View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10887_low_5 (Length: 216)
Name: NF10887_low_5
Description: NF10887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10887_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 158305 - 158164
Alignment:
| Q |
64 |
tccactttattattactcaccaactccttgattttattccttttatttcttcctcccaaccttctaacattgaaggttgtaataatcattgattgcaatt |
163 |
Q |
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| T |
158305 |
tccactttattattactcaccaactccttgattttattccttttatttcttcctcccaaccttctaacattgaaggttgtaataatcattgattgcaatt |
158206 |
T |
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| Q |
164 |
tagtctctcccttgctaccttcaatcctacatcaccttcttc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
158205 |
tagtctctcccttgctaccttcaatcctacatcaccttcttc |
158164 |
T |
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