View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10885_high_2 (Length: 435)
Name: NF10885_high_2
Description: NF10885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10885_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 61 - 334
Target Start/End: Complemental strand, 8058191 - 8057918
Alignment:
| Q |
61 |
ctatctcctctaataataatgataacaattgattcaaagaaannnnnnntaggtttcaaaaattgcctagatcatgattaatcctggcttctacggccac |
160 |
Q |
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| T |
8058191 |
ctatctcctctaataataatgataacaattgattcaaagaaaccccccctaggtttcaaaaattgcctagatcatgattaatcctggcttctacggccac |
8058092 |
T |
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| Q |
161 |
tcatcacactggcgtagacacttgaattcacacatttgaaaggtagttacgaaacccttgtaaacaatttggttttataccgagttgatttttgaaatat |
260 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
8058091 |
tcatcacactggcgtagacacttgaattcacacatttgaaaggtagttacgaaacccttgtaaacaagttggttttataccgagttgatttttgaaatat |
8057992 |
T |
|
| Q |
261 |
gcaaaaacatcaaagttaattgcaacgatgctttatgaaaaatacatgatttatttattctaatttctaacgtt |
334 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8057991 |
gcaaaaacatcaaagttaattgcaacgatgctttatgaaaaatacatgatttatttattctaatttctaacgtt |
8057918 |
T |
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