View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10881_high_1 (Length: 435)

Name: NF10881_high_1
Description: NF10881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10881_high_1
NF10881_high_1
[»] chr3 (75 HSPs)
chr3 (21-427)||(45093853-45094261)
chr3 (328-427)||(36665150-36665251)
chr3 (315-427)||(35717870-35717984)
chr3 (328-427)||(7671341-7671442)
chr3 (345-428)||(51062521-51062606)
chr3 (331-421)||(32285207-32285299)
chr3 (299-419)||(32951136-32951257)
chr3 (345-427)||(37833032-37833116)
chr3 (299-428)||(53066505-53066631)
chr3 (345-422)||(49057993-49058072)
chr3 (331-427)||(10571175-10571273)
chr3 (331-419)||(17053004-17053094)
chr3 (331-427)||(21907128-21907226)
chr3 (331-427)||(38492183-38492281)
chr3 (331-427)||(38833795-38833893)
chr3 (345-427)||(7459865-7459949)
chr3 (345-427)||(43137983-43138067)
chr3 (345-427)||(54673910-54673994)
chr3 (322-427)||(29728120-29728227)
chr3 (347-427)||(25097234-25097316)
chr3 (331-427)||(54840159-54840257)
chr3 (313-427)||(3547433-3547550)
chr3 (345-428)||(52668531-52668616)
chr3 (345-427)||(1327444-1327528)
chr3 (299-400)||(4238494-4238594)
chr3 (345-427)||(8559050-8559134)
chr3 (345-427)||(18659184-18659268)
chr3 (314-427)||(15503155-15503270)
chr3 (345-410)||(48706891-48706958)
chr3 (331-427)||(45167431-45167529)
chr3 (331-400)||(47638216-47638285)
chr3 (328-422)||(48143900-48143996)
chr3 (342-400)||(901047-901105)
chr3 (342-400)||(34669650-34669708)
chr3 (342-400)||(36179095-36179153)
chr3 (321-427)||(46483682-46483788)
chr3 (342-400)||(50673719-50673777)
chr3 (342-424)||(53274928-53275012)
chr3 (357-422)||(3086278-3086345)
chr3 (362-419)||(10435274-10435333)
chr3 (345-427)||(5030034-5030119)
chr3 (368-410)||(9145648-9145690)
chr3 (342-400)||(9484638-9484696)
chr3 (342-400)||(12948082-12948140)
chr3 (358-400)||(18013429-18013471)
chr3 (342-400)||(29455667-29455725)
chr3 (342-400)||(29793337-29793395)
chr3 (342-400)||(34263663-34263721)
chr3 (342-400)||(42098586-42098644)
chr3 (342-400)||(49076385-49076443)
chr3 (347-400)||(34555198-34555251)
chr3 (347-400)||(38833924-38833977)
chr3 (355-400)||(44057542-44057587)
chr3 (345-427)||(48690185-48690269)
chr3 (342-427)||(1778403-1778490)
chr3 (342-427)||(4945781-4945868)
chr3 (362-427)||(27849083-27849150)
chr3 (353-400)||(23631551-23631598)
chr3 (347-427)||(26759526-26759608)
chr3 (367-422)||(28690653-28690707)
chr3 (353-400)||(48927761-48927808)
chr3 (358-400)||(4464939-4464981)
chr3 (353-383)||(30080715-30080745)
chr3 (342-400)||(32961288-32961346)
chr3 (346-400)||(35135764-35135818)
chr3 (342-400)||(43370333-43370391)
chr3 (358-400)||(47340043-47340085)
chr3 (358-427)||(3648234-3648302)
chr3 (345-398)||(21271897-21271950)
chr3 (343-392)||(39557546-39557595)
chr3 (345-397)||(1778216-1778268)
chr3 (342-427)||(29720437-29720524)
chr3 (353-397)||(30681939-30681983)
chr3 (358-427)||(34680239-34680310)
chr3 (348-400)||(54684627-54684679)
[»] chr2 (69 HSPs)
chr2 (299-422)||(43925074-43925198)
chr2 (321-422)||(7106415-7106518)
chr2 (321-427)||(4083339-4083447)
chr2 (299-427)||(39418020-39418149)
chr2 (339-422)||(1110429-1110514)
chr2 (345-427)||(38963651-38963735)
chr2 (348-421)||(38137579-38137654)
chr2 (299-427)||(20517550-20517679)
chr2 (328-410)||(332423-332507)
chr2 (313-427)||(13399118-13399234)
chr2 (345-427)||(18718371-18718455)
chr2 (322-427)||(42038655-42038762)
chr2 (331-427)||(9877114-9877212)
chr2 (357-427)||(3987289-3987361)
chr2 (345-427)||(44283324-44283408)
chr2 (322-427)||(7442913-7443020)
chr2 (299-427)||(42020203-42020333)
chr2 (331-427)||(30708860-30708958)
chr2 (345-427)||(14372209-14372293)
chr2 (345-427)||(16941856-16941940)
chr2 (345-427)||(17012521-17012605)
chr2 (345-427)||(34827044-34827128)
chr2 (345-427)||(41172802-41172886)
chr2 (313-422)||(24282973-24283084)
chr2 (322-427)||(41463539-41463646)
chr2 (347-427)||(27559707-27559789)
chr2 (331-419)||(40598269-40598359)
chr2 (331-427)||(44330516-44330614)
chr2 (345-427)||(14707580-14707663)
chr2 (357-427)||(23671508-23671580)
chr2 (331-400)||(32775934-32776003)
chr2 (357-427)||(36199008-36199080)
chr2 (357-427)||(40425306-40425378)
chr2 (329-427)||(4045262-4045362)
chr2 (342-427)||(12209031-12209118)
chr2 (343-427)||(18733968-18734054)
chr2 (355-427)||(4045982-4046055)
chr2 (342-400)||(7724574-7724632)
chr2 (342-400)||(8373476-8373534)
chr2 (342-400)||(8896313-8896371)
chr2 (345-427)||(30776245-30776322)
chr2 (342-400)||(38963837-38963895)
chr2 (342-400)||(40471778-40471836)
chr2 (347-400)||(16127743-16127796)
chr2 (347-400)||(41436879-41436932)
chr2 (357-427)||(43409417-43409489)
chr2 (345-400)||(3037874-3037929)
chr2 (361-400)||(4137470-4137509)
chr2 (341-400)||(5096289-5096348)
chr2 (347-427)||(27668005-27668087)
chr2 (345-400)||(42951545-42951599)
chr2 (353-400)||(43328764-43328811)
chr2 (347-410)||(2831754-2831819)
chr2 (342-400)||(6075167-6075225)
chr2 (342-400)||(16126045-16126103)
chr2 (358-400)||(37987899-37987941)
chr2 (355-400)||(5030339-5030384)
chr2 (347-400)||(10333541-10333594)
chr2 (342-383)||(11277593-11277634)
chr2 (347-400)||(32776168-32776221)
chr2 (343-400)||(33046199-33046256)
chr2 (367-421)||(37806849-37806905)
chr2 (361-427)||(42951472-42951539)
chr2 (347-400)||(45036410-45036463)
chr2 (362-427)||(6730037-6730104)
chr2 (361-410)||(11383996-11384047)
chr2 (352-400)||(15177421-15177469)
chr2 (342-427)||(31603350-31603437)
chr2 (353-397)||(41491995-41492039)
[»] chr8 (59 HSPs)
chr8 (313-427)||(20167590-20167706)
chr8 (345-422)||(25256470-25256549)
chr8 (328-427)||(886097-886198)
chr8 (315-422)||(10658114-10658223)
chr8 (345-419)||(31127850-31127926)
chr8 (331-427)||(6470977-6471075)
chr8 (331-427)||(30380662-30380760)
chr8 (345-427)||(13138177-13138261)
chr8 (331-427)||(3293132-3293230)
chr8 (331-419)||(18809416-18809506)
chr8 (315-410)||(44123819-44123916)
chr8 (345-427)||(23248984-23249068)
chr8 (345-427)||(29791074-29791158)
chr8 (345-427)||(30290056-30290140)
chr8 (345-427)||(43066258-43066342)
chr8 (345-422)||(14847346-14847425)
chr8 (331-427)||(8350911-8351009)
chr8 (347-427)||(38845739-38845821)
chr8 (314-410)||(45253895-45253993)
chr8 (331-422)||(37710036-37710129)
chr8 (345-427)||(1580810-1580894)
chr8 (346-427)||(2805522-2805605)
chr8 (322-427)||(2986457-2986564)
chr8 (321-422)||(3383546-3383648)
chr8 (328-410)||(12893677-12893761)
chr8 (345-427)||(38739789-38739873)
chr8 (357-427)||(39361257-39361329)
chr8 (357-427)||(45081944-45082016)
chr8 (331-427)||(40013783-40013881)
chr8 (331-422)||(14522517-14522609)
chr8 (345-428)||(35584105-35584190)
chr8 (342-400)||(40645651-40645709)
chr8 (350-428)||(11854656-11854736)
chr8 (347-421)||(20671303-20671379)
chr8 (361-427)||(23764510-23764578)
chr8 (347-400)||(38842210-38842263)
chr8 (353-400)||(4327080-4327127)
chr8 (331-427)||(6470645-6470743)
chr8 (345-400)||(13888591-13888646)
chr8 (342-400)||(21132889-21132947)
chr8 (342-400)||(25691558-25691616)
chr8 (342-400)||(30464474-30464532)
chr8 (353-427)||(17523858-17523934)
chr8 (347-421)||(29917866-29917942)
chr8 (342-427)||(8496818-8496905)
chr8 (347-422)||(9302399-9302477)
chr8 (353-400)||(23547121-23547168)
chr8 (353-400)||(29616287-29616334)
chr8 (353-400)||(30653413-30653460)
chr8 (347-427)||(42786030-42786112)
chr8 (361-400)||(44039886-44039925)
chr8 (342-400)||(3466325-3466383)
chr8 (358-400)||(15870233-15870275)
chr8 (358-400)||(25009202-25009244)
chr8 (353-427)||(7431251-7431327)
chr8 (347-400)||(43184740-43184793)
chr8 (353-397)||(11335390-11335434)
chr8 (360-400)||(23437774-23437814)
chr8 (368-421)||(26627970-26628025)
[»] chr7 (52 HSPs)
chr7 (313-427)||(44389299-44389415)
chr7 (314-427)||(18795154-18795269)
chr7 (331-427)||(47713533-47713631)
chr7 (331-427)||(48531454-48531552)
chr7 (331-419)||(37231594-37231684)
chr7 (331-427)||(44479752-44479850)
chr7 (323-427)||(46657765-46657871)
chr7 (345-427)||(32618987-32619071)
chr7 (345-427)||(36819828-36819912)
chr7 (331-427)||(10464146-10464244)
chr7 (331-427)||(21392150-21392248)
chr7 (331-427)||(31466389-31466487)
chr7 (313-421)||(31497722-31497827)
chr7 (345-427)||(2400417-2400501)
chr7 (331-400)||(34478039-34478108)
chr7 (357-427)||(36859265-36859337)
chr7 (331-427)||(4612118-4612216)
chr7 (331-419)||(35500778-35500868)
chr7 (331-427)||(47538055-47538153)
chr7 (331-422)||(23474000-23474093)
chr7 (345-427)||(37950990-37951074)
chr7 (345-427)||(42086683-42086767)
chr7 (357-427)||(42834349-42834421)
chr7 (345-427)||(47081112-47081196)
chr7 (346-427)||(36905658-36905741)
chr7 (331-427)||(19072901-19072999)
chr7 (331-419)||(36643302-36643392)
chr7 (345-410)||(28185456-28185523)
chr7 (345-400)||(7314309-7314364)
chr7 (343-427)||(27248780-27248866)
chr7 (346-422)||(31110762-31110840)
chr7 (322-410)||(33613362-33613451)
chr7 (372-427)||(29770546-29770603)
chr7 (346-400)||(42493563-42493617)
chr7 (342-422)||(23348398-23348480)
chr7 (342-400)||(16807110-16807168)
chr7 (342-400)||(30462185-30462243)
chr7 (342-400)||(38069093-38069151)
chr7 (347-400)||(9173300-9173353)
chr7 (352-427)||(2450817-2450895)
chr7 (353-400)||(28016168-28016215)
chr7 (367-427)||(38198613-38198675)
chr7 (322-380)||(22127312-22127370)
chr7 (321-427)||(23734190-23734299)
chr7 (342-400)||(25273981-25274039)
chr7 (358-400)||(26651173-26651215)
chr7 (322-380)||(40535551-40535609)
chr7 (361-427)||(19327376-19327444)
chr7 (347-400)||(38850749-38850802)
chr7 (355-400)||(40348568-40348613)
chr7 (362-423)||(26190304-26190367)
chr7 (353-401)||(40818660-40818708)
[»] chr1 (55 HSPs)
chr1 (321-427)||(3529308-3529416)
chr1 (313-427)||(21034542-21034658)
chr1 (331-419)||(16265173-16265263)
chr1 (331-419)||(16266302-16266392)
chr1 (315-427)||(31971402-31971516)
chr1 (299-427)||(37281224-37281353)
chr1 (299-422)||(4605136-4605260)
chr1 (331-422)||(29161980-29162073)
chr1 (345-419)||(24982491-24982567)
chr1 (345-422)||(23569719-23569798)
chr1 (331-419)||(3898602-3898692)
chr1 (331-427)||(25531910-25532008)
chr1 (331-400)||(26441795-26441864)
chr1 (345-427)||(42708632-42708716)
chr1 (331-400)||(43680231-43680300)
chr1 (311-400)||(47222376-47222465)
chr1 (328-422)||(50481413-50481509)
chr1 (345-427)||(50876496-50876580)
chr1 (346-427)||(50539392-50539475)
chr1 (331-427)||(30529081-30529179)
chr1 (331-427)||(38458862-38458960)
chr1 (345-400)||(38737877-38737932)
chr1 (331-427)||(1849832-1849931)
chr1 (331-427)||(14075866-14075963)
chr1 (331-400)||(16751484-16751553)
chr1 (345-427)||(39354309-39354393)
chr1 (345-427)||(52379121-52379205)
chr1 (331-427)||(32988380-32988478)
chr1 (347-427)||(49805299-49805381)
chr1 (321-398)||(27581039-27581116)
chr1 (345-427)||(27990760-27990844)
chr1 (357-422)||(48264868-48264935)
chr1 (345-421)||(48219687-48219765)
chr1 (328-422)||(48376285-48376378)
chr1 (299-422)||(38737378-38737502)
chr1 (345-427)||(41501652-41501736)
chr1 (341-421)||(23330590-23330673)
chr1 (353-400)||(2138997-2139044)
chr1 (341-400)||(26543909-26543968)
chr1 (342-400)||(10100481-10100539)
chr1 (342-400)||(10124151-10124209)
chr1 (358-400)||(36035744-36035786)
chr1 (358-400)||(49903653-49903695)
chr1 (353-422)||(38786890-38786961)
chr1 (353-400)||(6017417-6017464)
chr1 (353-400)||(7075298-7075345)
chr1 (342-400)||(45299360-45299418)
chr1 (342-400)||(48312070-48312128)
chr1 (355-400)||(3555259-3555304)
chr1 (347-400)||(23337854-23337907)
chr1 (355-400)||(30005775-30005820)
chr1 (355-400)||(31698638-31698683)
chr1 (369-427)||(32565878-32565938)
chr1 (347-412)||(40883458-40883525)
chr1 (355-427)||(45234904-45234974)
[»] chr6 (40 HSPs)
chr6 (314-427)||(13206967-13207082)
chr6 (331-427)||(8796181-8796279)
chr6 (299-420)||(16696016-16696138)
chr6 (313-421)||(19068784-19068894)
chr6 (331-419)||(25163304-25163394)
chr6 (331-427)||(18992035-18992133)
chr6 (331-427)||(30237299-30237397)
chr6 (345-427)||(20662104-20662188)
chr6 (357-427)||(29986215-29986287)
chr6 (331-427)||(25435543-25435641)
chr6 (345-427)||(7097918-7098002)
chr6 (345-427)||(24150873-24150957)
chr6 (345-427)||(33121674-33121758)
chr6 (346-427)||(643477-643560)
chr6 (331-427)||(11114697-11114795)
chr6 (331-427)||(22020408-22020506)
chr6 (345-427)||(31854950-31855034)
chr6 (341-400)||(2141609-2141668)
chr6 (342-400)||(6142475-6142533)
chr6 (342-400)||(29514994-29515052)
chr6 (355-427)||(19788633-19788707)
chr6 (342-400)||(9022882-9022940)
chr6 (342-400)||(17496286-17496344)
chr6 (342-400)||(24798514-24798572)
chr6 (342-400)||(24825207-24825265)
chr6 (347-400)||(12869382-12869435)
chr6 (347-400)||(30699308-30699361)
chr6 (342-422)||(31708935-31709017)
chr6 (358-400)||(2397828-2397870)
chr6 (342-400)||(2656638-2656696)
chr6 (342-400)||(2667293-2667351)
chr6 (345-383)||(3686954-3686992)
chr6 (358-400)||(4890094-4890136)
chr6 (342-400)||(16969420-16969478)
chr6 (354-400)||(17417682-17417728)
chr6 (358-400)||(32541445-32541487)
chr6 (355-400)||(16434598-16434643)
chr6 (361-427)||(24693199-24693267)
chr6 (345-401)||(6612220-6612276)
chr6 (355-383)||(34500928-34500956)
[»] chr4 (73 HSPs)
chr4 (314-427)||(51736968-51737083)
chr4 (331-427)||(18360004-18360102)
chr4 (331-427)||(36602826-36602924)
chr4 (315-422)||(50033157-50033266)
chr4 (298-428)||(23603646-23603777)
chr4 (346-419)||(19525760-19525835)
chr4 (331-419)||(25644499-25644589)
chr4 (299-417)||(6922940-6923059)
chr4 (345-427)||(19170584-19170668)
chr4 (345-427)||(28152123-28152207)
chr4 (345-427)||(28166406-28166490)
chr4 (345-427)||(46803764-46803848)
chr4 (322-427)||(4264266-4264373)
chr4 (331-427)||(6494720-6494820)
chr4 (331-427)||(7738850-7738948)
chr4 (331-427)||(39260163-39260261)
chr4 (345-428)||(20678633-20678718)
chr4 (328-427)||(39194044-39194145)
chr4 (315-410)||(50035685-50035782)
chr4 (345-427)||(3442389-3442473)
chr4 (345-427)||(3901184-3901268)
chr4 (345-427)||(26205749-26205833)
chr4 (345-422)||(47278322-47278401)
chr4 (331-427)||(3443418-3443516)
chr4 (331-427)||(45198371-45198469)
chr4 (331-427)||(46212381-46212479)
chr4 (331-410)||(4209508-4209589)
chr4 (328-422)||(19631445-19631542)
chr4 (345-427)||(5735403-5735487)
chr4 (345-427)||(19633894-19633978)
chr4 (321-427)||(19652277-19652385)
chr4 (357-427)||(37688090-37688162)
chr4 (345-427)||(47579418-47579502)
chr4 (345-427)||(49768577-49768661)
chr4 (331-400)||(55190597-55190666)
chr4 (331-420)||(5123188-5123279)
chr4 (331-427)||(1377164-1377261)
chr4 (347-427)||(5744130-5744212)
chr4 (321-427)||(23256067-23256175)
chr4 (352-400)||(53568512-53568560)
chr4 (342-400)||(3708295-3708353)
chr4 (372-427)||(50971591-50971648)
chr4 (345-421)||(10181126-10181203)
chr4 (345-427)||(21858964-21859048)
chr4 (345-427)||(21914827-21914911)
chr4 (345-427)||(39786402-39786486)
chr4 (345-410)||(55997260-55997327)
chr4 (345-400)||(18881320-18881375)
chr4 (345-400)||(19731211-19731266)
chr4 (355-427)||(39195545-39195619)
chr4 (342-400)||(8525379-8525437)
chr4 (342-400)||(31152703-31152761)
chr4 (342-400)||(43447207-43447265)
chr4 (342-400)||(53987743-53987801)
chr4 (347-400)||(47834107-47834160)
chr4 (347-400)||(48380520-48380573)
chr4 (357-422)||(14958136-14958203)
chr4 (328-400)||(27976598-27976670)
chr4 (341-400)||(28914409-28914468)
chr4 (342-401)||(33394119-33394178)
chr4 (341-400)||(37164057-37164116)
chr4 (353-400)||(43047440-43047487)
chr4 (345-400)||(48336642-48336697)
chr4 (353-400)||(50684973-50685020)
chr4 (345-400)||(55014420-55014475)
chr4 (358-400)||(1613181-1613223)
chr4 (342-400)||(10384890-10384948)
chr4 (342-400)||(28909803-28909861)
chr4 (342-400)||(39171000-39171058)
chr4 (341-427)||(23605836-23605924)
chr4 (347-400)||(46608260-46608313)
chr4 (357-410)||(26660559-26660614)
chr4 (358-427)||(28988328-28988399)
[»] chr5 (55 HSPs)
chr5 (299-427)||(37843575-37843704)
chr5 (328-427)||(41411185-41411286)
chr5 (313-427)||(2864086-2864202)
chr5 (331-419)||(16048225-16048315)
chr5 (331-419)||(22613740-22613830)
chr5 (331-427)||(37516277-37516375)
chr5 (331-427)||(39036542-39036640)
chr5 (331-419)||(39405904-39405994)
chr5 (328-427)||(1830787-1830888)
chr5 (345-427)||(19868731-19868815)
chr5 (345-427)||(43517105-43517189)
chr5 (331-419)||(4299864-4299954)
chr5 (331-427)||(5212953-5213051)
chr5 (331-419)||(14475261-14475351)
chr5 (345-417)||(25563642-25563716)
chr5 (331-427)||(35290418-35290516)
chr5 (331-427)||(39894913-39895011)
chr5 (314-421)||(30779760-30779869)
chr5 (328-427)||(40316254-40316355)
chr5 (345-427)||(4924883-4924967)
chr5 (345-427)||(23988709-23988793)
chr5 (331-421)||(32002045-32002137)
chr5 (345-427)||(42148439-42148523)
chr5 (328-400)||(19087644-19087716)
chr5 (331-419)||(970278-970368)
chr5 (331-427)||(40512711-40512809)
chr5 (346-427)||(29627400-29627483)
chr5 (331-427)||(5364552-5364654)
chr5 (345-427)||(35448042-35448126)
chr5 (345-427)||(38698095-38698179)
chr5 (331-400)||(43067382-43067451)
chr5 (331-427)||(32334669-32334767)
chr5 (347-400)||(33402555-33402608)
chr5 (352-400)||(15268554-15268602)
chr5 (342-400)||(1098217-1098275)
chr5 (342-400)||(13548255-13548313)
chr5 (342-400)||(14057750-14057808)
chr5 (342-400)||(20022902-20022960)
chr5 (342-400)||(20040379-20040437)
chr5 (342-400)||(41263093-41263151)
chr5 (369-427)||(5985008-5985068)
chr5 (347-400)||(30788252-30788305)
chr5 (343-427)||(21961359-21961445)
chr5 (353-400)||(30211705-30211752)
chr5 (358-400)||(1781109-1781151)
chr5 (342-400)||(14633049-14633107)
chr5 (321-363)||(15268602-15268644)
chr5 (342-400)||(19344663-19344721)
chr5 (372-427)||(19889785-19889842)
chr5 (345-383)||(25773387-25773425)
chr5 (350-400)||(27477702-27477752)
chr5 (358-400)||(27675598-27675640)
chr5 (358-400)||(28142986-28143028)
chr5 (347-400)||(25946177-25946230)
chr5 (355-400)||(35641824-35641869)
[»] scaffold0459 (1 HSPs)
scaffold0459 (331-427)||(12884-12982)
[»] scaffold0366 (2 HSPs)
scaffold0366 (331-427)||(10525-10623)
scaffold0366 (331-427)||(14191-14289)
[»] scaffold0092 (1 HSPs)
scaffold0092 (345-427)||(44153-44237)
[»] scaffold0027 (1 HSPs)
scaffold0027 (345-427)||(117453-117537)
[»] scaffold0604 (1 HSPs)
scaffold0604 (358-420)||(1253-1317)
[»] scaffold0051 (1 HSPs)
scaffold0051 (345-422)||(41262-41341)
[»] scaffold0007 (1 HSPs)
scaffold0007 (331-427)||(15247-15345)
[»] scaffold0111 (1 HSPs)
scaffold0111 (311-400)||(38243-38332)
[»] scaffold0221 (1 HSPs)
scaffold0221 (342-400)||(5418-5476)
[»] scaffold0001 (1 HSPs)
scaffold0001 (342-400)||(184008-184066)
[»] scaffold0281 (1 HSPs)
scaffold0281 (358-422)||(13162-13228)
[»] scaffold0204 (1 HSPs)
scaffold0204 (345-400)||(24164-24219)
[»] scaffold0500 (1 HSPs)
scaffold0500 (342-400)||(639-697)
[»] scaffold0340 (1 HSPs)
scaffold0340 (331-397)||(14502-14568)
[»] scaffold1248 (1 HSPs)
scaffold1248 (347-400)||(1420-1473)
[»] scaffold0952 (1 HSPs)
scaffold0952 (347-400)||(840-893)
[»] scaffold0018 (1 HSPs)
scaffold0018 (366-427)||(145635-145696)


Alignment Details
Target: chr3 (Bit Score: 298; Significance: 1e-167; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 21 - 427
Target Start/End: Complemental strand, 45094261 - 45093853
Alignment:
Q  21 ctagttaagaaaagtggaaaacttgaaagaaaaattagtgttatagggatcaaattaacaaagtagtactccaacttaagtgaaatggcgtgtgtagaaa 120  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45094261 ctagttaagaaaagtggaagacttgaaagaaaaacgagtgttatagggatcaaattaacaaagtagtactccaacttaagtgaaatggcgtgtgtagaaa 45094162  T
Q  121 gcaaggttaaggaatgattgtgtgcgtttctcatcccattcatcatggctttgcagcttcatattgggaaacggtgcttggttggttgctctgtaacgtt 220  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45094161 acaaggttaaggaatgattgtgtgcgtttctcatcccattcatcatggttttgcagcttcatattgggaaacggtgcttggttggttgctctgtaacgtt 45094062  T
Q  221 tcaacctcatgttatgttatgtgcactcc----taaaagtttgagctgtannnnnnnnatacacatcttccatgaaaaattctactccctccgtttcctc 316  Q
    |||||||||||||||||||||||||||||    |||||||||||||||||        |||||||| |||||||||||||||||||||||||| | ||||    
T  45094061 tcaacctcatgttatgttatgtgcactccctaataaaagtttgagctgta-tttttttatacacattttccatgaaaaattctactccctccg-tccctc 45093964  T
Q  317 aatggatgatttatttgac-aaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataatcatgtaagatattgt 415  Q
    ||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  45093963 aat-gatgatttatttgacaaaaaaacaatattgacttaacatattttgatcatatttttctactaattcacaacgataaataatcatgtaagatattat 45093865  T
Q  416 tggattcttctc 427  Q
    ||||||| ||||    
T  45093864 tggattcgtctc 45093853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 36665251 - 36665150
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttggattcttc 425  Q
    |||||||||| | ||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||    
T  36665251 tatttgacaatatacattattaacttaacatactttgactatatttttctactaattcacaaagataaataataccatgtaagatattgttggattcatc 36665152  T
Q  426 tc 427  Q
    ||    
T  36665151 tc 36665150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 35717870 - 35717984
Alignment:
Q  315 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatat 412  Q
    ||||| |||||  |||||||||| | ||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  || ||||||||| |    
T  35717870 tcaatagatgacgtatttgacaatatacattattgacttaacatattttgaccatatttttctactaattcacaaagataaataatattatgtaagatgt 35717969  T
Q  413 tgttggattcttctc 427  Q
    |||||||||| ||||    
T  35717970 tgttggattcgtctc 35717984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 7671341 - 7671442
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttc 425  Q
    |||||||||||||||||||||||||||||||  |||||  ||||||||||| ||| |||||||||||||||  |||||||||||| ||||||||||| ||    
T  7671341 tatttgacaaaaaacaatattgacttaacatgttttgacaatatttttctattaactcacaaagataaataatatcatgtaagatgttgttggattcgtc 7671440  T
Q  426 tc 427  Q
    ||    
T  7671441 tc 7671442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 345 - 428
Target Start/End: Complemental strand, 51062606 - 51062521
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctca 428  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||    
T  51062606 tattgacttgacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctca 51062521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 331 - 421
Target Start/End: Original strand, 32285207 - 32285299
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggatt 421  Q
    ||||||| | ||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  32285207 ttgacaatatacattattgacttgacatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggatt 32285299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 299 - 419
Target Start/End: Original strand, 32951136 - 32951257
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||  |||||||  ||||| || ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  32951136 tactccctccgtc-cctcaataaatgatctagttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaata 32951234  T
Q  399 --atcatgtaagatattgttgga 419  Q
      ||||| |||||| ||||||||    
T  32951235 atatcatataagatgttgttgga 32951257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 37833116 - 37833032
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  37833116 tattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 37833032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 299 - 428
Target Start/End: Complemental strand, 53066631 - 53066505
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||  ||| ||| |||||| || ||||||| | | | ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  53066631 tactccctccgtc-ccttaatagatgatctagttgacaatatatattattgacttgacatactttgatcatacttttctactaattcacaaagataaata 53066533  T
Q  399 atcatgtaagatattgttggattcttctca 428  Q
    || || |||||| ||||||||||| |||||    
T  53066532 at-at-taagatgttgttggattcgtctca 53066505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 422
Target Start/End: Complemental strand, 49058072 - 49057993
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||    
T  49058072 tattgacttgacgtactttgatcatatttttctactaattcacaaagataaataatatcatgtaagatgttgttagattc 49057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 10571175 - 10571273
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||  |||| ||||||| ||||||||||||||||    
T  10571175 ttgacaatatacattattgacttgacatactttgaccatatttttatactaatttacaaagataaataatatcaagtaagatgttgttggattcttctc 10571273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 17053094 - 17053004
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  17053094 ttgacaatatacattattgatttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 17053004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 21907226 - 21907128
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  21907226 ttgacaatatacattattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 21907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 38492281 - 38492183
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||||  ||||||||| || ||||||||||| ||||    
T  38492281 ttgacaatatacattattgatttaacatactttgaccatatttttctactaatttacaaagataaataatatcatgtaaaatgttgttggattcgtctc 38492183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 38833893 - 38833795
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  38833893 ttgacaatatacattattgacttgacatattttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 38833795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 7459865 - 7459949
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  7459865 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 7459949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 43138067 - 43137983
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  43138067 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 43137983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 54673994 - 54673910
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||| || || ||||||||||||||||||||||||||| |||||||||||||  ||||| |||||| ||||||||||||||||    
T  54673994 tattgatttgacgtactttgatcatatttttctactaattaacaaagataaataatatcatataagatgttgttggattcttctc 54673910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 427
Target Start/End: Original strand, 29728120 - 29728227
Alignment:
Q  322 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||| || ||||||| | ||| ||||||||| | ||| ||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  29728120 atgatctagttgacaatatacattattgacttgagatattttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 29728219  T
Q  420 ttcttctc 427  Q
    ||| ||||    
T  29728220 ttcgtctc 29728227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 427
Target Start/End: Original strand, 25097234 - 25097316
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| |||| |||||| ||||    
T  25097234 ttgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgtaggattcgtctc 25097316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 54840159 - 54840257
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  54840159 ttgacaatatacattattgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcatctc 54840257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 427
Target Start/End: Original strand, 3547433 - 3547550
Alignment:
Q  313 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcata-tttttctactaattcacaaagataaata--atcatgtaaga 409  Q
    ||||||| |||||  |||||||||| | ||| ||||||||||||||||||||| |||| ||||| ||||| ||||||| ||||||||  || ||||||||    
T  3547433 cctcaatagatgacctatttgacaatatacattattgacttaacatactttgaccatattttttttactatttcacaatgataaataatataatgtaaga 3547532  T
Q  410 tattgttggattcttctc 427  Q
    | ||||||||||| ||||    
T  3547533 tgttgttggattcgtctc 3547550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 428
Target Start/End: Original strand, 52668531 - 52668616
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctca 428  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| |||||| |||| |||||    
T  52668531 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttgaattcgtctca 52668616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 1327528 - 1327444
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  1327528 tattgacttgatatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctc 1327444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 400
Target Start/End: Original strand, 4238494 - 4238594
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||  |||||||  |||| ||| ||||||| | ||| |||| |||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  4238494 tactccctccgtc-cctcaataaatgacttagttgacaatatacattattaacttaatatactttgaccatatttttccactaattcacaaagataaata 4238592  T
Q  399 at 400  Q
    ||    
T  4238593 at 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 8559050 - 8559134
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| ||||  ||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  8559050 tattgacttgatatactttgaccatacatttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 8559134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 18659268 - 18659184
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||||| ||||    
T  18659268 tattgacttgatatactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtctc 18659184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 427
Target Start/End: Complemental strand, 15503270 - 15503155
Alignment:
Q  314 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagata 411  Q
    |||||| |||||| || |||| || | ||| ||||||||||| ||||||||||| |||||||||||||||| | ||||| |||||  || |||||||||     
T  15503270 ctcaatagatgatctagttgataatatacattattgacttaatatactttgatcttatttttctactaatttaaaaagaaaaataatattatgtaagatg 15503171  T
Q  412 ttgttggattcttctc 427  Q
    ||||||||||| ||||    
T  15503170 ttgttggattcgtctc 15503155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 48706891 - 48706958
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  48706891 tattgacttgacatattttgatcatacttttctactaattcacaaagataaataatatcatgtaagat 48706958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 45167529 - 45167431
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||| ||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  45167529 ttgacaatatacattattgacttgacatattttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 45167431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 400
Target Start/End: Complemental strand, 47638285 - 47638216
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| | ||| |||||| || ||||||||||| |||| |||||||||||||||||||||||||||||    
T  47638285 ttgacaatatacattattgatttgacatactttgaccatacttttctactaattcacaaagataaataat 47638216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 48143996 - 48143900
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    |||||||||| | | | ||||||| ||| ||| ||||| |||||||||||||||||| |||||||||||||  |||||||||||| |||||| ||||    
T  48143996 tatttgacaatatatattattgacataatatattttgaccatatttttctactaatttacaaagataaataatatcatgtaagatgttgttgaattc 48143900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 901105 - 901047
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  901105 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 901047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 34669650 - 34669708
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  34669650 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 34669708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 36179153 - 36179095
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||||  ||||||||||||||||||||||||||  |||||||||||||||    
T  36179153 caattttgacttaatttactttgatcatatttttctactaatatacaaagataaataat 36179095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 427
Target Start/End: Complemental strand, 46483788 - 46483682
Alignment:
Q  321 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 418  Q
    |||||| || ||||||| | ||| |||||| || |||||||  || |||| |||||||||||||||||||||||||||  || ||||||||| |||||||    
T  46483788 gatgatctagttgacaatatacattattgatttgacatact--gaccatacttttctactaattcacaaagataaataatattatgtaagattttgttgg 46483691  T
Q  419 attcttctc 427  Q
    |||| ||||    
T  46483690 attcgtctc 46483682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 50673719 - 50673777
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||||| |||||||| |||||||||||||||||  |||||||||||||||    
T  50673719 caattttgacttaacttactttgaccatatttttctactaatatacaaagataaataat 50673777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 424
Target Start/End: Complemental strand, 53275012 - 53274928
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattctt 424  Q
    |||| ||||| |||| || |||||||||||||||||||||||  |||||||||||||  ||||| |||||| ||||| |||||||    
T  53275012 caattttgacctaacttattttgatcatatttttctactaatatacaaagataaataatatcatataagatgttgttagattctt 53274928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 422
Target Start/End: Complemental strand, 3086345 - 3086278
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||||| ||||||||| |||||||  |||||||||||||  ||||| ||||||||||||||||||    
T  3086345 atactttgaccatatttttttactaatatacaaagataaataatatcatataagatattgttggattc 3086278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 10435333 - 10435274
Alignment:
Q  362 ttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    |||| ||||||||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  10435333 ttgaccatatttttctactaattcacaaagataaataatattatgtaagatgttgttgga 10435274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 5030034 - 5030119
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata---atcatgtaagatattgttggattcttctc 427  Q
    ||||||||||| ||||||||| | || ||||||||||||  |||||||||||||   ||||| |||||| ||||||||||| ||||    
T  5030034 tattgacttaatatactttgaccgtacttttctactaatatacaaagataaataattatcatataagatgttgttggattcgtctc 5030119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 410
Target Start/End: Complemental strand, 9145690 - 9145648
Alignment:
Q  368 atatttttctactaattcacaaagataaataatcatgtaagat 410  Q
    |||||||||||||||||||||||||||||||  ||||||||||    
T  9145690 atatttttctactaattcacaaagataaatatacatgtaagat 9145648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 9484638 - 9484696
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  9484638 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 9484696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 12948082 - 12948140
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  12948082 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 12948140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 18013471 - 18013429
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  18013471 tactttgatcatatttttctactaatatacaaagataaataat 18013429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 29455725 - 29455667
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  29455725 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 29455667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 29793395 - 29793337
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  29793395 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 29793337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 34263721 - 34263663
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  34263721 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 34263663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 42098644 - 42098586
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  42098644 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 42098586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 49076443 - 49076385
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  49076443 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 49076385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 34555198 - 34555251
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  34555198 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 34555251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 38833977 - 38833924
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  38833977 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 38833924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 44057587 - 44057542
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||    
T  44057587 acatactttgatcatgtttttctactaatatacaaagataaataat 44057542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 48690269 - 48690185
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| ||||| ||| |  ||||||||||||||||  |||||||||||||  ||||| |||||| ||||||||||| ||||    
T  48690269 tattgacttgacatattttaacaatatttttctactaatatacaaagataaataatatcatataagatgttgttggattcgtctc 48690185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 427
Target Start/End: Original strand, 1778403 - 1778490
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||| |||||||| | |||||||| |||||||||||||||||  ||| |||||||||  ||||| |||||||| ||| ||||| ||||    
T  1778403 caattttgacttagcttactttgaccatatttttctactaatatacatagataaataatatcatataagatatcgttagattcgtctc 1778490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 427
Target Start/End: Complemental strand, 4945868 - 4945781
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  ||| |||||||||  ||||| |||||||| ||| ||||| ||||    
T  4945868 caattttgacctaacttactttgaccatatttttctactaatatacatagataaataatatcatataagatatcgttagattcatctc 4945781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 27849150 - 27849083
Alignment:
Q  362 ttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||| |||| ||||||| ||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  27849150 ttgaccatacttttctattaattaacaaagataaataatatcatgtaagatgttgttggattcgtctc 27849083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 23631598 - 23631551
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||| | |||||||||||||||  |||||||||||||||    
T  23631598 taacatactttgaccgtatttttctactaatatacaaagataaataat 23631551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 427
Target Start/End: Original strand, 26759526 - 26759608
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||| |||| |||||||| |||||||||||||||||  ||| |||||||||  ||||| |||||||| ||| ||||| ||||    
T  26759526 ttgacctaacttactttgaccatatttttctactaatatacatagataaataatatcatataagatatcgttagattcgtctc 26759608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 422
Target Start/End: Complemental strand, 28690707 - 28690653
Alignment:
Q  367 catatttttctactaattcacaaagataaataatcatgtaagatattgttggattc 422  Q
    |||||||||||||||||| |||||||||||| |||  ||||||| |||||||||||    
T  28690707 catatttttctactaatttacaaagataaat-atctcgtaagatgttgttggattc 28690653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 48927808 - 48927761
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  48927808 taacttactttgaccatatttttctactaatatacaaagataaataat 48927761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 4464939 - 4464981
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||||||||||||||  ||| |||||||||||    
T  4464939 tactttgatcatatttttctactaatgtacatagataaataat 4464981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 383
Target Start/End: Complemental strand, 30080745 - 30080715
Alignment:
Q  353 taacatactttgatcatatttttctactaat 383  Q
    |||||||||||||||||||||||||||||||    
T  30080745 taacatactttgatcatatttttctactaat 30080715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 32961288 - 32961346
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  32961288 caattttgacctaacttagtttgaccatatttttctactaatatacaaagataaataat 32961346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 400
Target Start/End: Original strand, 35135764 - 35135818
Alignment:
Q  346 attgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||| | ||||||||||| ||| |||||||||||||  |||||||||||||||    
T  35135764 attgacctgacatactttgaccatgtttttctactaatatacaaagataaataat 35135818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 43370333 - 43370391
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||||| ||||||| |||||||  |||||||||||||||    
T  43370333 caattttgacataacttactttgatcgtatttttatactaatatacaaagataaataat 43370391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 47340085 - 47340043
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||||||||||||||  | |||||||||||||    
T  47340085 tactttgatcatatttttctactaatatataaagataaataat 47340043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 427
Target Start/End: Complemental strand, 3648302 - 3648234
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataatcatgtaagatattgttggattcttctc 427  Q
    |||||||| ||||||||| |||||||  |||||||||||  ||||  |||||||||||||||||| ||||    
T  3648302 tactttgaccatatttttatactaatatacaaagataaa-catcaaataagatattgttggattcgtctc 3648234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 21271897 - 21271950
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||||||||||||| |||| || |||||||  || ||||||||||    
T  21271897 tattgacttaacatactttgatcgtattgttatactaatatacgaagataaata 21271950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 39557595 - 39557546
Alignment:
Q  343 aatattgacttaacatactttgatcatatttttctactaattcacaaaga 392  Q
    |||||| || |||||||||| || ||||||||||||||||| ||||||||    
T  39557595 aatattcacataacatacttagaccatatttttctactaatgcacaaaga 39557546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 397
Target Start/End: Original strand, 1778216 - 1778268
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaat 397  Q
    |||||| |||| ||||||||||||||||||||||| |||  | ||||||||||    
T  1778216 tattgatttaatatactttgatcatatttttctacaaatatataaagataaat 1778268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 427
Target Start/End: Original strand, 29720437 - 29720524
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||| ||||| |||| |||||||||| |||||||| ||||||  | |||||||||||  ||||| |||||| | ||||||||| ||||    
T  29720437 caattttgacctaacttactttgatcctatttttccactaatatataaagataaataatatcatataagatgtcgttggattcgtctc 29720524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 397
Target Start/End: Complemental strand, 30681983 - 30681939
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaat 397  Q
    |||||||| ||||||||||||||||| ||||  ||||||||||||    
T  30681983 taacataccttgatcatatttttctaataatatacaaagataaat 30681939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 34680239 - 34680310
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||| |||||||||||||||||  ||| |||||||||  ||||| |||||||| ||| ||||| ||||    
T  34680239 tactttgaccatatttttctactaatatacatagataaataatatcatataagatatcgttagattcgtctc 34680310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 400
Target Start/End: Complemental strand, 54684679 - 54684627
Alignment:
Q  348 tgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||||| ||||| | |||||||||||||||  |||||||||||||||    
T  54684679 tgactaaacatattttgaccgtatttttctactaatatacaaagataaataat 54684627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 422
Target Start/End: Original strand, 43925074 - 43925198
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||  ||||||| || ||  ||||||| || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43925074 tactccctccgtc-cctcaatagacgacctatttgataatatacattattgacttaacatactttgatcatatttttctactaattcacaaagataaata 43925172  T
Q  399 --atcatgtaagatattgttggattc 422  Q
      |||||||||||| |||||||||||    
T  43925173 atatcatgtaagatgttgttggattc 43925198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 321 - 422
Target Start/End: Complemental strand, 7106518 - 7106415
Alignment:
Q  321 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 418  Q
    |||||| | ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||  ||||||||| || |||||||    
T  7106518 gatgatctctttgacaaaaaacaatattgagttaacatactctaatcatatttttctactaattcacaaagataaataatatcatgtaaaatgttgttgg 7106419  T
Q  419 attc 422  Q
    ||||    
T  7106418 attc 7106415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 321 - 427
Target Start/End: Complemental strand, 4083447 - 4083339
Alignment:
Q  321 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 418  Q
    |||||| |||||||||| | ||| ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||  ||||||||| ||||||||||    
T  4083447 gatgatctatttgacaatatacattattgacttgacatactttgaccatatttttctactaaatcacaaagataaataatatcatgtaaaatattgttgg 4083348  T
Q  419 attcttctc 427  Q
    |||| ||||    
T  4083347 attcgtctc 4083339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 427
Target Start/End: Original strand, 39418020 - 39418149
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    |||||||||||| || | ||||||||| ||| ||||||| | ||| ||||||||| |||||||||||  | |||||||||||||||||||||||||||||    
T  39418020 tactccctccgtctctt-aatggatgacttagttgacaatatacattattgacttgacatactttgactacatttttctactaattcacaaagataaata 39418118  T
Q  399 --atcatgtaagatattgttggattcttctc 427  Q
      |||||||||||| ||||||||||| ||||    
T  39418119 atatcatgtaagatgttgttggattcgtctc 39418149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 422
Target Start/End: Complemental strand, 1110514 - 1110429
Alignment:
Q  339 aaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  1110514 aaacattattgatttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattc 1110429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 38963735 - 38963651
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||| ||||    
T  38963735 tattgacttgacgtactttgatcatatttttctactaattcacaaagataaataatattatgtaagatattgttggattcgtctc 38963651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 348 - 421
Target Start/End: Original strand, 38137579 - 38137654
Alignment:
Q  348 tgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggatt 421  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  38137579 tgacttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggatt 38137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 299 - 427
Target Start/End: Complemental strand, 20517679 - 20517550
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||| ||| |||  |||| ||| ||||||| |  || ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  20517679 tactccctccgtt-ccttaataaatgacttagttgacaatatgcattattgacttgatatactttgaccatatttttctactaattcacaaagataaata 20517581  T
Q  399 --atcatgtaagatattgttggattcttctc 427  Q
      |||||||||||| ||||||||||| ||||    
T  20517580 atatcatgtaagatgttgttggattcgtctc 20517550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 332507 - 332423
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    |||||||||| | ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||||    
T  332507 tatttgacaatatacattattgacttaacatactttgattatatttttttactaattcacaaagataaataatatcatgtaagat 332423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 313 - 427
Target Start/End: Original strand, 13399118 - 13399234
Alignment:
Q  313 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||| |||||| || ||||||| | ||| |||||||||||||| |||| | |||||||||||||||||| |||||||||||||  |||||||||| |    
T  13399118 cctcaatagatgatctagttgacaatatacattattgacttaacattctttaaccatatttttctactaatttacaaagataaataatatcatgtaagct 13399217  T
Q  411 attgttggattcttctc 427  Q
     ||||||||||| ||||    
T  13399218 gttgttggattcgtctc 13399234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 18718455 - 18718371
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  18718455 tattgacttgatatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 18718371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 42038762 - 42038655
Alignment:
Q  322 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    |||||| | ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  42038762 atgattcagttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatataagatgttgttgga 42038663  T
Q  420 ttcttctc 427  Q
    ||| ||||    
T  42038662 ttcgtctc 42038655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 9877114 - 9877212
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||  ||||| |||||| ||||||||||| ||||    
T  9877114 ttgacaatatacattattgacttgacatactttgaccatatttttttactaattcacaaagataaataatatcatataagatgttgttggattcgtctc 9877212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 3987289 - 3987361
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  3987289 atactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 3987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 44283324 - 44283408
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  44283324 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 44283408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 427
Target Start/End: Original strand, 7442913 - 7443020
Alignment:
Q  322 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||| || ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||||||| |  |||||||||||| ||||||||    
T  7442913 atgatctagttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaaaaatatcatgtaagatgttgttgga 7443012  T
Q  420 ttcttctc 427  Q
    ||| ||||    
T  7443013 ttcgtctc 7443020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 299 - 427
Target Start/End: Original strand, 42020203 - 42020333
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatacttt-gatcatatttttctactaattcacaaagataaat 397  Q
    ||||||||||||  ||||||| ||| |  |||||||||| | ||| |||||| |||||||||||| || |||||| ||||||||||||||||| ||||||    
T  42020203 tactccctccgtc-cctcaatagataacctatttgacaatatacattattgatttaacatactttagaccatattattctactaattcacaaatataaat 42020301  T
Q  398 a--atcatgtaagatattgttggattcttctc 427  Q
    |  |||||||||||| ||||||||||| ||||    
T  42020302 aatatcatgtaagatgttgttggattcgtctc 42020333  T

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Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 30708958 - 30708860
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| | ||| ||||| |||||||||||||||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  30708958 ttgacaatatacattattgacttgatatattttgaccatatttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctc 30708860  T

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Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 14372293 - 14372209
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||||| |||||||||  |||||||||| ||||||||||| ||||    
T  14372293 tattgacttgatatactttgaccatacttttctactaattcacaaatataaataataacatgtaagatgttgttggattcgtctc 14372209  T

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Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 16941856 - 16941940
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||| ||||  || ||||||||| ||||||||||| ||||    
T  16941856 tattgacttgatatactttgatcatacttttctactaattcacaaagatgaataatattatgtaagatgttgttggattcgtctc 16941940  T

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Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 17012521 - 17012605
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||| ||||  || ||||||||| ||||||||||| ||||    
T  17012521 tattgacttgatatactttgatcatacttttctactaattcacaaagatgaataatattatgtaagatgttgttggattcgtctc 17012605  T

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Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 34827128 - 34827044
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  34827128 tattgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 34827044  T

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Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 41172802 - 41172886
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaat--aatcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | |||||||||||||| ||||||| ||||||||||||||||||   |||||||||||| ||||||||||| ||||    
T  41172802 tattgacttgatatactttgatcatacttttctattaattcacaaagataaatgatatcatgtaagatgttgttggattcgtctc 41172886  T

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Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 422
Target Start/End: Original strand, 24282973 - 24283084
Alignment:
Q  313 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||| |||||| || ||||||| | | | |||||| || ||||| |||||  |||||||| ||||||||||||||||||||||  ||||||||||||    
T  24282973 cctcaatagatgatctagttgacaatatatattattgatttgacatattttgactatatttttttactaattcacaaagataaataatatcatgtaagat 24283072  T
Q  411 attgttggattc 422  Q
     |||||||||||    
T  24283073 gttgttggattc 24283084  T

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Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 427
Target Start/End: Original strand, 41463539 - 41463646
Alignment:
Q  322 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||| || ||||||| | ||| |||||| || ||||||||| | || ||||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  41463539 atgatctagttgacaatatacattattgatttgacatactttcaccacatttttctactaatttacaaagataaataatatcatgtaagatgttgttgga 41463638  T
Q  420 ttcttctc 427  Q
    ||| ||||    
T  41463639 ttcgtctc 41463646  T

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Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 427
Target Start/End: Complemental strand, 27559789 - 27559707
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  27559789 ttgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 27559707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 40598359 - 40598269
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| |||| | |||| ||||||||| |||||||||||| |||||||||||||||||||  |||||||||||| ||||||||    
T  40598359 ttgacaatatacattattaatttaatatactttgaccatatttttctaataattcacaaagataaataatatcatgtaagatgttgttgga 40598269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 44330614 - 44330516
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||| | || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  44330614 ttgacaatatacattattgacttgacatactttaaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 44330516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 14707580 - 14707663
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| |  |||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  14707580 tattgacttgatgtactttga-catacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 14707663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 427
Target Start/End: Complemental strand, 23671580 - 23671508
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| |||| |||||||||||||||||||||||||||  ||||| |||||| ||||||||||| ||||    
T  23671580 atactttgaccatacttttctactaattcacaaagataaataatatcatataagatgttgttggattcgtctc 23671508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 400
Target Start/End: Original strand, 32775934 - 32776003
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| | ||| ||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||    
T  32775934 ttgacaatatacattattgacttgacatactttgaccatatttttctactaattcactaagaaaaataat 32776003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 36199008 - 36199080
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | || |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  36199008 atactttgaccgtacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 36199080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 40425306 - 40425378
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| |||| |||||||||||||| ||||||||||||  |||||||||||| ||||||||||| ||||    
T  40425306 atactttgaccatacttttctactaattcgcaaagataaataatatcatgtaagatgttgttggattcgtctc 40425378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 427
Target Start/End: Original strand, 4045262 - 4045362
Alignment:
Q  329 atttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttct 426  Q
    ||||||||| | ||| | ||||||| ||||| ||||| || |||||| |||||||| |||||||||||||  ||||||||| || ||||||||||| |||    
T  4045262 atttgacaatatacattgttgacttgacatattttgaccacatttttatactaatttacaaagataaataatatcatgtaaaatgttgttggattcgtct 4045361  T
Q  427 c 427  Q
    |    
T  4045362 c 4045362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 427
Target Start/End: Original strand, 12209031 - 12209118
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||  ||||| |||||| | ||||||||| ||||    
T  12209031 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatgtcgttggattcatctc 12209118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 18733968 - 18734054
Alignment:
Q  343 aatattgacttaacatactttgatcatatttttctactaattcacaaagataaataa--tcatgtaagatattgttggattcttctc 427  Q
    ||||||||||||||||| ||||||  |||||||||||||||  || |||||||| ||  ||||||||||| ||||| ||||| ||||    
T  18733968 aatattgacttaacatattttgattgtatttttctactaatatacgaagataaaaaatttcatgtaagatgttgtttgattcgtctc 18734054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 427
Target Start/End: Complemental strand, 4046055 - 4045982
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaata---atcatgtaagatattgttggattcttctc 427  Q
    ||||||||||  |||| ||||||||||||||||||||||||| |   |||||||||||| ||||||||||| ||||    
T  4046055 acatactttg--catacttttctactaattcacaaagataaaaatatatcatgtaagatgttgttggattcgtctc 4045982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 7724632 - 7724574
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  7724632 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 7724574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 8373476 - 8373534
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  8373476 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 8373534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 8896313 - 8896371
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  8896313 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 8896371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 30776245 - 30776322
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataatcatgtaagatattgttggattcttctc 427  Q
    ||||||||| |||||||||||  ||||||||||||||||| ||||||||     ||||||| |||| ||||||||||| ||||    
T  30776245 tattgacttgacatactttgacaatatttttctactaatttacaaagat-----atcatgtgagatgttgttggattcgtctc 30776322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 38963837 - 38963895
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  38963837 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 38963895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 40471778 - 40471836
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||||| || ||||||||||||||| |||||||  |||||||||||||||    
T  40471778 caattttgacttaacttattttgatcatatttttttactaatatacaaagataaataat 40471836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 16127796 - 16127743
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| ||||||||||||||||||| ||||||  |||||||||||||||    
T  16127796 ttgacctaacttactttgatcatatttttccactaatatacaaagataaataat 16127743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 41436879 - 41436932
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  41436879 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 41436932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 427
Target Start/End: Complemental strand, 43409489 - 43409417
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| |||||||||||| ||||  |||||||||||||  |||||  ||||||||||||||||| ||||    
T  43409489 atactttgaccatatttttctattaatatacaaagataaataatatcataaaagatattgttggattcgtctc 43409417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 3037929 - 3037874
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| ||||||| |||||||| |||||| |||||||  |||||||||||||||    
T  3037929 tattgacctaacatattttgatcacatttttttactaatatacaaagataaataat 3037874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 400
Target Start/End: Original strand, 4137470 - 4137509
Alignment:
Q  361 tttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  4137470 tttgatcatatttttctactaatatacaaagataaataat 4137509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 400
Target Start/End: Original strand, 5096289 - 5096348
Alignment:
Q  341 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| ||||| |||| || |||||||||||||||||||||||  | |||||||||||||    
T  5096289 acaattttgacataacttattttgatcatatttttctactaatatataaagataaataat 5096348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 427
Target Start/End: Original strand, 27668005 - 27668087
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| ||||||||||| |||||||||||| ||||   ||||||||||||  ||||| ||| || ||||||||||| ||||    
T  27668005 ttgacttgacatactttgaccatatttttctagtaatatgcaaagataaataatatcatataaaatgttgttggattcgtctc 27668087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 42951599 - 42951545
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||| ||||||||||||||  |||||||| ||||||||||||| ||||||||||    
T  42951599 tattgatttaacatactttgacaatattttt-tactaattcacaacgataaataat 42951545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 43328811 - 43328764
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  43328811 taacttactttgaccatatttttctactaatatacaaagataaataat 43328764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 410
Target Start/End: Original strand, 2831754 - 2831819
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||| |||| |||||||| |||||||||||||||||  ||||| |||||||  ||||||||||||    
T  2831754 ttgacctaacttactttgaccatatttttctactaatatacaaatataaataatatcatgtaagat 2831819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 6075167 - 6075225
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||| ||||| |||||||| |||||||||||| ||||  |||||||||||||||    
T  6075167 caattttgatttaacttactttgaccatatttttctattaatatacaaagataaataat 6075225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 16126103 - 16126045
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||| ||||||  |||||||||||||||    
T  16126103 caattttgacctaacttactttgaccatatttttccactaatatacaaagataaataat 16126045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 37987941 - 37987899
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||||||||||| |||||||  |||||||||||||||    
T  37987941 tactttgatcatatttttttactaatatacaaagataaataat 37987899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 5030339 - 5030384
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||| ||||||| |||||||  |||||||||||||||    
T  5030339 acatactttgatcgtatttttatactaatatacaaagataaataat 5030384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 10333594 - 10333541
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  10333594 ttgacctaacttattttgaccatatttttctactaatatacaaagataaataat 10333541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 11277593 - 11277634
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaat 383  Q
    |||| ||||| |||| ||||||||||||||||||||||||||    
T  11277593 caattttgacataacttactttgatcatatttttctactaat 11277634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 32776221 - 32776168
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| |||||||||   |||||||||||||||||  |||||||||||||||    
T  32776221 ttgactttacatactttagccatatttttctactaatatacaaagataaataat 32776168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 33046256 - 33046199
Alignment:
Q  343 aatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||| || || |||| |||||| ||||||||||||||||  |||||||||||||||    
T  33046256 aatattaacctagcatattttgattatatttttctactaatatacaaagataaataat 33046199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 421
Target Start/End: Original strand, 37806849 - 37806905
Alignment:
Q  367 catatttttctactaattcacaaagataaata--atcatgtaagatattgttggatt 421  Q
    |||||||||||||||||  |||||||||||||  || || |||||||||||||||||    
T  37806849 catatttttctactaatatacaaagataaataatattatataagatattgttggatt 37806905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 42951539 - 42951472
Alignment:
Q  361 tttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||| ||||||||| ||||||||||||| ||||||||  || ||||||||| ||||||||||| ||||    
T  42951539 tttgaccatattttt-tactaattcacaacgataaataatataatgtaagatgttgttggattcgtctc 42951472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 45036410 - 45036463
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||| |||  ||| |||||||||||||||||  |||||||||||||||    
T  45036410 ttgacttaacttacgctgaccatatttttctactaatatacaaagataaataat 45036463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 6730104 - 6730037
Alignment:
Q  362 ttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||| |||||||||||||||||  ||| |||||||||  ||||| |||||||| ||||||||| ||||    
T  6730104 ttgaccatatttttctactaatatacatagataaataatatcatataagatatcgttggattcgtctc 6730037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 11384047 - 11383996
Alignment:
Q  361 tttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    |||||||||||||||||||||||  | |||||||||||  ||||||||||||    
T  11384047 tttgatcatatttttctactaatatataaagataaataatatcatgtaagat 11383996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 15177421 - 15177469
Alignment:
Q  352 ttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||||||| ||||||||| |||||||  |||||||||||||||    
T  15177421 ttaacttactttgaccatatttttatactaatatacaaagataaataat 15177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 427
Target Start/End: Complemental strand, 31603437 - 31603350
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||| ||||| |||| ||||||||  ||||||||||||||||  ||||| |||||||  ||||| |||||||| ||| ||||| ||||    
T  31603437 caattttgacctaacttactttgacaatatttttctactaatatacaaatataaataatatcatataagatatcgttagattcatctc 31603350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 397
Target Start/End: Original strand, 41491995 - 41492039
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaat 397  Q
    ||||||| |||||| ||||||||||||||| | ||||||||||||    
T  41491995 taacatattttgatgatatttttctactaagttacaaagataaat 41492039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 313 - 427
Target Start/End: Original strand, 20167590 - 20167706
Alignment:
Q  313 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||| |||||| |||||||||| | ||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||  ||||||||||||    
T  20167590 cctcaatagatgatctatttgacaatatacactattgacttaacatattttgataatatttttctactaattcacaaaaataaataatatcatgtaagat 20167689  T
Q  411 attgttggattcttctc 427  Q
     ||||||||||| ||||    
T  20167690 gttgttggattcgtctc 20167706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 345 - 422
Target Start/End: Complemental strand, 25256549 - 25256470
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||| |||||||||||    
T  25256549 tattgacttaacatactttgatcatatttttctactaatttacaaagataaataatatcatgtaagatgttgttggattc 25256470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 886097 - 886198
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttc 425  Q
    |||||||||| | ||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||| |||||| ||    
T  886097 tatttgacaatatacattattaacttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgtcggattcgtc 886196  T
Q  426 tc 427  Q
    ||    
T  886197 tc 886198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 422
Target Start/End: Complemental strand, 10658223 - 10658114
Alignment:
Q  315 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatat 412  Q
    ||||| |||||| |||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||| ||||| |||||||  || ||||||||| |    
T  10658223 tcaatagatgatctatttgacaatatacattattgacttaacatactttgaccatatttttctactaattaacaaatataaataatattatgtaagatgt 10658124  T
Q  413 tgttggattc 422  Q
    ||||||||||    
T  10658123 tgttggattc 10658114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 419
Target Start/End: Original strand, 31127850 - 31127926
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  31127850 tattgacttaatatactttgatcatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 31127926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 6471075 - 6470977
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| |||||||||||||||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||||| ||||    
T  6471075 ttgacaatatacattattgacttgacatactttgatcatacttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtctc 6470977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 30380760 - 30380662
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  30380760 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 30380662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 13138177 - 13138261
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  13138177 tattgacttgacatattttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 13138261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 3293132 - 3293230
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  3293132 ttgacaatatacattattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 3293230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 18809506 - 18809416
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  18809506 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatataagatgttgttgga 18809416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 410
Target Start/End: Complemental strand, 44123916 - 44123819
Alignment:
Q  315 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||| |||||  |||||||||| | ||| | ||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||||||||||    
T  44123916 tcaatagatgacctatttgacaatatacattgttgacttaacatactttcaccatatttttctactaattcacaaagataaataatatcatgtaagat 44123819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 23249068 - 23248984
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  23249068 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 23248984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 29791158 - 29791074
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  29791158 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 29791074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 30290140 - 30290056
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  30290140 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 30290056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 43066342 - 43066258
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  43066342 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 43066258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 345 - 422
Target Start/End: Complemental strand, 14847425 - 14847346
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||  || || ||||||||||||||||||    
T  14847425 tattaactttacatactttgaccatatttttctactaattcacaaagataaataatattatttaagatattgttggattc 14847346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 8350911 - 8351009
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||||||||||| ||||| | |||||||||||  |||||||||||| ||||||||||| ||||    
T  8350911 ttgacaatatacattattgacttgacatactttgaccatatttttctattaatttagaaagataaataatatcatgtaagatgttgttggattcgtctc 8351009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 427
Target Start/End: Complemental strand, 38845821 - 38845739
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| ||||||||||| || |||||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  38845821 ttgacttgacatactttgaccacatttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 38845739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 410
Target Start/End: Complemental strand, 45253993 - 45253895
Alignment:
Q  314 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    |||||| |||||  || ||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||  ||||||||||||    
T  45253993 ctcaatagatgacctagttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagaaaaataatatcatgtaagat 45253895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 37710129 - 37710036
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||| | ||| ||||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  37710129 ttgacaatatacattattgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattc 37710036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 1580810 - 1580894
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||| || ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  1580810 tattgagttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctc 1580894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 427
Target Start/End: Original strand, 2805522 - 2805605
Alignment:
Q  346 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||| | ||||||||| |||| ||||||||||||||||||||| |||||  |||||||||||| ||||||||||| ||||    
T  2805522 attgacttgatatactttgaccatacttttctactaattcacaaagaaaaataatatcatgtaagatgttgttggattcgtctc 2805605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 2986564 - 2986457
Alignment:
Q  322 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    |||| ||| ||||||| | ||| ||||||||| ||||| ||||| |||| ||||||||||||| |||||||| ||||  |||||||||||| ||||||||    
T  2986564 atgacttagttgacaatatacattattgacttgacatattttgaccatacttttctactaatttacaaagattaataatatcatgtaagatgttgttgga 2986465  T
Q  420 ttcttctc 427  Q
    ||| ||||    
T  2986464 ttcgtctc 2986457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 422
Target Start/End: Complemental strand, 3383648 - 3383546
Alignment:
Q  321 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 418  Q
    |||||| |||||||||| | | | ||||||||||| ||||| |||||||||||||  |||||||||||||||||||||  |||||| ||||| |||||||    
T  3383648 gatgatatatttgacaatatatattattgacttaatatactgtgatcatattttttcactaattcacaaagataaataatatcatg-aagatgttgttgg 3383550  T
Q  419 attc 422  Q
    ||||    
T  3383549 attc 3383546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 12893761 - 12893677
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    |||||||||| |  || ||||||||||||||||||||| ||||||||||||  |||| |||||||||||||  ||||||||||||    
T  12893761 tatttgacaatatgcattattgacttaacatactttgaccatatttttctatcaatttacaaagataaataatatcatgtaagat 12893677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 38739873 - 38739789
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||| || ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  38739873 tattgatttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 38739789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 427
Target Start/End: Complemental strand, 39361329 - 39361257
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||||||||| ||||||| |||||||||||||||||||  ||||| |||||| ||||||||||| ||||    
T  39361329 atactttgatcatacttttctattaattcacaaagataaataatatcatataagatgttgttggattcgtctc 39361257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 427
Target Start/End: Complemental strand, 45082016 - 45081944
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||| || |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  45082016 atacttcgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 45081944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 40013881 - 40013783
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| || ||||||||||| |||||||  |||||||||||| |||||| |||| ||||    
T  40013881 ttgacaatatacattattgacttgacatactttgaccatacttttatattaattcacaaatataaataatatcatgtaagatgttgttgaattcgtctc 40013783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 14522609 - 14522517
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||| | ||| ||||||||| | ||||||||| |||| ||||||||||||| ||||||||||| |  |||||||||||| |||||||||||    
T  14522609 ttgacaatatacattattgacttgatatactttgaccatacttttctactaatt-acaaagataaaaaatatcatgtaagatgttgttggattc 14522517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 428
Target Start/End: Complemental strand, 35584190 - 35584105
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctca 428  Q
    ||||||| ||| ||| |||||||||||||||||| ||||  |||||||||||||  ||||| |||||||||||| ||||| |||||    
T  35584190 tattgacctaatatattttgatcatatttttctattaatatacaaagataaataatatcatataagatattgttagattcgtctca 35584105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 40645651 - 40645709
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  40645651 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 40645709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 11854736 - 11854656
Alignment:
Q  350 acttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctca 428  Q
    |||||| |||| || | ||||||||||||||||||||||||||||||||  ||| |||||||| |||||||| || |||||    
T  11854736 acttaatataccttaaccatatttttctactaattcacaaagataaataatatcctgtaagatgttgttggaatcgtctca 11854656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 421
Target Start/End: Original strand, 20671303 - 20671379
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggatt 421  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||  ||||| |||||||||||| ||||    
T  20671303 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataatatcatataagatattgttagatt 20671379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 23764510 - 23764578
Alignment:
Q  361 tttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||||||||||||| ||||||||||||| |||||  |||||||||||| |||||| |||| ||||    
T  23764510 tttgatcatatttttctattaattcacaaagaaaaataatatcatgtaagatgttgttgaattcgtctc 23764578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 38842210 - 38842263
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  38842210 ttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 38842263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 4327127 - 4327080
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  4327127 taacttactttgatcatatttttctactaatatacaaagataaataat 4327080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 6470645 - 6470743
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| |||||| || | ||| |||||  ||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||||| ||||    
T  6470645 ttgacaatatacattattgatttgagatattttgacgatacttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtctc 6470743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 13888646 - 13888591
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||| |||||||||||||| | |||||||||||||||  |||||||||||||||    
T  13888646 tattgatttaacatactttgaccgtatttttctactaatatacaaagataaataat 13888591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 21132947 - 21132889
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||||| |||||||| |||||||||||||||||  ||||||| |||||||    
T  21132947 caattttgacttaacttactttgaccatatttttctactaatatacaaagaaaaataat 21132889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 25691616 - 25691558
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  25691616 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 25691558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 30464474 - 30464532
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  30464474 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 30464532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 427
Target Start/End: Original strand, 17523858 - 17523934
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||| |||||||||||||||||||| |||||  |||||||||||||  ||||| |||||||| ||| ||||| ||||    
T  17523858 taacttactttgatcatatttttctgctaatatacaaagataaataatatcatataagatatcgtttgattcgtctc 17523934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 421
Target Start/End: Complemental strand, 29917942 - 29917866
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggatt 421  Q
    ||||| |||| || ||||| |||||||||||||||||  |||||||||||||  ||||| |||||||||||| ||||    
T  29917942 ttgacctaacttattttgaccatatttttctactaatatacaaagataaataatatcatataagatattgttagatt 29917866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 427
Target Start/End: Complemental strand, 8496905 - 8496818
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||| ||||| |||| |||||||| ||||||||||||| |||  |||||||||||||  ||||| |||||||| ||| ||||| ||||    
T  8496905 caattttgacctaacttactttgaccatatttttctacgaatatacaaagataaataatatcatataagatatcgttagattcgtctc 8496818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 422
Target Start/End: Original strand, 9302399 - 9302477
Alignment:
Q  347 ttgacttaacatactttgatcatat-ttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    |||||||||||||  |||||||||| ||||||| ||||| |||||||||||||  || ||||||||| |||||| ||||    
T  9302399 ttgacttaacatatattgatcatatattttctattaatttacaaagataaataatattatgtaagatgttgttgaattc 9302477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Original strand, 23547121 - 23547168
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||||||| ||||||||||||||||  |||||||||||||||    
T  23547121 taacttactttgataatatttttctactaatatacaaagataaataat 23547168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 29616334 - 29616287
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||||||||||| |||||||||  |||||||||||||||    
T  29616334 taacttactttgatcatatttgtctactaatatacaaagataaataat 29616287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Original strand, 30653413 - 30653460
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  30653413 taacttactttgaccatatttttctactaatatacaaagataaataat 30653460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 427
Target Start/End: Complemental strand, 42786112 - 42786030
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| ||| | ||||| |||||||||||| ||||  |||||||||||||  ||||| |||||| ||||||||||| ||||    
T  42786112 ttgacttgacacattttgaccatatttttctattaatatacaaagataaataatatcatataagatgttgttggattcgtctc 42786030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 400
Target Start/End: Original strand, 44039886 - 44039925
Alignment:
Q  361 tttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  44039886 tttgatcatatttttctactaatatacaaagataaataat 44039925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 3466325 - 3466383
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||||  |||||||||||||||  |||||||||||||||    
T  3466325 caattttgacctaacttactttgattttatttttctactaatatacaaagataaataat 3466383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 15870233 - 15870275
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||||||||||||||  ||||| |||||||||    
T  15870233 tactttgatcatatttttctactaatatacaaaaataaataat 15870275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 25009202 - 25009244
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  25009202 tactttgaccatatttttctactaatatacaaagataaataat 25009244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 427
Target Start/End: Complemental strand, 7431327 - 7431251
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| ||||| || ||||||||||||||  |||||||||||||  ||||| |||||| ||||| ||||| ||||    
T  7431327 taacatattttgaccacatttttctactaatatacaaagataaataatatcatataagatgttgttagattcgtctc 7431251  T

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Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 43184793 - 43184740
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  ||||| |||||||||    
T  43184793 ttgacctaacttactttgaccatatttttctactaatatacaaaaataaataat 43184740  T

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Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 397
Target Start/End: Complemental strand, 11335434 - 11335390
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaat 397  Q
    ||||||||||||| |||||||||||||||||  ||||||| ||||    
T  11335434 taacatactttgaccatatttttctactaatatacaaagacaaat 11335390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 23437814 - 23437774
Alignment:
Q  360 ctttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||| |||||||||||||||||  |||||||||||||||    
T  23437814 ctttgaccatatttttctactaatatacaaagataaataat 23437774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 26627970 - 26628025
Alignment:
Q  368 atatttttctactaattcacaaagataaata--atcatgtaagatattgttggatt 421  Q
    ||||||||||| ||||  |||||||||||||  ||||| |||||||||||||||||    
T  26627970 atatttttctattaatatacaaagataaataatatcatataagatattgttggatt 26628025  T

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Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 313 - 427
Target Start/End: Original strand, 44389299 - 44389415
Alignment:
Q  313 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||| |||||| |||||||||| | ||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||  ||||||||||||    
T  44389299 cctcaatagatgatctatttgacaatatacactattgacttaacatattttgataatatttttctactaattcacaaaaataaataatatcatgtaagat 44389398  T
Q  411 attgttggattcttctc 427  Q
     ||||||||||| ||||    
T  44389399 gttgttggattcgtctc 44389415  T

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Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 314 - 427
Target Start/End: Original strand, 18795154 - 18795269
Alignment:
Q  314 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagata 411  Q
    |||||| ||| | ||||||||||| | | | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||     
T  18795154 ctcaatagatcacttatttgacaatatatattattgacttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatg 18795253  T
Q  412 ttgttggattcttctc 427  Q
    ||||||||||| ||||    
T  18795254 ttgttggattcgtctc 18795269  T

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Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 47713533 - 47713631
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  47713533 ttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 47713631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 48531552 - 48531454
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  48531552 ttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 48531454  T

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Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 419
Target Start/End: Original strand, 37231594 - 37231684
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  37231594 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 37231684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 44479752 - 44479850
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  44479752 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 44479850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 427
Target Start/End: Complemental strand, 46657871 - 46657765
Alignment:
Q  323 tgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggat 420  Q
    |||| |||||||||| | ||| |||||||||||||| |||||| |||||||||||| ||||| |||||||||||||  |||||||||||| |||||||||    
T  46657871 tgatctatttgacaacatacattattgacttaacattctttgaccatatttttctattaatttacaaagataaataatatcatgtaagatgttgttggat 46657772  T
Q  421 tcttctc 427  Q
    || ||||    
T  46657771 tcgtctc 46657765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 32618987 - 32619071
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  32618987 tattgactttatatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 32619071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 36819912 - 36819828
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  36819912 tattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 36819828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 10464146 - 10464244
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||||| ||||||||| |||||||||||||||||||| |||||||||||  ||||| |||||| |||||||| |||||||    
T  10464146 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcataaagataaataatatcatataagatgttgttggaatcttctc 10464244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 21392248 - 21392150
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||| ||||| ||||    
T  21392248 ttgacaatatacattattaacttgacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttagattcgtctc 21392150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 31466389 - 31466487
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  31466389 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctc 31466487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 31497722 - 31497827
Alignment:
Q  313 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataatcatgtaagatat 412  Q
    |||||||  |||| ||||||||||| | ||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||    |||||||||||| |    
T  31497722 cctcaatacatgacttatttgacaatatacattattgacttaatataatttgaccatatttttctactaattcacaaagata---tatcatgtaagatgt 31497818  T
Q  413 tgttggatt 421  Q
    |||||||||    
T  31497819 tgttggatt 31497827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 2400501 - 2400417
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  2400501 tattgactttatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 2400417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 400
Target Start/End: Original strand, 34478039 - 34478108
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| | ||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34478039 ttgacaatatacattattgatttaacatactttgaccatatttttctactaattcacaaagataaataat 34478108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 36859265 - 36859337
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  36859265 atactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 36859337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 4612118 - 4612216
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  4612118 ttgacaatatacattattgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 4612216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 419
Target Start/End: Original strand, 35500778 - 35500868
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| |||||||||  ||||||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  35500778 ttgacaatatacattattgacttaagatactttgactatatttttctactaattcataaagataaataatatcatgtaagatgttgttgga 35500868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 47538153 - 47538055
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||| ||||| |||||| |||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  47538153 ttgacaatatacattatggacttgacataccttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 47538055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 422
Target Start/End: Original strand, 23474000 - 23474093
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||| ||||||||| |||||||||||||  |||||||||||| |||||||||||    
T  23474000 ttgacaatatacattattgactttacatactttgaccatactttcctactaatttacaaagataaataatatcatgtaagatgttgttggattc 23474093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 37950990 - 37951074
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||| |||||||||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  37950990 tattgacttgatatattttgatcatacttttttactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 37951074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 42086683 - 42086767
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||| ||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  42086683 tattgacttgatatattttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 42086767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 42834349 - 42834421
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  42834349 atactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 42834421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 47081196 - 47081112
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||| ||||||||||||||  |||||||||||| ||||||||||| ||||    
T  47081196 tattgacttgatatactttgaccatacttttctactaatccacaaagataaataatatcatgtaagatgttgttggattcgtctc 47081112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 427
Target Start/End: Complemental strand, 36905741 - 36905658
Alignment:
Q  346 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||| |||||||||||  ||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  36905741 attgacttgacatactttgactatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 36905658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 19072999 - 19072901
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| |||||| || ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||| ||||||| ||||    
T  19072999 ttgacaatatacattattgatttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgctggattcgtctc 19072901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 36643392 - 36643302
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| |||||| |||| ||||||||| |||||||||| |||||||||||||||||||||  ||||| |||||| ||||||||    
T  36643392 ttgacaatatacattattgatttaatatactttgaccatatttttccactaattcacaaagataaataatatcatataagatgttgttgga 36643302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 28185456 - 28185523
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||    
T  28185456 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagat 28185523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 7314364 - 7314309
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| ||||||||||||| |||||||||||||||||  |||||||||||||||    
T  7314364 tattgacctaacatactttgaccatatttttctactaatatacaaagataaataat 7314309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 27248866 - 27248780
Alignment:
Q  343 aatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||  |||||||||||||||| ||||||||||||||  ||||| |||| ||  ||||| |||||||||||||||||| ||||    
T  27248866 aatattgaactaacatactttgatcagatttttctactaatatacaaaaataattaatatcatataagatattgttggattcgtctc 27248780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 422
Target Start/End: Complemental strand, 31110840 - 31110762
Alignment:
Q  346 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    |||||||| | |||||||||  ||| |||| ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  31110840 attgacttgaaatactttgactatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattc 31110762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 410
Target Start/End: Complemental strand, 33613451 - 33613362
Alignment:
Q  322 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    |||||||||||||| | | ||| ||||||||||| ||| ||||| ||||||||| |||||||||||||| |||||||  ||||||||||||    
T  33613451 atgatttatttgaccatatacattattgacttaatata-tttgaccatatttttttactaattcacaaaaataaataatatcatgtaagat 33613362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 29770546 - 29770603
Alignment:
Q  372 ttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||    
T  29770546 ttttctactaattcacaaagataaataatatcatggaagatgttgttggattcttctc 29770603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 346 - 400
Target Start/End: Original strand, 42493563 - 42493617
Alignment:
Q  346 attgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||| ||||||||||||| |||||||||||||||||  |||||||||||||||    
T  42493563 attgacctaacatactttgaccatatttttctactaatatacaaagataaataat 42493617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 422
Target Start/End: Original strand, 23348398 - 23348480
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    |||||||||  ||||||||||||| ||||||||| |||||||  |||||||||||||  ||||| ||| || |||||||||||    
T  23348398 caatattgaactaacatactttgaccatatttttttactaatatacaaagataaataacatcatataaaatgttgttggattc 23348480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 16807168 - 16807110
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  16807168 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 16807110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 30462243 - 30462185
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||||| |||||||| ||||||||| |||||||  |||||||||||||||    
T  30462243 caattttgacttaacttactttgaccatatttttttactaatatacaaagataaataat 30462185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 38069093 - 38069151
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  38069093 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 38069151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 9173353 - 9173300
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  9173353 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 9173300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 427
Target Start/End: Complemental strand, 2450895 - 2450817
Alignment:
Q  352 ttaacatactttgatcatatttttctactaattcacaaagataaata---atcatgtaagatattgttggattcttctc 427  Q
    |||||||| ||| | |||||||||||| ||||||||||||||||| |   || ||||||||| ||||||||||| ||||    
T  2450895 ttaacatattttaaccatatttttctattaattcacaaagataaaaaaatattatgtaagatgttgttggattcgtctc 2450817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Original strand, 28016168 - 28016215
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  28016168 taacttactttgaccatatttttctactaatatacaaagataaataat 28016215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 38198675 - 38198613
Alignment:
Q  367 catatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||||||||||||  |||||||||||||  ||||| |||||| ||||||||||| ||||    
T  38198675 catatttttctactaatatacaaagataaataatatcatataagatgttgttggattcgtctc 38198613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 380
Target Start/End: Complemental strand, 22127370 - 22127312
Alignment:
Q  322 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctact 380  Q
    ||||| ||||||||||   | ||||||||| |||||||||||||||| |||||||||||    
T  22127370 atgatctatttgacaatgtataatattgacctaacatactttgatcacatttttctact 22127312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 427
Target Start/End: Original strand, 23734190 - 23734299
Alignment:
Q  321 gatgatttatttgacaaaaaacaatattgacttaa-catactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttg 417  Q
    |||||||||||||| || |  || ||||||||||| |||| |||||  ||||||||||||||||  || ||||||||||  ||||| |||||||| ||||    
T  23734190 gatgatttatttgaaaatatgcactattgacttaaacatattttgactatatttttctactaatatacgaagataaataatatcatataagatatcgttg 23734289  T
Q  418 gattcttctc 427  Q
     |||| ||||    
T  23734290 aattcgtctc 23734299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 25274039 - 25273981
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||| ||||||||||||  |||||||||||||||    
T  25274039 caattttgacctaacttactttgaccataattttctactaatatacaaagataaataat 25273981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 26651215 - 26651173
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  26651215 tactttgaccatatttttctactaatatacaaagataaataat 26651173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 380
Target Start/End: Original strand, 40535551 - 40535609
Alignment:
Q  322 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctact 380  Q
    ||||| ||||||||||   | ||||||||| |||||||||||||||| |||||||||||    
T  40535551 atgatctatttgacaatgtataatattgacctaacatactttgatcacatttttctact 40535609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 19327376 - 19327444
Alignment:
Q  361 tttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||||||||||||||||||  ||| |||||||||  ||||| |||||||| ||| ||||| ||||    
T  19327376 tttgatcatatttttctactaataaacatagataaataatatcatataagatatcgttagattcgtctc 19327444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 38850749 - 38850802
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||| ||||||  |||||||||||||||    
T  38850749 ttgacctaacttactttgaccatatttttccactaatatacaaagataaataat 38850802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 40348613 - 40348568
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||    
T  40348613 acatattttgaccatatttttctactaatatacaaagataaataat 40348568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 423
Target Start/End: Complemental strand, 26190367 - 26190304
Alignment:
Q  362 ttgatcatatttttctactaattcacaaagataaataa--tcatgtaagatattgttggattct 423  Q
    |||||| |||||||||||||||  ||||||||||||||  |||| |||||| | ||||||||||    
T  26190367 ttgatcgtatttttctactaatatacaaagataaataatttcatataagatgtcgttggattct 26190304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 40818708 - 40818660
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataatc 401  Q
    |||| |||| ||| |||||||||||||||||  ||||||||||||||||    
T  40818708 taacttactctgaccatatttttctactaatatacaaagataaataatc 40818660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 321 - 427
Target Start/End: Complemental strand, 3529416 - 3529308
Alignment:
Q  321 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 418  Q
    ||||| ||||||||||| | | | ||||||||||||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||| |||||||    
T  3529416 gatgacttatttgacaatatatattattgacttaacatactttgaccatatttttctactaattcataaagataaataatatcatgtaagatgttgttgg 3529317  T
Q  419 attcttctc 427  Q
    |||| ||||    
T  3529316 attcgtctc 3529308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 427
Target Start/End: Original strand, 21034542 - 21034658
Alignment:
Q  313 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||| ||| || |||||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||||| |||    
T  21034542 cctcaatagataatctatttgacaatatacattattgacttaacatactttgattatatttttctactaaatcacaaagataaataatatcatgtaggat 21034641  T
Q  411 attgttggattcttctc 427  Q
     ||||||||||| ||||    
T  21034642 gttgttggattcctctc 21034658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 16265263 - 16265173
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  16265263 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 16265173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 16266392 - 16266302
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  16266392 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 16266302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 31971402 - 31971516
Alignment:
Q  315 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatat 412  Q
    ||||||||| ||||||||||||| | | | |||| | |||||||| |||||||||||||||||||||||| |||||||||||||  ||||| |||||| |    
T  31971402 tcaatggataatttatttgacaatatatattattaatttaacatattttgatcatatttttctactaattaacaaagataaataatatcatataagatgt 31971501  T
Q  413 tgttggattcttctc 427  Q
    |||||||||| ||||    
T  31971502 tgttggattcgtctc 31971516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 299 - 427
Target Start/End: Complemental strand, 37281353 - 37281224
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||  ||| ||| |||||| || ||||||| | | | ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  37281353 tactccctccgtc-ccttaatagatgatctagttgacaatatatattattgacttgacatactttgaccatacttttctactaattcacaaagataaata 37281255  T
Q  399 --atcatgtaagatattgttggattcttctc 427  Q
      |||||||||||| ||||||||||| ||||    
T  37281254 atatcatgtaagatgttgttggattcgtctc 37281224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 422
Target Start/End: Complemental strand, 4605260 - 4605136
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||  ||| ||| |||||  |||||||||| | ||| ||||||||| ||||||||||  |||||||| ||| |||||||||||||||||||    
T  4605260 tactccctccgtc-ccttaatagatgacctatttgacaatatacattattgactttacatactttggccatattttcctattaattcacaaagataaata 4605162  T
Q  399 --atcatgtaagatattgttggattc 422  Q
      ||||||||||||||||||||||||    
T  4605161 atatcatgtaagatattgttggattc 4605136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 29162073 - 29161980
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||| | ||| ||||||||| | |||||||||||||| |||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  29162073 ttgacaatatacattattgacttgagatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattc 29161980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 419
Target Start/End: Complemental strand, 24982567 - 24982491
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  24982567 tattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 24982491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 422
Target Start/End: Original strand, 23569719 - 23569798
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  23569719 tattgacttgacgtactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattc 23569798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 419
Target Start/End: Original strand, 3898602 - 3898692
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  3898602 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatattatgtaagatgttgttgga 3898692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 25532008 - 25531910
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  25532008 ttgacaatatacattattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 25531910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 400
Target Start/End: Complemental strand, 26441864 - 26441795
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  26441864 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataat 26441795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 42708716 - 42708632
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  42708716 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 42708632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 400
Target Start/End: Complemental strand, 43680300 - 43680231
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  43680300 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataat 43680231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 400
Target Start/End: Complemental strand, 47222465 - 47222376
Alignment:
Q  311 ttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||  ||||  ||||||| || | ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  47222465 ttcctcaataaatgacctatttgataatatacattattgacttaacatactttgaccatatttttttactaattcacaaagataaataat 47222376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 50481509 - 50481413
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttggattc 422  Q
    |||||||||| | ||| ||||||| |||||||||||||  || ||||||||||||||||||||| ||||||||  |||||||||| |||||||||||    
T  50481509 tatttgacaatatacattattgacctaacatactttgacaatttttttctactaattcacaaaggtaaataataccatgtaagatgttgttggattc 50481413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 50876580 - 50876496
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  50876580 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 50876496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 427
Target Start/End: Complemental strand, 50539475 - 50539392
Alignment:
Q  346 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  50539475 attgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 50539392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 30529081 - 30529179
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| | ||| ||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  30529081 ttgacaatatacattattgacttgagataatttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 30529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 38458960 - 38458862
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||| | ||||||||||| ||||    
T  38458960 ttgacaatatacattattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaaggtgttgttggattcgtctc 38458862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 400
Target Start/End: Original strand, 38737877 - 38737932
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38737877 tattgatttaacatactttaatcatatttttctactaattcacaaagataaataat 38737932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 1849931 - 1849832
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata---atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| || | ||||||||||||||||||| |||||||   |||||||||||| ||||||||||| ||||    
T  1849931 ttgacaatatacattattgacttgacatactttgaccacacttttctactaattcacaaaaataaataagtatcatgtaagatgttgttggattcgtctc 1849832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 14075963 - 14075866
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat-catgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||||||||| ||| | |||||||||||||||||||||||| |||||||||  ||||||||| |||||| |||| ||||    
T  14075963 ttgacaatatacattattgacttaacatattttaaccatatttttctactaattcacaaatataaataatatatgtaagatgttgttgaattcgtctc 14075866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 400
Target Start/End: Original strand, 16751484 - 16751553
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| | ||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  16751484 ttgacaatatacattattgacttaacatattttgaccatatttttttactaattcacaaagataaataat 16751553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 39354309 - 39354393
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||| ||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  39354309 tattgacttgatatattttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 39354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 52379205 - 52379121
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||||| ||||    
T  52379205 tattgacttgatatactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtctc 52379121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 32988380 - 32988478
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||| ||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  32988380 ttgacaatatacattattgacttgacatattttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 32988478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 427
Target Start/End: Original strand, 49805299 - 49805381
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| ||||||||||| || |||||  ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  49805299 ttgacttgacatactttgaccacattttaatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 49805381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 27581116 - 27581039
Alignment:
Q  321 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||||||| |   ||| ||||| |||||||||||||||||||||||||| ||||  |||||||||||||    
T  27581116 gatgatttatttgacaatatgtaattttgacctaacatactttgatcatatttttctaataatatacaaagataaata 27581039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 27990760 - 27990844
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| ||||||||||||| |||||||||||||||||  ||||| |||||||  |||||||||||| |||||| |||| ||||    
T  27990760 tattgacctaacatactttgaccatatttttctactaatatacaaaaataaataacatcatgtaagatgttgttgaattcgtctc 27990844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 357 - 422
Target Start/End: Original strand, 48264868 - 48264935
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||||| |||| ||||||||||||||| |||||||||||  |||||||||||| |||||||||||    
T  48264868 atactttgaccatacttttctactaattcagaaagataaataatatcatgtaagatgttgttggattc 48264935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 421
Target Start/End: Original strand, 48219687 - 48219765
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggatt 421  Q
    ||||||||| | |||| |||| |||| ||||||| |||||||||||||||||||  |||||||||||| ||||||||||    
T  48219687 tattgacttgatatacgttgaccatacttttctagtaattcacaaagataaataatatcatgtaagatgttgttggatt 48219765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 48376378 - 48376285
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    |||||||||| | ||| ||||||||||| ||||||||| ||| |||||   |||||||||||||||| |||  |||||||||||| |||||||||||    
T  48376378 tatttgacaatatacattattgacttaagatactttgaacatgttttt---ctaattcacaaagatagataatatcatgtaagatgttgttggattc 48376285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 422
Target Start/End: Original strand, 38737378 - 38737502
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataa--a 396  Q
    ||||||||||||  || |||| |||||| ||||||||||   | |||||||||||||||| |||||||  |||||||||||||||  | ||||||||  |    
T  38737378 tactccctccgtc-ccacaatagatgatctatttgacaatgtataatattgacttaacattctttgattgtatttttctactaatatataaagataaaca 38737476  T
Q  397 taatcatgtaagatattgttggattc 422  Q
    | |||||||||||| ||||| |||||    
T  38737477 ttatcatgtaagatgttgtttgattc 38737502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 41501652 - 41501736
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||| || ||||||||||||||||  || ||||||||||||| | |||||||  |||||||||||| ||||||||||| ||||    
T  41501652 tattgaattgacatactttgatcatacattcctactaattcacacaaataaataatatcatgtaagatgttgttggattcgtctc 41501736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 23330673 - 23330590
Alignment:
Q  341 acaatattgacttaacat-actttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttggatt 421  Q
    |||||||||||||||||| |||||||  || ||||| | |||||||||||| |||||||||  |||||||||| ||||||||||    
T  23330673 acaatattgacttaacattactttgacaatgtttttatgctaattcacaaacataaataatatcatgtaagatgttgttggatt 23330590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 2139044 - 2138997
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  2139044 taacttactttgatcatatttttctactaatatacaaagataaataat 2138997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 400
Target Start/End: Original strand, 26543909 - 26543968
Alignment:
Q  341 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  26543909 acaattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 26543968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 10100539 - 10100481
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  10100539 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 10100481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 10124151 - 10124209
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  10124151 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 10124209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 36035744 - 36035786
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  36035744 tactttgatcatatttttctactaatatacaaagataaataat 36035786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 49903695 - 49903653
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  49903695 tactttgatcatatttttctactaatatacaaagataaataat 49903653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 422
Target Start/End: Complemental strand, 38786961 - 38786890
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    |||| ||||||||||||||||||| ||||||  |||||||||||||  ||||| |||||| ||||| |||||    
T  38786961 taacttactttgatcatatttttcaactaatatacaaagataaataatatcatataagatgttgttagattc 38786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 6017464 - 6017417
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  6017464 taacttactttgaccatatttttctactaatatacaaagataaataat 6017417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 7075345 - 7075298
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  7075345 taacttactttgaccatatttttctactaatatacaaagataaataat 7075298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 45299360 - 45299418
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| ||||||||| |||||||  |||||||||||||||    
T  45299360 caattttgacctaacttactttgaccatatttttatactaatatacaaagataaataat 45299418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 48312070 - 48312128
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||| |||||| || ||||||| |||||||||||||||  |||||||||||||||    
T  48312070 caattttggcttaacttattttgatcgtatttttctactaatatacaaagataaataat 48312128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 3555259 - 3555304
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||||  ||||||||||||||||  |||||||||||||||    
T  3555259 acatactttgaatatatttttctactaatatacaaagataaataat 3555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 23337854 - 23337907
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  23337854 ttgacctaacttagtttgaccatatttttctactaatatacaaagataaataat 23337907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 30005820 - 30005775
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||| |||||||||||||||||||  ||||| |||||||||    
T  30005820 acatactttaatcatatttttctactaatatacaaaaataaataat 30005775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 31698638 - 31698683
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||||||||| || ||||  |||||||||||||||    
T  31698638 acatactttgatcatatttttttattaatatacaaagataaataat 31698683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 32565938 - 32565878
Alignment:
Q  369 tatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| || |||||||||||||||||||  |||||||||||| || |||||||| ||||    
T  32565938 tatttttttagtaattcacaaagataaataatatcatgtaagatgtttttggattcgtctc 32565878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 412
Target Start/End: Original strand, 40883458 - 40883525
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatat 412  Q
    ||||| |||| ||||||||||||||||||| ||||||  ||||| |||||||  ||||| ||||||||    
T  40883458 ttgacctaacttactttgatcatatttttcaactaatatacaaatataaatagtatcatataagatat 40883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 427
Target Start/End: Original strand, 45234904 - 45234974
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaataatcatgtaagatattgttggattcttctc 427  Q
    |||||||||||||||| |||| || ||||| |||||||||| |||| || |||||| ||||||||||| ||||    
T  45234904 acatactttgatcatacttttttattaatttacaaagataagtaat-at-taagatgttgttggattcgtctc 45234974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 5e-26; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 314 - 427
Target Start/End: Original strand, 13206967 - 13207082
Alignment:
Q  314 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagata 411  Q
    |||||| |||||  |||||||||| | ||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||  ||||||||||||     
T  13206967 ctcaatagatgacctatttgacaatatactttattgacttaacattctttgaccatatttttctactaattcacaaagataaataatatcatgtaagatg 13207066  T
Q  412 ttgttggattcttctc 427  Q
    ||||||||||| ||||    
T  13207067 ttgttggattcgtctc 13207082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 8796279 - 8796181
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  8796279 ttgacaatatacattattgacttaacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatattgttggattcgtctc 8796181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 420
Target Start/End: Original strand, 16696016 - 16696138
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||  ||||||| |||||  || ||||||| | |||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  16696016 tactccctccgtc-cctcaatagatgacctagttgacaatatacatcattgacttgacatactttgaccatatttttctactaattcacaaagataaata 16696114  T
Q  399 --atcatgtaagatattgttggat 420  Q
      |||||||||||| |||||||||    
T  16696115 atatcatgtaagatgttgttggat 16696138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 19068784 - 19068894
Alignment:
Q  313 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||| |||||| ||||||||||||  || |||||| |||||||||||||| |||||||||||||||||||||||||| || ||  ||||||||||||    
T  19068784 cctcaatagatgatctatttgacaaaatgcattattgatttaacatactttgaccatatttttctactaattcacaaagagaagtaatatcatgtaagat 19068883  T
Q  411 attgttggatt 421  Q
     ||||| ||||    
T  19068884 gttgttagatt 19068894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 25163394 - 25163304
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  25163394 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatataagatattgttgga 25163304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 18992133 - 18992035
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  18992133 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctc 18992035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 30237397 - 30237299
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |  || |||||||||||| |||||||| ||||    
T  30237397 ttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagataaacaatataatgtaagatattattggattcgtctc 30237299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 20662104 - 20662188
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  20662104 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 20662188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 29986215 - 29986287
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  29986215 atactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 29986287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 25435641 - 25435543
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| |||||| || ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  25435641 ttgacaatatacattattgatttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 25435543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 7097918 - 7098002
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||  |||||||||||| | ||||||||| ||||    
T  7097918 tattgacttaacatactttgaccatacttttatactaattcataaagataaataatatcatgtaagatgtagttggattcgtctc 7098002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 24150957 - 24150873
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| ||||||| |||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  24150957 tattgacttgatatactttgaccatacttttctattaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 24150873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 33121758 - 33121674
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| |  |||||||| |||||||||||||||||||| |||||||||||  |||||||||||| ||||||||||| ||||    
T  33121758 tattgacttgatgtactttgaccatatttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtctc 33121674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 427
Target Start/End: Original strand, 643477 - 643560
Alignment:
Q  346 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||| ||||||||||| |||| |||| |||||| |||||||||||||||  |||||||||||| ||||||||||| ||||    
T  643477 attgacttgacatactttgaccatacttttatactaagtcacaaagataaataatatcatgtaagatgttgttggattcgtctc 643560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 11114795 - 11114697
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| |||||| || ||||| ||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  11114795 ttgacaatatacattattgatttgacatattttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 11114697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 22020506 - 22020408
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||| | || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  22020506 ttgacaatatacattattgacttgacatactttaaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 22020408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 31855034 - 31854950
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| ||||||||||| || | |||| || |||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  31855034 tattgacttgacatactttgaccacacttttatattaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 31854950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 400
Target Start/End: Original strand, 2141609 - 2141668
Alignment:
Q  341 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  2141609 acaattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 2141668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 6142533 - 6142475
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  6142533 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 6142475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 29515052 - 29514994
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  29515052 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 29514994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 427
Target Start/End: Original strand, 19788633 - 19788707
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | |||||||||||||||||  ||||| |||||||  |||||||||||| ||||||||||| ||||    
T  19788633 acatactttaaccatatttttctactaatatacaaatataaataatatcatgtaagatgttgttggattcgtctc 19788707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 9022882 - 9022940
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| ||||||||||||| |||||||||||||||||  ||||| |||||||||    
T  9022882 caattttgacctaacatactttgaccatatttttctactaatatacaaaaataaataat 9022940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 17496344 - 17496286
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  17496344 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 17496286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 24798572 - 24798514
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  24798572 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 24798514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 24825207 - 24825265
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  24825207 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 24825265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 12869435 - 12869382
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| ||||| ||||| |||||||||||||||||  |||||||||||||||    
T  12869435 ttgacttgacatagtttgaccatatttttctactaatatacaaagataaataat 12869382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 30699308 - 30699361
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  30699308 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 30699361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 422
Target Start/End: Original strand, 31708935 - 31709017
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    |||| |||||||||  |||||||| | |||||||||||||||  |||||||||||||  ||||| |||||||| ||| |||||    
T  31708935 caattttgacttaatttactttgaccgtatttttctactaatatacaaagataaataatatcatataagatatcgttagattc 31709017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 2397828 - 2397870
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  2397828 tactttgaccatatttttctactaatatacaaagataaataat 2397870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 2656696 - 2656638
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| ||||||||  ||||||||||||||||  |||||||||||||||    
T  2656696 caattttgacctaacttactttgactatatttttctactaatatacaaagataaataat 2656638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 2667351 - 2667293
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| ||||||||  ||||||||||||||||  |||||||||||||||    
T  2667351 caattttgacctaacttactttgactatatttttctactaataaacaaagataaataat 2667293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 383
Target Start/End: Complemental strand, 3686992 - 3686954
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaat 383  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  3686992 tattgacctaacatactttgatcatatttttctattaat 3686954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 4890136 - 4890094
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  4890136 tactttgaccatatttttctactaatatacaaagataaataat 4890094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 16969420 - 16969478
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||||  |||||||| |||||||||||||||||  ||||| |||||||||    
T  16969420 caattttgacttaatttactttgaccatatttttctactaatatacaaatataaataat 16969478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 400
Target Start/End: Complemental strand, 17417728 - 17417682
Alignment:
Q  354 aacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||| ||| |||||||||||||||||||  |||||||||||||||    
T  17417728 aacataatttaatcatatttttctactaatatacaaagataaataat 17417682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 32541487 - 32541445
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  32541487 tactttgaccatatttttctactaatatacaaagataaataat 32541445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 16434598 - 16434643
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||| |||||||||| ||||||  |||||||||||||||    
T  16434598 acatactttgaccatatttttccactaatatacaaagataaataat 16434643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 24693199 - 24693267
Alignment:
Q  361 tttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||| |||||||||||||||||  |||||||||||||  ||||| |||||| || |||||||| ||||    
T  24693199 tttgaccatatttttctactaatatacaaagataaataatatcatataagatgtttttggattcatctc 24693267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 401
Target Start/End: Original strand, 6612220 - 6612276
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataatc 401  Q
    |||||| |||||||||||||||||| ||||| ||||||   |||| |||||||||||    
T  6612220 tattgaattaacatactttgatcatttttttttactaaaatacaatgataaataatc 6612276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 383
Target Start/End: Original strand, 34500928 - 34500956
Alignment:
Q  355 acatactttgatcatatttttctactaat 383  Q
    |||||||||||||||||||||||||||||    
T  34500928 acatactttgatcatatttttctactaat 34500956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 314 - 427
Target Start/End: Original strand, 51736968 - 51737083
Alignment:
Q  314 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagata 411  Q
    |||||| |||||| |||||||||| | ||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||  ||||||||||||     
T  51736968 ctcaatagatgatctatttgacaatatacattattgacttaatatattttgaccatatttttctactaattcacaaagataaataatatcatgtaagatg 51737067  T
Q  412 ttgttggattcttctc 427  Q
    |||||| |||| ||||    
T  51737068 ttgttgaattcgtctc 51737083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 18360004 - 18360102
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  18360004 ttgacaatatacattattgacttgacatactttgattatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 18360102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 36602924 - 36602826
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  36602924 ttgacaatatacattattgacttgacatactttgattatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 36602826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 422
Target Start/End: Complemental strand, 50033266 - 50033157
Alignment:
Q  315 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatat 412  Q
    ||||| |||||  |||||||| | | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |    
T  50033266 tcaatagatgacctatttgacgatatacattattgacttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgt 50033167  T
Q  413 tgttggattc 422  Q
    |||| |||||    
T  50033166 tgttagattc 50033157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 428
Target Start/End: Original strand, 23603646 - 23603777
Alignment:
Q  298 ctactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaat 397  Q
    |||||||||||||| ||||||| |||||  || ||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||    
T  23603646 ctactccctccgtt-cctcaatagatgacctagttgacaatatacattattgacttgacatactttgaacatatttttctactaattcaaaaagaaaaat 23603744  T
Q  398 a--atcatgtaagatattgttggattcttctca 428  Q
    |  |||||||||| | ||||||||||| |||||    
T  23603745 aatatcatgtaagttgttgttggattcgtctca 23603777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 346 - 419
Target Start/End: Original strand, 19525760 - 19525835
Alignment:
Q  346 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  19525760 attgacttaacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 19525835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 25644589 - 25644499
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  25644589 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 25644499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 299 - 417
Target Start/End: Original strand, 6922940 - 6923059
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||| |||||||  ||||  || |||| || | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  6922940 tactccctccgtt-cctcaataaatgacctagttgataatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaata 6923038  T
Q  399 --atcatgtaagatattgttg 417  Q
      |||||||||||| ||||||    
T  6923039 atatcatgtaagatgttgttg 6923059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 19170584 - 19170668
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  19170584 tattgacttgacgtactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 19170668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 28152207 - 28152123
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  28152207 tattgacttgatatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 28152123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 28166490 - 28166406
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  28166490 tattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 28166406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 46803848 - 46803764
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  46803848 tattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 46803764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 4264373 - 4264266
Alignment:
Q  322 atgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    |||| ||| ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  4264373 atgacttagttgacaatatacattattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttgga 4264274  T
Q  420 ttcttctc 427  Q
    ||| ||||    
T  4264273 ttcgtctc 4264266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 6494820 - 6494720
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat----catgtaagatattgttggattcttct 426  Q
    ||||||| | ||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||    |||||||||| ||||||||||| |||    
T  6494820 ttgacaatatacattattgacttaacatactttgaccatacttttatactaattcacaaagataaataatactacatgtaagatgttgttggattcgtct 6494721  T
Q  427 c 427  Q
    |    
T  6494720 c 6494720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 7738850 - 7738948
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  7738850 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctc 7738948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 39260163 - 39260261
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||||| || |||||||||||||||||||||||||||  |||||||||||| |||||| |||| ||||    
T  39260163 ttgacaatatacattattgacttgacatactttgatcctacttttctactaattcacaaagataaataatatcatgtaagatgttgttgaattcgtctc 39260261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 345 - 428
Target Start/End: Original strand, 20678633 - 20678718
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctca 428  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||    
T  20678633 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctca 20678718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 39194145 - 39194044
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataa--ataatcatgtaagatattgttggattcttc 425  Q
    |||||||||| | |||||||||||||||||||||||||   ||||||||||||||| |||||||||||  || || ||||||||| ||||||||||| ||    
T  39194145 tatttgacaatatacaatattgacttaacatactttgactgtatttttctactaatacacaaagataaacattataatgtaagatgttgttggattcgtc 39194046  T
Q  426 tc 427  Q
    ||    
T  39194045 tc 39194044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 410
Target Start/End: Complemental strand, 50035782 - 50035685
Alignment:
Q  315 tcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||| |||||  |||||||||| | ||| | ||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||||||||||    
T  50035782 tcaatagatgacctatttgacaatatacattgttgacttaacatactttcaccatatttttctactaattcacaaagataaataatatcatgtaagat 50035685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 3442389 - 3442473
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  3442389 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 3442473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 3901184 - 3901268
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  3901184 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 3901268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 26205749 - 26205833
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  26205749 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 26205833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 345 - 422
Target Start/End: Original strand, 47278322 - 47278401
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||  || |||||||||| ||||||||||    
T  47278322 tattgacttaatatactttgatcatatttttctagcaattcacaaagataaataatattatgtaagataatgttggattc 47278401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 3443418 - 3443516
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||| ||  |||||||||||| ||||||||||| ||||    
T  3443418 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataagtaatatcatgtaagatgttgttggattcgtctc 3443516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 45198371 - 45198469
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||  ||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  45198371 ttgacaatatacattattgacttaatatactttgaacataaatttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 45198469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 46212381 - 46212479
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| |||||||||| |||||||||||  |||||||||||| ||||||||||| ||||    
T  46212381 ttgacaatatacattattgacttgacatactttgaccatacttttatactaattcataaagataaataatatcatgtaagatgttgttggattcgtctc 46212479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 4209589 - 4209508
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||| | ||| |||||| || ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||    
T  4209589 ttgacaatatacattattgatttgacatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagat 4209508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 19631542 - 19631445
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatattttt-ctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||| || | ||| ||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||  |||||||||||| |||||||||||    
T  19631542 tatttgataatatacattatagacttaacatactttgaccatattttttctgctaattcacaaagataaataatatcatgtaagatgttgttggattc 19631445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 5735487 - 5735403
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||||| ||||    
T  5735487 tattgacttgatatactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtctc 5735403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 19633894 - 19633978
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| || |||||||| |||||||||||||||||||| ||||| |||||  |||||||||||| ||||||||||| ||||    
T  19633894 tattgacttgacctactttgaccatatttttctactaattcaaaaagaaaaataatatcatgtaagatgttgttggattcgtctc 19633978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 427
Target Start/End: Original strand, 19652277 - 19652385
Alignment:
Q  321 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 418  Q
    |||||| || ||||||| | ||| ||||||||| |||||||||||  ||||||||||||||||||| ||||| |||||  |||||||||||| ||||||     
T  19652277 gatgatctagttgacaatatacattattgacttgacatactttgactatatttttctactaattcaaaaagaaaaataatatcatgtaagatgttgttga 19652376  T
Q  419 attcttctc 427  Q
    |||| ||||    
T  19652377 attcgtctc 19652385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 37688090 - 37688162
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  37688090 atactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 37688162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 47579502 - 47579418
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  47579502 tattgacttgatatactttgaccatacttttttactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 47579418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 49768661 - 49768577
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  49768661 tattgacttgatatactttgaccatacttttttactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 49768577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 400
Target Start/End: Original strand, 55190597 - 55190666
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  55190597 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataat 55190666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 420
Target Start/End: Original strand, 5123188 - 5123279
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttggat 420  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||   ||||||||| |||||||||    
T  5123188 ttgacaatatacattattgacttgacatactttgaccatacttttttactaattcacaaagataaataataagatgtaagatgttgttggat 5123279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 1377261 - 1377164
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| |||||||||||||| |||||||  |||||||||||| ||||||||||| ||||    
T  1377261 ttgacaatatacattattgacttgacatactttga-catacttttatactaattcacaaatataaataatatcatgtaagatgttgttggattcgtctc 1377164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 427
Target Start/End: Original strand, 5744130 - 5744212
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| ||||||||||| || | |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  5744130 ttgacttgacatactttgaccacacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 5744212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 427
Target Start/End: Complemental strand, 23256175 - 23256067
Alignment:
Q  321 gatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgg 418  Q
    |||||| || ||||||| | ||| |||||| || |||||||| || |||| ||||||||||||||||||| |||||||  || ||||||||| |||||||    
T  23256175 gatgatctagttgacaatatacattattgatttgacatacttggaccatacttttctactaattcacaaaaataaataatataatgtaagatgttgttgg 23256076  T
Q  419 attcttctc 427  Q
    |||| ||||    
T  23256075 attcgtctc 23256067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 53568560 - 53568512
Alignment:
Q  352 ttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  53568560 ttaacatattttgaccatatttttctactaattcacaaagataaataat 53568512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 3708295 - 3708353
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  3708295 caattttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 3708353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 372 - 427
Target Start/End: Complemental strand, 50971648 - 50971591
Alignment:
Q  372 ttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  50971648 ttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 50971591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 421
Target Start/End: Complemental strand, 10181203 - 10181126
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata-atcatgtaagatattgttggatt 421  Q
    ||||||||||||||| ||||| || ||||||||||||||  ||||||||||||| ||| | |||||| ||||||||||    
T  10181203 tattgacttaacatattttgaccacatttttctactaatatacaaagataaatatatcgtataagatgttgttggatt 10181126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 21858964 - 21859048
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||| |||||  ||  |||||||||||| ||||||||||| ||||    
T  21858964 tattgacttgatatactttgaccatacttttctactaattcacatagatacttaatatcatgtaagatgttgttggattcgtctc 21859048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 21914827 - 21914911
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||| |||||  ||  |||||||||||| ||||||||||| ||||    
T  21914827 tattgacttgatatactttgaccatacttttctactaattcacatagatacttaatatcatgtaagatgttgttggattcgtctc 21914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 39786402 - 39786486
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||| || ||||||||||| |||| |||| ||||||||||||||| | ||||  |||||||||||| ||||||||||| ||||    
T  39786402 tattgatttgacatactttgaccatacttttatactaattcacaaagtttaataatatcatgtaagatgttgttggattcgtctc 39786486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 55997327 - 55997260
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||||||| ||  ||||| |||||||||||||||||||||||| |||||||  ||||||||||||    
T  55997327 tattgacttaatattttttgaccatatttttctactaattcacaaaaataaataatatcatgtaagat 55997260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 18881375 - 18881320
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||| |||||||||  ||||||||||||||||  |||||||||||||||    
T  18881375 tattgacttaatatactttgactatatttttctactaatatacaaagataaataat 18881320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 400
Target Start/End: Original strand, 19731211 - 19731266
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||||||||| ||||| ||| | |||||||| |||||||||||||    
T  19731211 tattgacttaacatactttgaccatatatttatgctaattcagaaagataaataat 19731266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 427
Target Start/End: Original strand, 39195545 - 39195619
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||||| ||||||||| |||||||  |||||||||||||  ||||| |||||| ||||||||||| ||||    
T  39195545 acatactttgaccatatttttatactaatatacaaagataaataatatcatataagatgttgttggattcgtctc 39195619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 8525437 - 8525379
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| ||||||||||||||||||||||||||  |||| ||||||||||    
T  8525437 caattttgacctaacttactttgatcatatttttctactaatatacaaggataaataat 8525379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 31152703 - 31152761
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  31152703 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 31152761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 43447207 - 43447265
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  43447207 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 43447265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 53987801 - 53987743
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| || |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  53987801 caatattaacctaacttactttgaccatatttttctactaatatacaaagataaataat 53987743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 47834160 - 47834107
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  47834160 ttgacataacttactttgaccatatttttctactaatatacaaagataaataat 47834107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 48380520 - 48380573
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  48380520 ttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 48380573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 422
Target Start/End: Complemental strand, 14958203 - 14958136
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||||| |||||||||||||||||  ||||| |||||||  ||||| |||||| |||||||||||    
T  14958203 atactttgaccatatttttctactaatatacaaaaataaataatatcatataagatgttgttggattc 14958136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 400
Target Start/End: Original strand, 27976598 - 27976670
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||| | ||||||||||  ||| ||| ||||||||||||||| || ||||  |||||||||||||||    
T  27976598 tatttgacaagatacaatattgatctaatatattttgatcatatttttttattaatatacaaagataaataat 27976670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 400
Target Start/End: Original strand, 28914409 - 28914468
Alignment:
Q  341 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| ||||| |||| |||||||| |||||||||||||||||  | |||||||||||||    
T  28914409 acaattttgacctaacttactttgaccatatttttctactaatatataaagataaataat 28914468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 401
Target Start/End: Original strand, 33394119 - 33394178
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataatc 401  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  || |||||||||||||    
T  33394119 caattttgacctaacttactttgaccatatttttctactaatatacgaagataaataatc 33394178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 400
Target Start/End: Original strand, 37164057 - 37164116
Alignment:
Q  341 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| ||||| |||| ||||||||  ||||||||||||||||  |||||||||||||||    
T  37164057 acaattttgacctaacttactttgactatatttttctactaatatacaaagataaataat 37164116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Original strand, 43047440 - 43047487
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  43047440 taacttactttgaccatatttttctactaatatacaaagataaataat 43047487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 48336697 - 48336642
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||| ||||| | |||||||||||||||  ||||||||| |||||    
T  48336697 tattgacttaacatattttgaccgtatttttctactaatatacaaagatagataat 48336642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Original strand, 50684973 - 50685020
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||||||||||||||||||||||||  | |||||||||||||    
T  50684973 taacttactttgatcatatttttctactaatatataaagataaataat 50685020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 55014475 - 55014420
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||||||||||||| | ||| ||  |||||| |||||||||||||    
T  55014475 tattgacttaacatactttgatcatttatttttaaaaattcataaagataaataat 55014420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 1613223 - 1613181
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  1613223 tactttgaccatatttttctactaatatacaaagataaataat 1613181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 10384890 - 10384948
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||| | |||||||||||||||||  |||||||||||||||    
T  10384890 caattttgacctaacttactttaaccatatttttctactaatatacaaagataaataat 10384948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 28909861 - 28909803
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||||  |||||||| ||||||||||||||||   |||||||||||||||    
T  28909861 caattttgacttaaattactttgaccatatttttctactaaaatacaaagataaataat 28909803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 39171000 - 39171058
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  39171000 caattttgacctaacttattttgaccatatttttctactaatatacaaagataaataat 39171058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 23605924 - 23605836
Alignment:
Q  341 acaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||| ||||| || | |||||||||||||||||||||||||   ||| |||||||||  ||||| |||||||| ||| ||||| ||||    
T  23605924 acaattttgacctagcttactttgatcatatttttctactaacatacatagataaataatatcatataagatatcgttagattcgtctc 23605836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 46608260 - 46608313
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| ||||||||| |||||||  |||||||||||||||    
T  46608260 ttgacctaacttactttgaccatatttttatactaatatacaaagataaataat 46608313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 26660614 - 26660559
Alignment:
Q  357 atactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||||| |||||||||||| ||||||| |||| ||||||  ||||||||||||    
T  26660614 atactttgaccatatttttctattaattcataaaggtaaataatatcatgtaagat 26660559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 427
Target Start/End: Complemental strand, 28988399 - 28988328
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||| |||||||||||||||||  ||| |||||||||  ||||| |||||| ||||| ||||| ||||    
T  28988399 tactttgaccatatttttctactaatgtacatagataaataatatcatataagatgttgttagattcgtctc 28988328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 427
Target Start/End: Original strand, 37843575 - 37843704
Alignment:
Q  299 tactccctccgtttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata 398  Q
    ||||||||||||  ||||||| |||||  || ||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  37843575 tactccctccgtc-cctcaatagatgacctacttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagaaaaata 37843673  T
Q  399 --atcatgtaagatattgttggattcttctc 427  Q
      |||||||||||| ||||||||||| ||||    
T  37843674 atatcatgtaagatgttgttggattcgtctc 37843704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 41411185 - 41411286
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttc 425  Q
    |||||||||| | | | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||    
T  41411185 tatttgacaatatatattattgacttaacgtactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtc 41411284  T
Q  426 tc 427  Q
    ||    
T  41411285 tc 41411286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 427
Target Start/End: Complemental strand, 2864202 - 2864086
Alignment:
Q  313 cctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagat 410  Q
    ||||||| |||||  ||||||| || | ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||| ||||||    
T  2864202 cctcaatagatgacatatttgataatatacattattgacttaacatactttcaccatatttttctactaattcacaaagataaataatatcatataagat 2864103  T
Q  411 attgttggattcttctc 427  Q
     ||||||||||| ||||    
T  2864102 gttgttggattcgtctc 2864086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 16048315 - 16048225
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  16048315 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 16048225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 419
Target Start/End: Original strand, 22613740 - 22613830
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  22613740 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 22613830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 37516375 - 37516277
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  37516375 ttgacaatatacattattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 37516277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 39036640 - 39036542
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  39036640 ttgacaatatacattattgacttgtcatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 39036542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 39405994 - 39405904
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  39405994 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgga 39405904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 1830888 - 1830787
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttc 425  Q
    |||||||||| | | | |||||||||||| |||||||| |||||||||||||||||||| |||||||||||  |||||||||||| ||||||||||| ||    
T  1830888 tatttgacaatatatattattgacttaacgtactttgaccatatttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtc 1830789  T
Q  426 tc 427  Q
    ||    
T  1830788 tc 1830787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 19868731 - 19868815
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||| || |||||||| ||||    
T  19868731 tattgacttaacatactttgaagatatttttctactaattcacaaagataaataatatcatgtaagatgttattggattcgtctc 19868815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 43517105 - 43517189
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| || |||||||| ||||    
T  43517105 tattgacttgacatactttgatcatacttttctactaattcacaaagataaataatatcatgtaagatgttattggattcgtctc 43517189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 419
Target Start/End: Original strand, 4299864 - 4299954
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  4299864 ttgacaatatacattattgacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatataagatgttgttgga 4299954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 5212953 - 5213051
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  5212953 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctc 5213051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 419
Target Start/End: Original strand, 14475261 - 14475351
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||  |||||||||||| ||||||||    
T  14475261 ttgacaatatacattattgacttgacatactttgaccatatttttctactaattcacaaagaaaaataatatcatgtaagatgttgttgga 14475351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 417
Target Start/End: Complemental strand, 25563716 - 25563642
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaat--aatcatgtaagatattgttg 417  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||    
T  25563716 tattgatttaacatactttgatcatatttttctactaattcacaaagataaattatatcatgtaagatgttgttg 25563642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 35290516 - 35290418
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||| ||||    
T  35290516 ttgacaatatacattattgacttgtcatactttgaccatatttttctactaattcacaaagataaataatattatgtaagatgttgttggattcgtctc 35290418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 39895011 - 39894913
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  ||||| |||||| ||||||||||| ||||    
T  39895011 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatataagatgttgttggattcgtctc 39894913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 314 - 421
Target Start/End: Original strand, 30779760 - 30779869
Alignment:
Q  314 ctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagata 411  Q
    |||||| ||||| ||| ||||||| | ||| |||||| |||| | |||||||| ||||||||||||||||| |||||||||||||  ||||||||||||     
T  30779760 ctcaatagatgacttagttgacaatatacattattgatttaatacactttgattatatttttctactaatttacaaagataaataatatcatgtaagatg 30779859  T
Q  412 ttgttggatt 421  Q
    ||||||||||    
T  30779860 ttgttggatt 30779869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 40316355 - 40316254
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttc 425  Q
    |||||||||| | | | |||||||||||| || ||||| |||||||||||||||||||| |||||||||||  |||||||||||| ||||||||||| ||    
T  40316355 tatttgacaatatatattattgacttaacgtaatttgaccatatttttctactaattcataaagataaataatatcatgtaagatgttgttggattcgtc 40316256  T
Q  426 tc 427  Q
    ||    
T  40316255 tc 40316254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 4924883 - 4924967
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  4924883 tattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 4924967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 23988793 - 23988709
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  23988793 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 23988709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 421
Target Start/End: Original strand, 32002045 - 32002137
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggatt 421  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  32002045 ttgacaatatacattattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggatt 32002137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 42148523 - 42148439
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  42148523 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 42148439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 400
Target Start/End: Original strand, 19087644 - 19087716
Alignment:
Q  328 tatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||| | ||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  19087644 tatttgacaatatacattattgatttaatatactttgaccatatttttctactaattcacaaagataaataat 19087716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 970368 - 970278
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttgga 419  Q
    ||||||| | ||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  970368 ttgacaatatacattattaacttaatatactttgaccatatttttctactaattcacaaagataaataatatcatataagatgttgttgga 970278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 40512711 - 40512809
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| |||||| || |||||||||||  ||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  40512711 ttgacaatatacattattgatttgacatactttgactatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 40512809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 427
Target Start/End: Complemental strand, 29627483 - 29627400
Alignment:
Q  346 attgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||| |||||||||||  ||| |||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  29627483 attgacttgacatactttgactatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 29627400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 5364654 - 5364552
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat------catgtaagatattgttggattctt 424  Q
    ||||||| | ||| ||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||||      |||||||||| ||||||||||| |    
T  5364654 ttgacaatatacattattgacttgacatattttgaccatacttttctactaattcacaaagataaataatatcatgcatgtaagatgttgttggattcgt 5364555  T
Q  425 ctc 427  Q
    |||    
T  5364554 ctc 5364552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 35448042 - 35448126
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||| ||||||||||||||||||||||||  ||| |||||| ||||||||||| ||||    
T  35448042 tattgacttgatatactttgaccatacttttttactaattcacaaagataaataataacatctaagatgttgttggattcgtctc 35448126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 38698179 - 38698095
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat--catgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| ||||||||| |||||||| |||||||| ||||||  |||||||||| ||||||||||| ||||    
T  38698179 tattgacttgatatactttgaccatatttttttactaatttacaaagatgaataatatcatgtaagatgttgttggattcgtctc 38698095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 400
Target Start/End: Complemental strand, 43067451 - 43067382
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||| | ||| |||||| |||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  43067451 ttgacaatatacattattgatttaatatactttgaccatatttttctactaatttacaaagataaataat 43067382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 32334669 - 32334767
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| |||||| || ||||||||||| || | |||| |||||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  32334669 ttgacaatatacattattgatttgacatactttgaccacacttttatactaattgacaaagataaataatatcatgtaagatgttgttggattcgtctc 32334767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 33402608 - 33402555
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  33402608 ttgacctaacttactttgatcatatttttctactaatatacaaagataaataat 33402555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 15268602 - 15268554
Alignment:
Q  352 ttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  15268602 ttaacatactttgaccatatttttctacttattcacatagataaataat 15268554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 1098217 - 1098275
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  1098217 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 1098275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 13548255 - 13548313
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  13548255 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 13548313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 14057750 - 14057808
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| ||||||||||||||||||||| ||||  |||||||||||||||    
T  14057750 caattttgacctaacttactttgatcatatttttctattaatatacaaagataaataat 14057808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 20022902 - 20022960
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  20022902 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 20022960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 20040437 - 20040379
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  20040437 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 20040379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 41263151 - 41263093
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  41263151 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 41263093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 427
Target Start/End: Original strand, 5985008 - 5985068
Alignment:
Q  369 tatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    |||||||||||||||  |||||||||||||  ||||| |||||||||||||||||| ||||    
T  5985008 tatttttctactaatatacaaagataaataatatcatataagatattgttggattcgtctc 5985068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 30788252 - 30788305
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  30788252 ttgacataacttactttgaccatatttttctactaatatacaaagataaataat 30788305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 21961445 - 21961359
Alignment:
Q  343 aatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||||| ||||||||||| ||||||| |||||||||  | ||| |||||||  ||||  |||||| ||||||||||| ||||    
T  21961445 aatattgacttgacatactttgaccatatttatctactaatatataaaaataaataatatcaattaagatgttgttggattcgtctc 21961359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 30211752 - 30211705
Alignment:
Q  353 taacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  30211752 taacttactttgaccatatttttctactaatatacaaagataaataat 30211705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 1781151 - 1781109
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  1781151 tactttgaccatatttttctactaatatacaaagataaataat 1781109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 14633049 - 14633107
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| ||||||||||||| |||  |||||||||||||||    
T  14633049 caattttgacctaacttactttgaccatatttttctacaaatatacaaagataaataat 14633107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 15268644 - 15268602
Alignment:
Q  321 gatgatttatttgacaaaaaacaatattgacttaacatacttt 363  Q
    |||||| | ||||||||||||||||||| ||||||||||||||    
T  15268644 gatgatctttttgacaaaaaacaatattcacttaacatacttt 15268602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 19344721 - 19344663
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  19344721 caattttgacctaacttattttgaccatatttttctactaatatacaaagataaataat 19344663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 427
Target Start/End: Complemental strand, 19889842 - 19889785
Alignment:
Q  372 ttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| |||||||||||||||||||  |||||||||||  ||||||||||| ||||    
T  19889842 ttttctaataattcacaaagataaataatatcatgtaagacgttgttggattcgtctc 19889785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 383
Target Start/End: Complemental strand, 25773425 - 25773387
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaat 383  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  25773425 tattgacctaacatactttgaccatatttttctactaat 25773387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 400
Target Start/End: Complemental strand, 27477752 - 27477702
Alignment:
Q  350 acttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||||||||| | ||||||| |||||||  |||||||||||||||    
T  27477752 acttaacatactttgaccgtatttttttactaatatacaaagataaataat 27477702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 27675598 - 27675640
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||||||||||||||  ||| |||||||||||    
T  27675598 tactttgatcatatttttctactaatatacatagataaataat 27675640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 28142986 - 28143028
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||| |||||||||||||||||  |||||||||||||||    
T  28142986 tactttgaccatatttttctactaatatacaaagataaataat 28143028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 25946177 - 25946230
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||||||||||| |||| | |||||||||||||| ||  |||||||||||||||    
T  25946177 ttgacttaacattctttaaccatatttttctactgatatacaaagataaataat 25946230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 35641824 - 35641869
Alignment:
Q  355 acatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||| |||||||||||||||||  | |||||||||||||    
T  35641824 acatactttgaccatatttttctactaatatataaagataaataat 35641869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 12982 - 12884
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  12982 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 12884  T

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Target: scaffold0366 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 10623 - 10525
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  10623 ttgacaatatacattattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 10525  T

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Target: scaffold0366; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 14289 - 14191
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  14289 ttgacaatatacattattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctc 14191  T

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Target: scaffold0092 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 44153 - 44237
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  44153 tattgacttgatatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgttggattcgtctc 44237  T

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Target: scaffold0027 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 117537 - 117453
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||| |||| ||||    
T  117537 tattgacttgatatactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttgaattcgtctc 117453  T

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Target: scaffold0604 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 420
Target Start/End: Complemental strand, 1317 - 1253
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggat 420  Q
    |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  1317 tactttgaccatatttttctactaattcacaaagataaataatatcatgtaagatgttgttggat 1253  T

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Target: scaffold0051 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 422
Target Start/End: Original strand, 41262 - 41341
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    ||||||||| ||||||||| | |||| |||| ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  41262 tattgacttgacatactttaaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgttggattc 41341  T

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Target: scaffold0007 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 15247 - 15345
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattcttctc 427  Q
    ||||||| | ||| ||||||||| ||||||||||| |||| |  |||||||||| |||||||||||||  |||||||||||| ||||||||||| ||||    
T  15247 ttgacaatatacattattgacttgacatactttgaccatactagtctactaatttacaaagataaataatatcatgtaagatgttgttggattcgtctc 15345  T

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Target: scaffold0111 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 400
Target Start/End: Original strand, 38243 - 38332
Alignment:
Q  311 ttcctcaatggatgatttatttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||| |||||  |||||||||| | ||| | |||| |||| ||||||||| |||||||||||||||| |||||||| ||||||||    
T  38243 ttcctcaatagatgacctatttgacaatatacatttttgatttaaaatactttgaccatatttttctactaagtcacaaaggtaaataat 38332  T

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Target: scaffold0221 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 5418 - 5476
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  5418 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 5476  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 184008 - 184066
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| |||||||| |||||||||||||||||  |||||||||||||||    
T  184008 caattttgacctaacttactttgaccatatttttctactaatatacaaagataaataat 184066  T

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Target: scaffold0281 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 422
Target Start/End: Original strand, 13162 - 13228
Alignment:
Q  358 tactttgatcatatttttctactaattcacaaagataaata--atcatgtaagatattgttggattc 422  Q
    |||||||| |||||||||||||||||  ||| |||||||||  ||||| |||||||||||| |||||    
T  13162 tactttgaccatatttttctactaatatacatagataaataatatcatataagatattgttagattc 13228  T

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Target: scaffold0204 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 24219 - 24164
Alignment:
Q  345 tattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||||||||||||| ||||| | |||||||||||||||  ||||||||| |||||    
T  24219 tattgacttaacatattttgaccgtatttttctactaatatacaaagatagataat 24164  T

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Target: scaffold0500 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 697 - 639
Alignment:
Q  342 caatattgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    |||| ||||| |||| || ||||| |||||||||||||||||  |||||||||||||||    
T  697 caattttgacctaacttagtttgaccatatttttctactaatatacaaagataaataat 639  T

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Target: scaffold0340 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 14568 - 14502
Alignment:
Q  331 ttgacaaaaaacaatattgacttaacatactttgatcatatttttctactaattcacaaagataaat 397  Q
    ||||||| | ||| |||||| || | |||||||||  ||||||||||||||||||||||||| ||||    
T  14568 ttgacaatatacattattgatttgatatactttgactatatttttctactaattcacaaagaaaaat 14502  T

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Target: scaffold1248 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 1473 - 1420
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  ||||| |||||||||    
T  1473 ttgacataacttactttgaccatatttttctactaatatacaaaaataaataat 1420  T

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Target: scaffold0952 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 840 - 893
Alignment:
Q  347 ttgacttaacatactttgatcatatttttctactaattcacaaagataaataat 400  Q
    ||||| |||| |||||||| |||||||||||||||||  ||||| |||||||||    
T  840 ttgacataacttactttgaccatatttttctactaatatacaaaaataaataat 893  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 145635 - 145696
Alignment:
Q  366 tcatatttttctactaattcacaaagataaataatcatgtaagatattgttggattcttctc 427  Q
    ||||||||||||||||||  |||||||||||||||    |||||| ||||||||||| ||||    
T  145635 tcatatttttctactaatatacaaagataaataatatcataagatgttgttggattcgtctc 145696  T

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