  Q
    |||||||||||||||| || |||||||||||||||||  ||||||  ||||| ||||| |||||||||||| ||||         ||  |||||||||||    
T  10322816 ttagcaaaataggtccacgctgttaattgttgctgattaagcaaacagtgaaccacacatggatgccacat-tgacttttttttttttggttaaatatgt 10322718  T
Q  139 ttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||||||| |||||| |||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  10322717 ttttagtccctgtaaaattgaggtattttacgtttagtccttacttaattataatagttgttttagtccttacaaaactactatgcactcagtattagtc 10322618  T
Q  239 tctgctc 245  Q
     ||||||    
T  10322617 cctgctc 10322611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 77 - 245
Target Start/End: Complemental strand, 35061285 - 35061119
Alignment:
Q  77 gagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagt 176  Q
    ||||||| ||||||||||||||| | ||||||||||||        |||  ||||||||||||||||| ||||||||||| ||||||||| |||||| ||    
T  35061285 gagcaaacggtgaagcacacgtgta-gccacatctgacttttttttgttgggttaaatatgtttttagcccctataaaattgaggcattt-aagtttggt 35061188  T
Q  177 ccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    | | |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  35061187 cgtgacttaattttaatagttgttttagtccttacaaaaatactatgcactcagtattagtatctgctc 35061119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 192
Target Start/End: Original strand, 15562724 - 15562877
Alignment:
Q  38 gttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatg 137  Q
    |||||| |||||||||| || ||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||        |||  |||||||||     
T  15562724 gttagcgaaataggtcctcgctgttaattgttgctgattgagcaaacggtaaagcacacgttgatgccacatctgac-tttttttgttgggttaaatatt 15562822  T
Q  138 tttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaa 192  Q
    |||||||||| |||||||| |||| |||||| |||||||||||||||||||||||    
T  15562823 tttttagtccgtataaaattgaggtattttatgtttagtccttacttaattttaa 15562877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 23473891 - 23473822
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  23473891 gttaaatatgtttttagtccctataaaatcgagacttttgaagtttagtccttacttaattttaatagtt 23473822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 10085370 - 10085449
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||| ||||| |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  10085370 gttatatatgattttagtccctataaaattgagaccttttaagtttagtccttacttaattttaatagtttttttagtcc 10085449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 47463304 - 47463409
Alignment:
Q  132 aatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagt 231  Q
    |||||||||||  ||||||||||||  || |||||||||||||||||||| ||||||||||||||| ||||||||| |  ||||| | ||||||||||||    
T  47463304 aatatgtttttgatccctataaaattaagacattttaagtttagtccttatttaattttaatagttcttttagtcc-ctaaaaaaaattatgcattcagt 47463402  T
Q  232 attagtc 238  Q
    |||||||    
T  47463403 attagtc 47463409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 19522595 - 19522674
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| ||||  ||| |||||||||||||||||||||||||| ||| |||||||||    
T  19522595 gttaaatatgtttttggtccctataaaatagaggtttttcaagtttagtccttacttaattttaatggttcttttagtcc 19522674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 20650805 - 20650727
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||||||||||   ||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  20650805 gttaaatatgtttttgtaccctataaaattgaaacattttaagtttagtccttacttaattttaatagtttttttagtc 20650727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 3862365 - 3862453
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||| |||| |||||||| ||| | ||||||||||| |||||||||||||||||||||| |||||||||  |||||||    
T  3862365 agttaaatatgttttttgtccttataaaatagagaccttttaagtttaatccttacttaattttaatagtt-ttttagtccctacaaaaa 3862453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 3871122 - 3871210
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||| |||| |||||||| ||| | ||||||||||| |||||||||||||||||||||| |||||||||  |||||||    
T  3871122 agttaaatatgttttttgtccttataaaatagagaccttttaagtttaatccttacttaattttaatagtt-ttttagtccctacaaaaa 3871210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 3872922 - 3873010
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | | | ||||||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  3872922 gttaaatatgtttttggtccctataaaatagggaccttttaagtttaatccttacttaattttaataggttttttagtccctacaaaaa 3873010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 19523131 - 19523052
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | | | ||| |||||||||||||||||||||||||| ||| |||||||||    
T  19523131 gttaaatatgtttttggtccctataaaatagggacctttcaagtttagtccttacttaattttaatggttcttttagtcc 19523052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 22067982 - 22068061
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||| ||||| ||||||||||||| ||  | || ||||||||||||||||||||||||||||||| |||||||||    
T  22067982 gttaaatatatttttggtccctataaaattgataccttataagtttagtccttacttaattttaatagttcttttagtcc 22068061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 51396024 - 51395913
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttag-tcctcacaaaaatactatgcat 226  Q
    |||||||||||||||| |||||||||||| | | | |||||||||||||||||| |||||||||||| || |||||| |||| | ||||| | | ||||     
T  51396024 gttaaatatgtttttaatccctataaaattgggaccttttaagtttagtccttatttaattttaataattcttttagttcctaaaaaaaaaaatctgcac 51395925  T
Q  227 tcagtattagtc 238  Q
    ||||||||||||    
T  51395924 tcagtattagtc 51395913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 13508756 - 13508830
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||||||  |||||||||    
T  13508756 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaatagtgcttttagtcc 13508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 48738397 - 48738471
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| |||   |||||||||||||||||||||||||||||||||  |||||||||    
T  48738397 atatgtttttggtccctataaaattgagatcttttaagtttagtccttacttaattttaatagtgcttttagtcc 48738471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 28448798 - 28448717
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaatttt-aatagttgttttagtcct 208  Q
    ||||||||||||||| ||||||||||||| | | | ||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  28448798 gttaaatatgttttttgtccctataaaattgggacctttcaagtttagtccttacttaattttaaatagtttttttagtcct 28448717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 47379587 - 47379511
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttag 204  Q
    ||||||||||||||| ||||| ||||||||| | | || ||||||||| ||||||||||||||||||||| ||||||    
T  47379587 gttaaatatgtttttggtcccaataaaatcgggaccttctaagtttagcccttacttaattttaatagtttttttag 47379511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 4849977 - 4850056
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||  |||||||||||| ||| | ||||||||||| ||||| |||||||| ||||||| |||||||||    
T  4849977 gttaaatatgtttttgatccctataaaattgagaccttttaagtttaatccttgcttaatttaaatagttcttttagtcc 4850056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 52948172 - 52948093
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| |||||||||||||  ||   ||||||| |||||||||||||||||||||||| | |||||||||    
T  52948172 gttaaatatgtttttggtccctataaaattaagatcttttaagattagtccttacttaattttaataggttttttagtcc 52948093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 53423970 - 53423895
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttag 204  Q
    |||||||||||||| ||| ||||||||| |||  |||||| ||||||| |||||||||||||||||||| ||||||    
T  53423970 ttaaatatgtttttggtctctataaaattgagatattttatgtttagttcttacttaattttaatagttattttag 53423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 35054942 - 35055053
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       || |||||||||||||||  ||||||||| ||||| |||| ||||||| |||||| ||||| ||    
T  35054942 aaattttattaaatttttggtccccaacgtttttttccattagcaaaataggtcatcgttgttaactgttgttgattgagcaaacggtgaaacacacatg 35055041  T
Q  100 gatgccacatct 111  Q
     |||||||||||    
T  35055042 tatgccacatct 35055053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 7491109 - 7491021
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||||||||||||||||  ||   ||  ||||||| || ||||||||||||||||| | |||||||||| |||||||    
T  7491109 gttaaatatgtttttagtccctataaaattaagaatttcaaagtttattctttacttaattttaataggttttttagtccttacaaaaa 7491021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 7617295 - 7617383
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||  ||| |||||||| |||  |||| ||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  7617295 gttaaatatgtttttgatccatataaaatagagatatttcaagtttaatccttacttaattttaatagattttttagtccctacaaaaa 7617383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 30331690 - 30331611
Alignment:
Q  129 ttaaatatgtttttagtccctat--aaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||||||||| ||||||||  ||||| | | | ||||||||| |||||||||||||||||||||||| ||||||||    
T  30331690 ttaaatatgtttttggtccctatttaaaatagggaccttttaagttcagtccttacttaattttaatagtttttttagtc 30331611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 7617727 - 7617652
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    ||||||||| |||||  ||||||||||||   ||| |||||||||||||||||||||||||||||| ||| |||||    
T  7617727 gttaaatatatttttgatccctataaaatatgggccttttaagtttagtccttacttaattttaatggttctttta 7617652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 47379055 - 47379134
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||| | ||||||||||||  | |   || ||||||||||||||||||||||||||||||| |||||||||    
T  47379055 gttaaatatgtttctggtccctataaaactgggaacttctaagtttagtccttacttaattttaatagtttttttagtcc 47379134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 27392497 - 27392571
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    |||||||||||||||||||  ||||||||  ||   |||| ||||||||||||||||||||||||||||| ||||    
T  27392497 gttaaatatgtttttagtctatataaaattaagatttttttagtttagtccttacttaattttaatagttttttt 27392571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 28164128 - 28164055
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | |||||||||||||||| ||||||||||||||||  |||||||||    
T  28164128 atatgtttttggtccctataaaattgggac-ttttaagtttagtcctaacttaattttaatagtgcttttagtcc 28164055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 28448268 - 28448346
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||| | ||||||||||| | |   || ||||||||||||||||||||||||||||| | |||||||||    
T  28448268 ttaaatatgtttttggaccctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttagtcc 28448346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 38114623 - 38114513
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||||| |||||||||||||   | | ||| ||||||| || ||||||||||||||| ||| |||||||||  | ||||| | | |||| |    
T  38114623 gttaaatatgtttttggtccctataaaataaggacctttcaagtttaatcattacttaattttaatggttcttttagtccctaaaaaaaaattctgcact 38114524  T
Q  228 cagtattagtc 238  Q
    |||||||||||    
T  38114523 cagtattagtc 38114513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 44451975 - 44452049
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | || |||||||||||||||||||||| |||||||  |||||||||    
T  44451975 atatgtttttggtccctataaaattgtgaccttataagtttagtccttacttaattataatagtgtttttagtcc 44452049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 47309319 - 47309397
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||| |||||||||||||   ||  ||| |||||||||||||||||||||||||| ||| |||||||||    
T  47309319 ttaaatatgtattttgtccctataaaataagggtctttcaagtttagtccttacttaattttaatggttcttttagtcc 47309397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 48220290 - 48220220
Alignment:
Q  135 atgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    |||||| |||||| |||||||| | | | |||||||||||||||||||||||||||||||| | |||||||    
T  48220290 atgtttatagtccttataaaattgggactttttaagtttagtccttacttaattttaatagatattttagt 48220220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 33177831 - 33177754
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||| ||||||||||||| |  |  |||||| ||||||||||| ||||||||||| ||| |||||||    
T  33177831 gttaaatatgtttttggtccctataaaataggagttttttaaatttagtccttatttaattttaatggtttttttagt 33177754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 43938351 - 43938286
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaat 193  Q
    ||||||||||||||| ||||||||||||| |||   || |||||||||||||||||||| ||||||    
T  43938351 gttaaatatgtttttggtccctataaaattgagaacttctaagtttagtccttacttaactttaat 43938286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 44290085 - 44289996
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattt-taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | | |  || ||||||||||||||||||||||||||||| | ||||| |||  |||||||    
T  44290085 gttaaatatgtttttggtccctataaaattgcgacccttctaagtttagtccttacttaattttaatagcttttttaatccctacaaaaa 44289996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 55938448 - 55938399
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  55938448 taagtttagtccttacttaattttaatagattttttagtccttacaaaaa 55938399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 10085901 - 10085813
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| |||| |||||||| | |   ||| ||||||||||||||| |||||||||||| | |||||||||  |||||||    
T  10085901 gttaaatatgtttttggtccttataaaattgggaactttaaagtttagtccttacataattttaatagcttttttagtccctacaaaaa 10085813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 14579140 - 14579060
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||  || ||||||||| | |   || ||||||||||||||||||||||||||||| | ||||||||||    
T  14579140 gttaaatatgtttttgatctctataaaattgggtacttctaagtttagtccttacttaattttaatagcttttttagtcct 14579060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 22068516 - 22068428
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||| | ||||||||||||| |     || ||||||||||||||||||||||||||||| | |||||||||  |||||||    
T  22068516 gttaaatatgtttctggtccctataaaattggaaacttctaagtttagtccttacttaattttaatagattttttagtccctacaaaaa 22068428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 33177298 - 33177386
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||  |||||||||||| | | | ||| ||||||| ||| |||||||||||||||| | |||||||||  |||||||    
T  33177298 gttaaatatgtttttgatccctataaaatagggacctttcaagtttaatccatacttaattttaatagattttttagtccctacaaaaa 33177386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 38499667 - 38499627
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  38499667 taagtttagtccttacttaattttaatagtttttttagtcc 38499627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 47309852 - 47309764
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||| ||||| ||||||||||||| | | | ||| ||||||| |||||||||||||||||||  | |||||||||  |||||||    
T  47309852 gttaaatatatttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaatatattttttagtccctacaaaaa 47309764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 51395490 - 51395578
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| || |||||||||| | |   || ||||||||||||||||||||||||||||  | |||||||||  |||||||    
T  51395490 gttaaatatgtttttggttcctataaaatagggaacttctaagtttagtccttacttaattttaataagttttttagtccctacaaaaa 51395578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 3873582 - 3873504
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| |||||||||||||   | | |||||||||||||  |||||||||||| |||||| |||||||||    
T  3873582 gttaaatatgtttttggtccctataaaatatggaccttttaagtttagtttttacttaatttt-atagttcttttagtcc 3873504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 38499172 - 38499251
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||| |||||| ||||| | |   |||||||||||||| ||| ||||||||||||||  |||||||||    
T  38499172 gttaaatatgtttttaatccctaaaaaattgtgatcttttaagtttagtctttatttaattttaatagtatttttagtcc 38499251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 48082863 - 48082796
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||| ||||||||| ||||||||||||| | | | || |||||| ||||||||||||||||||||||    
T  48082863 gttaattatgtttttggtccctataaaattgcgaccttctaagttaagtccttacttaattttaatag 48082796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 34513423 - 34513349
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| |   | ||||||||||||||| ||||||||||||| |||  |||||||||    
T  34513423 atatgttttttgtccctataaaattggaaccttttaagtttagtccgtacttaattttaaaagtgcttttagtcc 34513349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 55282990 - 55283071
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaat--tttaatagttgttttagtcc 207  Q
    ||||||||| |||||  ||| |||||||| ||||| |||||| |||||||||||||||||  |||||||| | |||||||||    
T  55282990 gttaaatatattttttatccttataaaattgaggccttttaaatttagtccttacttaattatttaatagcttttttagtcc 55283071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 7490580 - 7490657
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||| |||||||||||||   |    |||||||||  |||||||||||||||||||||| |||||||    
T  7490580 gttaaatatgtttttggtccctataaaatttggattctttaagttttatccttacttaattttaatagttcttttagt 7490657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 4850474 - 4850422
Alignment:
Q  167 taagtttagtccttacttaattttaatag-ttgttttagtcctcacaaaaata 218  Q
    ||||||| ||||||||||||||||||||| || |||||||||| |||||||||    
T  4850474 taagtttcgtccttacttaattttaatagttttttttagtccttacaaaaata 4850422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 7499157 - 7499081
Alignment:
Q  131 aaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||| |||| |||||||| |||   || |||||||| || ||||||||||||||||| | |||||||||    
T  7499157 aaatatgtttttggtccttataaaattgagaacttctaagtttattctttacttaattttaataggttttttagtcc 7499081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 45558057 - 45557970
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | |   |||||||||||  || |||||||||||||||| | |||||||||  |||||||    
T  45558057 gttaaatatgtttttggtccctataaaattgggagtttttaagtttaaaccctacttaattttaataggt-ttttagtccatacaaaaa 45557970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 52947639 - 52947706
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcg-aggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||||||| ||||||||||||| | |  ||| | ||||||||||||||||||||||||||||    
T  52947639 gttaaatatgtttttggtccctataaaattggaaacatct-aagtttagtccttacttaattttaatag 52947706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 28163151 - 28163194
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||||| |||||||||||||||  |||||||||    
T  28163151 ttttaagtttagtccttgcttaattttaatagtgtttttagtcc 28163194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 6818210 - 6818140
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    ||||||||| ||||||  | ||| |||||| ||||| |||||| |||| || |||||||||||||||||||    
T  6818210 agttaaataagtttttgattcctgtaaaattgaggccttttaactttaatcattacttaattttaatagtt 6818140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 38114125 - 38114191
Alignment:
Q  139 ttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    |||| ||||||||||||| | | | ||| ||||||| |||||||||||||||||||| | |||||||    
T  38114125 ttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaataggttttttagt 38114191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 42973058 - 42973016
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||||| |||||||||||||||||||||||  |||||||    
T  42973058 ttttaagtttggtccttacttaattttaatagtttgtttagtc 42973016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 48082366 - 48082436
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagt 237  Q
    ||||||||||||||| ||||||||||||| | ||||| |||| |||||||   |||||| ||| |||||||    
T  48082366 taagtttagtccttatttaattttaatagcttttttaatccttacaaaaaatttatgcactcaatattagt 48082436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 1870487 - 1870446
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||| |||||||||||||||||||||||||| | |||||||    
T  1870487 ttttatgtttagtccttacttaattttaataggttttttagt 1870446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 35351551 - 35351600
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||| ||||||||||| | || |||||||||| |||||||    
T  35351551 taagtttagtccttgcttaattttaacattttttttagtccttacaaaaa 35351600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 42972666 - 42972719
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttac 182  Q
    |||||||||||||| ||||||||||||| ||    |||||||||||||||||||    
T  42972666 ttaaatatgtttttggtccctataaaattgaaaacttttaagtttagtccttac 42972719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 44289600 - 44289649
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | ||||| |||| |||||||    
T  44289600 taagtttagtccttatttaattttaatagcttttttaatccttacaaaaa 44289649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 48219801 - 48219850
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaa 213  Q
    |||||||||||||||| |||||| |||||||| | |||||||||| ||||    
T  48219801 ttttaagtttagtcctcacttaaatttaatagcttttttagtccttacaa 48219850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 53324190 - 53324105
Alignment:
Q  131 aaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||| ||||||||||||| | |   ||| ||||||| || ||||||||||||||||    |||||||||| |||||||    
T  53324190 aaatatgtttttggtccctataaaatagggatctttcaagtttaatctttacttaattttaataaaaattttagtccttacaaaaa 53324105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 6589144 - 6589116
Alignment:
Q  167 taagtttagtccttacttaattttaatag 195  Q
    |||||||||||||||||||||||||||||    
T  6589144 taagtttagtccttacttaattttaatag 6589116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 20650417 - 20650469
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||| |||| |||||||||| | |||||||||  |||||||    
T  20650417 ttttaagtttagtcctcactttattttaatagcttttttagtccctacaaaaa 20650469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 40391147 - 40391119
Alignment:
Q  128 gttaaatatgtttttagtccctataaaat 156  Q
    |||||||||||||||||||||||||||||    
T  40391147 gttaaatatgtttttagtccctataaaat 40391119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 5e-74; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 45234473 - 45234718
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||| |||| ||||       ||||||||||||||||||  || ||||||||||||||||| ||||||| |||||||||||||||    
T  45234473 aaattttattaaatttttgatccccaacgtttttttccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacgtg 45234572  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45234573 gatgccacatctgacttttttttgttgggttaaatatgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgt 45234672  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||||||||||| | |||||||||| ||||||    
T  45234673 tttagtccttacaaaaatactatgcactaagtattagtcactgctc 45234718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 116681 - 116918
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       |||||||||| |||||||| || ||||||||||||||| | ||| ||| || ||||||||||||    
T  116681 aaattttattaaatttttggtccccaacgtttttttccgttagcaatataggtcctcgctgttaattgttgctgcttgagtaaacggcgaagcacacgtg 116780  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  116781 gatgccacatctgacttttttt-gttgggttaaatatgtttttagtccctataaaatggaggcattttaagtttagtccttacttaattttaatagttgt 116879  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||||| |||||||||||||||| ||| ||||||||    
T  116880 tttagtccttacaaaaatactatgcactcaatattagtc 116918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 1430442 - 1430197
Alignment:
Q  1 aaattttattaaatttttggtccca-acgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||||||||  |||       ||||||||||||||||||  || ||||||||||||||||| ||||||| |||||||||||| ||    
T  1430442 aaattttattaaatttttggtccccgacgtttttttccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacatg 1430343  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||         ||  |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  1430342 gatgccacatctgacctttttttttttggttaaatatgtttttagtccctgtaaaattgaggcattttaagtttaatccttacttaattttaatagttgt 1430243  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||||||  ||||||||||||||| |||||||||||| ||||||    
T  1430242 tttagtcctttcaaaaatactatgcactcagtattagtccctgctc 1430197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 45235846 - 45235640
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||    |||||||||||||||||| ||||||||||||||||||||||||||| || || ||||        |||  ||||||||    
T  45235846 ccgttagcaaaataggtca---ttgttaattgttgctgattgagcaaatggtgaagcacacgtggatgtcatatttgacgtttttttgttaggttaaata 45235750  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||    
T  45235749 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactacgcactcagtatta 45235650  T
Q  236 gtctctgctc 245  Q
    ||| ||||||    
T  45235649 gtcgctgctc 45235640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 50615573 - 50615365
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnn-gttcagttaaat 134  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||||         |||  |||||||    
T  50615573 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacgg--aagcacacgtggatgccacatctgactttttttttgttgggttaaat 50615476  T
Q  135 atgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatt 234  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  50615475 atgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatacaatgcattcaatatt 50615376  T
Q  235 agtctctgctc 245  Q
    | |||||||||    
T  50615375 attctctgctc 50615365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 37178733 - 37178942
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||| ||||||||||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||        |||  ||||||||    
T  37178733 ccgttagtaaaataggtcctcgttgttaattgttgctaattgagcaaacggtgaagcacacgtggatgccacatctgactttttcttgttgggttaaata 37178832  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| |||||| ||| |||||    
T  37178833 tgtttttaatccctatacaattgaggcattttaagtttagtccttacttaattttaatagttgttatagttcttacaaaaatattatgcactcaatatta 37178932  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  37178933 gtctctgctc 37178942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 53396887 - 53397096
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||| ||||||||||  ||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||||| ||        |||   |||||||    
T  53396887 ccgttaggaaaataggtcatcgttgttaattgttgttgattgagcaaacggtgaagcacacgtggatgtcacatctaacttttttttgttggattaaata 53396986  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||    
T  53396987 tgtttttagtccctataaaattgagacattataagtttagtccttacttaattttaatagttgttttagtccttacaaaaatattatgcactcagtatta 53397086  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  53397087 gtctctgctc 53397096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 54185825 - 54185610
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgc------tgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagt 129  Q
    |||||||||||||| |||| || ||||||||||||       |||| ||||||| ||||||||||||||||||||||||||||||        |||  ||    
T  54185825 ccgttagcaaaataagtcctcgctgttaattgttgacgttgttgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttttgttgggt 54185726  T
Q  130 taaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattca 229  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||    
T  54185725 taaatatgtttttagtccctataaaattgagacattttaagtttagtccttacttaattttaatagttgttttagtcattacaaaaatactatgcactca 54185626  T
Q  230 gtattagtctctgctc 245  Q
    ||||||||||||||||    
T  54185625 gtattagtctctgctc 54185610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 44558069 - 44557863
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||  || ||||||||||||||||| |||||||  |  ||| ||||| ||||||||||||||||        |||  ||||||||    
T  44558069 ccgttagcaaaataggtcttcgctgttaattgttgctgattgagcaaacag--aagaacacgcggatgccacatctgacttttttt-gttgggttaaata 44557973  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  44557972 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatattatgcattcaatatta 44557873  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  44557872 gtctctgctc 44557863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 27867834 - 27868076
Alignment:
Q  1 aaattttattaaatttttggtcc-caacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||||||| |||||       |||| |||||||||||||| ||||||||||||||||||||   ||||| |||||||||||| ||    
T  27867834 aaattttattaaatttttggtcctcaacgtttttttccgt-agcaaaataggtcctcgttgttaattgttgctgattaggcaaacggtgaagcacacatg 27867932  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||         | |  ||||||||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  27867933 gatgccacatctgactttcttttttgc--ttaaatatgtttttagtccctgtaaaattgagacattttaagtttagtcattacttaattttaatagttgt 27868030  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||| ||||||||| |||||||||||| ||||||    
T  27868031 tttagtccttacaaaattactatgcactcagtattagtccctgctc 27868076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 46 - 245
Target Start/End: Complemental strand, 117925 - 117728
Alignment:
Q  46 aataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagt 145  Q
    ||||||||| || |||||||||||| |||| ||||||| ||  ||||||||||||||||||||||||||        |||  ||||||||||||||||||    
T  117925 aataggtcctcgctgttaattgttgttgattgagcaaacgg--aagcacacgtggatgccacatctgacttttttttgttgggttaaatatgtttttagt 117828  T
Q  146 ccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
      ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  117827 ttctataaaattgaggcattttaagtttagtgcttacttaattttaatagttgttttagtccttacaaaaatactatgcattcaatattagtctatgctc 117728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 38 - 245
Target Start/End: Original strand, 19669494 - 19669700
Alignment:
Q  38 gttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatg 137  Q
    ||||| ||||||||||| || ||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||| ||        |||  ||||||||||    
T  19669494 gttagtaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgcggatgccacttctaacttttttttgttgggttaaatatg 19669593  T
Q  138 tttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagt 237  Q
    |||| |||||| ||||||| |||||||||||| |||||||||||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||    
T  19669594 ttttaagtccccataaaattgaggcattttaattttagtccttacttaattttaatagttg-tttaatccttacaaaaatactatgcactcagtattagt 19669692  T
Q  238 ctctgctc 245  Q
    ||||||||    
T  19669693 ctctgctc 19669700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 36 - 221
Target Start/End: Original strand, 32942781 - 32942965
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||| ||||||||||| || ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||        |||  ||||||||    
T  32942781 ccgttagaaaaataggtcctcgctgttaattgttgctgattgagcaaacagtgaagcacacgtggatgccacatctgacttttttt-gttgggttaaata 32942879  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatacta 221  Q
    ||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32942880 tgttttttgtccctatataattgaggcattttgagtttagtccttacttaattttaatagttgttttagtccttacaaaaatacta 32942965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 245
Target Start/End: Original strand, 53439117 - 53439325
Alignment:
Q  38 gttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcag-ttaaatat 136  Q
    ||||||||||||||||  ||||||||||| ||| |||| ||||||| ||||||||||||||||||| ||||||||||         ||  | ||||||||    
T  53439117 gttagcaaaataggtcatcgttgttaattattgttgattgagcaaacggtgaagcacacgtggatgtcacatctgacttttttttttttggattaaatat 53439216  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    ||||||||| |||||||||| ||| |||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  53439217 gtttttagttcctataaaattgagacattataagtttagtacttacttaattttaatagttgttttagtccttacaaaaatattatgcactcagtattag 53439316  T
Q  237 tctctgctc 245  Q
    |||||||||    
T  53439317 tctctgctc 53439325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 39 - 245
Target Start/End: Original strand, 45387239 - 45387440
Alignment:
Q  39 ttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgt 138  Q
    ||||||||||||||||    ||||||||||||||||| ||||||| |||     ||||||||||||||||||||||        |||  ||| |||||||    
T  45387239 ttagcaaaataggtccttagtgttaattgttgctgattgagcaaacggt-----acacgtggatgccacatctgacttttttttgttgggttgaatatgt 45387333  T
Q  139 ttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| | ||||||||||||    
T  45387334 ttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagatgttttagtctttacaaaaatactatgtactcagtattagtc 45387433  T
Q  239 tctgctc 245  Q
    |||||||    
T  45387434 tctgctc 45387440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 36 - 238
Target Start/End: Original strand, 44555160 - 44555358
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||| |||||||||| || | |||||||||| |||| ||||||| ||    ||||||||||||||||||||||||        |||  ||||||||    
T  44555160 ccgttagcgaaataggtcctcgctattaattgttgttgattgagcaaacgg----gcacacgtggatgccacatctgacttttttt-gttgggttaaata 44555254  T
Q  136 tgtttttagtccctataaaatcgaggcattttaa-gtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatt 234  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  44555255 tgtttttagtccctataaaattgaggcattttaaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcagtatt 44555354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 37180102 - 37179862
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       || ||||||||||||||||  | | ||||||||||||||| ||||||| || |||||||||  |    
T  37180102 aaattttattaaatttttggtccccaacgtttttttccattagcaaaataggtccttgctattaattgttgctgattgagcaaacggagaagcacacaag 37180003  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||         ||  ||  ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37180002 gatgccacatctgactttt-----ttttgtataatatgtttttagtccctgcaaaattgaggcattttaagtttagtccttacttaattttaatagttgt 37179908  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| ||||||||| |||||| |||||||||||| ||||||    
T  37179907 tttagtccttacaaaaatattatgcactcagtattagtccctgctc 37179862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 50614303 - 50614540
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| |||        || ||| |||||||||||  || ||||||||||||||||| ||||||| |||||||||||||||    
T  50614303 aaattttattaaatttttggtccccaacatttttttcctttaacaaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacgtg 50614402  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||| ||||||||||        |||  ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  50614403 gatgtcacatctgacttttttt-gttgggttaaatatatttttagtctctataaaattgaggcattttaagtttagtccttatttaattttaatagttgt 50614501  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||| |||| ||||||||| ||| || ||||||||||||    
T  50614502 tttaatccttacaaaaatattatacactcagtattagtc 50614540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 32146793 - 32146997
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnn-gttcagttaaat 134  Q
    ||||||| ||||||| ||| || ||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||         |||  |||||||    
T  32146793 ccgttagtaaaatagatcctcgctgttaattgttgctgattgagcaaacggtgaatcacacgtggatgccacatctgactgtttttttgttgggttaaat 32146892  T
Q  135 atgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatt 234  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||      || ||||||||| |||||| ||||||||    
T  32146893 atgtttttagtccctataaaattgaggcattttaagtttagtcattacttaattttaatagttgtt------cttacaaaaatattatgcactcagtatt 32146986  T
Q  235 agtctctgctc 245  Q
    |||||||||||    
T  32146987 agtctctgctc 32146997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 39 - 245
Target Start/End: Complemental strand, 32944105 - 32943905
Alignment:
Q  39 ttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgt 138  Q
    |||||||||||| ||| |  ||||||||||||||||| ||||||| |||||||||||| | |||| ||||||||||         ||  |||||||||||    
T  32944105 ttagcaaaatagttcctcactgttaattgttgctgattgagcaaacggtgaagcacac-tagatgtcacatctgacttttt----ttttgttaaatatgt 32944011  T
Q  139 ttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||||||||    
T  32944010 ttttagtccctgtaaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttataaaaat-ctatgcactcagtattagtc 32943912  T
Q  239 tctgctc 245  Q
     ||||||    
T  32943911 cctgctc 32943905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 32148136 - 32147894
Alignment:
Q  1 aaattttattaaatttttggtcc-caacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||| |||| |||||       | |||| |||||||||||| ||  ||||||||||||||||  |||||| |||||||||||  ||    
T  32148136 aaattttattaaattttttgtcctcaacgtttttttctgttatcaaaataggtcctcgcagttaattgttgctgattaagcaaacggtgaagcacaaatg 32148037  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    ||| |||||||||||         ||  |||||||||||||||||||||  |||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  32148036 gataccacatctgactttttt---ttttgttaaatatgtttttagtccccgtaaaattgaggcattttaagtttaattcttacttaattttaatagttgt 32147940  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||| |||| |||||||||||||||| |||||||||||| ||||||    
T  32147939 tttattccttacaaaaatactatgcactcagtattagtccctgctc 32147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 37481467 - 37481354
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||| || |||||||||  ||||| |    
T  37481467 gttaaatatgtttttagtccctataaaattgaggcattttaagtttaatccttatttaattttaatagttgttttagtgcttacaaaaatatcatgcact 37481368  T
Q  228 cagtattagtctct 241  Q
    ||| ||||||||||    
T  37481367 cagaattagtctct 37481354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 215
Target Start/End: Complemental strand, 41786574 - 41786404
Alignment:
Q  39 ttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgt 138  Q
    |||||||||||||||  |  ||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||         ||  ||  |||||||    
T  41786574 ttagcaaaataggtcatcactgttaattgttgctgattgagcaaacggtgaagcatacatggatgccacatctgactttttt---ttttgt--aatatgt 41786480  T
Q  139 ttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaa 215  Q
    ||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||| |||| ||||||    
T  41786479 ttttagtcc-tataaaattgaggcattttaagtttaatctttacttaattttaatagttgttttaatccttacaaaa 41786404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 23917213 - 23917301
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||| ||||||||| |||   |||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  23917213 gttaaatatgtttttggtctctataaaattgagatcttttaagtttagtccttacttaattttaatagttcttttagtccttacaaaaa 23917301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 53518195 - 53518115
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||||||||||||||||| | | | |||||||||||||||||||||||||||||||||| ||||| ||||    
T  53518195 gttaaatatgtttttagtccctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttaatcct 53518115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 44809248 - 44809169
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| |   | |||||||||||||||||||||||||||||||||| |||||||||    
T  44809248 gttaaatatgtttttggtccctataaaattggaaccttttaagtttagtccttacttaattttaatagttcttttagtcc 44809169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 8576309 - 8576204
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    ||||||||||  |||||||||||| ||| | |||||||||||||||||||||||||||||||||  |||||||||  | ||||| | |||||| |||||     
T  8576309 atatgtttttgctccctataaaattgagaccttttaagtttagtccttacttaattttaatagtgtttttagtccatataaaaaaattatgcactcagtt 8576210  T
Q  233 ttagtc 238  Q
    ||||||    
T  8576209 ttagtc 8576204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 29348160 - 29348237
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||| ||||||||||||| | | | ||||||||||||||||||||||||||||||| || |||||||    
T  29348160 gttaaatatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaataattcttttagt 29348237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 53377684 - 53377605
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattt-taagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||||||||||||||||  ||| | || ||||||||||||||||||||||||||||||| |||||||||    
T  53377684 gttaaatatgtttttagtccctataaaatt-aggaacttctaagtttagtccttacttaattttaatagtttttttagtcc 53377605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 34995423 - 34995490
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||||||| ||||||||||||| ||| | ||||||| ||||||||||||||||||||||||    
T  34995423 gttaaatatgtttttggtccctataaaattgagaccttttaagattagtccttacttaattttaatag 34995490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 53377208 - 53377283
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    ||||||||||||||||||||||||||| | |   |||||||||||||||| ||||||||||||||||||| |||||    
T  53377208 gttaaatatgtttttagtccctataaagttgtaacattttaagtttagtcattacttaattttaatagttctttta 53377283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 52701050 - 52701124
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| ||| | |||||||||||||| ||||||||||||||||||  |||||||||    
T  52701050 atatgtttttggtccctataaaattgagaccttttaagtttagtctttacttaattttaatagtgtttttagtcc 52701124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 23917737 - 23917648
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaata-gttgttttagtcctcacaaaaa 216  Q
    ||||||||| ||||| ||||||||||||| |||   || |||||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  23917737 gttaaatatttttttggtccctataaaattgagaatttctaagtttagtccttacttaattttaataggtttttttagtccccacaaaaa 23917648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 33225673 - 33225746
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    |||||||||||||| ||||||||||||| |||   || ||||||||||||||||||||||||||||||| ||||    
T  33225673 ttaaatatgtttttggtccctataaaattgagatcttctaagtttagtccttacttaattttaatagttttttt 33225746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 41928244 - 41928139
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||| ||||||||||||| | | | ||||||||||||||||||||||||| |||||||  |||||||||  | ||||| | |||||| |||||     
T  41928244 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattataatagtgtttttagtccatataaaaaaattatgcactcagtt 41928145  T
Q  233 ttagtc 238  Q
    ||||||    
T  41928144 ttagtc 41928139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 33226829 - 33226761
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    |||||||||||||| ||||||||||||| ||| | || |||||||||| ||||||||||||||||||||    
T  33226829 ttaaatatgtttttggtccctataaaattgagaccttctaagtttagttcttacttaattttaatagtt 33226761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 54185395 - 54185531
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    |||||||||||||||||  || |||||||||||| ||||  |||||| |||||||||||| ||||||||||| |||||         ||  |||||||||    
T  54185395 cgttagcaaaataggtcatcgctgttaattgttggtgattaagcaaacggtgaagcacacatggatgccacacctgacttttttattttttgttaaatat 54185494  T
Q  137 gtttttagtccctataaaatcgaggcattttaagttt 173  Q
     |||||| ||||||||||||  ||| |||||||||||    
T  54185495 atttttaatccctataaaattaaggtattttaagttt 54185531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 9018438 - 9018351
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||| |||| |||||||| ||    |||||||||||||||||||||||||||||||  | |||||||||| |||||||    
T  9018438 ttaaatatgtttttggtccttataaaatggataatttttaagtttagtccttacttaattttaatacattttttagtccttacaaaaa 9018351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 11045286 - 11045365
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||  ||||||||||||| | | | ||||||||||| |||||||||||||| ||||||| |||||||||    
T  11045286 gttaaatatgttttaggtccctataaaattgggaccttttaagtttaatccttacttaatttgaatagttcttttagtcc 11045365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 25249899 - 25249978
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | ||  ||| |||||||||||||| ||||||||||| ||| |||||||||    
T  25249899 gttaaatatgttttttgtccctataaaataggggtctttcaagtttagtccttaattaattttaatggttcttttagtcc 25249978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 38174319 - 38174232
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||| || |||||||||| | | | ||||||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  38174319 ttaaatatgtttttggttcctataaaatagggaccttttaagtttaatccttacttaattttaataggttttttagtccatacaaaaa 38174232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 40762478 - 40762557
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||| |||||||||| |||||||| | |   |||||||||||||||||||||||||||||||| | |||||||||    
T  40762478 gttaaatatatttttagtccttataaaattgggaatttttaagtttagtccttacttaattttaataggttttttagtcc 40762557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 52702066 - 52701992
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | |||| ||||||||||||||||||||||||||||  |||||||||    
T  52702066 atatgtttttggtccctataaaattgggacttttttagtttagtccttacttaattttaatagtgtttttagtcc 52701992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 19601433 - 19601542
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||| |  |||||||||||| ||| | || |||||||| || ||||||||||||||||| | |||||||||| | ||||| | |||||| |    
T  19601433 gttaaatatgtttctgatccctataaaattgagaccttctaagtttaatcattacttaattttaatagatattttagtccttataaaaaaattatgcact 19601532  T
Q  228 cagtattagt 237  Q
    | ||||||||    
T  19601533 cggtattagt 19601542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 38173786 - 38173863
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||| ||||||||||||| |     ||| |||||||||||||||||||||||||||||| |||||||    
T  38173786 gttaaatatgtttttggtccctataaaataggaaactttcaagtttagtccttacttaattttaatagttcttttagt 38173863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 14525206 - 14525127
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattt-taagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||| | | || |||| ||||||||||||||||||||||||||||| | |||||||||    
T  14525206 gttaaatatgtttttcgtccctataaatttg-ggaatttctaagtttagtccttacttaattttaataggttttttagtcc 14525127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 45419662 - 45419750
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | |   || | ||||||||||||||||||||||||||| | |||||||||  |||||||    
T  45419662 gttaaatatgtttttggtccctataaaattgggaacttctgagtttagtccttacttaattttaataggttttttagtccctacaaaaa 45419750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 53517661 - 53517749
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| ||||||||| ||||||||||||| |||   ||||||||||| |||||| ||||||||||||| | |||||||||  |||||||    
T  53517661 gttaattatgtttttggtccctataaaattgagaacttttaagtttaatccttatttaattttaataggttttttagtccctacaaaaa 53517749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 3173888 - 3173809
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||| ||| ||||||||| ||| | | | ||||||||||| ||||||||||||||||| |||| |||||||||    
T  3173888 gttaaatatgtctttggtccctatacaattgggaccttttaagtttaatccttacttaattttaacagttcttttagtcc 3173809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 29348690 - 29348611
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||| ||||||||||||||||   |   || ||||||||||||||||||||||||||||| | |||||||||    
T  29348690 gttaaatatgttcttagtccctataaaattacgaacttctaagtttagtccttacttaattttaataggttttttagtcc 29348611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 31990956 - 31991019
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagt 196  Q
    |||||||||| ||||||||||||| ||| | ||||||||||| || ||||||||||||||||||    
T  31990956 atatgtttttggtccctataaaattgagaccttttaagtttaatctttacttaattttaatagt 31991019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 44808716 - 44808795
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||| ||||||||||||   |   || ||||||||||||||||||||||||||||| | |||||||||    
T  44808716 gttaaatatgtttttaatccctataaaattacgaacttctaagtttagtccttacttaattttaataggttttttagtcc 44808795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 45420189 - 45420115
Alignment:
Q  132 aatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||| ||||||||||||| | | | |||||||||| || |||||||||||||||||||| |||||||||    
T  45420189 aatatgtttttggtccctataaaattgggaccttttaagttt-gttcttacttaattttaatagttcttttagtcc 45420115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 8575193 - 8575267
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| |     |||||||||||||||||||||||||||||||||  |||||||||    
T  8575193 atatgttttttgtccctataaaattggaatcttttaagtttagtccttacttaattttaatagtgtttttagtcc 8575267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 25233267 - 25233193
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||| ||||||||| |   | |||||||||||||||||||||||||||||||||  |||||||||    
T  25233267 atatgtttttggtctctataaaattgtaaccttttaagtttagtccttacttaattttaatagtgtttttagtcc 25233193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 33475359 - 33475433
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| |   | ||||||||||||||||||||||||| |||||||  |||||||||    
T  33475359 atatgttttttgtccctataaaattggaaccttttaagtttagtccttacttaattataatagtgtttttagtcc 33475433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 25353363 - 25353258
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||||||||||||||||| |   | |||||||| |||| ||||||||||| |||||||  |||||||||  | ||||| | |||||| |||||     
T  25353363 atatgtttttagtccctataaaattggaaccttttaagtatagttcttacttaattataatagtgtttttagtccatataaaaaaattatgcactcagtt 25353264  T
Q  233 ttagtc 238  Q
    ||||||    
T  25353263 ttagtc 25353258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 23883743 - 23883683
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattt 189  Q
    |||||||||||||| ||||||||||||| | | | ||| ||||||||||||||||||||||    
T  23883743 ttaaatatgtttttggtccctataaaattgggacttttcaagtttagtccttacttaattt 23883683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 34995948 - 34995860
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | |    | ||||||||||||||||||||||||||||| | ||||| |||  |||||||    
T  34995948 gttaaatatgtttttggtccctataaaattgggaacatctaagtttagtccttacttaattttaatagcttttttaatccctacaaaaa 34995860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 46295472 - 46295384
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||| ||||| ||||||||||||| | | | || |||||||| |||||||||||||||||||| | ||||| |||  |||||||    
T  46295472 gttaaatatatttttggtccctataaaattgtgaccttctaagtttaatccttacttaattttaatagcttttttaatccctacaaaaa 46295384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 54269255 - 54269176
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||  |||||||||||| |||   ||||||||| ||| |||||||||||||||||||  ||||||||||    
T  54269255 gttaaatatgtttttgatccctataaaattgagtttttttaagtt-agttcttacttaattttaatagtatttttagtcct 54269176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 21749452 - 21749563
Alignment:
Q  131 aaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag-ttgttttagtcctcacaaaaatactatgcattca 229  Q
    |||||||||| | ||||||||||||| | | | ||||||||| ||||||||||||||||||| || || | |||||| | | ||||| | | |||| |||    
T  21749452 aaatatgtttatggtccctataaaattgggaccttttaagttcagtccttacttaattttaaaagtttatgttagtctttaaaaaaaaattctgcactca 21749551  T
Q  230 gtattagtctct 241  Q
    ||||||||||||    
T  21749552 gtattagtctct 21749563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 25250433 - 25250354
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | |   ||| || |||||||||||||||| |||||| ||| |||||||||    
T  25250433 gttaaatatgtttttggtccctataaaatagggatctttcaactttagtccttacttaactttaatggttcttttagtcc 25250354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 44557008 - 44556953
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaatt 188  Q
    |||||||||| ||||||||||||| | | | |||||||||||||||||||||||||    
T  44557008 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaatt 44556953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 46294974 - 46295045
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||||||||||| ||||||||||||| | ||||| |||| ||||||| | | |||||||| ||||||||    
T  46294974 taagtttagtccttatttaattttaatagcttttttaatccttacaaaaaaattctgcattcaatattagtc 46295045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 44555806 - 44555911
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||| ||| ||||||||| | |   ||| ||||||||||||||||||||| |||||||  |||||||||  | ||||  | ||||||||||||     
T  44555806 atatgtttttggtctctataaaattgggatctttcaagtttagtccttacttaattataatagtgtttttagtccatataaaacaattatgcattcagtt 44555905  T
Q  233 ttagtc 238  Q
    ||||||    
T  44555906 ttagtc 44555911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 15771816 - 15771856
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttag 204  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  15771816 ttttaagtttagtccttacttaattttaatagctattttag 15771856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 27492198 - 27492278
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||| ||  |||||||| | |   |||||||||||||  ||| ||||||||||||||| ||||||||||    
T  27492198 gttaaatatgtttttaatctatataaaattgggatcttttaagtttagtttttatttaattttaatagttcttttagtcct 27492278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 27492732 - 27492644
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||  |||||||||||| |||   || ||||||||||||| | ||||||||||||| | ||||| |||  |||||||    
T  27492732 gttaaatatgtttttgatccctataaaattgagaacttctaagtttagtcctcaattaattttaatagcttttttattccctacaaaaa 27492644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 16056324 - 16056281
Alignment:
Q  163 attttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||    
T  16056324 attttaagtttagtctttacttaattttaatagttttttaagtc 16056281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 41927160 - 41927215
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaatt 188  Q
    |||||||||| ||||||||||||| | | |||||||||| ||||||||| ||||||    
T  41927160 atatgtttttggtccctataaaattgggacattttaagtatagtccttatttaatt 41927215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 54268732 - 54268819
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||| ||||||||||||| ||    || ||||||||||  ||||||||||||||||| | ||||| |||  |||||||    
T  54268732 ttaaatatgtttttggtccctataaaattgaaaatttataagtttagtttttacttaattttaatagcttttttaatccctacaaaaa 54268819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 28260618 - 28260540
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||| |||| ||||||||   |  ||||||| | || | |||||||||||||||||||| |||||||||    
T  28260618 ttaaatatgtttttggtccttataaaatttggatattttaaatataattcttacttaattttaatagtttttttagtcc 28260540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 20336778 - 20336859
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctc 209  Q
    ||||||||||||||||||||||| |||||| ||   ||| || |||||||||||   ||||||||| ||  |||||||||||    
T  20336778 gttaaatatgtttttagtccctacaaaatcaagagttttcaactttagtccttataaaattttaatggtaattttagtcctc 20336859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 31992023 - 31991994
Alignment:
Q  164 ttttaagtttagtccttacttaattttaat 193  Q
    ||||||||||||||||||||||||||||||    
T  31992023 ttttaagtttagtccttacttaattttaat 31991994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 39562461 - 39562510
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||||||||||||||||| | ||||| |||  |||||||    
T  39562461 taagtttagtccttacttaattttaatagcttttttaatccctacaaaaa 39562510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 4017230 - 4017186
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||| ||||||| |||||||||||||||||| | ||||||||||    
T  4017230 ttttaggtttagttcttacttaattttaatagatattttagtcct 4017186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 28769675 - 28769647
Alignment:
Q  128 gttaaatatgtttttagtccctataaaat 156  Q
    |||||||||||||||||||||||||||||    
T  28769675 gttaaatatgtttttagtccctataaaat 28769647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 40762975 - 40762931
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||| |||||| |||||||||| || ||||||||||    
T  40762975 ttttaagtttagttcttactaaattttaataattcttttagtcct 40762931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23788081 - 23787837
Alignment:
Q  1 aaattttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgg 100  Q
    ||||||||||||||||||| ||||||||       ||||||||||||||||| | || ||||||||||||||||| ||| ||| ||||||||||||||||    
T  23788081 aaattttattaaatttttgatcccaacgttttttcccgttagcaaaataggtactcgctgttaattgttgctgattgagaaaacggtgaagcacacgtgg 23787982  T
Q  101 atgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtt 200  Q
    ||||||||||||||        |||  ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||| |||||    
T  23787981 atgccacatctgactttattttgttgggttaaatatgtttttagtccctataaaattgattcattttaagtttagtccttacttaattttaatatttgtt 23787882  T
Q  201 ttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  23787881 ttagttctcacaaaaatactatgcattcagtattagtccctgctc 23787837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 42488205 - 42487962
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| |||        ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||| ||    
T  42488205 aaattttattaaatttttggtccccaacacttttttccgttagcaaaataggtcctcgttgttaattgttgctgattgagcaaacggtgaagcacacatg 42488106  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  42488105 gatgccacatctgactttttt--gttgggttaaatatgtttttagtctctataaaattgaggcattttaagtttaatccttacttaattttaatagttgt 42488008  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  42488007 tttagtccttacaaaaatactatgcactcagtattagtctctgctc 42487962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 38 - 245
Target Start/End: Original strand, 44492677 - 44492884
Alignment:
Q  38 gttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatg 137  Q
    ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||        |||  ||||||||||    
T  44492677 gttagcaaaataggtcctcgctgttaattgttactgattgagcaaatggtgaagcacgcgtggatgccacatctgacttttttatgttgggttaaatatg 44492776  T
Q  138 tttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagt 237  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  44492777 gttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcagtattagt 44492876  T
Q  238 ctctgctc 245  Q
    || |||||    
T  44492877 ctttgctc 44492884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 36 - 238
Target Start/End: Complemental strand, 1373700 - 1373499
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||        ||| |||||||||    
T  1373700 ccgttagcaaaataggtcctcgttgttaattgttgctgattgagcaaacggtgaagtacacgtggatgccacatctgacttttttt-gttgagttaaata 1373602  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| | |||||||    
T  1373601 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttaaaaaaatattatgcacttagtatta 1373502  T
Q  236 gtc 238  Q
    |||    
T  1373501 gtc 1373499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 20719535 - 20719325
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnng-ttcagttaaat 134  Q
    ||||||||||||||| ||| || |||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||          ||  |||||||    
T  20719535 ccgttagcaaaatagatcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtggacgccacatctgactttttttttattgggttaaat 20719436  T
Q  135 atgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatt 234  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  20719435 atgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcagtatt 20719336  T
Q  235 agtctctgctc 245  Q
    |||||||||||    
T  20719335 agtctctgctc 20719325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 37 - 238
Target Start/End: Original strand, 21439090 - 21439290
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    ||||||| |||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||         |||  |||||||||    
T  21439090 cgttagcgaaataggtcctcgctgttaattgttgctgattgagcaaatggtgaagcacacgtggatgccacatctga-ttttttttgttgggttaaatat 21439188  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  21439189 gtttttagtccctataaaattgaggcattgtaagtttagtccttacttaattttaatagttgttttagtacttacaaaaatactatgcattcggtattag 21439288  T
Q  237 tc 238  Q
    ||    
T  21439289 tc 21439290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 20701009 - 20701257
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaat---tgttgctgatagagcaaatggtgaagcacac 96  Q
    ||||||||||||||||||| |||| ||||       |||||||||||||  |||| || |||||||   ||||| |||| ||||||||||||||||||||    
T  20701009 aaattttattaaatttttgatccccaacgtttttttccgttagcaaaatgagtcctcgctgttaataattgttgttgattgagcaaatggtgaagcacac 20701108  T
Q  97 gtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagt 196  Q
    |||||||||||||| |||        |||  |||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  20701109 gtggatgccacatccgacttttttttgttgggttaaatatgattttagtccctataaaattgaggcattttaagtttagtgcttacttaattttaatagt 20701208  T
Q  197 tgttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  20701209 tgttttagtccttacaaaaatactatgcactcagtattagtctctgctc 20701257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 23787378 - 23787613
Alignment:
Q  1 aaattttattaaatttttggtccca-acgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||||||||  |||       ||||||||||||||||||| || |||||||||||| |||| ||||||| |||||||||||||||    
T  23787378 aaattttattaaatttttggtcccctacgtttttttccgttagcaaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtg 23787477  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||| |||||||    
T  23787478 gatgccacatctgacttttttt-gttgagttaaatatgtttttagtccctataaaattgaggcattttaagtttcgtccttactt-attttagtagttgt 23787575  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagt 237  Q
    ||||||||| ||||||||| |||||| |||||||||||    
T  23787576 tttagtccttacaaaaatattatgcactcagtattagt 23787613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 3105918 - 3105712
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||||| | |||||||||||||||||         ||  ||||||||    
T  3105918 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacgcatggatgccacatctgactttttt---ttttgttaaata 3105822  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| || ||||||    
T  3105821 tgtttttagtccctgtaaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtacttacataaatactatgcactcggtatta 3105722  T
Q  236 gtctctgctc 245  Q
    ||| ||||||    
T  3105721 gtccctgctc 3105712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 227
Target Start/End: Complemental strand, 20721718 - 20721529
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||||||||||||||  | ||||||||||||||||| |||||||  |  ||||||||||||||||||||||||||        |||  ||||||||    
T  20721718 ccgttagcaaaataggtccttgctgttaattgttgctgattgagcaaacag--aagcacacgtggatgccacatctgacttttttttgttgggttaaata 20721621  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20721620 tgtttttagcccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcatt 20721529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 43933239 - 43933036
Alignment:
Q  36 ccgttagcaaaata--ggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaa 133  Q
    ||||||||||||||  ||||| || | |||||| |||||||| ||||||| ||||||||||||||||||| ||||||||||        |||  ||||||    
T  43933239 ccgttagcaaaatataggtcctcgctcttaatttttgctgattgagcaaacggtgaagcacacgtggatgtcacatctgacttttttttgttgggttaaa 43933140  T
Q  134 tatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtat 233  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||    
T  43933139 tatatttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcggtat 43933040  T
Q  234 tagt 237  Q
    ||||    
T  43933039 tagt 43933036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 18672058 - 18672260
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||        ||       ||||    
T  18672058 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacatggatgccacatctgactttttcttgt-------aata 18672150  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||    
T  18672151 tgtttttagtccttgtaaaattgaggcattttaagtttagtccttacttaattttaatagttgttttaatccttacaaaaatgctatgcactcagtatta 18672250  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  18672251 gtctctgctc 18672260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 36 - 234
Target Start/End: Original strand, 3104785 - 3104983
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||  || ||||||||||||||||| |||||||  |||||||||||||||||||||||||   |        |||  ||||||||    
T  3104785 ccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacagtgaagcacacgtggatgccacatcgctcttttttttgttgggttaaata 3104884  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatt 234  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||    
T  3104885 tgtttttagtccctataaaattgaggcattttaagtttagttcttacttaattttaatagttattttagtccttacaaaaatactatgcactcaatatt 3104983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 33001399 - 33001161
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||| |||| ||||       ||||||||||||||||||  || ||||||||||||||||| ||||||| |||||||||||||||    
T  33001399 aaattttattaaatttttgatccccaacgtttttttccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaagcacacgtg 33001300  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    ||||||||||||||         |||  ||||| ||||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||||||||| |    
T  33001299 gatgccacatctga-ttttttttgttgggttaactatgtttttagtccctataaaattgaggctttttaagttcattccttacttaattttaatagttat 33001201  T
Q  200 tttagtcctcac-aaaaatactatgcattcagtattagtc 238  Q
    ||||||||| || ||||||| |||||| ||||||||||||    
T  33001200 tttagtccttacaaaaaatattatgcactcagtattagtc 33001161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 36 - 238
Target Start/End: Original strand, 42486847 - 42487047
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||  || ||||||||||||||||| |||||||  ||||||||||| ||||||| | |||||||         ||  ||||||||    
T  42486847 ccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacagtgaagcacacatggatgctatatctgacttttttt--tttggttaaata 42486944  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||    
T  42486945 tgtttttagtccctgtaaaattaaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactacgcactcagtatta 42487044  T
Q  236 gtc 238  Q
    |||    
T  42487045 gtc 42487047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 59 - 241
Target Start/End: Original strand, 20719765 - 20719946
Alignment:
Q  59 tgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcg 158  Q
    |||||||||||| | || || |||||| ||||||||||||||||||||||||||||        ||| ||||||||||||||||||||||| |||||| |    
T  20719765 tgttaattgttgttaattgaacaaatgatgaagcacacgtggatgccacatctgacttttttt-gttgagttaaatatgtttttagtccctttaaaattg 20719863  T
Q  159 aggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctct 241  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| | | |||||||||||||    
T  20719864 aggcattttaagtttaatccttacttaattttaatagttgttttagtccttacaaaaatactatgaacttagtattagtctct 20719946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 20721085 - 20720844
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       ||||||||||||||||||| || ||||||||||||||||| ||||||   ||||| ||||| ||    
T  20721085 aaattttattaaatttttggtccccaacgtttttttccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaccagtgaatcacacatg 20720986  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||| ||||||||||         ||  |||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||    
T  20720985 gatgtcacatctgactattttt--tttggttaaatatgtttttagtccctgtaaaattgaagcattttaagtttagtccttatttaattttaatagttgt 20720888  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| ||  ||||||||  || |||||||||||||||||||    
T  20720887 tttagtccttac--aaatactagtcactcagtattagtctctgctc 20720844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 44494037 - 44493794
Alignment:
Q  1 aaattttattaaatttttggtcc-caacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||||||| |||||       ||||||||||||||||||  |  |||||||||||| |||| ||||||| |||||||||||| ||    
T  44494037 aaattttattaaatttttggtcctcaacgtttttttccgttagcaaaataggtcatcactgttaattgttgttgattgagcaaacggtgaagcacacatg 44493938  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||| ||         ||  |||||||||||||||||||| | |||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  44493937 gatgccacatctaacttttttt--tttggttaaatatgtttttagtccatgtaaaattgaggcattttaagttcaatccttacttaattttaatagttgt 44493840  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||| |||| || |||||||||||||  |||||||| |||||||||    
T  44493839 tttattccttaccaaaatactatgcacccagtattaatctctgctc 44493794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 43931898 - 43932137
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||        ||||||||||||||| |  || ||||||||||||||||| ||||||| |||||||||||| ||    
T  43931898 aaattttattaaatttttggtccccaacgttttttttcgttagcaaaataggccttcgctgttaattgttgctgattgagcaaacggtgaagcacacatg 43931997  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
     ||| |||| || ||         || ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43931998 aatgtcacacctaacttttttttttt-agttaaatatgtttttagtccctgtaaaattgaggcattttaagtttagtccttacttaattttaatagttgt 43932096  T
Q  200 tttagtcct--cacaaaaatactatgcattcagtattagtc 238  Q
    ||| |||||   | |||||||||||||| ||||||||||||    
T  43932097 tttggtccttaaaaaaaaatactatgcactcagtattagtc 43932137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 18673349 - 18673106
Alignment:
Q  1 aaattttattaaatttttggtccc--aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgt 98  Q
    ||||||||||||||||||||||||  || |       ||||||| ||||||||||  || |||||||||||||||||  ||||||  |||||||| || |    
T  18673349 aaattttattaaatttttggtcccccaatgtttttttccgttagtaaaataggtcttcgctgttaattgttgctgattaagcaaacagtgaagcatacat 18673250  T
Q  99 ggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttg 198  Q
    ||||||||||||||||         ||  || ||||||||||||||||  | |||||  |||||||||||||||||||||||| |||||||||||||| |    
T  18673249 ggatgccacatctgacttttttt--tttggtcaaatatgtttttagtct-tgtaaaaatgaggcattttaagtttagtccttatttaattttaatagtag 18673153  T
Q  199 ttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||    
T  18673152 ttttagtccttacaaaaatactatgcgttcagtattagtatctgctc 18673106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 21440315 - 21440113
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||| ||  ||||||||||||||| ||| | |           |||  ||||||||    
T  21440315 ccgttagcaaaataggtcatcgttgttaattgttgctgattgagcaaacgg--aagcacacgtggatgtcactttt-----ttttgtgttgggttaaata 21440223  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||  |||||||| | | ||||||||||||| |||||||||||||||||||||| ||||||| || ||||||||| |||||||| | |||||    
T  21440222 tgtttttagtctttataaaattgtgacattttaagtttaatccttacttaattttaatagttattttagttcttacaaaaatattatgcatttaatatta 21440123  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  21440122 gtctctgctc 21440113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 31435922 - 31436002
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||| ||||||||||    
T  31435922 gttaaatatgtttttagtccctataaaattgagaccttttaagtttagtctttacttaattttaatagttcttttagtcct 31436002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 13027855 - 13027777
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||| |||||||||    
T  13027855 ttaaatatgtttttggtccctataaaattgagacattttaagtttagtccttacttaattttaattgtttttttagtcc 13027777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 4328015 - 4327936
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||||||||| |||||| | | | |||||||||||||||||||||||||||||||||| |||||||||    
T  4328015 gttaaatatgtttttagtccctgtaaaattgggaccttttaagtttagtccttacttaattttaatagtttttttagtcc 4327936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 31771200 - 31771279
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| ||| | ||||||| |||||||||||||||||||||||||| |||||||||    
T  31771200 gttaaatatgtttttggtccctataaaattgagaccttttaagcttagtccttacttaattttaatagttattttagtcc 31771279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 41120626 - 41120715
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaat 217  Q
    |||||||||||||||  |||||||||||| | | | |||||||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  41120626 gttaaatatgtttttgatccctataaaattgggaccttttaagtttagtccttacttaattttaatagtttttttagtccttaaaaaaat 41120715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 44287092 - 44287014
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||||||| |||||||||    
T  44287092 ttaaatatgtttttggtccctataaaattggggactttcaagtttagtccttacttaattttaatagttcttttagtcc 44287014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 25100469 - 25100582
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||||| ||||||||||||| | | | ||| |||| ||||||||||||||||||||||| | |||||||||  | |||||   |||||| |    
T  25100469 gttaaatatgtttttggtccctataaaattgggacctttcaagtctagtccttacttaattttaatagctattttagtccctaaaaaaaatttatgcact 25100568  T
Q  228 cagtattagtctct 241  Q
    ||||||||||||||    
T  25100569 cagtattagtctct 25100582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 33000729 - 33000843
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| || |       ||||||||||||||||||| ||  |||||||||||||||| ||| ||| |||||| ||||||||    
T  33000729 aaattttattaaatttttggtccccaatgtttttttccgttagcaaaataggtcctcgcggttaattgttgctgattgagtaaacggtgaaacacacgtg 33000828  T
Q  100 gatgccacatctgac 114  Q
    |||| ||||||||||    
T  33000829 gatgtcacatctgac 33000843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 8392739 - 8392659
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||| ||||||||||||| | | | || ||| ||||||||||||||||||||||| |||||||||||||    
T  8392739 agttaaatatgtttttggtccctataaaattgggaccttctaaatttagtccttacttaattttaatggttgttttagtcc 8392659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 9112081 - 9111970
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||  ||||||||||||| ||| | ||||||||||||||||||||||||| |||||||  |||||||||  | ||||  | |||||| |||||     
T  9112081 atatgttttaggtccctataaaattgagaccttttaagtttagtccttacttaattataatagtgtttttagtccatataaaacaattatgcactcagtt 9111982  T
Q  233 ttagtctctgct 244  Q
    ||||||||||||    
T  9111981 ttagtctctgct 9111970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 34073976 - 34073897
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||| ||||||||||||||||||| |   | |||||| ||||||||||||||||||||||||||| |||||||||    
T  34073976 gttaaatatatttttagtccctataaaattggaaccttttaaatttagtccttacttaattttaatagttcttttagtcc 34073897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 30982510 - 30982584
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| ||| | ||||||||||| |||||||||||||||||||||  |||||||||    
T  30982510 atatgtttttggtccctataaaattgagaccttttaagtttaatccttacttaattttaatagtgcttttagtcc 30982584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 9111458 - 9111563
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||| ||||||||||||| | | | ||||||||||||||||||||||||| |||||||  |||||||||  | ||||| | |||||| |||||     
T  9111458 atatgttttttgtccctataaaattgggaccttttaagtttagtccttacttaattataatagtgtttttagtccatataaaaaaattatgcactcagtt 9111557  T
Q  233 ttagtc 238  Q
    ||||||    
T  9111558 ttagtc 9111563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 35498454 - 35498523
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    |||||||||||||||||| |||||||||| | | | |||||||||||||| |||||||||||||||||||    
T  35498454 gttaaatatgtttttagttcctataaaattgggaccttttaagtttagtctttacttaattttaatagtt 35498523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 3117864 - 3117936
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    |||||||||| ||||||||||||| |||   |||||||||||||||||||||||||||||||||  |||||||    
T  3117864 atatgtttttggtccctataaaattgagatcttttaagtttagtccttacttaattttaatagtgcttttagt 3117936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 6457151 - 6457231
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||| | |||||||||||   | | ||||||||||||| |||||||||||||||||||| |||||||||    
T  6457151 agttaaatatgtttttggcccctataaaatttggaccttttaagtttagttcttacttaattttaatagttcttttagtcc 6457231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 14200841 - 14200929
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||| ||| ||||||||||||| ||    |||||||||||||||||||||||||||||||| | |||||||||  |||||||    
T  14200841 gttaaatatgtatttggtccctataaaattgacatcttttaagtttagtccttacttaattttaatagcttttttagtccctacaaaaa 14200929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 35498969 - 35498881
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| |||||||||  |||||||||||| |||   |||||||||||||||||||||||||||||||| | |||||||||  |||||||    
T  35498969 gttaattatgtttttgatccctataaaattgagaacttttaagtttagtccttacttaattttaataggttttttagtccctacaaaaa 35498881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 41121157 - 41121069
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||| | | |   || ||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  41121157 gttaaatatgtttttggtccctataaagttgggaacttctaagtttagtccttacttaattttaataggttttttagtccttacaaaaa 41121069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 14201379 - 14201300
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||||||||||||||||||||||||||  | | || ||| |||||||||| |||||||||||||| | ||||||||    
T  14201379 agttaaatatgtttttagtccctataaaatcaggactttctaattttagtccttgcttaattttaataggttttttagtc 14201300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 32318105 - 32318210
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||| ||||||||||||| | |   ||||||||||||||||||||||||| |||||||  |||||||||  | ||||| | |||||| |||||     
T  32318105 atatgtttttggtccctataaaattgggatcttttaagtttagtccttacttaattataatagtgtttttagtccatataaaaaaattatgcactcagtt 32318204  T
Q  233 ttagtc 238  Q
    ||||||    
T  32318205 ttagtc 32318210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 25666421 - 25666333
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| |||||| |||||| | | | ||||||||||| |||||| ||||||||||||| | |||||||||  |||||||    
T  25666421 gttaaatatgtttttggtccctgtaaaatagggaccttttaagtttaatccttatttaattttaatagattttttagtccctacaaaaa 25666333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 25665929 - 25666004
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||| |||||| |||||| ||||  ||| ||||||| |||||||||||||||||| ||| ||||||||||    
T  25665929 atatgtttttggtccctgtaaaatagaggtctttcaagtttaatccttacttaattttaatggttcttttagtcct 25666004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 36512385 - 36512307
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | | | |||||||||||||| ||| |||||||||| |||| |||||||||    
T  36512385 gttaaatatgtttttggtccctataaaattg-gaccttttaagtttagtctttatttaattttaacagttcttttagtcc 36512307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 10357236 - 10357309
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||||||| || ||||||||||||||||||| ||||||| |||  ||||| | |||||||||||||||||||    
T  10357236 ttttaagtttaatctttacttaattttaatagttcttttagt-ctctaaaaaaaattatgcattcagtattagtc 10357309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 30982796 - 30982723
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | ||   ||||||||||||||||||||||||||||||||  |||||||||    
T  30982796 atatgtttttggtccctataaaattg-ggacctttaagtttagtccttacttaattttaatagtgcttttagtcc 30982723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 32319350 - 32319276
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | ||||||||||||| ||||||||||| |||||||  |||||||||    
T  32319350 atatgttttttgtccctataaaattgggaccttttaagtttagttcttacttaattataatagtgtttttagtcc 32319276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 33030905 - 33030987
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctca 210  Q
    |||||||||||||||  || ||||||||| | |   |||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  33030905 gttaaatatgtttttgatctctataaaattgggatcttttaagtttagtctttatttaattttaatagtttttttagtcctca 33030987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38276100 - 38276183
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaa 83  Q
    |||||||||||||||||||||||| ||||       ||||||||||||||||||  || ||||||||||||||||| |||||||    
T  38276100 aaattttattaaatttttggtccccaacgtttttttccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaa 38276183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 3118912 - 3118807
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||| ||||| ||||||||||||| | |   ||||||||||| |||||||||||||||||||||  |||||||||  | ||||| | |||||| |||||     
T  3118912 atatctttttggtccctataaaattgggatcttttaagtttaatccttacttaattttaatagtgtttttagtccatataaaaaaattatgcactcagtt 3118813  T
Q  233 ttagtc 238  Q
    ||||||    
T  3118812 ttagtc 3118807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 19176646 - 19176726
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcatt-ttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||||||||||||| ||| | || ||| |||||||||||  ||||||||||||||||| | ||||||||||    
T  19176646 gttaaatatgtttttagtccctatagaattg-ggaattcttaagtttagttattacttaattttaataggttttttagtcct 19176726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 31771735 - 31771648
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattt-taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||  |||||||||||| ||||| | || ||||||||||||||| ||||||||||||||| |||||||||  |||||||    
T  31771735 gttaaatatgttttcggtccctataaaa-cgaggaacttctaagtttagtcctta-ttaattttaatagtttttttagtccatacaaaaa 31771648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 33832535 - 33832454
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||| ||||| ||||||||||||| | | |  ||||||||||||| |  |||||||||||||||| ||||||||||    
T  33832535 agttaaatatatttttggtccctataaaattgggaccatttaagtttagtcttcgcttaattttaatagttcttttagtcct 33832454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 42274176 - 42274263
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattt-taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| |||||||||||||  ||| | || |||||||||||||||||||| |||||||| | |||||||||| |||||||    
T  42274176 gttaaatatgtttttggtccctataaaatt-aggaacttctaagtttagtccttacttaa-tttaataggttttttagtccttacaaaaa 42274263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 10357734 - 10357654
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||| ||||||||||||| |     || |||||||||||||||||| |||||||||| | ||||||||||    
T  10357734 gttaaatatgttttttgtccctataaaattggaaacttctaagtttagtccttacttgattttaatagattttttagtcct 10357654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 13371872 - 13371960
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||| |||||||||| ||||||||||||| |     ||||||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  13371872 gttatatatgtttttggtccctataaaattggaaacttttaagtttaatccttacttaattttaataggttttttagtccatacaaaaa 13371960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 33832001 - 33832089
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| ||||||||| ||| ||||||||| | |   || ||||||||||||||||||||||||||||| | |||||||||  |||||||    
T  33832001 gttaattatgtttttggtctctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttagtccatacaaaaa 33832089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 30749428 - 30749495
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    |||||||||||||||||||| |||||||| |   | ||| ||||||| ||||||||||||||||||||    
T  30749428 gttaaatatgtttttagtccttataaaataggaacctttcaagtttaatccttacttaattttaatag 30749495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 37592764 - 37592831
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||||| | ||| ||||||||| ||    ||||||||||||||||||||||||||||||||    
T  37592764 gttaaatatgtttctggtctctataaaattgaaaacttttaagtttagtccttacttaattttaatag 37592831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 7655118 - 7655045
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | ||||||||||||| ||||||||||||||||| || | |||||||    
T  7655118 atatgttttttgtccctataaaattgggac-ttttaagtttagttcttacttaattttaataattctattagtcc 7655045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 32319927 - 32319853
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||| ||||||||| | | |||||||||||| || ||||||||||| |||||||  |||||||||    
T  32319927 atatgttttttgtctctataaaattgggacattttaagttttgttcttacttaattataatagtgattttagtcc 32319853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 33031394 - 33031345
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||| ||||||||||||||||| | |||||||||| |||||||    
T  33031394 taagtttagtcattacttaattttaataggttttttagtccttacaaaaa 33031345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 40364763 - 40364840
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    |||||||||| |||| ||||||||||||| |     ||||| |||||||||||||||||||||||||| | |||||||    
T  40364763 gttaaatatgcttttggtccctataaaattggaaacttttaggtttagtccttacttaattttaataggttttttagt 40364840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 29809131 - 29809210
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattt-taagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | || ||   |||||||| |||||||||||||||||||| | |||||||||    
T  29809131 gttaaatatgtttttggtccctataaaattg-ggaatgactaagtttaatccttacttaattttaataggttttttagtcc 29809210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 30784591 - 30784504
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||| | |||   ||||||||| |||| ||||||||||||||||| | ||||| |||  |||||||    
T  30784591 gttaaatatgtttttggtccctataaatt-gagaacttttaagttcagtctttacttaattttaataggttttttaatccctacaaaaa 30784504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 44610644 - 44610724
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||| | ||||||| ||||| | | | || |||||||| |||| ||||||||||||||||| |||| ||||    
T  44610644 agttaaatatgtttctggtccctaaaaaattgggaccttctaagtttattcctaacttaattttaatagttttttttgtcc 44610724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 18917118 - 18917204
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| || ||||| |||| |||||||| ||| | ||||||||||||||| | ||||||||||||||||  ||||||||  |||||||    
T  18917118 ttaaaaatattttttgtccttataaaattgagac-ttttaagtttagtccctgcttaattttaatagttcatttagtccctacaaaaa 18917204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 40365257 - 40365214
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||    
T  40365257 ttttaagtttactccttacttaattttaatagttcttttcgtcc 40365214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 30784114 - 30784148
Alignment:
Q  171 tttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||||||||||||||| |||||||    
T  30784114 tttagtccttacttaattttaatagttcttttagt 30784148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 3043772 - 3043695
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||| ||||| || |||||||||| | |   ||||||||||| | |||| ||||||||||||||| |||||||    
T  3043772 gttaaatatatttttggttcctataaaattgggatcttttaagtttaattcttatttaattttaatagttcttttagt 3043695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 8738692 - 8738623
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    |||||| || ||||| ||||||||||||| | | | ||| ||||||| || |||||||||||||||||||    
T  8738692 gttaaaaatatttttggtccctataaaattgggacctttcaagtttaatctttacttaattttaatagtt 8738623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 7439147 - 7439183
Alignment:
Q  170 gtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  7439147 gtttagtccttacataattttaatagttattttagtc 7439183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 8737743 - 8737783
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||| |||||||||||||||||||| | |||||||||    
T  8737743 taagtttaatccttacttaattttaataggttttttagtcc 8737783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 8794829 - 8794801
Alignment:
Q  128 gttaaatatgtttttagtccctataaaat 156  Q
    |||||||||||||||||||||||||||||    
T  8794829 gttaaatatgtttttagtccctataaaat 8794801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 13372324 - 13372257
Alignment:
Q  135 atgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    |||||||| |||||||||||||   | | ||| |||||||||| ||||||||||||||||||| |||||    
T  13372324 atgtttttggtccctataaaatttggacctttcaagtttagtc-ttacttaattttaatagttctttta 13372257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 27694424 - 27694452
Alignment:
Q  128 gttaaatatgtttttagtccctataaaat 156  Q
    |||||||||||||||||||||||||||||    
T  27694424 gttaaatatgtttttagtccctataaaat 27694452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 33031018 - 33031050
Alignment:
Q  176 tccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||||||||| ||||||||||    
T  33031018 tccttacttaattttaatagtttttttagtcct 33031050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 44879595 - 44879683
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| |||| |||||||| ||    | ||||||||| ||| |||||||||||| ||  | |||||||||| |||||||    
T  44879595 gttaaatatgtttttggtccgtataaaattgaaaactgttaagtttaatccatacttaattttagtatgttttttagtccttacaaaaa 44879683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 3335670 - 3335461
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||||||||||||||  | ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||         |||  ||||||||    
T  3335670 ccgttagcaaaataggtccttgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgtcacatctgatttttttttgttgtgttaaata 3335571  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3335570 tgtttttagtccctataaaatcgagacattttaagtttagtccttacttaattttaatagttgttttaatcctcacaaaaatactatgcattcagtatta 3335471  T
Q  236 gtctctgctc 245  Q
    ||| ||||||    
T  3335470 gtccctgctc 3335461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 22971688 - 22971897
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||  |||||||||||||||||||||||| ||||        |||  ||||||||    
T  22971688 ccgttagcaaaataggtcatcgttgttaattgttgctgattgagcaaacagtgaagcacacgtggatgccacatatgacttttttttgttgggttaaata 22971787  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  22971788 tgtttttagttcctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagttcttacaaaaatactatgcactcagtatta 22971887  T
Q  236 gtctctgctc 245  Q
    |||| |||||    
T  22971888 gtctttgctc 22971897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 23816710 - 23816501
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||  |||||||||||||||||||||||| ||||        |||  ||||||||    
T  23816710 ccgttagcaaaataggtcatcgttgttaattgttgctgattgagcaaacagtgaagcacacgtggatgccacatatgacttttttttgttgggttaaata 23816611  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  23816610 tgtttttagttcctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagttcttacaaaaatactatgcactcagtatta 23816511  T
Q  236 gtctctgctc 245  Q
    |||| |||||    
T  23816510 gtctttgctc 23816501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 18503516 - 18503273
Alignment:
Q  1 aaattttattaaatttttggtccca-acgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||||||||  |||       ||||||||||||||| ||| |  | ||||||||||||||| ||| ||| ||  |||||||||||    
T  18503516 aaattttattaaatttttggtccccgacgtttttttccgttagcaaaatagatcctcactattaattgttgctgattgagaaaacgg--aagcacacgtg 18503419  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18503418 gatgccacatctgactcttttttgttgggttaaatatgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgt 18503319  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||    
T  18503318 tttagtccttacaaaaatactatgcattcaatattagtctctgctc 18503273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 37 - 244
Target Start/End: Original strand, 5078791 - 5078998
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    |||||||||||||||||  |  ||||||||||||||||| |||||||   ||||||||||||||||||||||||||||        |||  |||||||||    
T  5078791 cgttagcaaaataggtcatcactgttaattgttgctgattgagcaaactttgaagcacacgtggatgccacatctgacttttttttgttgggttaaatat 5078890  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| || | |||||||||||| ||||||||||||    
T  5078891 gtttttagtccctataaaatcgaagcattttaagtttagtccatacttaattttaatagttgttttagtacttataaaaatactatgtattcagtattag 5078990  T
Q  237 tctctgct 244  Q
    ||||||||    
T  5078991 tctctgct 5078998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 38 - 245
Target Start/End: Original strand, 8230998 - 8231205
Alignment:
Q  38 gttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatg 137  Q
    ||||||||||||||||  |  |||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||        |||  ||||||||||    
T  8230998 gttagcaaaataggtcttcactgttaattgttgttgattgagcaaatgatgaagcacacatggatgccacatctgacttttttttgtttggttaaatatg 8231097  T
Q  138 tttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagt 237  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| | || ||||||||    
T  8231098 tttttagtccctataaaattgaggcattttaagtttagtccttactttattttaatagttgttttagtccttacaaaaataatatggactcggtattagt 8231197  T
Q  238 ctctgctc 245  Q
    ||||||||    
T  8231198 ctctgctc 8231205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 37 - 238
Target Start/End: Complemental strand, 5080008 - 5079808
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    ||||||||||||| |||| || ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||         |||  |||||||||    
T  5080008 cgttagcaaaataagtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccccatctga-ttttttttgttgggttaaatat 5079910  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||    
T  5079909 gtttttagtccctgtaaaattgaggcattttaagtttaatccttacttaattttaatagttgttttagtccttacaaaaatactatgcacttagtattag 5079810  T
Q  237 tc 238  Q
    ||    
T  5079809 tc 5079808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 17246618 - 17246382
Alignment:
Q  1 aaattttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgg 100  Q
    |||||||||||||||||||||||| |         || ||||| |||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||    
T  17246618 aaattttattaaatttttggtccccaacgttatttccattagcgaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtgg 17246519  T
Q  101 atgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtt 200  Q
    ||||||||||| ||        |||   |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |    
T  17246518 atgccacatctaacttttttt-gttggattaaatatgtttttagtccctataaaattgaggcattttaagtttagttcttacttaattttaatagttgct 17246420  T
Q  201 ttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||||||| ||||||||| |||||| || |||||||||    
T  17246419 ttagtccttacaaaaatattatgcactcggtattagtc 17246382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 22972321 - 22972082
Alignment:
Q  3 attttattaaatttttggt-cccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgga 101  Q
    ||||||||||||||||||| |||||||       |||||| ||||| |||||| || |||||||||||| |||| ||| |||||||||||||||| || |    
T  22972321 attttattaaatttttggttcccaacgcttttttccgtta-caaaaaaggtcctcgctgttaattgttgttgattgagaaaatggtgaagcacacatgaa 22972223  T
Q  102 tgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttt 201  Q
    |||||||||||||         ||  |||| ||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  22972222 tgccacatctgactttttt---tttggttatatatgtttttagtccccgtaaaattgaggcattttaattttagtccttacttaattttaatagttgttt 22972126  T
Q  202 tagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||| |||||||||||||||| || |||||||||| |||||    
T  22972125 tagtccttacaaaaatactatgcactcggtattagtctatgctc 22972082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 245
Target Start/End: Original strand, 23816077 - 23816316
Alignment:
Q  3 attttattaaatttttggt-cccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgga 101  Q
    ||||||||||||||||||| |||||||       |||||| ||||| |||||| || |||||||||||| |||| ||| |||||||||||||||| || |    
T  23816077 attttattaaatttttggttcccaacgcttttttccgtta-caaaaaaggtcctcgctgttaattgttgttgattgagaaaatggtgaagcacacatgaa 23816175  T
Q  102 tgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttt 201  Q
    |||||||||||||         ||  |||| ||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  23816176 tgccacatctgactttttt---tttggttatatatgtttttagtccccgtaaaattgaggcattttaattttagtccttacttaattttaatagttgttt 23816272  T
Q  202 tagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||| |||||||||||||||| || |||||||||| |||||    
T  23816273 tagtccttacaaaaatactatgcactcggtattagtctatgctc 23816316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 17244428 - 17244541
Alignment:
Q  132 aatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagt 231  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| | |    
T  17244428 aatatgtttttagtccttataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtcgttacaaaaatactatgcattaaat 17244527  T
Q  232 attagtctctgctc 245  Q
    ||||||||||||||    
T  17244528 attagtctctgctc 17244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 861771 - 861692
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||||||||||||||||| | | | |||||||||||||||||||||||||||||||||| |||||||||    
T  861771 gttaaatatgtttttagtccctataaaattgtgaccttttaagtttagtccttacttaattttaatagttcttttagtcc 861692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 30492606 - 30492716
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||||||| |||||||||  | ||||| | | ||||||    
T  30492606 gttaaatatgtttttggtccctataaaattgggactttttaagtttagtccttacttaattttaatagttcttttagtcccgaaaaaaaaaatctgcatt 30492705  T
Q  228 cagtattagtc 238  Q
    |||||| ||||    
T  30492706 cagtataagtc 30492716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 18804198 - 18804125
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    |||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||    
T  18804198 ttaaatatgtttttggtccctataaaattgagatattttaagtttagtccttacttaattttaatagttttttt 18804125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 2087323 - 2087432
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||| ||||| ||||||||||||| | | | ||| |||||||||||||||||||||||||||||| ||||||||| |  ||||| | |||||| |    
T  2087323 gttaaatatatttttggtccctataaaattgggacctttcaagtttagtccttacttaattttaatagttcttttagtcc-ctaaaaaaaattatgcact 2087421  T
Q  228 cagtattagtc 238  Q
    |||||||||||    
T  2087422 cagtattagtc 2087432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 30660664 - 30660742
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||| ||||||||||||| ||| | ||||||||||||||||| ||||||||||||| || |||||||||    
T  30660664 ttaaatatgtttttggtccctataaaattgagactttttaagtttagtccttgcttaattttaataattcttttagtcc 30660742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 33744538 - 33744626
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||||| | ||||| |||  |||||||    
T  33744538 gttaaatatgtttttggtccctataaaattgcgaccttttaagtttagtccttacttaattttaatagcttttttaatccctacaaaaa 33744626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 843987 - 844066
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||||||| |||||||  | | | ||| |||||||||||||||||||||||||||||| |||||||||    
T  843987 gttaaatatgtttttagtccatataaaagtgcgacctttcaagtttagtccttacttaattttaatagttcttttagtcc 844066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 17697266 - 17697345
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| |||   ||||||||||||||||| |||||||||||||| | |||||||||    
T  17697266 gttaaatatgtttttggtccctataaaattgagaacttttaagtttagtccttgcttaattttaataggttttttagtcc 17697345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 939254 - 939180
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    ||||||||||||||| |||| |||||||| |||   |||||||||||||||||||||||||||||||||| ||||    
T  939254 gttaaatatgtttttggtccatataaaattgagaacttttaagtttagtccttacttaattttaatagttttttt 939180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 14256556 - 14256478
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||| ||||||||| ||||||||||||| ||    |||||||||||||||||||||||||||||||||| ||||||||    
T  14256556 gttaattatgtttttggtccctataaaattgaaagcttttaagtttagtccttacttaattttaatagttcttttagtc 14256478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 20898391 - 20898325
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaata 194  Q
    ||||||||||||||||||||||||||||| ||| | |||||||||||||| || |||||||||||||    
T  20898391 gttaaatatgtttttagtccctataaaattgagaccttttaagtttagtctttccttaattttaata 20898325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 288888 - 288992
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||||||  |||||||||  | ||||| | |||||| |||||     
T  288888 atatgtttttggtccctataaaattgtgtc-ttttaagtttagtccttacttaattttaatagtgtttttagtccatataaaaaaattatgcactcagtt 288986  T
Q  233 ttagtc 238  Q
    ||||||    
T  288987 ttagtc 288992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 5974185 - 5974273
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| |||   || |||||||||| |||||||||||||||||| | |||||||||  |||||||    
T  5974185 gttaaatatgtttttggtccctataaaattgagaacttctaagtttagttcttacttaattttaataggttttttagtccgtacaaaaa 5974273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 15721473 - 15721397
Alignment:
Q  131 aaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||| |||||||||    
T  15721473 aaatatgtttttggtccctataaaataggggtctttcaagtttagtccttacttaattttaatggtttttttagtcc 15721397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 20510376 - 20510456
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||| ||| ||||||||||||| | |   ||||||||||| |||||||||||||||||||||| ||||||||||    
T  20510376 gttaaatatgtgtttggtccctataaaattgggatcttttaagtttactccttacttaattttaatagttcttttagtcct 20510456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 33518769 - 33518649
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttag-tcctcacaaaaatactatgca 225  Q
    |||||||||||||||||||| ||||||||| | |   |||||||||||||| ||||||||||||||||||| | |||| |||| | ||||| | ||||||    
T  33518769 agttaaatatgtttttagtctctataaaattgggatcttttaagtttagtcattacttaattttaatagttatgttagttcctaaaaaaaaaattatgca 33518670  T
Q  226 ttcagtattagtctctgctcc 246  Q
      | |||||||||||| ||||    
T  33518669 cccggtattagtctctcctcc 33518649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 16465476 - 16465413
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaatttta 191  Q
    ||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||    
T  16465476 gttaaatatatttttagtccctataaaattgagaccttttaagtttagtccttacttaagttta 16465413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 22732408 - 22732330
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||| ||||| | | | |||||||||||||||||||||||||||||||| | |||||||||    
T  22732408 gttaaatatgttttt-gtccctacaaaattgggaccttttaagtttagtccttacttaattttaataggttttttagtcc 22732330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 26356412 - 26356491
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||| | | | | ||| |||||||||||||||||||||||||| ||| |||||||||    
T  26356412 gttaaatatgtttttggtccctataaattagggacctttcaagtttagtccttacttaattttaattgttcttttagtcc 26356491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 861235 - 861301
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||||||| |||||||||||| | |   ||||||||||||||||||||||||||||||||    
T  861235 ttaaatatgtttttaatccctataaaatagggaacttttaagtttagtccttacttaattttaatag 861301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 3913148 - 3913222
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | |   |||||||||||||||||||||||||||||||||  |||||||||    
T  3913148 atatgtttttggtccctataaaattgggatcttttaagtttagtccttacttaattttaatagtgtttttagtcc 3913222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 3914826 - 3914752
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||| ||  |||||||||    
T  3914826 atatgtttttggtccctataaaattgggactttttaagtttagtccttacttaattttaattgtgcttttagtcc 3914752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 5086827 - 5086753
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | ||||||||||||||||||||||||| |||||||  |||||||||    
T  5086827 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattataatagtgtttttagtcc 5086753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 11400440 - 11400370
Alignment:
Q  168 aagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||||||||||||||||||||||||||||| |||||||||  | ||||| | |||||| ||||||||||||    
T  11400440 aagtttagtccttacttaattttaatagttattttagtccctataaaaaaattatgcactcagtattagtc 11400370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 12482199 - 12482121
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||||||||||||||||||||||||| | ||    ||||||||||| |||||||||||||||||||| | ||||||||    
T  12482199 gttaaatatgtttttagtccctataaagtagaaaacttttaagtttattccttacttaattttaataggtcttttagtc 12482121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 1821395 - 1821315
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||| ||||||||||||| | |  ||| | ||||||||||||| ||||||||||||| | ||||||||||    
T  1821395 gttaaatatgtttttggtccctataaaattgggaaattctgagtttagtccttatttaattttaataggttttttagtcct 1821315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 15720939 - 15721027
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | | | ||| ||||||| |||||||||||||||||||| | ||| |||||  |||||||    
T  15720939 gttaaatatgtttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaatagatttttaagtccctacaaaaa 15721027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 24958798 - 24958849
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  24958798 ttttaagtttagtccttacttaattttaatagtt-ttttagtccttacaaaaa 24958849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 28083350 - 28083288
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    |||| ||||| ||||||||||||| ||| |||||||||| |||||||||||||||| ||||||    
T  28083350 atatatttttggtccctataaaattgagacattttaagtatagtccttacttaattataatag 28083288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 1820869 - 1820945
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||| ||||| |||| |||||||| | | | ||||||||||||| |||||||||||||||||||| |||||||    
T  1820869 gttaaatatatttttggtcc-tataaaattgggaccttttaagtttagttcttacttaattttaatagttcttttagt 1820945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 8710255 - 8710178
Alignment:
Q  130 taaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||| ||||||||||||| | |   || |||||||||| |||||||||||||||||| | |||||||||    
T  8710255 taaatatgtttttggtccctataaaattgggaacttctaagtttagttcttacttaattttaataggttttttagtcc 8710178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 20897727 - 20897768
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  20897727 taagtttagtccttacttaattttaatagtttttttagtcct 20897768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 28476099 - 28476175
Alignment:
Q  131 aaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||| |||||||||||||  ||   || |||||||||||||||| |||||||||||| | |||||||||    
T  28476099 aaatatgtttttggtccctataaaattaagaacttataagtttagtccttacataattttaataggttttttagtcc 28476175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 29692317 - 29692246
Alignment:
Q  132 aatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttag 204  Q
    ||||| |||||| |||||||||||| ||  | |||||||||||||| ||||||||||||||||||| ||||||    
T  29692317 aatatattttta-tccctataaaattgaaaccttttaagtttagtctttacttaattttaatagttcttttag 29692246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 10915724 - 10915645
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| |     || |||||||| |||||||||||||||||||| | |||||||||    
T  10915724 gttaaatatgtttttggtccctataaaattggcaacttctaagtttaatccttacttaattttaataggttttttagtcc 10915645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 16465421 - 16465382
Alignment:
Q  166 ttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  16465421 ttaagtttagtccttacttaattttaatagttcttttagt 16465382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 29691790 - 29691865
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttag 204  Q
    |||||||||||||| ||| ||||||||| |||   || |||||||||||||||| |||||||||||| | ||||||    
T  29691790 ttaaatatgtttttggtctctataaaattgagaacttataagtttagtccttacataattttaataggttttttag 29691865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 30493126 - 30493039
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||| ||||||||||||| | |   ||||||||||| || ||||||||||||||||| | ||||| |||  |||||||    
T  30493126 ttaaatatgtttttggtccctataaaattgggaacttttaagtttattctttacttaattttaataggttttttactccatacaaaaa 30493039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 938728 - 938838
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    |||||||||| ||||  |||||||||||| | | |  |||||||||||| |||  ||||||||||||||| |||||||||  |||||||   | |||| |    
T  938728 gttaaatatgattttgatccctataaaattgggaccctttaagtttagtgcttttttaattttaatagttcttttagtccctacaaaaaatttgtgcact 938827  T
Q  228 cagtattagtc 238  Q
    |||||||||||    
T  938828 cagtattagtc 938838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 289765 - 289660
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||| |||| |||||||| | | | |||||||||||||  |||||||||| |||||||  |||||||||  | ||||  | ||||||||||||     
T  289765 atatgttttttgtccttataaaattgggaccttttaagtttagtttttacttaattataatagtgtttttagtccatataaaataattatgcattcagtt 289666  T
Q  233 ttagtc 238  Q
    ||||||    
T  289665 ttagtc 289660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 10915223 - 10915264
Alignment:
Q  165 tttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  10915223 tttaagtttagttcttacttaattttaatagttcttttagtc 10915264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 22731913 - 22731962
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||| |||||||||||||||||||| | |||||||||| |||||||    
T  22731913 taagtttaatccttacttaattttaataggttttttagtccttacaaaaa 22731962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 30661160 - 30661119
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  30661160 ttttaagtttagtccttacttaattttaataggttttttagt 30661119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 2958612 - 2958680
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    |||||||| |||||| |||||||||||  ||    ||||||||||||| ||||||||||||||||||||    
T  2958612 ttaaatatatttttactccctataaaaatgaaaacttttaagtttagttcttacttaattttaatagtt 2958680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 5974750 - 5974694
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttactt 184  Q
    ||||||||||||||| |||||| |||||| | | | |||||||||||||||||||||    
T  5974750 gttaaatatgtttttggtccctgtaaaattgggaccttttaagtttagtccttactt 5974694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 8709691 - 8709747
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttactt 184  Q
    ||||||||||||||| |||||| |||||| | | | |||||||||||||||||||||    
T  8709691 gttaaatatgtttttggtccctgtaaaattgggaccttttaagtttagtccttactt 8709747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 16736529 - 16736617
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||    |||||||||| | | | ||||| ||||| |||||||||||||||||||| | |||||||||  |||||||    
T  16736529 gttaaatatgtttttgaatcctataaaatagggaccttttatgtttaatccttacttaattttaataggttttttagtccctacaaaaa 16736617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 5087069 - 5087136
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||||||| || |||||||||| |     || |||||||||||||||||||||||||||||    
T  5087069 gttaaatatgtttttggttcctataaaattggaaacttctaagtttagtccttacttaattttaatag 5087136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 5974680 - 5974641
Alignment:
Q  168 aagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  5974680 aagtttagtccttacttaattttaataattcttttagtcc 5974641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 21108442 - 21108399
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||||||||||||||||| |||  |||||||||    
T  21108442 ttttaagtttagtccttacttaattttaacagtgcttttagtcc 21108399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 3375172 - 3375253
Alignment:
Q  128 gttaaatatgtttt--tagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||  | ||||||||||||| |||   ||||||||||| |||| |||||||||||||| |  |||||||||    
T  3375172 gttaaatatgttttatttgtccctataaaattgagattttttaagtttaatcctcacttaattttaataatgtttttagtcc 3375253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 157
Target Start/End: Original strand, 3807065 - 3807095
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatc 157  Q
    |||||||||||||||||||||||||||||||    
T  3807065 agttaaatatgtttttagtccctataaaatc 3807095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 26356949 - 26356888
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaatttt 190  Q
    |||||||||||||||  |||||||||||| | |  |||||||||||| |||||||||||||||    
T  26356949 gttaaatatgtttttgatccctataaaatag-gatattttaagtttaatccttacttaatttt 26356888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 30394826 - 30394764
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattt 189  Q
    |||||||||||||||| ||||| ||||||| |||   || |||||||||||| ||||||||||    
T  30394826 agttaaatatgtttttggtcccaataaaattgagaacttctaagtttagtccatacttaattt 30394764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 157
Target Start/End: Original strand, 6197808 - 6197837
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatc 157  Q
    ||||||||||||||||||||||||||||||    
T  6197808 gttaaatatgtttttagtccctataaaatc 6197837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 20977782 - 20977693
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaag-tttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| |||| ||||| || |||   ||||||| ||||||| |||||||||| |||||| | |||||||||  |||||||    
T  20977782 gttaaatatgtttttggtccttataatattgagaacttttaagttttagtctttacttaattataataggttttttagtccctacaaaaa 20977693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 3375672 - 3375616
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatact 220  Q
    |||||||||||||| ||| ||||||||||||| | ||||||| |  |||||||||||    
T  3375672 ttttaagtttagtcattatttaattttaatagcttttttagttcctacaaaaatact 3375616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 33518280 - 33518332
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||| |||||||||||||| |||||||||| | || ||||||| |||||||    
T  33518280 ttttaaatttagtccttacttgattttaataggttttatagtccttacaaaaa 33518332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 33745074 - 33744986
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| ||||||||  ||||||| ||||| | | | || ||||||||||| ||| ||||||||||||| | ||||| |||| |||||||    
T  33745074 gttaattatgttttccgtccctacaaaattgcgaccttgtaagtttagtctttatttaattttaatagcttttttaatccttacaaaaa 33744986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 8e-70; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 36 - 238
Target Start/End: Complemental strand, 36249361 - 36249160
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||        |||  ||||||||    
T  36249361 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttt-gttgggttaaata 36249263  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  36249262 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttgtagtccttacaaaaatactatgcactcagtatta 36249163  T
Q  236 gtc 238  Q
    |||    
T  36249162 gtc 36249160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 36368392 - 36368184
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    |||||||||||||| ||| || ||||||||||||||||| || |||| ||||||||| || |||||||||||||||||        |||  |||||||||    
T  36368392 cgttagcaaaatagatcctcgctgttaattgttgctgattgatcaaacggtgaagcatacatggatgccacatctgacttttttttgttgggttaaatat 36368293  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  36368292 gtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcagtattag 36368193  T
Q  237 tctctgctc 245  Q
    |||||||||    
T  36368192 tctctgctc 36368184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 36 - 238
Target Start/End: Original strand, 12367496 - 12367697
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||| |||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||        |||  ||||||||    
T  12367496 ccgttagcgaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctgacttttttt-gttgggttaaata 12367594  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||    
T  12367595 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcaggatta 12367694  T
Q  236 gtc 238  Q
    |||    
T  12367695 gtc 12367697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 30981508 - 30981749
Alignment:
Q  1 aaattttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgg 100  Q
    ||||||||||||||||||||||||||||       ||||||||||||||||||| || |||||||||||| |||| ||||||| |||||||||||| ||     
T  30981508 aaattttattaaatttttggtcccaacgtttttttccgttagcaaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacatga 30981607  T
Q  101 atgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtt 200  Q
    ||||||||||||||         ||  |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  30981608 atgccacatctgactttttt---tttggttaaatatgtttttagtccctgtaaaattgaggcattttaagtttagtccttacttaattttaataattgtt 30981704  T
Q  201 ttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||||| ||||||||||||||||   |||||||||||||||||    
T  30981705 ttagtccttacaaaaatactatgcacgtagtattagtctctgctc 30981749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 33709483 - 33709239
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||| |||| ||||       ||||||||||||||||||| || |||||||||||| |||| ||||||| |||||||||||||||    
T  33709483 aaattttattaaatttttgatccccaacgtttttttccgttagcaaaataggtcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtg 33709384  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  ||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  33709383 gatgccacatctgacttttttt-gttgggttaaatatgtttttaaccgctataaaattgaggcattttaagtttagtccttacttaattttaataattgt 33709285  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||||||||||| || ||||||||||| ||||    
T  33709284 tttagtccttacaaaaatactatgcactcggtattagtctcagctc 33709239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 38 - 245
Target Start/End: Original strand, 11999512 - 11999718
Alignment:
Q  38 gttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatg 137  Q
    ||||||||||||| ||  || |||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||        |||  ||||||||||    
T  11999512 gttagcaaaatagttcatcgctgttaattgttgttgattgagcaaacggtgaagcacatgtggatgccacatctgactttttct-gttgcgttaaatatg 11999610  T
Q  138 tttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagt 237  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  11999611 tttttagtccctataaaattgaggcattttaagtttagtccttacgtaattttaatagttgttttagtccttacaaaaatactatgcactaagtattagt 11999710  T
Q  238 ctctgctc 245  Q
    ||||||||    
T  11999711 ctctgctc 11999718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 33708114 - 33708320
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||||||| | |||||||||||||||         ||  ||||||||    
T  33708114 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacatagatgccacatctgactttttt---ttttgttaaata 33708210  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| || |||||||||    
T  33708211 tgtttttagtccctgtaaaattgaggcattttaagtttaatccttacttaattttaatagttgttttagtctttacaaaaatactatacactcagtatta 33708310  T
Q  236 gtctctgctc 245  Q
    ||| ||||||    
T  33708311 gtccctgctc 33708320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 37987194 - 37986988
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||  |  |||||||||||||||| |||||||||        |||  |||||||||    
T  37987194 cgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacag--aagcacacgtggatgctacatctgacttttttttgttaggttaaatat 37987097  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||| | ||||||    
T  37987096 gtttttagtccctgtaaaattgaggcattttaagtttagttcttacttaattttaatagttgttttagtccttgcaaaaatactatgcatttaatattag 37986997  T
Q  237 tctctgctc 245  Q
    |||||||||    
T  37986996 tctctgctc 37986988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 45 - 238
Target Start/End: Original strand, 37986011 - 37986203
Alignment:
Q  45 aaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttag 144  Q
    |||||||||| || ||||||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||        |||  |||||||||||||| ||    
T  37986011 aaataggtcctcgctgttaattgttactgattgagcaaacggtgaagcacacgtggatgtcacatctgactgttttt-gttgggttaaatatgttttcag 37986109  T
Q  145 tccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  37986110 tccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcattattagtc 37986203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 46595911 - 46596147
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||| ||||| ||||       |||||||||||||| |||| ||||||||||||||| |||| ||||||| |||||||||||| ||    
T  46595911 aaattttattaaattttttgtccccaacgtttttttccgttagcaaaataagtcctcgttgttaattgttgttgattgagcaaacggtgaagcacacatg 46596010  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||| ||| ||||||         ||  |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  46596011 gatgtcacgtctgacttttttttttt--gttaaatatgtttttagtccctgtaaaattgaggcattttaagtttagtccttacttaattttaataattgt 46596108  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||||| || |||||||||||||||| ||||||||||||    
T  46596109 tttagttcttacaaaaatactatgcactcagtattagtc 46596147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 29232182 - 29231945
Alignment:
Q  1 aaattttattaaatttttggt-cccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||||| |||||||       |||||||| |||||||||| || |||||||||||||| || |||||||  |||||||||| |||    
T  29232182 aaattttattaaatttttggttcccaacggttttttccgttagcgaaataggtcctcgctgttaattgttgctaattgagcaaacagtgaagcaca-gtg 29232084  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  ||||||||| |||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||| |||||    
T  29232083 gatgccacatctgacttttttttgttaggttaaatatatttttagtccctgtaaaattgagacattttaagtttagcccttacttaattttaattgttgt 29231984  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||||| ||||||||| |||||| ||||||||||||    
T  29231983 tttagtccttacaaaaatattatgcactcagtattagtc 29231945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 59 - 245
Target Start/End: Complemental strand, 12368708 - 12368524
Alignment:
Q  59 tgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcg 158  Q
    ||||||||||||||||| ||||||| |   ||||  |||| |||||||||||||||        |||  ||||||||||||||||||||||||||||| |    
T  12368708 tgttaattgttgctgattgagcaaacga--aagccaacgtagatgccacatctgacttttctttgttgggttaaatatgtttttagtccctataaaattg 12368611  T
Q  159 aggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  12368610 aggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatacattcaatattagtctctgctc 12368524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 36248091 - 36248334
Alignment:
Q  1 aaattttattaaatttttggtccca-acgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||||||||  |||       ||||||||||||||| ||| || |||||||||||| |||| ||||||| ||  || ||||||||    
T  36248091 aaattttattaaatttttggtccccgacgtttttttccgttagcaaaatagatcctcgctgttaattgttgttgattgagcaaacgg--aatcacacgtg 36248188  T
Q  100 gatgccacatctg-acnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttg 198  Q
    ||||||||||||| ||        |||  |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36248189 gatgccacatctgtacttttttttgttgggttaaatatgtttt-agtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttg 36248287  T
Q  199 ttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||| || || |||||||||||||||||||| ||||||||| |||||    
T  36248288 ttttggttcttacaaaaatactatgcattcaatattagtctatgctc 36248334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 39 - 245
Target Start/End: Original strand, 36362275 - 36362478
Alignment:
Q  39 ttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgt 138  Q
    ||||||||||| |||  || |||||||| |||||||| ||||||| |||||||||||| | |||||||||| ||||         ||  |||||||||||    
T  36362275 ttagcaaaataagtcatcgctgttaattattgctgattgagcaaacggtgaagcacacatagatgccacatttgactttttt---tttggttaaatatgt 36362371  T
Q  139 ttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  36362372 ttttagtccccgtaaaattgaggcattttaagtttagtccttacttaattttagtagttgttttagtccttacaaaaatactatgcactcagtattagtc 36362471  T
Q  239 tctgctc 245  Q
     ||||||    
T  36362472 cctgctc 36362478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 534114 - 533904
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    ||||||||||||| |||| || |||||||| |||||||| ||||||| |||||| |||||||||||||||||||||||        |||  |||||||||    
T  534114 cgttagcaaaataagtcctcgctgttaatttttgctgatggagcaaacggtgaaacacacgtggatgccacatctgacttttttttgttgggttaaatat 534015  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatact---atgcattcagtat 233  Q
    ||||||| ||  |||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||   ||||| |||||||    
T  534014 gtttttaatca-tataaaattgaggcattttaagtttaacccttacttaattttaatagttattttagtccttacaaaaatactatgatgcactcagtat 533916  T
Q  234 tagtctctgctc 245  Q
    ||||||||||||    
T  533915 tagtctctgctc 533904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 15054730 - 15054493
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| || |       |||||||| ||| |||||  || ||||||||||||||||   |||||| |||||||||||||||    
T  15054730 aaattttattaaatttttggtccccaatgtttttttccgttagcgaaagaggtcatcgctgttaattgttgctgactcagcaaacggtgaagcacacgtg 15054631  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  |||||||||||||||| || ||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  15054630 gatgccacatctgacttttttt-gttgggttaaatatgtttttaatctctataaaattgaggcattttaagtttagtccttatttaattttaataattgt 15054532  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    | |||| || |||||||||||||||| ||||||||||||    
T  15054531 tctagttcttacaaaaatactatgcactcagtattagtc 15054493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 201
Target Start/End: Complemental strand, 30982859 - 30982694
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||   |||||||||||||||| || ||||||| |||||||||||||||||||||| |||||||        |||  ||||||||    
T  30982859 ccgttagcaaaataggtcattgttgttaattgttgctaattgagcaaacggtgaagcacacgtggatgccatatctgacttttttttgttgggttaaata 30982760  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttt 201  Q
      ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30982759 aatttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttt 30982694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 29231209 - 29231323
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||    
T  29231209 gttaaatatgtttttagtccctataaaattgagacattttaagtttagtccttacttaattttaatagttgttttagtccttataaaaatattatgcatt 29231308  T
Q  228 cagtattagtctctg 242  Q
    || ||||||||||||    
T  29231309 caatattagtctctg 29231323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 215
Target Start/End: Original strand, 15053440 - 15053617
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||| ||| || ||||||||||| ||||| |||||||  |  ||||||| ||||||||||||||||||        |||  ||||||||    
T  15053440 ccgttagcaaaatagctcctcgctgttaattgttactgattgagcaaacag--aagcacatgtggatgccacatctgacttttttttgttgggttaaata 15053537  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaa 215  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  15053538 tgtttttagtccctataaaattgaggcattttcagtttagttcttacttaattttaatagttgtttttgtccttacaaaa 15053617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 46597143 - 46597069
Alignment:
Q  171 tttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  46597143 tttagtccttacttaattttaatagttgttttagtccttacaaaaatactatccattcagtattagtctcagctc 46597069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 46517485 - 46517416
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    ||||||||||||||| ||||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  46517485 gttaaatatgtttttcgtccctataaaattgggacattttaagtttagtccttacttaattttaatagtt 46517416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 19791123 - 19791201
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||||||||||| | |||||||||| | | | |||||||||||||||||||||||||||||||||| ||||||||    
T  19791123 gttaaatatgtttttatttcctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttagtc 19791201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 51840106 - 51840180
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||||  |||||||||    
T  51840106 atatgtttttggtccctataaaattgaaacattttaagtttagtccttacttaattttaatagtgattttagtcc 51840180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 41332015 - 41331946
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    ||||||||| |||||||| |||||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  41332015 gttaaatatatttttagttcctataaaattgagaccttttaagtttagtccttacttaattttaatagtt 41331946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 30742740 - 30742660
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||||||||||||||||| |||   || |||||||| |||||||||||||||||||||| ||| ||||||    
T  30742740 gttaaatatgtttttagtccctataaaattgagagtttctaagtttaatccttacttaattttaatagttttttaagtcct 30742660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 2058961 - 2059040
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||||||||||| |||| | | | |||||||||||||||||| ||||||||||||||  |||||||||    
T  2058961 gttaaatatgtttttagtccctatgaaattgggaccttttaagtttagtccttatttaattttaatagtacttttagtcc 2059040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 13501089 - 13501168
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||| |||||||||    
T  13501089 gttaaatatgtttttggtccctataaaataggggtctttcaagtttagtccttacttaattttaatggttcttttagtcc 13501168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 48410005 - 48410084
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | | |||||||||||| ||||||||||||||||||| ||  |||||||||    
T  48410005 gttaaatatgtttttggtccctataaaattgggacattttaagttttgtccttacttaattttaatggtgcttttagtcc 48410084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 11396921 - 11396995
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||| ||| ||| | |||||||||||||||||||||||||||||||||  |||||||||    
T  11396921 atatgtttttggtccctatacaattgagaccttttaagtttagtccttacttaattttaatagtgcttttagtcc 11396995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 25351845 - 25351919
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||  |||||||||||| ||| | |||||||||||||||||||||||||||||||||  |||||||||    
T  25351845 atatgtttttgatccctataaaattgagaccttttaagtttagtccttacttaattttaatagtgcttttagtcc 25351919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 27551901 - 27551827
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| ||| | ||||||||||||||||||||||||| |||||||  |||||||||    
T  27551901 atatgtttttggtccctataaaattgagaccttttaagtttagtccttacttaattataatagtgtttttagtcc 27551827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 21794751 - 21794663
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | |   || ||||||||||||||||||||||||||||| | ||| |||||| |||||||    
T  21794751 gttaaatatgtttttggtccctataaaattgggaacttataagtttagtccttacttaattttaataggtttttaagtccttacaaaaa 21794663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 26805368 - 26805456
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | |   || ||||||||||||||||||||||||||||| | ||||| |||| |||||||    
T  26805368 gttaaatatgtttttggtccctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttaatccttacaaaaa 26805456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 26805903 - 26805823
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||  ||||||||||||  || | ||||||||||||| |||||||||||||||||||  ||||||||||    
T  26805903 gttaaatatgttttttatccctataaaattcagaccttttaagtttagttcttacttaattttaatagtatttttagtcct 26805823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 21794294 - 21794369
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    |||| |||| ||||| ||||| ||||||| | ||| |||||||||||||||||||||||||||||||||| |||||    
T  21794294 gttagatatatttttggtcccgataaaattggggccttttaagtttagtccttacttaattttaatagttctttta 21794369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 47009040 - 47008961
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||| |||||||||||||   | | |||||||||| ||||||||||| ||||||||||| ||||||||||    
T  47009040 ttaaatatgtttttggtccctataaaattaggaccttttaagttttgtccttacttacttttaatagttcttttagtcct 47008961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 52881487 - 52881558
Alignment:
Q  135 atgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||||||  ||||||||    
T  52881487 atgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaatagtgcttttagtc 52881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 25352852 - 25352778
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | |   |||||||||||||||||||||||||||||||||  |||||||||    
T  25352852 atatgtttttggtccctataaaattgtgagcttttaagtttagtccttacttaattttaatagtgcttttagtcc 25352778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 42972382 - 42972316
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaata 194  Q
    ||||| ||||||||| ||||||||||||| |||   |||||||||||||||||||||||||||||||    
T  42972382 gttaattatgtttttggtccctataaaattgagaacttttaagtttagtccttacttaattttaata 42972316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 49767575 - 49767649
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | ||||||||||||||||||||||||| |||||||  |||||||||    
T  49767575 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattataatagtgtttttagtcc 49767649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 51338351 - 51338425
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| |    ||||||||||||||||||||||||||||||||||  |||||||||    
T  51338351 atatgtttttggtccctataaaattggaatattttaagtttagtccttacttaattttaatagtgtttttagtcc 51338425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 12897496 - 12897391
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||  ||||||||||||| |   | |||||||||||||||||||||||||||||||||  |||||||||  | ||||| | |||||| |||||     
T  12897496 atatgttttcggtccctataaaattggaaccttttaagtttagtccttacttaattttaatagtaattttagtccatataaaaaaattatgcactcagtt 12897397  T
Q  233 ttagtc 238  Q
    ||||||    
T  12897396 ttagtc 12897391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 48218256 - 48218151
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagta 232  Q
    |||||||||| ||||||| ||||| | |   |||||||||||||||||||||||||||||||||  |||||||||  | ||||| ||||| |||||| |     
T  48218256 atatgtttttggtccctaaaaaattgggatcttttaagtttagtccttacttaattttaatagtgtttttagtccatataaaaaaactatccattcaatt 48218157  T
Q  233 ttagtc 238  Q
    ||||||    
T  48218156 ttagtc 48218151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 33707246 - 33707326
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||| || |||||||||| ||    ||||||||||| |||||||||||||||||||||| ||| ||||||    
T  33707246 gttaaatatgtttttggttcctataaaattgaaaacttttaagtttaatccttacttaattttaatagttttttcagtcct 33707326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 52493416 - 52493500
Alignment:
Q  132 aatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||| ||||||||| |||||||| ||| | |||||| |||| |||||||||||||||||| ||| |||||||||  |||||||    
T  52493416 aatatgattttagtccttataaaatggagaccttttaattttaatccttacttaattttaatggttcttttagtccctacaaaaa 52493500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 241
Target Start/End: Original strand, 30719361 - 30719476
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc-tcacaaaaatactatgca 225  Q
    |||||||||||||||| |||||||||| || | ||  ||| |||||||||||| | ||||||||||| ||| ||||||||| | | ||||| | | ||||    
T  30719361 agttaaatatgtttttggtccctataatataggggtttttcaagtttagtcctaatttaattttaatggttcttttagtccttaaaaaaaaaagtctgca 30719460  T
Q  226 ttcagtattagtctct 241  Q
     |||||||||||||||    
T  30719461 ctcagtattagtctct 30719476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 35188584 - 35188521
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaatttta 191  Q
    ||||||||||||||| |||||||||||||||||   || |||||||| ||||||||||||||||    
T  35188584 gttaaatatgtttttggtccctataaaatcgagaacttataagtttaatccttacttaatttta 35188521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 35531204 - 35531125
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||| ||||||||||||| | |   || ||||||||||||||||||||||||||||  | ||||||||||    
T  35531204 ttaaatatgtttttggtccctataaaattgggaacttctaagtttagtccttacttaattttaataagttttttagtcct 35531125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 48410561 - 48410483
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatc-gaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||| |||||||||||||  ||  | |||||||||||||||||||||||||||||||| | |||||||||    
T  48410561 ttaaatatgtttttggtccctataaaatttgaaac-ttttaagtttagtccttacttaattttaatagcttttttagtcc 48410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 51561223 - 51561302
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | | | ||| || |||||||||| |||||||||||| ||| |||||||||    
T  51561223 gttaaatatgtttttggtccctataaaatagggacctttcaactttagtccttgcttaattttaatggttcttttagtcc 51561302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 51561759 - 51561680
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||| |||||||||||||||||||||||   ||  ||| |||||||||||||| ||||||||||| ||| |||||||||    
T  51561759 gttaattatgtttttagtccctataaaataagggtctttcaagtttagtccttaattaattttaatggttcttttagtcc 51561680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 35530707 - 35530780
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| | ||||| | | |||| ||||||||||||    
T  35530707 ttttaagtttagtcattacttaattttaatagtttttttagtcctta-aaaaaaattctgcactcagtattagtc 35530780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 51340003 - 51339929
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| |||| |||||||| ||    |||||||||||||||||||||||||||||||||  |||||||||    
T  51340003 atatgtttttggtccttataaaattgaaatcttttaagtttagtccttacttaattttaatagtgtttttagtcc 51339929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 52010759 - 52010685
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | ||||||||||| |||||||||||||| ||||||  |||||||||    
T  52010759 atatgtttttggtccctataaaattgggaccttttaagtttattccttacttaatttcaatagtgtttttagtcc 52010685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 21090938 - 21091003
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaata 194  Q
    |||||||||||||| |||| |||||||| |    ||||||||||||||||||||||||||||||||    
T  21090938 ttaaatatgtttttggtccttataaaattggaaaattttaagtttagtccttacttaattttaata 21091003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 5430441 - 5430521
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||| ||||||||| ||||||||| |  |  ||||||||||| | ||||||||||||||||| || ||||||||||    
T  5430441 gttaaatatatttttagtctctataaaattggagacttttaagtttaattcttacttaattttaataatttttttagtcct 5430521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 10041119 - 10041199
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaata-gttgttttagtcct 208  Q
    |||||||||||||| |||| |||||| | |||   || |||||||||||||||||||||||||||| ||| ||||||||||    
T  10041119 ttaaatatgtttttggtccttataaagttgagaacttctaagtttagtccttacttaattttaatatgtttttttagtcct 10041199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 47008553 - 47008641
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | |   || |||||| | |||||||||||||||||||| | |||||||||  |||||||    
T  47008553 gttaaatatgtttttggtccctataaaattgggaacttctaagttcaatccttacttaattttaataggttttttagtccctacaaaaa 47008641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 51841378 - 51841298
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctctgct 244  Q
    |||||||||||||||||||||||||||||||||  ||||||| |  | ||||| | |||||| ||||| |||||| |||||    
T  51841378 ttttaagtttagtccttacttaattttaatagtgcttttagttcatataaaaaaattatgcactcagttttagtccctgct 51841298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 20357352 - 20357273
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||| |||||||||| |||   || || ||||| | |||||||||||||||||||| |||||||||    
T  20357352 gttaaatatggttttagttcctataaaattgagaacttctatgtttatttcttacttaattttaatagtttttttagtcc 20357273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 20562603 - 20562682
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||| |||||||||| |||   || || ||||| | |||||||||||||||||||| |||||||||    
T  20562603 gttaaatatggttttagttcctataaaattgagaacttctatgtttatttcttacttaattttaatagtttttttagtcc 20562682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 28701298 - 28701255
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  28701298 ttttaagtttagtccttacttaattttaataggttttttagtcc 28701255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 52882703 - 52882640
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagt 196  Q
    |||||||||| ||||||||||||| | |   ||||||||||| |||||||||||||||||||||    
T  52882703 atatgttttttgtccctataaaattgggatcttttaagtttaatccttacttaattttaatagt 52882640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 10041613 - 10041562
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||| |||||||    
T  10041613 ttttaagtttagtgcttactaaattttaatagtt-ttttagtccttacaaaaa 10041562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 13971072 - 13971116
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||    
T  13971072 tttttagtttagtccttacttaattttaatagatattttagtcct 13971116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 13501583 - 13501544
Alignment:
Q  168 aagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  13501583 aagtttagtccttacttaattttaatggtttttttagtcc 13501544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 26020776 - 26020733
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||    
T  26020776 ttttaagtttaatccttacttaatttgaatagttcttttagtcc 26020733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 27550683 - 27550746
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagt 196  Q
    |||||||||| |||||||||||||   |   ||||||||||||||||||||||||| |||||||    
T  27550683 atatgtttttggtccctataaaattaggattttttaagtttagtccttacttaattataatagt 27550746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 28700837 - 28700916
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||  ||||||| |||| | |   |||||| ||||||||||||| ||||||||||||| |||| ||||    
T  28700837 gttaaatatgtttttgatccctattaaattgggaacttttaattttagtccttactaaattttaatagttcttttggtcc 28700916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 33707780 - 33707702
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||| |||||||  || ||||||||| |   |||| | ||||||||||||||||||||||||||||| |||||||||    
T  33707780 gttaaatttgttttttttctctataaaattgtaacattctgagtttagtccttacttaattttaatagtt-ttttagtcc 33707702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 13083368 - 13083406
Alignment:
Q  168 aagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  13083368 aagtttagtcctcacttaattttaatagtttttttagtc 13083406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 31400103 - 31400213
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||| ||||||||  ||||||| ||||| | | | || ||||||||||||||| ||||||||||||| | ||||| | || |||||||   |||||| |    
T  31400103 gttaattatgttttcggtccctacaaaattgcgaccttgtaagtttagtccttatttaattttaatagcttttttaattcttacaaaaaatttatgcact 31400202  T
Q  228 cagtattagtc 238  Q
    || ||||||||    
T  31400203 caatattagtc 31400213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 2059765 - 2059676
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||| |||||| ||||||||| |||||||| |||   || |||||||| || |||||||||||||||||   |||||||||  |||||||    
T  2059765 agttgaatatgattttagtccttataaaatagagaacttctaagtttaatctttacttaattttaataggatttttagtccctacaaaaa 2059676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 31024424 - 31024391
Alignment:
Q  170 gtttagtccttacttaattttaatagttgtttta 203  Q
    |||||||||||||||||||||||||||| |||||    
T  31024424 gtttagtccttacttaattttaatagttttttta 31024391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 31400598 - 31400549
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||||||||||||||||| | ||||| |||  |||||||    
T  31400598 taagtttagtccttacttaattttaatagcttttttaatccctacaaaaa 31400549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 46517087 - 46517136
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  46517087 taagtttaatccttacttaattttaatagatattttagtccctacaaaaa 46517136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 26020316 - 26020344
Alignment:
Q  167 taagtttagtccttacttaattttaatag 195  Q
    |||||||||||||||||||||||||||||    
T  26020316 taagtttagtccttacttaattttaatag 26020344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 30719898 - 30719810
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||| ||||  |||||||||||| | | | ||| ||||| | |||||| ||||||||||||| | |||||||||  |||||||    
T  30719898 gttaaatatgattttgatccctataaaatagggacctttcaagttcaatccttatttaattttaatagattttttagtccctacaaaaa 30719810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 33752870 - 33752898
Alignment:
Q  128 gttaaatatgtttttagtccctataaaat 156  Q
    |||||||||||||||||||||||||||||    
T  33752870 gttaaatatgtttttagtccctataaaat 33752898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 35188065 - 35188144
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||  ||| |||||||| | | | ||| ||||| |||  ||||||||||||||||||| ||||||||||    
T  35188065 gttaaatatgttttttatccttataaaattgcgacttttaaagtt-agtaattacttaattttaatagtttttttagtcct 35188144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 36 - 242
Target Start/End: Original strand, 33624580 - 33624786
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||||||||| |||| || ||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||        |||  ||||||||    
T  33624580 ccgttagcaaaatatgtcctcgctgttaattgttgctgattgagcaaacggtgaaacacacgtggatgccacatctgacatttttttgttgtgttaaata 33624679  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||    
T  33624680 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaataccatgcactcaatatta 33624779  T
Q  236 gtctctg 242  Q
    |||||||    
T  33624780 gtctctg 33624786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 36 - 241
Target Start/End: Original strand, 46330591 - 46330796
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||| ||||||||||||| || ||||||||||||||||  |||||||||||||||||||| |||||||||||||||||        |||  ||||||||    
T  46330591 ccgttggcaaaataggtcctcgctgttaattgttgctgaatgagcaaatggtgaagcacacatggatgccacatctgacttttttttgttgggttaaata 46330690  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||| |||||    
T  46330691 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttataaaaatactatgcactcaatatta 46330790  T
Q  236 gtctct 241  Q
    ||||||    
T  46330791 gtctct 46330796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 33625943 - 33625701
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       ||||||||||||||||| | || |||||||||||| |||| ||||||| |||||||||||| ||    
T  33625943 aaattttattaaatttttggtccccaacgtttttttccgttagcaaaataggttctcgctgttaattgttgttgattgagcaaacggtgaagcacacatg 33625844  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||         ||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  33625843 gatgccacatctgacttttttttttt--gttaaatatgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatcgttgt 33625746  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| || ||||||||||| | |||||||||||| ||||||    
T  33625745 tttagtccttac-aaaatactatgtactcagtattagtccctgctc 33625701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 46331904 - 46331661
Alignment:
Q  1 aaattttattaaatttttggtcccaa-cgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||| ||| ||       | ||||||||||||||||| || ||||||||||| ||||| ||||||| |||||||||||| ||    
T  46331904 aaattttattaaatttttggtctcaaacgtttttttcagttagcaaaataggtcctcgctgttaattgttactgattgagcaaacggtgaagcacacatg 46331805  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||         ||  |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||| |    
T  46331804 gatgccacatctgacttttttttttt--gttaaatatgtttttagtccctgtaaaattgaggcattttaagtttagtctttacttaattttaatagttat 46331707  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||    
T  46331706 tttagtccttacaaaaatactatgcactcagtattagtccctgctc 46331661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 38200106 - 38199869
Alignment:
Q  1 aaattttattaaatttttggtcccaa-cgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||||| ||       |||| | | |||||||||| | |||||||||||||||||| ||||||| |||||||||||||||    
T  38200106 aaattttattaaatttttggtcccaaacgttcttttccgtcatcgaaataggtcctccttgttaattgttgctgattgagcaaacggtgaagcacacgtg 38200007  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||| ||||||||||        |||  ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38200006 gatgtcacatctgacttttttt-gttgggttaaatatatttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgt 38199908  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||||| ||||||||||||| || | ||||||||||    
T  38199907 tttagtccttacaaaaatactatacacttagtattagtc 38199869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 38198856 - 38199063
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||| ||||||| || |||||||||||| |||| ||||||| |   |||| |||||||||| ||||||||||        |||  ||||||||    
T  38198856 ccgttagcaaagtaggtcctcgctgttaattgttgttgattgagcaaacga--aagcgcacgtggatgtcacatctgacttttttttgttgggttaaata 38198953  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  38198954 tgtttttagtccctataaaattgaggcattttaagtttagttcttacttaattttaatagttgttttagtccttacaaaaatactatgcattcaatatta 38199053  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  38199054 gtctctgctc 38199063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 15131829 - 15131631
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||| ||| || ||||||||||||||||| ||||||| |||||||||||| |||||||||||| ||||         ||  ||||||||    
T  15131829 ccgttagcaaaatagatcctcgctgttaattgttgctgattgagcaaacggtgaagcacacatggatgccacatatgactttttt---ttttgttaaata 15131733  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||    
T  15131732 tgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatcgttgttttagtccttacaaaaataccatgcactcagtatta 15131633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 37 - 245
Target Start/End: Original strand, 44166938 - 44167142
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    |||||||||||||| ||| || || ||||||||| |||| |||||||  ||||||||||| ||||||||||||||||          ||  |||||||||    
T  44166938 cgttagcaaaatagatcctcgctgataattgttgttgattgagcaaacagtgaagcacacatggatgccacatctgatttttt----tttggttaaatat 44167033  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44167034 gtttttagtccctgtaaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcattcagtattag 44167133  T
Q  237 tctctgctc 245  Q
    || ||||||    
T  44167134 tccctgctc 44167142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 36 - 242
Target Start/End: Complemental strand, 46044795 - 46044589
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||| ||| ||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||        |||   |||||||    
T  46044795 ccgttagcaaaatagatcctcgtggttaattgttgctgattgagcaaacggtgaagcacatgtggatgccacatctaacttttttttgttagattaaata 46044696  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||| | |||||||  ||||| |||||||||    
T  46044695 tgtttttagtccctataaaattgaggtattttaagtttagtccttacttaattttaatagttgtttcagtccttataaaaatatcatgcactcagtatta 46044596  T
Q  236 gtctctg 242  Q
    |||||||    
T  46044595 gtctctg 46044589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 37 - 245
Target Start/End: Original strand, 45957901 - 45958106
Alignment:
Q  37 cgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatat 136  Q
    |||||||||||||||||| || |||||||||||||| || |||||||   |||| ||||| |||||||||||||||||         ||  |||||||||    
T  45957901 cgttagcaaaataggtcctcgctgttaattgttgcttattgagcaaacattgaaccacacatggatgccacatctgactttttt---tttggttaaatat 45957997  T
Q  137 gtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattag 236  Q
    ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  45957998 gtttttagtccctgtaaaattgaggcattttaagtttagtgcttacttaattttaatagttgttttagtccttacaaaaatactatgcactcaatattag 45958097  T
Q  237 tctctgctc 245  Q
    |||||||||    
T  45958098 tctctgctc 45958106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 36 - 241
Target Start/End: Complemental strand, 43084339 - 43084140
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || |||||||||||| |||| || |||| ||  ||||| ||||||||||||||||||||        |||  ||||||||    
T  43084339 ccgttagcaaaataggtcctcgctgttaattgttgttgattgaacaaacgg--aagcatacgtggatgccacatctgacttttttttgttgggttaaata 43084242  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  43084241 tgtttttagtccctgtaaaattgaggcattttaagtttagtcctta----attttaatagttgttttagtccttacaaaaatactatgcattcaatatta 43084146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 38 - 242
Target Start/End: Complemental strand, 45959159 - 45958955
Alignment:
Q  38 gttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatg 137  Q
    ||||||||| ||||| | | ||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||         ||  ||||||||||    
T  45959159 gttagcaaactaggttctccttgtttattgttgctgattgaacaaacggtgaagcacacgtggatgccacatctgacttttttttattgggttaaatatg 45959060  T
Q  138 tttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagt 237  Q
    |||||||||  |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| |||||| |||||||||||    
T  45959059 tttttagtctatataaaattggggcattttaagtttattccttacttaattttaatagttgttttagtccttagaaaaataatatgcactcagtattagt 45958960  T
Q  238 ctctg 242  Q
    |||||    
T  45958959 ctctg 45958955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 46043425 - 46043660
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       ||||||||||||||||||  || |||||| ||||| |||| ||||||| ||| |||||||| ||    
T  46043425 aaattttattaaatttttggtccccaacgttttt--ccgttagcaaaataggtcatcgctgttaactgttgttgattgagcaaacggtaaagcacacatg 46043522  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaa-ttttaatagttg 198  Q
    |||||||||||||||         ||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  46043523 gatgccacatctgactctt-----ttttgttaaatatgtttttagtccctataaaattgaggcattttaagtttagtccttacttaatttttaatcgttg 46043617  T
Q  199 ttttagtcctcacaaaaatactatgcattcagtattagtctct 241  Q
    |||||||||| ||||||||||||| || ||| |||||||||||    
T  46043618 ttttagtccttacaaaaatactatacactcaatattagtctct 46043660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 3495416 - 3495650
Alignment:
Q  1 aaattttattaaatttttggtccca-acgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||||||||  |||       ||||||||||||||||||  || ||||||||||||||||| ||||||| ||  |||||||| |     
T  3495416 aaattttattaaatttttggtccccgacgtttttttccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacgg--aagcacaccta 3495513  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  |||||||||||||  ||| |||||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  3495514 gatgccacatctgacttttttttgttgggttaaatatgttt--agttcctataaaattgaggcattttaaacttagtccttacttaattttaatagttgt 3495611  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    ||||||||| ||||||||| |||||||||| ||||||||    
T  3495612 tttagtccttacaaaaataatatgcattcaatattagtc 3495650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 43083086 - 43083321
Alignment:
Q  1 aaattttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgg 100  Q
    ||||||||||||||||||||||| |||        |||||||  |||||| ||  || ||||||||||||||||| || |||| ||||||||||||||||    
T  43083086 aaattttattaaatttttggtcctaacatttttttccgttagtgaaatagatcttcgctgttaattgttgctgattgaacaaacggtgaagcacacgtgg 43083185  T
Q  101 atgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtt 200  Q
    || |||||||||||        |||   ||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  43083186 ataccacatctgactttttt--gttggattaaatatgtttttaatccctataaaattgagacattttaagtttagtccttacttaattttaatagttgtt 43083283  T
Q  201 ttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||  ||| ||||||||||||| || ||| ||||||||    
T  43083284 ttaacccttacaaaaatactatacactcactattagtc 43083321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 36 - 238
Target Start/End: Complemental strand, 3496683 - 3496484
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||| |||||||||  || |||||||||||  | || ||||||| ||||||||||||||||||| ||||||| ||        | |  ||||||||    
T  3496683 ccgttagcgaaataggtcatcgctgttaattgttatt-attgagcaaacggtgaagcacacgtggatgtcacatct-actttttttgg-tgggttaaata 3496587  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||    
T  3496586 tgtttttagtccctataaaattgaggtattttaagttttgtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactaagtatta 3496487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 6588571 - 6588651
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||||||||||||||||| | | | ||||||||||||| |||||||||||||||||||| ||||||||||    
T  6588571 gttaaatatgtttttagtccctataaaattgggaccttttaagtttagttcttacttaattttaatagttcttttagtcct 6588651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 12908565 - 12908643
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||| ||||||||||||| ||| | || ||||||||||||||||||||||||||||||| |||||||||    
T  12908565 ttaaatatgtttttggtccctataaaattgagaccttctaagtttagtccttacttaattttaatagtttttttagtcc 12908643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44168318 - 44168205
Alignment:
Q  1 aaattttattaaatttttggtcccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtgg 100  Q
    ||||||||||||||||||| ||||||||       ||||| ||||||||||||| || | ||||||||||||||| ||||||| |||||||||||| ||     
T  44168318 aaattttattaaatttttgatcccaacgtttttttccgttggcaaaataggtcctcgctattaattgttgctgattgagcaaacggtgaagcacacatga 44168219  T
Q  101 atgccacatctgac 114  Q
    ||| ||||||||||    
T  44168218 atgtcacatctgac 44168205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 21109759 - 21109680
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||||||| | |||||| | | | |||||||||||||||||||||||||||||||||| |||||||||    
T  21109759 gttaaatatgtttttagtccttgtaaaattgggaccttttaagtttagtccttacttaattttaatagttcttttagtcc 21109680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 15130638 - 15130707
Alignment:
Q  171 tttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctc 240  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||    
T  15130638 tttagtccgtacttaattttaatagttgttttagtccttacaaaaataccatgcacccagtattagtctc 15130707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 18058890 - 18059003
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||||||||| |||||||||||||  ||   ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||| |  | | || |    
T  18058890 gttaaatatgtttttggtccctataaaattaagatcttttaagttcagtgcttacttaattttaatagttcttttagtccccacaaaatttttctacaat 18058989  T
Q  228 cagtattagtctct 241  Q
    ||||||||||||||    
T  18058990 cagtattagtctct 18059003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 47792264 - 47792176
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | |   || ||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  47792264 gttaaatatgtttttggtccctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttagtccttacaaaaa 47792176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 27728169 - 27728090
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||| ||||| ||||||||||||| | | | ||||||||||| |||||||||||||||||||||| |||||||||    
T  27728169 gttaaatatatttttggtccctataaaattgggacgttttaagtttaatccttacttaattttaatagttcttttagtcc 27728090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 38158833 - 38158912
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | ||| ||| ||||||||||||||||||||||||||  || |||||||||    
T  38158833 gttaaatatgtttttggtccctataaaataggggcctttcaagtttagtccttacttaattttaatgattcttttagtcc 38158912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 43574123 - 43574202
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||||||||||||||| | ||| | |||||||| || |||||||||| ||||||||||| |||||||||    
T  43574123 gttaaatatgtttttagtccctataaagttgagaccttttaagtataatccttacttagttttaatagttcttttagtcc 43574202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 1260024 - 1260134
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    |||||||||||||||  |||||||||||| | |  |||||||||||||||||| |||||||||||| ||| |||||||||  | |||||   ||||||||    
T  1260024 gttaaatatgtttttgttccctataaaattgggatattttaagtttagtccttgcttaattttaattgtttttttagtccctataaaaaatttatgcatt 1260123  T
Q  228 cagtattagtc 238  Q
    |||| ||||||    
T  1260124 cagttttagtc 1260134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 8832597 - 8832671
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | |||||||||||||||||||||||||||||||||| |||| ||||    
T  8832597 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattttaatagttcttttggtcc 8832671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 22378869 - 22378756
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt-cctcacaaaaatactatgcat 226  Q
    ||||||||||||||| ||||||||||||| ||||  ||| ||||||| |||||||||||||||||||||| ||||| | ||| | ||||| | | ||||     
T  22378869 gttaaatatgttttt-gtccctataaaatagaggtctttcaagtttaatccttacttaattttaatagttcttttaatccctaaaaaaaaaattctgcac 22378771  T
Q  227 tcagtattagtctct 241  Q
    |||||||||||||||    
T  22378770 tcagtattagtctct 22378756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 25270502 - 25270576
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||| ||||||||||| ||   ||||||||||||||||||||||||||||||||||  |||||||||    
T  25270502 atatgtttttagaccctataaaattgaaatattttaagtttagtccttacttaattttaatagtgtttttagtcc 25270576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 29156377 - 29156259
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcac-aaaaatactatgcat 226  Q
    |||||||||||||| |||||||||||||| ||| | |||||||||||||| |||| ||||| |||| ||| ||||||| || || ||||| | | ||||     
T  29156377 gttaaatatgttttaagtccctataaaattgagaccttttaagtttagtctttacataattataatggttcttttagttcttactaaaaaaaatttgcac 29156278  T
Q  227 tcagtattagtctctgctc 245  Q
    |||||||||||||| ||||    
T  29156277 tcagtattagtctcggctc 29156259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 12932967 - 12932894
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    |||||||||||||| |||||||||||||  || | || ||||||||||||||||||||||||||||||| ||||    
T  12932967 ttaaatatgtttttggtccctataaaattaagaccttctaagtttagtccttacttaattttaatagttctttt 12932894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 15130539 - 15130645
Alignment:
Q  39 ttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgt 138  Q
    |||||||||||||||  || ||||||||||||||||| ||||||| |||||||  |||||||||||||||||||||        |||  |||||||||||    
T  15130539 ttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacggtgaag--cacgtggatgccacatctgacttttttttgttgtgttaaatatgt 15130636  T
Q  139 ttttagtcc 147  Q
    |||||||||    
T  15130637 ttttagtcc 15130645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 6331314 - 6331226
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | | | ||| ||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  6331314 gttaaatatgtttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaatagattttttagtcccaacaaaaa 6331226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 37537370 - 37537450
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||| |||| |||||||| |||   ||||||||| |||||||||||||||||||||||  ||||||||||    
T  37537370 gttaaatatgtttttggtccttataaaattgagattttttaagttcagtccttacttaattttaatagtatttttagtcct 37537450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 44080842 - 44080918
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttag 204  Q
    |||||||||||||||| |||||||||||| ||| | || ||||||||||||||| |||||||||||| || ||||||    
T  44080842 gttaaatatgtttttaatccctataaaattgagaccttctaagtttagtccttatttaattttaataatttttttag 44080918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 7238988 - 7238909
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| || |||||||||| |     |||||||||||||||||||||||||||||||||| |||||||||    
T  7238988 gttaaatatgtttttggttcctataaaattggaatcttttaagtttagtccttacttaattttaatagttcttttagtcc 7238909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 14990957 - 14990878
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | | | || |||||||| ||||||| |||||||||||||| |||||||||    
T  14990957 gttaaatatgtttttggtccctataaaattgggaccttctaagtttaatccttacctaattttaatagttcttttagtcc 14990878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 15420568 - 15420489
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||||||||| | | | || |||||||| ||||||| |||||||||||||| |||||||||    
T  15420568 gttaaatatgtttttggtccctataaaattgggaccttctaagtttaatccttacctaattttaatagttcttttagtcc 15420489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 43597894 - 43597815
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||  |||||| ||||||| ||| ||| |||| ||||||||||||||||||||| ||| |||||||||    
T  43597894 gttaaatatgtttttgatccctaaaaaatcggggcctttcaagtctagtccttacttaattttaatggttcttttagtcc 43597815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 37107568 - 37107642
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | | | ||||||||||||||||||||||||| |||||||  |||||||||    
T  37107568 atatgtttttggtccctataaaattgggaccttttaagtttagtccttacttaattataatagtgtttttagtcc 37107642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 38595400 - 38595326
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | |   |||||||||||||||||||||||||||||||||  |||||||||    
T  38595400 atatgtttttggtccctataaaattgggaatttttaagtttagtccttacttaattttaatagtgcttttagtcc 38595326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 40304597 - 40304523
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||||| | |   |||||||||||||||||||||||||||||||||  |||||||||    
T  40304597 atatgtttttggtccctataaaattgggatcttttaagtttagtccttacttaattttaatagtgtttttagtcc 40304523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 4900275 - 4900195
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| | |||||||||| |||||| ||| | ||||||||||| ||| |||||||||||||||| | |||||||||    
T  4900275 agttaaatatatatttagtccctgtaaaattgagaccttttaagtttaatccatacttaattttaataggtcttttagtcc 4900195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 6589367 - 6589287
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||| ||||||||| |||| |||||||| |||   || ||||||||||||||||||||||||||||| | ||||||||||    
T  6589367 gttaattatgtttttggtccatataaaattgagaacttctaagtttagtccttacttaattttaataggttttttagtcct 6589287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 10620397 - 10620485
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||| ||||| ||||||||||||| ||    || ||||||||||||||||||||||||||||| | |||||||||  |||||||    
T  10620397 gttaaatatctttttggtccctataaaattgaaaacttctaagtttagtccttacttaattttaataggttttttagtccgtacaaaaa 10620485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 42974689 - 42974617
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||  |||||||||||| | | | |||||||||||||||||||||||||||||||||  |||||||    
T  42974689 atatgttttttatccctataaaattgggaccttttaagtttagtccttacttaattttaatagtgtttttagt 42974617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 47791735 - 47791799
Alignment:
Q  144 gtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||| | | | ||||||||| |||||||||||||||||||||||| ||||||||||    
T  47791735 gtccctataaaattgggaccttttaagttcagtccttacttaattttaatagtttttttagtcct 47791799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 4884025 - 4883946
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||  | |||||||||| | | | ||| |||||||||||||||||||||||||| ||| |||||||||    
T  4884025 gttaaatatgtttttgattcctataaaatagggacctttcaagtttagtccttacttaattttaatggttcttttagtcc 4883946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 18798829 - 18798892
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagt 196  Q
    |||||||||| ||||||||||||| ||| | || |||||||| |||||||||||||||||||||    
T  18798829 atatgtttttggtccctataaaattgagaccttataagtttaatccttacttaattttaatagt 18798892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 35482467 - 35482392
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    ||||||||||||||| |||||||||||||   |  ||||||| ||||||| ||||||||||||||||||| |||||    
T  35482467 gttaaatatgtttttggtccctataaaattaggatattttaaatttagtcattacttaattttaatagttctttta 35482392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 12621979 - 12621905
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||||||||||| | | | | ||||||||||||||||||||||||| |||||||  |||||||||    
T  12621979 atatgtttttggtccctataaatttgggaccttttaagtttagtccttacttaattataatagtatttttagtcc 12621905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 28924382 - 28924455
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    |||||||||||||||| |||||||||| | ||| | |||||| ||||||| ||||||||||||||||||| ||||    
T  28924382 gttaaatatgtttttaatccctataaatt-gagactttttaaatttagtcattacttaattttaatagttttttt 28924455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 40303988 - 40304062
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| ||| | |||||||   | |||||||||||||||||||||||||||||||||||  |||||||||    
T  40303988 atatgtttttggtctcaataaaattatgacattttaagtttagtccttacttaattttaatagtgtttttagtcc 40304062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 44168135 - 44168073
Alignment:
Q  183 ttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    |||||||||||||||||||||||||| | ||||||  |||||| ||||||||||||| |||||    
T  44168135 ttaattttaatagttgttttagtccttagaaaaatgttatgcactcagtattagtctttgctc 44168073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 6330838 - 6330951
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||| |||||  ||||||||||||   ||  ||| ||||||||||||||| |||||||||| ||| ||||||| |  | ||||| | |||||| |    
T  6330838 gttaaatatatttttgatccctataaaatatcggactttcaagtttagtccttacgtaattttaatggtttttttagttcctaaaaaaaaattatgcact 6330937  T
Q  228 cagtattagtctct 241  Q
    ||||||||||||||    
T  6330938 cagtattagtctct 6330951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 11397362 - 11397293
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagtt 197  Q
    ||||||||||||||| || || ||||||| | | | |||||||||||||||||||||||||| |||||||    
T  11397362 gttaaatatgtttttggtgccaataaaattgggaccttttaagtttagtccttacttaatttaaatagtt 11397293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 15654495 - 15654422
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    |||||||||||||| |||| |||||||| | | | ||||||||||| ||| |||||||||||||||||| ||||    
T  15654495 ttaaatatgtttttggtccttataaaatagggaccttttaagtttattccatacttaattttaatagttctttt 15654422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 27727102 - 27727190
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | |   || |||||||| |||||||||||||||||||| | ||| |||||  |||||||    
T  27727102 gttaaatatgtttttggtccctataaaattgggaacttctaagtttactccttacttaattttaataggtttttaagtccctacaaaaa 27727190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 38599388 - 38599300
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||  | ||||||||||   | | || ||||||||||||||||||||||||||||| | ||||| ||| ||||||||    
T  38599388 gttaaatatgtttttgattcctataaaattacgaccttctaagtttagtccttacttaattttaatagcttttttaatccccacaaaaa 38599300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 8081698 - 8081761
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagt 196  Q
    |||||||||| || |||||||||| | |   |||||||||||||||||||||||||||||||||    
T  8081698 atatgtttttggtacctataaaattgggatcttttaagtttagtccttacttaattttaatagt 8081761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 10620919 - 10620840
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| |||| |||||||| | |  |||| ||||||| |||||| ||||||||||||||| || ||||||    
T  10620919 gttaaatatgtttttggtccttataaaattgtgatatttgaagtttaatccttatttaattttaatagtttttgtagtcc 10620840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 38593164 - 38593226
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagt 196  Q
    |||||||||| ||||||||||||| | ||   ||||||||||||||||||||||||||||||||    
T  38593164 atatgtttttggtccctataaaattg-ggacctttaagtttagtccttacttaattttaatagt 38593226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 43597361 - 43597440
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||  |||||||||||| | | | ||| ||||||| || ||||||||||||||||| | |||||||||    
T  43597361 gttaaatatgtttttgatccctataaaatagggacctttcaagtttaatctttacttaattttaatagattttttagtcc 43597440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 1065580 - 1065654
Alignment:
Q  133 atatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||| || |||||||||| | | |||||||||||||||||||| |||||| |||| ||  |||||||||    
T  1065580 atatgtttttggttcctataaaattgggacattttaagtttagtccttaattaattataattgtgtttttagtcc 1065654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 38159370 - 38159304
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaata 194  Q
    ||||||||||||||| ||||||||||||| | |   ||| ||||||| |||||||||||||||||||    
T  38159370 gttaaatatgtttttggtccctataaaatagggatttttcaagtttaatccttacttaattttaata 38159304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 1544847 - 1544806
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  1544847 taagtttagtccttacgtaattttaatagttcttttagtcct 1544806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 22378375 - 22378423
Alignment:
Q  168 aagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||| |||||||||||||||||||| | |||||||||| |||||||    
T  22378375 aagtttaatccttacttaattttaatagattttttagtccttacaaaaa 22378423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 28924911 - 28924823
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||| |||||  |||||||||||| | |   || |||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  28924911 gttaaatatatttttgatccctataaaattgggaacttctaagtttaatccttacttaattttaatagcttttttagtccctacaaaaa 28924823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 37540204 - 37540136
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagt 196  Q
    ||||||||| ||||| |||| |||||||| ||    || ||||||||||||||||||||||||||||||    
T  37540204 gttaaatatatttttggtccatataaaattgaaaacttataagtttagtccttacttaattttaatagt 37540136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 197
Target Start/End: Original strand, 1544392 - 1544422
Alignment:
Q  167 taagtttagtccttacttaattttaatagtt 197  Q
    |||||||||||||||||||||||||||||||    
T  1544392 taagtttagtccttacttaattttaatagtt 1544422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 14990426 - 14990492
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||||||  ||| |||||||| ||    |||||||||||||||||| |||||||||||||    
T  14990426 ttaaatatgtttttgatccttataaaattgataatttttaagtttagtccttatttaattttaatag 14990492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 15420037 - 15420103
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||||||||  ||| |||||||| ||    |||||||||||||||||| |||||||||||||    
T  15420037 ttaaatatgtttttgatccttataaaattgataatttttaagtttagtccttatttaattttaatag 15420103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 15652713 - 15652755
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||    
T  15652713 ttttaagtttagtcctaacttaatttgaatagtttttttagtc 15652755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 43574620 - 43574590
Alignment:
Q  164 ttttaagtttagtccttacttaattttaata 194  Q
    |||||||||||||||||||||||||||||||    
T  43574620 ttttaagtttagtccttacttaattttaata 43574590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 1961817 - 1961850
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagtt 197  Q
    ||||||||||| ||||||||||||||||||||||    
T  1961817 ttttaagtttaatccttacttaattttaatagtt 1961850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 15492939 - 15492886
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtcctta 181  Q
    |||||||||||||||  |||||||||||| | | | ||||||||||||||||||    
T  15492939 gttaaatatgtttttgatccctataaaattgggaccttttaagtttagtcctta 15492886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 38598890 - 38598939
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | ||||| |||| |||||||    
T  38598890 taagtttagtccttatttaattttaatagcttttttaatccttacaaaaa 38598939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 10463212 - 10463240
Alignment:
Q  167 taagtttagtccttacttaattttaatag 195  Q
    |||||||||||||||||||||||||||||    
T  10463212 taagtttagtccttacttaattttaatag 10463240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 15434758 - 15434710
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtc 177  Q
    |||||||||| ||| ||||||||||||| ||  ||||||||||||||||    
T  15434758 ttaaatatgtatttggtccctataaaattgaaacattttaagtttagtc 15434710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 127; Significance: 1e-65; HSPs: 4)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 23373 - 23163
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnng-ttcagttaaat 134  Q
    ||||||||||||||| ||| || |||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||          ||  |||||||    
T  23373 ccgttagcaaaatagatcctcgctgttaattgttgttgattgagcaaacggtgaagcacacgtggacgccacatctgactttttttttattgggttaaat 23274  T
Q  135 atgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatt 234  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  23273 atgtttttagtccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactcagtatt 23174  T
Q  235 agtctctgctc 245  Q
    |||||||||||    
T  23173 agtctctgctc 23163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 227
Target Start/End: Complemental strand, 25546 - 25357
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||||||||||||||  | ||||||||||||||||| |||||||  |  ||||||||||||||||||||||||||        |||  ||||||||    
T  25546 ccgttagcaaaataggtccttgctgttaattgttgctgattgagcaaacag--aagcacacgtggatgccacatctgacttttttttgttgggttaaata 25449  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcatt 227  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25448 tgtttttagcccctataaaattgaggcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatactatgcatt 25357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 59 - 241
Target Start/End: Original strand, 23603 - 23784
Alignment:
Q  59 tgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcg 158  Q
    |||||||||||| | || || |||||| ||||||||||||||||||||||||||||        ||| ||||||||||||||||||||||| |||||| |    
T  23603 tgttaattgttgttaattgaacaaatgatgaagcacacgtggatgccacatctgacttttttt-gttgagttaaatatgtttttagtccctttaaaattg 23701  T
Q  159 aggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtctct 241  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| | | |||||||||||||    
T  23702 aggcattttaagtttaatccttacttaattttaatagttgttttagtccttacaaaaatactatgaacttagtattagtctct 23784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 24887 - 24682
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||   ||||| ||||| |||||| ||||||||||         ||  ||||||||    
T  24887 ccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaccagtgaatcacacatggatgtcacatctgactattttt--tttggttaaata 24790  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||  || |||||||||    
T  24789 tgtttttagtccctgtaaaattgaagcattttaagtttagtccttatttaattttaatagttgttttagtccttac--aaatactagtcactcagtatta 24692  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  24691 gtctctgctc 24682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 36 - 242
Target Start/End: Complemental strand, 7365 - 7160
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||| ||||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||        |||  ||||||||    
T  7365 ccgttagtaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtggatgccacatctaacttttttttgttgggttaaata 7266  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||    
T  7265 tgtttttagtcc-tataaaattgaggcattttaagtttagtccttacttaattttaataattgttttagtccttacaaaaataccatgcactcagtatta 7167  T
Q  236 gtctctg 242  Q
    |||||||    
T  7166 gtctctg 7160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 5578 - 5820
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||||| ||||       || |||||||||||||||  || |||||||||||| |||| |||||||    ||||||||| ||    
T  5578 aaattttattaaatttttggtccccaacgtttttttccattagcaaaataggtcatcgctgttaattgttgttgattgagcaaacaacgaagcacacatg 5677  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  5678 gatgccacatctgactttttt--gttg-gttaaatatgtttttagtccctaaaaaattgaggcattttaagtttagtccttacttaattctaatcgttgt 5774  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||| ||||| |||||||||||||||| | |||||||||| ||||||    
T  5775 ttttgtccttacaaaaatactatgcacttagtattagtccctgctc 5820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 49293 - 49052
Alignment:
Q  1 aaattttattaaatttttggtc-ccaacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||||||||||||||| || |||       |||||||||||||| |||| || ||||||||||||||||| ||||||| ||  |||||||||||    
T  49293 aaattttattaaatttttggtctccgacgtttttttccgttagcaaaataagtcctcgctgttaattgttgctgattgagcaaacgg--aagcacacgtg 49196  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||||||||||||||        |||  |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  49195 gatgccacatctgacttttttttgttgggttaaatatgtttt-agtccctataaaattgacgcattttaagtttagtccttacttaattttaatagttgt 49097  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||    
T  49096 tttagtccttacaaaaatactatgcattcaat-ttagtctctgctc 49052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 118; Significance: 3e-60; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 240536 - 240293
Alignment:
Q  1 aaattttattaaatttttggtccca-acgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    ||||||||||||||||||||||||  |||       ||||||||||||||||||  || ||||||||||||||||| |||||||  |  |||||||||||    
T  240536 aaattttattaaatttttggtccccgacgtttttttccgttagcaaaataggtcatcgctgttaattgttgctgattgagcaaacag--aagcacacgtg 240439  T
Q  100 gatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgt 199  Q
    |||| ||||||||||        |||   |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  240438 gatgtcacatctgacttttttttgttgcattaaatatgtttttagtccctataaaattgaggcattttaagtttagttcttacttaattttaatagttgt 240339  T
Q  200 tttagtcctcacaaaaatactatgcattcagtattagtctctgctc 245  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||    
T  240338 tttagtccttacaaaaatactatgcattcaatattagtctttgctc 240293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 239409 - 239486
Alignment:
Q  161 gcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  239409 gcattttaagtttagtccttacttaattttaatagttgttttagtccttacaaaaatattatgcactcagtattagtc 239486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 239265 - 239379
Alignment:
Q  1 aaattttattaaatttttggtccc-aacgnnnnnnnccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtg 99  Q
    |||||||||| ||||||||||||| ||||       ||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||    
T  239265 aaattttattcaatttttggtccccaacgtttttttccgttagcaaaataggtcctcgctgttaattgttgctgattgagcaaacggtgaagcacacgtg 239364  T
Q  100 gatgccacatctgac 114  Q
    |||||||| ||||||    
T  239365 gatgccacgtctgac 239379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 120634 - 120708
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttt 202  Q
    ||||||||||||||| |||  |||||||| |||   ||| |||||||||||||| ||||||||||||||| ||||    
T  120634 gttaaatatgttttttgtctgtataaaattgagatctttcaagtttagtccttaattaattttaatagttatttt 120708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 10451 - 10244
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    ||||||||||||||||||     ||||||||||||||||| ||||||| ||  ||||||| ||||||||||||||||||        |||  ||||||||    
T  10451 ccgttagcaaaataggtcattcctgttaattgttgctgattgagcaaacgg--aagcacatgtggatgccacatctgacttttttttgttgggttaaata 10354  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||    
T  10353 tgtttttagtccctataaaattgagtcattttaagtttagttcttacttaattttaatagttgttttagtccttacaaaaacactatgcattcaatatta 10254  T
Q  236 gtctctgctc 245  Q
    ||||||||||    
T  10253 gtctctgctc 10244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 56 - 238
Target Start/End: Original strand, 9240 - 9418
Alignment:
Q  56 cgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaatatgtttttagtccctataaaa 155  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||        |||  ||||||||||||||||||||||||||||    
T  9240 cgttgttaattgttgttgattgagcaaatggtgaagcacacgtggatgtcacatctgacttttttt-gttgggttaaatatgtttttagtccctataaaa 9338  T
Q  156 tcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    | |||| |||||||||||| |||||||||||||   ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9339 ttgaggtattttaagtttaatccttacttaatt---atagttgttttagtccttacaaaaatactatgcactcagtattagtc 9418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 36 - 238
Target Start/End: Complemental strand, 224 - 25
Alignment:
Q  36 ccgttagcaaaataggtccgcgttgttaattgttgctgatagagcaaatggtgaagcacacgtggatgccacatctgacnnnnnnnngttcagttaaata 135  Q
    |||||||| |||||||||  || |||||||||||  | || ||||||| ||||||||||||||||||| ||||||| ||        | |  ||||||||    
T  224 ccgttagcgaaataggtcatcgctgttaattgttatt-attgagcaaacggtgaagcacacgtggatgtcacatct-actttttttgg-tgggttaaata 128  T
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtatta 235  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||    
T  127 tgtttttagtccctataaaattgaggtattttaagttttgtccttacttaattttaatagttgttttagtccttacaaaaatactatgcactaagtatta 28  T

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Target: scaffold0514 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 6586 - 6509
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  6586 gttaaatatgtttttggtccctataaaattgagacattttaagtttagtccttacttaattttaatagttcttttagt 6509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 6059 - 6145
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaa 215  Q
    |||||||| || || ||||||||||||| | |   || ||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  6059 ttaaatatattctttgtccctataaaattgggaacttctaagtttagtccttacttaattttaataggttttttagtccttacaaaa 6145  T

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Target: scaffold0125 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 21957 - 21882
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||| |||||    
T  21957 gttaaatatgtttttagtccctataaaattgagatcttttaagtttagtccttacttaattttaatagttctttta 21882  T

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Target: scaffold1190 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 602 - 525
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    ||||||||||||||| |||||||||||||  || ||||||||||||||| |||||||||||||||||||| |||||||    
T  602 gttaaatatgtttttggtccctataaaatttagacattttaagtttagttcttacttaattttaatagttcttttagt 525  T

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Target: scaffold1190; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 80 - 166
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaa 215  Q
    |||||||| ||||| ||| ||||||||| | |   || ||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  80 ttaaatatattttttgtcactataaaattgggaacttctaagtttagtccttacttaattttaataggttttttagtccttacaaaa 166  T

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Target: scaffold0036 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 244
Target Start/End: Complemental strand, 17788 - 17671
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaata-ctatgcat 226  Q
    |||||||||||||||||||| |||||||| |||   |||||||||||||| ||||||||||||||||||| ||||| |||  ||||||| |  ||||||     
T  17788 gttaaatatgtttttagtccttataaaattgagagcttttaagtttagtctttacttaattttaatagttcttttaatccctacaaaaaaagttatgcac 17689  T
Q  227 tcagtattagtctctgct 244  Q
    |||||||||||| |||||    
T  17688 tcagtattagtccctgct 17671  T

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Target: scaffold0036; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 17255 - 17344
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaata 218  Q
    |||||||||||||| ||||||||||||| |||   || |||||||| |||||||||||||||||||||| |||||||||  |||||||||    
T  17255 ttaaatatgtttttggtccctataaaattgagaatttctaagtttaatccttacttaattttaatagtttttttagtccctacaaaaata 17344  T

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Target: scaffold0627 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 6817 - 6897
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||| ||||||||||||||||||| | | | |||||||||||||||||||||||||| |||| || ||||||||||    
T  6817 gttaaatatatttttagtccctataaaattgggaccttttaagtttagtccttacttaatttaaataattcttttagtcct 6897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 3741 - 3829
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | | | ||||||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  3741 gttaaatatgtttttggtccctataaaatagggaccttttaagtttaatccttacttaattttaataggttttttagtccctacaaaaa 3829  T

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Target: scaffold0562; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 4401 - 4323
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| |||||||||||||   | | |||||||||||||  |||||||||||| |||||| |||||||||    
T  4401 gttaaatatgtttttggtccctataaaatatggaccttttaagtttagtttttacttaatttt-atagttcttttagtcc 4323  T

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Target: scaffold0707 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 7313 - 7193
Alignment:
Q  127 agttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttag-tcctcacaaaaatactatgca 225  Q
    |||||||||||||||||||| ||||||||| | |   |||||||||||||| ||||||||||||||||||| | |||| |||| | ||||| | ||||||    
T  7313 agttaaatatgtttttagtctctataaaattgggatcttttaagtttagtcattacttaattttaatagttatgttagttcctaaaaaaaaaattatgca 7214  T
Q  226 ttcagtattagtctctgctcc 246  Q
      | |||||||||||| ||||    
T  7213 cccggtattagtctctcctcc 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 6824 - 6876
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||| |||||||||||||| |||||||||| | || ||||||| |||||||    
T  6824 ttttaaatttagtccttacttgattttaataggttttatagtccttacaaaaa 6876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 3768 - 3856
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||| ||||||| | | | || ||||||||||||||||||||||||||||||| ||||| |||  |||||||    
T  3768 gttaaatatgtttttggtcccaataaaattgcgaccttctaagtttagtccttacttaattttaatagtttttttaatccctacaaaaa 3856  T

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Target: scaffold0445 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 5794 - 5882
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||||||||||||| ||||||||||||| | | | ||| ||||||| |||||||||||||||||||| | |||||||||  |||||||    
T  5794 gttaaatatgtttttggtccctataaaatagggacctttcaagtttaatccttacttaattttaatagattttttagtccctacaaaaa 5882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 6329 - 6251
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| | ||||| ||||| | ||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  6329 gttaaatatgtttttgg-ccctacaaaataggggccttttaagtttagtccttacttaattttaatggttcttttagtcc 6251  T

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Target: scaffold0571 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 8868 - 8782
Alignment:
Q  129 ttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||| ||||||||||||| ||    ||||||||||| |||||||||||||||||||||| |||||||||  |||||||    
T  8868 ttaaatatgtttttggtccctataaaattgaaaacttttaagtttaatccttacttaattttaatagtt-ttttagtccctacaaaaa 8782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 6088 - 6167
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||| ||||||| ||||| | | | | |||||||||||||||||||||||||||||||| ||| |||||    
T  6088 gttaaatatgtttttggtccctaaaaaattgggacctcttaagtttagtccttacttaattttaatagttctttgagtcc 6167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 123550 - 123471
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    ||||||||||||||| ||||||||||||| |   | ||||||||||||||||||||| |||||||||| | ||||||||||    
T  123550 gttaaatatgtttttggtccctataaaattggaaccttttaagtttagtccttactt-attttaataggttttttagtcct 123471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 1049 - 998
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  1049 ttttaagtttagtccttacttaattttaatagtt-ttttagtccctacaaaaa 998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 553 - 633
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||  ||  |||||||| |||   ||| || ||||| ||||||||||||||||||||| ||||||||||    
T  553 gttaaatatgtttttgatctatataaaattgagatctttaaaatttagaccttacttaattttaatagttcttttagtcct 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 238235 - 238315
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcct 208  Q
    |||||||||||||||  || ||||||||| | |   || ||||||||||||||||||||||||||||| | ||||||||||    
T  238235 gttaaatatgtttttgatctctataaaattgggtacttctaagtttagtccttacttaattttaatagcttttttagtcct 238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 282852 - 282927
Alignment:
Q  163 attttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaatactatgcattcagtattagtc 238  Q
    |||||||||||||||||||||||||| |||||||  |||||||||  | ||||| | |||||| ||||| ||||||    
T  282852 attttaagtttagtccttacttaattataatagtgtttttagtccatataaaaaaattatgcactcagttttagtc 282927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 283640 - 283569
Alignment:
Q  136 tgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||| ||||||||||||| ||| | || |||||| | ||||||||||||| |||||||  |||||||||    
T  283640 tgtttttggtccctataaaattgagactttgtaagttaaatccttacttaattataatagtgtttttagtcc 283569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 157906 - 157993
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    |||||||||||||||| ||| |||||||| |||   || ||||||||||||| ||||||||||||||| | |||||||||  |||||||    
T  157906 gttaaatatgtttttaatcc-tataaaattgagaacttctaagtttagtcctcacttaattttaataggtcttttagtccatacaaaaa 157993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 2728 - 2795
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatag 195  Q
    ||||||||| ||||| ||||||||||||| |   | || |||||||||||||||||||||||||||||    
T  2728 gttaaatatatttttggtccctataaaattgcaaccttctaagtttagtccttacttaattttaatag 2795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 3559 - 3471
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcctcacaaaaa 216  Q
    ||||| ||||||||  ||||||| ||||| | | | || ||||||||||||||| ||||||||||||| | ||||| |||| |||||||    
T  3559 gttaattatgttttcggtccctacaaaattgtgaccttataagtttagtccttatttaattttaatagcttttttaatccttacaaaaa 3471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 27064 - 27139
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgtttta 203  Q
    ||||| ||||||||||||| |||||||||   | | ||||||||||||| |||| ||||||||||||||| |||||    
T  27064 gttaattatgtttttagtctctataaaattcggaccttttaagtttagtacttatttaattttaatagttttttta 27139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 47767 - 47807
Alignment:
Q  167 taagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  47767 taagtttagtccttacttaattttaatagcttttttagtcc 47807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 6002 - 5923
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtcc 207  Q
    |||||||||||||||  |||||||||||| |||   || |||||||||| |||| ||||||||||| ||| ||| |||||    
T  6002 gttaaatatgtttttgatccctataaaattgagaacttgtaagtttagttcttaattaattttaatggttttttaagtcc 5923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 1605 - 1528
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatcgaggcattttaagtttagtccttacttaattttaatagttgttttagtc 206  Q
    ||||||||| ||||| ||||||||||||| | |   || ||| |||||| |||||||||||||||||||| ||||||||    
T  1605 gttaaatatatttttggtccctataaaattgggaacttctaaatttagttcttacttaattttaatagtt-ttttagtc 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 1077 - 1118
Alignment:
Q  164 ttttaagtttagtccttacttaattttaatagttgttttagt 205  Q
    |||||| ||||||| ||||||||||||||||||| |||||||    
T  1077 ttttaaatttagtctttacttaattttaatagttcttttagt 1118  T

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Target: scaffold0233 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 157
Target Start/End: Complemental strand, 17094 - 17065
Alignment:
Q  128 gttaaatatgtttttagtccctataaaatc 157  Q
    ||||||||||||||||||||||||||||||    
T  17094 gttaaatatgtttttagtccctataaaatc 17065  T

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Target: scaffold0233; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 16834 - 16862
Alignment:
Q  128 gttaaatatgtttttagtccctataaaat 156  Q
    |||||||||||||||||||||||||||||    
T  16834 gttaaatatgtttttagtccctataaaat 16862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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