View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10881_low_19 (Length: 250)
Name: NF10881_low_19
Description: NF10881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10881_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 48452240 - 48451999
Alignment:
| Q |
1 |
acaaacacttagaattctatatgtttagaaatgtacataaaataaaaataatccactgtcctagttaatttcataatttaattttatctagatgttctat |
100 |
Q |
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| T |
48452240 |
acaaacacttagaattctatatgtttagaaatgtacataaaataaaaataatccactgtcctagttaatttcataatttaattttatctagatgttctat |
48452141 |
T |
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| Q |
101 |
aggaacctaaaaagggaggccttttagacccctgttgttatctcatttgtcatcaagatgcatctctccatgttctgttcatggctccatgagtgtggtg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48452140 |
aggaacctaaaaagggaggccttttagacccctgttgttatctcatttgtcatcaagatgcatctctccatgttctgttcatggctccatgagtgtggtg |
48452041 |
T |
|
| Q |
201 |
atggtgaggtgagcaatggccacagttcatcaatcctttgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
48452040 |
atggtgaggtgagcaatggccacagttcatcaatcctttgct |
48451999 |
T |
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