View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10882_high_2 (Length: 271)
Name: NF10882_high_2
Description: NF10882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10882_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 12453576 - 12453845
Alignment:
| Q |
1 |
aaatgagtgtacttagttgccacttggcaatgaagatgattacgttccaatccaacatagctttgatggccagcatccaagtagagttgtaagccacgta |
100 |
Q |
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| T |
12453576 |
aaatgagtgtacttagttgccacttggcaatgaagatgattacgttccaatccaacatagctttgatggccagcatccaagtagagttgtaagccacgta |
12453675 |
T |
|
| Q |
101 |
tcatcaaacaatctatcacattctcttcttatatcaaccaaccatactcatctcaccttatccttttctcccttttaatccaaatatacaaaactccctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12453676 |
tcatcaaacaatctatcacattctcttcttatatcaaccaaccatactcatctcaccttatccttttctcccttttaatccaaatatacaaaactccctt |
12453775 |
T |
|
| Q |
201 |
accat----taaactctatacacatttcaagaaaccaaggttcattcatatttcatatcatattgttttt |
266 |
Q |
| |
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|||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
12453776 |
cccataacataaactctacacacatttcaacaaaccaaggttcattcatatttcatatcatattgttttt |
12453845 |
T |
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